Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc8c11
(774 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein Hsp60... 253 2e-68
SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subu... 66 7e-12
SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit ... 64 2e-11
SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit C... 62 1e-10
SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subuni... 58 2e-09
SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit C... 52 1e-07
SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit ... 50 3e-07
SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit... 49 6e-07
SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit... 44 2e-05
SPAC22G7.06c |ura1||carbamoyl-phosphate synthase |Schizosaccharo... 31 0.18
SPAC2E1P3.05c |||fungal cellulose binding domain protein|Schizos... 27 2.3
SPBC1773.11c |mug89||CDC50 domain protein|Schizosaccharomyces po... 27 2.3
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 27 3.0
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 27 3.0
SPBC1773.14 |arg7||argininosuccinate lyase |Schizosaccharomyces ... 26 5.2
SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces pom... 25 9.1
SPAC13G6.06c |||glycine cleavage complex subunit P|Schizosacchar... 25 9.1
>SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein
Hsp60|Schizosaccharomyces pombe|chr 1|||Manual
Length = 582
Score = 253 bits (619), Expect = 2e-68
Identities = 123/206 (59%), Positives = 162/206 (78%), Gaps = 1/206 (0%)
Frame = +1
Query: 97 RLP-RVVRQTVSLHKSYQLSRFYAKDVRFGADVRALMLQGVDILADAVAVTMGPKGRNVI 273
RLP R+ + + + R YAKD++FG D RA +L GVD LA AV+VT+GPKGRNV+
Sbjct: 11 RLPLRIAGRRIPGRFAVPQVRTYAKDLKFGVDARASLLTGVDTLARAVSVTLGPKGRNVL 70
Query: 274 LEQSWGSPKITKDGVTVAKGVELKDKFQNIGAKLVQNVANNTNEEAGDGTTTATVLARAI 453
++Q +GSPKITKDGVTVA+ V LKDKF+N+GA+LVQ+VA+ TNE AGDGTTTATVL RAI
Sbjct: 71 IDQPFGSPKITKDGVTVARSVSLKDKFENLGARLVQDVASKTNEVAGDGTTTATVLTRAI 130
Query: 454 AKEGFEKISKGANPIEIRRGVMLAVDAVKEKLKGMSKPVTTPEEIAQVATISANGDTAIG 633
E ++ G NP+++RRG+ LAVD V E L+ + +TT EEI+QVATISANGDT IG
Sbjct: 131 FSETVRNVAAGCNPMDLRRGIQLAVDNVVEFLQANKRDITTSEEISQVATISANGDTHIG 190
Query: 634 KLIADAMKKVGRDGVITVKDGKTLTD 711
+L+A AM++VG++GVITVK+G+T++D
Sbjct: 191 ELLAKAMERVGKEGVITVKEGRTISD 216
Score = 36.3 bits (80), Expect = 0.005
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = +2
Query: 716 LKSLRGMKFDRGYISPYFI 772
L+ GMKFDRGYISPYFI
Sbjct: 218 LEVTEGMKFDRGYISPYFI 236
>SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subunit
Cct5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 546
Score = 65.7 bits (153), Expect = 7e-12
Identities = 48/174 (27%), Positives = 82/174 (47%), Gaps = 3/174 (1%)
Frame = +1
Query: 181 GADVRALMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQN 360
G D + +A+ V ++GP+G + IL G +T DG T+ +E++ +
Sbjct: 32 GIDAVKSHILATKTVANIVRTSLGPRGLDKILISPDGEITVTNDGATILDQMEVEHQI-- 89
Query: 361 IGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVDAVK 540
AKL+ ++ + ++E GDGTT VLA A+ ++ I KG +PI I G A
Sbjct: 90 --AKLLVQLSKSQDDEIGDGTTGVVVLAGALLEQAEALIDKGIHPIRIADGYEKACQVAV 147
Query: 541 EKLKGMSKPVT-TPEEIAQV--ATISANGDTAIGKLIADAMKKVGRDGVITVKD 693
+ L +S V +PE + + ++ G + K D + D V++V D
Sbjct: 148 KHLDAISDVVDFSPENTTNLFRSAKTSLGSKVVSK-AHDHFANIAVDAVLSVAD 200
>SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit
Cct4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 527
Score = 64.5 bits (150), Expect = 2e-11
Identities = 46/179 (25%), Positives = 89/179 (49%), Gaps = 4/179 (2%)
Frame = +1
Query: 187 DVRALMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIG 366
+VR + +ADA+ ++GPKG + +++ G +T DG T+ K + +
Sbjct: 19 EVRLSNIMAARSVADAIRTSLGPKGMDKMIQTGKGEVILTNDGATILKHLSVLHP----A 74
Query: 367 AKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEI----RRGVMLAVDA 534
AK++ +++ + EAGDGTT+ +LA ++ + + KG +P I +R VD
Sbjct: 75 AKMLVDLSAAQDVEAGDGTTSVVILAGSMLACAEKLLKKGIHPTVIAESFQRAAGFTVDC 134
Query: 535 VKEKLKGMSKPVTTPEEIAQVATISANGDTAIGKLIADAMKKVGRDGVITVKDGKTLTD 711
+KE ++ ++ E + + AT S N + I ++ + + D V+ V D + T+
Sbjct: 135 MKE--NALAIELSDRESLLRAATTSLN--SKIVSQYSNLLAPIAVDAVLKVIDPRVATN 189
>SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit
Cct2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 61.7 bits (143), Expect = 1e-10
Identities = 38/128 (29%), Positives = 62/128 (48%), Gaps = 1/128 (0%)
Frame = +1
Query: 181 GADVRALMLQGVDILADAVAVTMGPKGRNVILEQ-SWGSPKITKDGVTVAKGVELKDKFQ 357
G + R G + D V T+GPKG + IL+ S G +T DG T+ K + L
Sbjct: 18 GENARLSSFVGAIAVGDLVKSTLGPKGMDKILQSNSSGDIVVTNDGATILKSIAL----D 73
Query: 358 NIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVDAV 537
N AK++ N++ ++E GDGTT+ V A + ++ ++ +P I G +A
Sbjct: 74 NAAAKVLVNISKVQDDEVGDGTTSVCVFAAELLRQAEIMVNAKIHPQVIIDGYRIATKTA 133
Query: 538 KEKLKGMS 561
+ L+ S
Sbjct: 134 IDALRASS 141
>SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subunit
Cct1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 556
Score = 57.6 bits (133), Expect = 2e-09
Identities = 49/173 (28%), Positives = 81/173 (46%), Gaps = 3/173 (1%)
Frame = +1
Query: 181 GADVRALMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQN 360
G DVR + +A+ V ++GP G + +L G +T DG T+ + L D
Sbjct: 19 GEDVRNQNVLATTAIANVVKSSLGPVGLDKMLVDDIGDVTVTNDGATI---LSLLDVEHP 75
Query: 361 IGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAV-DAV 537
G LV+ +A ++E GDGTT+ ++A + + E + +P I G LA+ +AV
Sbjct: 76 AGKVLVE-LAQQQDKEVGDGTTSVVIIAAELLRRANELVKNKIHPTTIITGYRLAIREAV 134
Query: 538 KEKLKGMSKPVTT--PEEIAQVATISANGDTAIGKLIADAMKKVGRDGVITVK 690
K +S V + E + VA S + IG +D + D +++VK
Sbjct: 135 KFMTDVLSCSVDSLGKESLINVAKTSMS-SKIIGN-DSDFFSTMAVDAMLSVK 185
>SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit
Cct6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 51.6 bits (118), Expect = 1e-07
Identities = 39/157 (24%), Positives = 68/157 (43%), Gaps = 1/157 (0%)
Frame = +1
Query: 223 LADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAKLVQNVANNTN 402
L D + +GP G +L G+ K+TKDG + +++ QN A + A +
Sbjct: 28 LQDVLKSNLGPTGTTKMLVDGAGAIKLTKDGKVLLTEMQI----QNPTASCIAKAATAQD 83
Query: 403 EEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVDAVKEKLKGMSKPVTTPE 582
+ GDGTT+ +L + K+ I +G +P I G LA + L
Sbjct: 84 DATGDGTTSVCLLVGELLKQAELYIREGLHPSLISDGFNLAKNEALTFLDSFKTDFEVDR 143
Query: 583 EI-AQVATISANGDTAIGKLIADAMKKVGRDGVITVK 690
E+ VA S + T I + +++ D ++T++
Sbjct: 144 EVLLNVAKTSLS--TKISSKVVESLAPAVVDAILTIR 178
>SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit
Cct7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 558
Score = 50.4 bits (115), Expect = 3e-07
Identities = 30/108 (27%), Positives = 50/108 (46%)
Frame = +1
Query: 229 DAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAKLVQNVANNTNEE 408
D + T+GP G + ++ G I+ DG T+ K +++ AK + ++A + E
Sbjct: 38 DTIRTTLGPLGADKLMVDDRGEVVISNDGATIMKLLDIVHP----AAKTLVDIARAQDAE 93
Query: 409 AGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVDAVKEKLK 552
GDGTT+ V A + +E + G + I RG A K+K
Sbjct: 94 VGDGTTSVVVFAGELLREARTFVEDGVSSHLIIRGYRKAAQLAVNKIK 141
>SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit
Cct3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 528
Score = 49.2 bits (112), Expect = 6e-07
Identities = 37/148 (25%), Positives = 65/148 (43%), Gaps = 1/148 (0%)
Frame = +1
Query: 205 LQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAKLVQN 384
+Q +AD + +GP+ +L GS +T DG + + +E+ AK +
Sbjct: 25 IQAAKAVADVIRTCLGPRAMLKMLLDPVGSVLLTNDGHAILREIEVAHP----AAKSMIE 80
Query: 385 VANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVDAVKEKLKGMSK 564
+A +EE GDGTT+ +LA I + + +P+ + R A++ + ++
Sbjct: 81 LARTQDEEVGDGTTSVIILAGEILAAASPLLDRKIHPVVMIRSFKQALEDALSIIDEITL 140
Query: 565 PVTTPEEIAQVATISANGDTAIG-KLIA 645
PV + I T IG KL+A
Sbjct: 141 PVNVDDNAEMFRLIR----TCIGTKLVA 164
>SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit
Cct8 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 546
Score = 44.4 bits (100), Expect = 2e-05
Identities = 27/110 (24%), Positives = 46/110 (41%)
Frame = +1
Query: 223 LADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAKLVQNVANNTN 402
L++ ++GP G+N I+ +T D T+ + +E+ AKLV +
Sbjct: 38 LSEITRTSLGPNGKNKIVVNHLQQTFLTNDAATIIRELEVIHP----AAKLVVDATQQQE 93
Query: 403 EEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVDAVKEKLK 552
E GD V + + I G P+EI +G +A+ E L+
Sbjct: 94 NELGDAANFVVVFTGELLAKAENMIRMGLTPLEIAKGYEMALSHTMEVLE 143
>SPAC22G7.06c |ura1||carbamoyl-phosphate synthase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2244
Score = 31.1 bits (67), Expect = 0.18
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Frame = +1
Query: 262 RNVILEQSWGSPKITKDGVTVAK-GVELKDKFQNIGAKLVQNVANNTNEEAGDGTTTATV 438
R VI ++ S +T G T G+ELKD+F+ +G K++ T + T +
Sbjct: 542 RKVIKQERPDSIYVTFGGQTALNVGIELKDEFEQLGVKVL-----GTPIDTIITTEDREL 596
Query: 439 LARAIAKEGFEKISKGANPIEIRRGVMLAVD 531
ARA+ E EK +K A+ I + ++ D
Sbjct: 597 FARAM-DEINEKCAKSASASSIEEAIKVSKD 626
>SPAC2E1P3.05c |||fungal cellulose binding domain
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 197
Score = 27.5 bits (58), Expect = 2.3
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = -2
Query: 686 TVITPSLPTFFIASAMSLPIAVSPLADMVATCAISSGVVTGFDIPLSFSLTAS 528
T +T S P+ ++S S+P S ++ V+T + +S +GF LS + T S
Sbjct: 134 TTLTSSSPSA-VSSTTSIPSISSTISSSVSTSSFTSLSSSGFSTVLSSTNTTS 185
>SPBC1773.11c |mug89||CDC50 domain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 396
Score = 27.5 bits (58), Expect = 2.3
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +1
Query: 100 LPRVVRQTVSLHKSYQLSRFYAKDVRFGADVRALMLQGVDILADAV 237
+P V++ + ++ Y+L+ F+ R+ V LQGV + AD V
Sbjct: 140 VPSVLKAPIFIY--YRLTNFFQNHRRYAKSVDEKQLQGVALTADEV 183
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 27.1 bits (57), Expect = 3.0
Identities = 38/170 (22%), Positives = 69/170 (40%), Gaps = 2/170 (1%)
Frame = -2
Query: 671 SLPTFFIASAMSLPIAVSPLADMVATCAISSGVVTGFDIPLSF--SLTASTASITPLLIS 498
S P + S + + +PL+ + + A S+ + PLS S TA++AS TPL
Sbjct: 305 STPLTSVNSTTTTSASSTPLSSV--SSANSTTATSTSSTPLSSVNSTTATSASSTPLTSV 362
Query: 497 IGLAPFDIFSKPSFAIARXXXXXXXXXXXXXXXXXXXTFCTNLAPMFWNLSLSSTPLATV 318
S P ++ T ++ AP + N S S P ++V
Sbjct: 363 NSTTATSASSTPLTSVNSTSATSASSTPLTSANSTTSTSVSSTAPSY-NTS-SVLPTSSV 420
Query: 317 TPSFVIFGDPQDCSKITFLPFGPIVTATASARMSTPCSMRALTSAPNLTS 168
+ + + + + + P + + TA++ STP S T+A + +S
Sbjct: 421 SSTPLSSANSTTATSASSTPLSSVNSTTATSASSTPLSSVNSTTATSASS 470
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 27.1 bits (57), Expect = 3.0
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Frame = -2
Query: 677 TPSLPTFFIASAMSLPIAVSPLADMVATCAISSGVVT--GFDIPLSFSLTASTASI 516
TPS + I+S+ + + S L+ ++T ISS + T IP S +L +S++S+
Sbjct: 629 TPSTSSLMISSSSIISGSSSILSSSISTIPISSSLSTYSSSVIPSSSTLVSSSSSL 684
>SPBC1773.14 |arg7||argininosuccinate lyase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 461
Score = 26.2 bits (55), Expect = 5.2
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = -2
Query: 617 PLADMVATCAISSGVVTGFDIPLSFSLTASTASITPLLISIGLAPF 480
PL D T + S ++TG L+ + T S+TP L++ LA +
Sbjct: 332 PLFDAFKTVSDSLQILTGVVSTLTINPTKIAESLTPDLLATDLAEY 377
>SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 772
Score = 25.4 bits (53), Expect = 9.1
Identities = 15/55 (27%), Positives = 23/55 (41%)
Frame = -2
Query: 344 LSSTPLATVTPSFVIFGDPQDCSKITFLPFGPIVTATASARMSTPCSMRALTSAP 180
LSS P + V G SK+ P + + +SA + C+ +L S P
Sbjct: 12 LSSAPTKPIASGSVATGIDSMPSKVDITPCDLLENSKSSAPLFVECNQESLHSIP 66
>SPAC13G6.06c |||glycine cleavage complex subunit
P|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1017
Score = 25.4 bits (53), Expect = 9.1
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -1
Query: 282 LFQNNVSTFWTHCNGYGIS*DVNALQHESSYISAKPHIFSI 160
++ N +S T +G+GI +++ + E SAK H+F I
Sbjct: 225 IYPNTLSVLRTRASGFGIKIELDNITPELITKSAK-HVFGI 264
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,927,081
Number of Sequences: 5004
Number of extensions: 58144
Number of successful extensions: 195
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 182
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 187
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 373338084
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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