Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc8c11
         (774 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50479-1|AAA93478.1|  151|Anopheles gambiae protein ( Anopheles ...    24   4.5  
EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger pr...    23   7.9  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    23   7.9  

>U50479-1|AAA93478.1|  151|Anopheles gambiae protein ( Anopheles
           gambiae putativeribosomal protein S13 mRNA, complete
           cds. ).
          Length = 151

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
 Frame = +1

Query: 475 ISKGANPIE--IRRGVMLAVDAVKEKLKGMSKPVTTPEEI 588
           ISK A P    +   + L+ + VKE++K + K   TP +I
Sbjct: 11  ISKSALPYRRSVPSWLKLSAEDVKEQIKKLGKKGMTPSQI 50


>EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger
           protein.
          Length = 993

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -2

Query: 350 LSLSSTPLATVTPSFVIFGDP 288
           L++ S+P A   PSF+IF  P
Sbjct: 933 LAVKSSPFAMAFPSFLIFMVP 953


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +1

Query: 568 VTTPEEIAQVATISANG 618
           V TPEE+ Q  T++ +G
Sbjct: 256 VATPEELTQAITVACDG 272


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 734,123
Number of Sequences: 2352
Number of extensions: 14421
Number of successful extensions: 32
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80665782
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)