Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc8c09
         (726 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070538-1|AAL48009.1|  223|Drosophila melanogaster LD21194p pro...   289   2e-78
AE013599-208|AAM70816.1|  223|Drosophila melanogaster CG3403-PA ...   289   2e-78
AY061520-1|AAL29068.1|  219|Drosophila melanogaster LD47553p pro...    34   0.17 
AE014297-3152|AAF55993.2|  219|Drosophila melanogaster CG13852-P...    34   0.17 
L38909-1|AAB48934.1|  578|Drosophila melanogaster moesin protein.      30   2.8  
AE014298-1241|AAF46418.1|  512|Drosophila melanogaster CG10701-P...    30   2.8  
AE014298-1240|AAF46417.1|  640|Drosophila melanogaster CG10701-P...    30   2.8  
AE014298-1239|AAF46416.1|  649|Drosophila melanogaster CG10701-P...    30   2.8  
AE014298-1238|AAS65299.1|  578|Drosophila melanogaster CG10701-P...    30   2.8  

>AY070538-1|AAL48009.1|  223|Drosophila melanogaster LD21194p
           protein.
          Length = 223

 Score =  289 bits (710), Expect = 2e-78
 Identities = 128/147 (87%), Positives = 135/147 (91%)
 Frame = +3

Query: 285 EMTDGVQILRRNRPGTKAKDFCRWPDEPFEEMDSTLAVQQFIQQTIRRDPSNLEAILKMP 464
           +M DG  ILRRNRPGTK+KDFCRWPDEP EEMDSTLAVQQ+IQQ I+RDPSN+E IL MP
Sbjct: 2   KMADGSTILRRNRPGTKSKDFCRWPDEPLEEMDSTLAVQQYIQQLIKRDPSNVELILTMP 61

Query: 465 EVLDEGVWKYEHLRQFCMELNGLAVRLQNECKPETCTQMTATEQWIFLCAAHKTPKECPA 644
           E  DEGVWKYEHLRQFCMELNGLAVRLQ EC P TCTQMTAT+QWIFLCAAHKTPKECPA
Sbjct: 62  EAQDEGVWKYEHLRQFCMELNGLAVRLQKECSPSTCTQMTATDQWIFLCAAHKTPKECPA 121

Query: 645 IDYTRHTLDGAACLLNSNKYFPSRVNI 725
           IDYTRHTLDGAACLLNSNKYFPSRV+I
Sbjct: 122 IDYTRHTLDGAACLLNSNKYFPSRVSI 148


>AE013599-208|AAM70816.1|  223|Drosophila melanogaster CG3403-PA
           protein.
          Length = 223

 Score =  289 bits (710), Expect = 2e-78
 Identities = 128/147 (87%), Positives = 135/147 (91%)
 Frame = +3

Query: 285 EMTDGVQILRRNRPGTKAKDFCRWPDEPFEEMDSTLAVQQFIQQTIRRDPSNLEAILKMP 464
           +M DG  ILRRNRPGTK+KDFCRWPDEP EEMDSTLAVQQ+IQQ I+RDPSN+E IL MP
Sbjct: 2   KMADGSTILRRNRPGTKSKDFCRWPDEPLEEMDSTLAVQQYIQQLIKRDPSNVELILTMP 61

Query: 465 EVLDEGVWKYEHLRQFCMELNGLAVRLQNECKPETCTQMTATEQWIFLCAAHKTPKECPA 644
           E  DEGVWKYEHLRQFCMELNGLAVRLQ EC P TCTQMTAT+QWIFLCAAHKTPKECPA
Sbjct: 62  EAQDEGVWKYEHLRQFCMELNGLAVRLQKECSPSTCTQMTATDQWIFLCAAHKTPKECPA 121

Query: 645 IDYTRHTLDGAACLLNSNKYFPSRVNI 725
           IDYTRHTLDGAACLLNSNKYFPSRV+I
Sbjct: 122 IDYTRHTLDGAACLLNSNKYFPSRVSI 148


>AY061520-1|AAL29068.1|  219|Drosophila melanogaster LD47553p
           protein.
          Length = 219

 Score = 34.3 bits (75), Expect = 0.17
 Identities = 24/99 (24%), Positives = 42/99 (42%), Gaps = 3/99 (3%)
 Frame = +3

Query: 438 NLEAILKMPEVLDEGVWKYEHLRQFCMELNGLAVRLQNECKPETCTQMTATEQWIFLCA- 614
           NL   + +P+  D   W   +   F  ++N L   +   C  ETC  M+A  ++ +  A 
Sbjct: 40  NLRNAVALPDGEDLNEWVAVNTVDFFNQINMLYGTITEFCTEETCGIMSAGPKYEYHWAD 99

Query: 615 --AHKTPKECPAIDYTRHTLDGAACLLNSNKYFPSRVNI 725
               K P +C A  Y  + +      L+    FPS++ +
Sbjct: 100 GLTVKKPIKCSAPKYIDYLMTWVQDQLDDETLFPSKIGV 138


>AE014297-3152|AAF55993.2|  219|Drosophila melanogaster CG13852-PA
           protein.
          Length = 219

 Score = 34.3 bits (75), Expect = 0.17
 Identities = 24/99 (24%), Positives = 42/99 (42%), Gaps = 3/99 (3%)
 Frame = +3

Query: 438 NLEAILKMPEVLDEGVWKYEHLRQFCMELNGLAVRLQNECKPETCTQMTATEQWIFLCA- 614
           NL   + +P+  D   W   +   F  ++N L   +   C  ETC  M+A  ++ +  A 
Sbjct: 40  NLRNAVALPDGEDLNEWVAVNTVDFFNQINMLYGTITEFCTEETCGIMSAGPKYEYHWAD 99

Query: 615 --AHKTPKECPAIDYTRHTLDGAACLLNSNKYFPSRVNI 725
               K P +C A  Y  + +      L+    FPS++ +
Sbjct: 100 GLTVKKPIKCSAPKYIDYLMTWVQDQLDDETLFPSKIGV 138


>L38909-1|AAB48934.1|  578|Drosophila melanogaster moesin protein.
          Length = 578

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 38/160 (23%), Positives = 74/160 (46%), Gaps = 9/160 (5%)
 Frame = +3

Query: 180 EVKHNSNKCRRNYQRLVNIRTSLSKQKYLFAIPPKEMTDGVQILRRNRPGTKAKDFCRWP 359
           E K+   + R   Q  +  R    K++  +    K+M + ++  R  R   +A+D  R  
Sbjct: 312 EEKNAKQQEREKLQLALAARERAEKKQQEYEDRLKQMQEDME--RSQRDLLEAQDMIRRL 369

Query: 360 DEPFEEM----DSTLAVQQFIQQTIRR--DPSNLEAILKMPEVLDEGVWKYEHLRQFCME 521
           +E  +++    D     Q+ +Q  ++R  +  N+EA+ K+ ++ +E + K   +++   E
Sbjct: 370 EEQLKQLQAAKDELELRQKELQAMLQRLEEAKNMEAVEKL-KLEEEIMAKQMEVQRIQDE 428

Query: 522 LNGL---AVRLQNECKPETCTQMTATEQWIFLCAAHKTPK 632
           +N       RLQ+E +     Q+ A E    L AA  TP+
Sbjct: 429 VNAKDEETKRLQDEVEDARRKQVIAAEAAAALLAASTTPQ 468


>AE014298-1241|AAF46418.1|  512|Drosophila melanogaster CG10701-PC,
           isoform C protein.
          Length = 512

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 38/160 (23%), Positives = 74/160 (46%), Gaps = 9/160 (5%)
 Frame = +3

Query: 180 EVKHNSNKCRRNYQRLVNIRTSLSKQKYLFAIPPKEMTDGVQILRRNRPGTKAKDFCRWP 359
           E K+   + R   Q  +  R    K++  +    K+M + ++  R  R   +A+D  R  
Sbjct: 246 EEKNAKQQEREKLQLALAARERAEKKQQEYEDRLKQMQEDME--RSQRDLLEAQDMIRRL 303

Query: 360 DEPFEEM----DSTLAVQQFIQQTIRR--DPSNLEAILKMPEVLDEGVWKYEHLRQFCME 521
           +E  +++    D     Q+ +Q  ++R  +  N+EA+ K+ ++ +E + K   +++   E
Sbjct: 304 EEQLKQLQAAKDELELRQKELQAMLQRLEEAKNMEAVEKL-KLEEEIMAKQMEVQRIQDE 362

Query: 522 LNGL---AVRLQNECKPETCTQMTATEQWIFLCAAHKTPK 632
           +N       RLQ+E +     Q+ A E    L AA  TP+
Sbjct: 363 VNAKDEETKRLQDEVEDARRKQVIAAEAAAALLAASTTPQ 402


>AE014298-1240|AAF46417.1|  640|Drosophila melanogaster CG10701-PA,
           isoform A protein.
          Length = 640

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 38/160 (23%), Positives = 74/160 (46%), Gaps = 9/160 (5%)
 Frame = +3

Query: 180 EVKHNSNKCRRNYQRLVNIRTSLSKQKYLFAIPPKEMTDGVQILRRNRPGTKAKDFCRWP 359
           E K+   + R   Q  +  R    K++  +    K+M + ++  R  R   +A+D  R  
Sbjct: 374 EEKNAKQQEREKLQLALAARERAEKKQQEYEDRLKQMQEDME--RSQRDLLEAQDMIRRL 431

Query: 360 DEPFEEM----DSTLAVQQFIQQTIRR--DPSNLEAILKMPEVLDEGVWKYEHLRQFCME 521
           +E  +++    D     Q+ +Q  ++R  +  N+EA+ K+ ++ +E + K   +++   E
Sbjct: 432 EEQLKQLQAAKDELELRQKELQAMLQRLEEAKNMEAVEKL-KLEEEIMAKQMEVQRIQDE 490

Query: 522 LNGL---AVRLQNECKPETCTQMTATEQWIFLCAAHKTPK 632
           +N       RLQ+E +     Q+ A E    L AA  TP+
Sbjct: 491 VNAKDEETKRLQDEVEDARRKQVIAAEAAAALLAASTTPQ 530


>AE014298-1239|AAF46416.1|  649|Drosophila melanogaster CG10701-PB,
           isoform B protein.
          Length = 649

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 38/160 (23%), Positives = 74/160 (46%), Gaps = 9/160 (5%)
 Frame = +3

Query: 180 EVKHNSNKCRRNYQRLVNIRTSLSKQKYLFAIPPKEMTDGVQILRRNRPGTKAKDFCRWP 359
           E K+   + R   Q  +  R    K++  +    K+M + ++  R  R   +A+D  R  
Sbjct: 383 EEKNAKQQEREKLQLALAARERAEKKQQEYEDRLKQMQEDME--RSQRDLLEAQDMIRRL 440

Query: 360 DEPFEEM----DSTLAVQQFIQQTIRR--DPSNLEAILKMPEVLDEGVWKYEHLRQFCME 521
           +E  +++    D     Q+ +Q  ++R  +  N+EA+ K+ ++ +E + K   +++   E
Sbjct: 441 EEQLKQLQAAKDELELRQKELQAMLQRLEEAKNMEAVEKL-KLEEEIMAKQMEVQRIQDE 499

Query: 522 LNGL---AVRLQNECKPETCTQMTATEQWIFLCAAHKTPK 632
           +N       RLQ+E +     Q+ A E    L AA  TP+
Sbjct: 500 VNAKDEETKRLQDEVEDARRKQVIAAEAAAALLAASTTPQ 539


>AE014298-1238|AAS65299.1|  578|Drosophila melanogaster CG10701-PJ,
           isoform J protein.
          Length = 578

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 38/160 (23%), Positives = 74/160 (46%), Gaps = 9/160 (5%)
 Frame = +3

Query: 180 EVKHNSNKCRRNYQRLVNIRTSLSKQKYLFAIPPKEMTDGVQILRRNRPGTKAKDFCRWP 359
           E K+   + R   Q  +  R    K++  +    K+M + ++  R  R   +A+D  R  
Sbjct: 312 EEKNAKQQEREKLQLALAARERAEKKQQEYEDRLKQMQEDME--RSQRDLLEAQDMIRRL 369

Query: 360 DEPFEEM----DSTLAVQQFIQQTIRR--DPSNLEAILKMPEVLDEGVWKYEHLRQFCME 521
           +E  +++    D     Q+ +Q  ++R  +  N+EA+ K+ ++ +E + K   +++   E
Sbjct: 370 EEQLKQLQAAKDELELRQKELQAMLQRLEEAKNMEAVEKL-KLEEEIMAKQMEVQRIQDE 428

Query: 522 LNGL---AVRLQNECKPETCTQMTATEQWIFLCAAHKTPK 632
           +N       RLQ+E +     Q+ A E    L AA  TP+
Sbjct: 429 VNAKDEETKRLQDEVEDARRKQVIAAEAAAALLAASTTPQ 468


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,453,855
Number of Sequences: 53049
Number of extensions: 705752
Number of successful extensions: 1911
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1869
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1911
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3252477558
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)