Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc8c06
(736 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5TA45 Cluster: Integrator complex subunit 11; n=29; Eu... 290 2e-77
UniRef50_Q9U3K2 Cluster: Putative uncharacterized protein; n=2; ... 263 3e-69
UniRef50_Q5TA51 Cluster: Cleavage and polyadenylation specific f... 260 2e-68
UniRef50_A6NEN7 Cluster: Uncharacterized protein CPSF3L; n=16; T... 260 3e-68
UniRef50_Q5TA44 Cluster: Cleavage and polyadenylation specific f... 240 2e-62
UniRef50_Q8GUU3 Cluster: FEG protein; n=8; Magnoliophyta|Rep: FE... 210 4e-53
UniRef50_Q5CRW9 Cluster: CPSF metallobeta-lactamase; n=2; Crypto... 170 3e-41
UniRef50_Q8SUE4 Cluster: Putative uncharacterized protein ECU10_... 137 2e-31
UniRef50_A4S2M5 Cluster: Predicted protein; n=4; Viridiplantae|R... 126 7e-28
UniRef50_Q9UKF6 Cluster: Cleavage and polyadenylation specificit... 124 2e-27
UniRef50_Q86A79 Cluster: Similar to Homo sapiens (Human). Cleava... 122 7e-27
UniRef50_A2FCF8 Cluster: RNA-metabolising metallo-beta-lactamase... 121 2e-26
UniRef50_UPI0001555813 Cluster: PREDICTED: hypothetical protein,... 120 3e-26
UniRef50_A0BGT5 Cluster: Chromosome undetermined scaffold_106, w... 120 3e-26
UniRef50_Q236M0 Cluster: RNA-metabolising metallo-beta-lactamase... 119 6e-26
UniRef50_A0CN06 Cluster: Chromosome undetermined scaffold_22, wh... 117 3e-25
UniRef50_Q95PY8 Cluster: Putative uncharacterized protein; n=2; ... 116 5e-25
UniRef50_Q4Q2K1 Cluster: Cleavage and polyadenylation specificit... 116 8e-25
UniRef50_Q226C1 Cluster: Putative FEG protein; n=2; Tetrahymena ... 113 3e-24
UniRef50_Q4TC63 Cluster: Chromosome undetermined SCAF7053, whole... 109 9e-23
UniRef50_Q4PEJ3 Cluster: Endoribonuclease YSH1; n=6; Fungi/Metaz... 108 2e-22
UniRef50_O13794 Cluster: Endoribonuclease ysh1; n=2; Ascomycota|... 107 2e-22
UniRef50_Q06224 Cluster: Endoribonuclease YSH1; n=10; Fungi/Meta... 105 1e-21
UniRef50_Q58633 Cluster: Uncharacterized protein MJ1236; n=16; E... 104 3e-21
UniRef50_Q5CPX2 Cluster: Cleavage and polyadenylation specifity ... 101 1e-20
UniRef50_UPI00015BA9DD Cluster: beta-lactamase domain protein; n... 101 2e-20
UniRef50_Q8TW11 Cluster: Predicted metal-dependent RNase, consis... 101 2e-20
UniRef50_Q97AZ6 Cluster: Cleavage and polyadenylation specificit... 100 3e-20
UniRef50_Q5KCZ0 Cluster: Endoribonuclease YSH1; n=2; cellular or... 100 3e-20
UniRef50_A2D958 Cluster: RNA-metabolising metallo-beta-lactamase... 100 7e-20
UniRef50_A1RWY8 Cluster: Beta-lactamase domain protein; n=1; The... 100 7e-20
UniRef50_Q4N0H3 Cluster: Putative uncharacterized protein; n=2; ... 85 1e-18
UniRef50_Q8ZYD9 Cluster: MRNA 3'-end processing factor, conjectu... 94 3e-18
UniRef50_Q6BMW3 Cluster: Endoribonuclease YSH1; n=2; Saccharomyc... 94 3e-18
UniRef50_A7AWH8 Cluster: RNA-metabolising metallo-beta-lactamase... 87 6e-18
UniRef50_Q4UBM2 Cluster: Cleavage and polyadenylation specificty... 93 6e-18
UniRef50_A5N1D0 Cluster: Putative uncharacterized protein; n=1; ... 93 8e-18
UniRef50_A6QXP5 Cluster: Putative uncharacterized protein; n=1; ... 93 8e-18
UniRef50_A1RTJ6 Cluster: Beta-lactamase domain protein; n=1; Pyr... 92 1e-17
UniRef50_A5BWZ3 Cluster: Putative uncharacterized protein; n=1; ... 91 3e-17
UniRef50_Q5BEP0 Cluster: Endoribonuclease ysh1; n=15; Pezizomyco... 90 5e-17
UniRef50_Q74MJ3 Cluster: NEQ076; n=1; Nanoarchaeum equitans|Rep:... 90 6e-17
UniRef50_UPI000049831F Cluster: cleavage and polyadenylation spe... 89 1e-16
UniRef50_Q4S6C2 Cluster: Chromosome 9 SCAF14729, whole genome sh... 87 4e-16
UniRef50_A5KD85 Cluster: Cleavage and polyadenylation specifity ... 86 7e-16
UniRef50_A0RXV0 Cluster: Cleavage and polyadenylation specificit... 86 7e-16
UniRef50_Q9HS54 Cluster: MRNA 3'-end processing factor homolog; ... 85 2e-15
UniRef50_Q9YEQ9 Cluster: Putative exonuclease; n=1; Aeropyrum pe... 83 5e-15
UniRef50_Q9UXE8 Cluster: MRNA 3'-end polyadenylation factor; n=6... 83 5e-15
UniRef50_Q72GW5 Cluster: Cleavage and polyadenylation specificit... 82 1e-14
UniRef50_Q7RRQ3 Cluster: Cleavage and polyadenylation specificit... 82 1e-14
UniRef50_Q18IP5 Cluster: Predicted metal-dependent RNase, consis... 80 5e-14
UniRef50_A7QCN8 Cluster: Chromosome chr12 scaffold_78, whole gen... 79 1e-13
UniRef50_A7DQ83 Cluster: Beta-lactamase domain protein; n=1; Can... 79 1e-13
UniRef50_Q0LL72 Cluster: Beta-lactamase-like; n=3; Herpetosiphon... 78 2e-13
UniRef50_A4XI93 Cluster: Beta-lactamase domain protein; n=1; Cal... 78 2e-13
UniRef50_A5K7P0 Cluster: RNA-metabolising metallo-beta-lactamase... 78 2e-13
UniRef50_Q5ZWR4 Cluster: Metallo-beta lactamase family; n=4; Leg... 77 3e-13
UniRef50_A4CGY6 Cluster: Putative uncharacterized protein; n=4; ... 77 3e-13
UniRef50_Q9RZ85 Cluster: Cleavage and polyadenylation specificit... 77 6e-13
UniRef50_Q6MLH4 Cluster: Predicted exonuclease of the beta-lacta... 76 8e-13
UniRef50_Q7QRM8 Cluster: GLP_171_24040_22178; n=1; Giardia lambl... 76 1e-12
UniRef50_UPI00004992E1 Cluster: cleavage and polyadenylation spe... 75 1e-12
UniRef50_O77371 Cluster: Cleavage and polyadenylation specificit... 75 1e-12
UniRef50_A3ERC5 Cluster: Putative RNA-processing exonuclease; n=... 75 2e-12
UniRef50_A6C193 Cluster: Exonuclease of the beta-lactamase fold ... 74 3e-12
UniRef50_Q73MR4 Cluster: Metallo-beta-lactamase family protein; ... 72 1e-11
UniRef50_Q0HMU8 Cluster: RNA-metabolizing metallo-beta-lactamase... 72 2e-11
UniRef50_A6VTF2 Cluster: RNA-metabolising metallo-beta-lactamase... 72 2e-11
UniRef50_Q2RJ88 Cluster: RNA-metabolising metallo-beta-lactamase... 71 2e-11
UniRef50_Q15V20 Cluster: RNA-metabolising metallo-beta-lactamase... 71 2e-11
UniRef50_Q7QYP3 Cluster: GLP_393_23867_26140; n=1; Giardia lambl... 71 3e-11
UniRef50_Q2LYC2 Cluster: Metallo-beta-lactamase protein; n=6; De... 70 5e-11
UniRef50_A5KKJ4 Cluster: Putative uncharacterized protein; n=1; ... 70 7e-11
UniRef50_Q3ZY44 Cluster: Metallo-beta-lactamase family protein; ... 69 9e-11
UniRef50_UPI00015BD54C Cluster: UPI00015BD54C related cluster; n... 69 1e-10
UniRef50_A5ZRP6 Cluster: Putative uncharacterized protein; n=4; ... 69 1e-10
UniRef50_A1S0I1 Cluster: Beta-lactamase domain protein; n=1; The... 69 2e-10
UniRef50_O17403 Cluster: Probable cleavage and polyadenylation s... 69 2e-10
UniRef50_UPI00015BB212 Cluster: beta-lactamase domain protein; n... 68 3e-10
UniRef50_Q55BS1 Cluster: Putative uncharacterized protein; n=1; ... 68 3e-10
UniRef50_Q4AMZ9 Cluster: Beta-lactamase-like:RNA-metabolising me... 67 4e-10
UniRef50_Q9LKF9 Cluster: Cleavage and polyadenylation specificit... 67 4e-10
UniRef50_Q194D1 Cluster: Beta-lactamase-like; n=3; Clostridia|Re... 67 5e-10
UniRef50_Q3AAG6 Cluster: Metallo-beta-lactamase family protein; ... 66 6e-10
UniRef50_A4VJP5 Cluster: Metallo-beta-lactamase superfamily prot... 66 6e-10
UniRef50_Q60355 Cluster: Uncharacterized protein MJ0047; n=6; Me... 66 6e-10
UniRef50_Q7UMQ3 Cluster: Cleavage and polyadenylation specifity ... 66 8e-10
UniRef50_A3HWA3 Cluster: Metallo-beta-lactamase family protein; ... 66 8e-10
UniRef50_Q9YFR8 Cluster: Putative exonuclease; n=1; Aeropyrum pe... 66 8e-10
UniRef50_Q8ZTD5 Cluster: MRNA 3'-end processing factor, conjectu... 66 1e-09
UniRef50_Q8KET4 Cluster: Metallo-beta-lactamase superfamily prot... 65 1e-09
UniRef50_A1RXC5 Cluster: Beta-lactamase domain protein; n=1; The... 65 1e-09
UniRef50_A6E886 Cluster: Metallo-beta-lactamase superfamily prot... 65 2e-09
UniRef50_A4J2E1 Cluster: Beta-lactamase domain protein; n=1; Des... 65 2e-09
UniRef50_Q11BH9 Cluster: Beta-lactamase-like; n=6; Proteobacteri... 64 3e-09
UniRef50_A7CRQ7 Cluster: Beta-lactamase domain protein; n=1; Opi... 64 3e-09
UniRef50_A2EDT7 Cluster: Putative uncharacterized protein; n=1; ... 64 3e-09
UniRef50_A7DPN0 Cluster: Beta-lactamase domain protein; n=1; Can... 64 3e-09
UniRef50_Q8RBU2 Cluster: Predicted exonuclease of the beta-lacta... 64 3e-09
UniRef50_Q57626 Cluster: Uncharacterized protein MJ0162; n=6; Me... 64 3e-09
UniRef50_Q896M4 Cluster: Cleavage and polyadenylation specificit... 64 4e-09
UniRef50_A0JWK6 Cluster: Beta-lactamase domain protein; n=2; Bac... 63 8e-09
UniRef50_Q1PVS7 Cluster: Putative uncharacterized protein; n=1; ... 62 1e-08
UniRef50_A0Q181 Cluster: Metallo-beta-lactamase family protein, ... 62 1e-08
UniRef50_A0RY50 Cluster: Exonuclease of the beta-lactamase fold;... 62 1e-08
UniRef50_A7HPZ1 Cluster: Beta-lactamase domain protein; n=2; Alp... 62 1e-08
UniRef50_Q1NVJ9 Cluster: Beta-lactamase-like:RNA-metabolising me... 62 2e-08
UniRef50_Q980D0 Cluster: MRNA 3'-end processing factor, putative... 62 2e-08
UniRef50_A6Q9T8 Cluster: RNA-metabolising metallo-beta-lactamase... 61 2e-08
UniRef50_A3I563 Cluster: Zn-dependent hydrolase, beta-lactamase ... 61 2e-08
UniRef50_Q2G7Y1 Cluster: Beta-lactamase-like protein; n=1; Novos... 60 6e-08
UniRef50_Q11PK2 Cluster: Metallo-beta-lactamase superfamily prot... 60 6e-08
UniRef50_Q8WPK6 Cluster: Similar to cleavage and polyadenylation... 60 6e-08
UniRef50_Q5WCW7 Cluster: Beta-lactamase superfamily Zn-dependent... 60 7e-08
UniRef50_Q023M0 Cluster: Beta-lactamase domain protein; n=1; Sol... 60 7e-08
UniRef50_Q6N2A1 Cluster: Beta-lactamase-like; n=12; Rhizobiales|... 59 1e-07
UniRef50_Q5QU60 Cluster: Predicted exonuclease of the beta-lacta... 59 1e-07
UniRef50_A3WMD7 Cluster: Predicted exonuclease of the beta-lacta... 59 1e-07
UniRef50_A1SFD7 Cluster: Beta-lactamase domain protein; n=2; Bac... 59 1e-07
UniRef50_Q1IJR0 Cluster: Beta-lactamase-like; n=1; Acidobacteria... 58 2e-07
UniRef50_O87142 Cluster: WbfZ protein; n=32; Vibrionaceae|Rep: W... 58 2e-07
UniRef50_Q9V3D6 Cluster: Probable cleavage and polyadenylation s... 58 2e-07
UniRef50_Q74C32 Cluster: Metallo-beta-lactamase family protein; ... 58 3e-07
UniRef50_Q12E81 Cluster: Beta-lactamase-like; n=14; Proteobacter... 57 4e-07
UniRef50_Q9AA00 Cluster: Metallo-beta-lactamase family protein; ... 57 5e-07
UniRef50_Q8DE34 Cluster: Predicted exonuclease of the beta-lacta... 57 5e-07
UniRef50_Q0EST3 Cluster: Beta-lactamase-like; n=2; Thermoanaerob... 57 5e-07
UniRef50_A0LI39 Cluster: Beta-lactamase domain protein; n=1; Syn... 57 5e-07
UniRef50_A5BWD3 Cluster: Putative uncharacterized protein; n=3; ... 56 9e-07
UniRef50_A1ID10 Cluster: Metallo-beta-lactamase family protein; ... 55 2e-06
UniRef50_A4RR19 Cluster: Predicted protein; n=1; Ostreococcus lu... 55 2e-06
UniRef50_A2BK26 Cluster: Putative exoribonuclease; n=1; Hyperthe... 55 2e-06
UniRef50_A0JUX7 Cluster: Beta-lactamase domain protein; n=25; Ba... 54 3e-06
UniRef50_Q1B028 Cluster: Beta-lactamase-like protein; n=1; Rubro... 54 4e-06
UniRef50_Q07ZA5 Cluster: Beta-lactamase domain protein; n=3; Alt... 54 4e-06
UniRef50_Q01GI5 Cluster: Polyadenylation cleavage/specificity fa... 54 4e-06
UniRef50_Q0W8H2 Cluster: MRNA 3-end processing factor; n=5; Eury... 54 4e-06
UniRef50_Q8RAH0 Cluster: Predicted hydrolase of the metallo-beta... 54 5e-06
UniRef50_A4XTF4 Cluster: Beta-lactamase domain protein; n=12; Ga... 54 5e-06
UniRef50_A3DMW0 Cluster: Beta-lactamase domain protein; n=1; Sta... 54 5e-06
UniRef50_A6PE29 Cluster: Beta-lactamase domain protein; n=1; She... 53 6e-06
UniRef50_Q2AEK6 Cluster: Beta-lactamase-like:RNA-metabolising me... 53 8e-06
UniRef50_Q2GCU7 Cluster: Metallo-beta-lactamase family, beta-CAS... 52 1e-05
UniRef50_Q2S180 Cluster: Ysh1p: subunit of polyadenylation facto... 52 2e-05
UniRef50_P56185 Cluster: UPF0036 protein HP_1430; n=26; Epsilonp... 51 3e-05
UniRef50_A7H6H0 Cluster: Beta-lactamase domain protein; n=2; Ana... 51 3e-05
UniRef50_Q9FMW0 Cluster: Genomic DNA, chromosome 5, P1 clone:MLE... 51 3e-05
UniRef50_A6Q3H4 Cluster: RNA-metabolising metallo-beta-lactamase... 50 4e-05
UniRef50_A5URN4 Cluster: Beta-lactamase domain protein; n=5; Chl... 50 4e-05
UniRef50_Q6L0H4 Cluster: MRNA 3'-end processing factor; n=4; The... 50 4e-05
UniRef50_A7PHF3 Cluster: Chromosome chr17 scaffold_16, whole gen... 50 6e-05
UniRef50_Q0C1C8 Cluster: Metallo-beta-lactamase family protein; ... 49 1e-04
UniRef50_A1ZG78 Cluster: Exonuclease of the beta-lactamase fold ... 49 1e-04
UniRef50_Q4S732 Cluster: Chromosome 14 SCAF14723, whole genome s... 48 2e-04
UniRef50_Q605H9 Cluster: Metallo-beta-lactamase family protein; ... 48 2e-04
UniRef50_Q1DC87 Cluster: Metallo-beta-lactamase family protein; ... 48 2e-04
UniRef50_A7RPX1 Cluster: Predicted protein; n=1; Nematostella ve... 48 2e-04
UniRef50_A1I7A4 Cluster: Putative uncharacterized protein; n=1; ... 48 2e-04
UniRef50_Q9P2I0 Cluster: Cleavage and polyadenylation specificit... 48 2e-04
UniRef50_Q3LW64 Cluster: Regulator of transcription that contain... 48 3e-04
UniRef50_Q1IPV7 Cluster: Beta-lactamase-like precursor; n=2; Aci... 47 4e-04
UniRef50_Q1GQ91 Cluster: Beta-lactamase-like protein; n=43; Bact... 47 4e-04
UniRef50_Q04EG7 Cluster: Predicted hydrolase of the metallo-beta... 47 4e-04
UniRef50_Q5NLC0 Cluster: Metallo-beta-lactamase hydrolase subuni... 47 6e-04
UniRef50_Q5GSG7 Cluster: Predicted hydrolase of the metallo-beta... 47 6e-04
UniRef50_A4EC75 Cluster: Putative uncharacterized protein; n=1; ... 47 6e-04
UniRef50_A1VFA6 Cluster: Beta-lactamase domain protein; n=4; Des... 47 6e-04
UniRef50_P54122 Cluster: UPF0036 protein Cgl1970/cg2160; n=31; A... 47 6e-04
UniRef50_Q9NV88 Cluster: Integrator complex subunit 9; n=41; Eum... 47 6e-04
UniRef50_Q3UGU6 Cluster: Melanocyte cDNA, RIKEN full-length enri... 46 7e-04
UniRef50_A5TU13 Cluster: Metal-dependent hydrolase; n=3; Fusobac... 46 7e-04
UniRef50_A3ZTP5 Cluster: Metallo-beta-lactamase family protein; ... 46 7e-04
UniRef50_Q2YZG4 Cluster: Predicted exonuclease of the beta-lacta... 46 0.001
UniRef50_O29718 Cluster: MRNA 3'-end processing factor, putative... 46 0.001
UniRef50_A4SYL2 Cluster: RNA-metabolising metallo-beta-lactamase... 44 0.004
UniRef50_Q5V0H4 Cluster: MRNA 3'-end processing factor; n=4; Hal... 44 0.005
UniRef50_Q6MTU5 Cluster: CONSERVED HYPOTEHTICAL PROTEIN; n=3; Mo... 43 0.007
UniRef50_Q2LTE7 Cluster: Metallo-beta-lactamase superfamily; n=1... 43 0.007
UniRef50_A7D2T2 Cluster: Beta-lactamase domain protein; n=1; Hal... 43 0.007
UniRef50_Q50EJ8 Cluster: Metallo-beta-lactamase superfamily hydr... 42 0.012
UniRef50_A6VTQ0 Cluster: Beta-lactamase domain protein; n=9; Pro... 42 0.016
UniRef50_UPI000049A022 Cluster: cleavage and polyadenylation spe... 42 0.021
UniRef50_Q2SRM2 Cluster: Metallo-beta-lactamase superfamily prot... 42 0.021
UniRef50_Q1AW46 Cluster: Putative uncharacterized protein; n=1; ... 42 0.021
UniRef50_Q54SH0 Cluster: Putative uncharacterized protein; n=1; ... 42 0.021
UniRef50_Q4PAM2 Cluster: Putative uncharacterized protein; n=1; ... 42 0.021
UniRef50_P47385 Cluster: UPF0036 protein MG139; n=4; Mycoplasma|... 42 0.021
UniRef50_A7Q525 Cluster: Chromosome undetermined scaffold_51, wh... 41 0.027
UniRef50_Q6KH27 Cluster: Predicted hydrolase; n=13; Mycoplasma|R... 41 0.036
UniRef50_Q1NUX3 Cluster: Beta-lactamase-like:RNA-metabolising me... 41 0.036
UniRef50_A0WB37 Cluster: DNA internalization-related competence ... 41 0.036
UniRef50_Q748A2 Cluster: Metallo-beta-lactamase family protein; ... 40 0.048
UniRef50_Q1IUF3 Cluster: Beta-lactamase-like precursor; n=1; Aci... 40 0.048
UniRef50_Q03AI9 Cluster: Predicted hydrolase of the metallo-beta... 40 0.063
UniRef50_Q02AY2 Cluster: Beta-lactamase domain protein; n=2; Bac... 40 0.084
UniRef50_A7AAI5 Cluster: Putative uncharacterized protein; n=2; ... 40 0.084
UniRef50_Q3LWF4 Cluster: Ysh1 3' mRNA end processing factor; n=1... 40 0.084
UniRef50_A6NRM5 Cluster: Putative uncharacterized protein; n=1; ... 39 0.11
UniRef50_A0W430 Cluster: Beta-lactamase-like; n=1; Geobacter lov... 39 0.11
UniRef50_Q1PWM3 Cluster: Similar to competence protein ComA; n=1... 39 0.15
UniRef50_Q024Z8 Cluster: Beta-lactamase domain protein precursor... 39 0.15
UniRef50_Q8TVW4 Cluster: Predicted hydrolase of the metallo-beta... 39 0.15
UniRef50_Q0W6M0 Cluster: Metallo-beta-lactamase; n=3; Euryarchae... 39 0.15
UniRef50_Q58271 Cluster: UPF0036 protein MJ0861; n=15; Archaea|R... 39 0.15
UniRef50_Q82SI4 Cluster: Metallo-beta-lactamase superfamily; n=4... 38 0.19
UniRef50_Q6F968 Cluster: Competence factor involved in DNA uptak... 38 0.19
UniRef50_A0RTJ7 Cluster: Hydrolase of the metallo-beta-lactamase... 38 0.19
UniRef50_Q98JF7 Cluster: Mll1963 protein; n=1; Mesorhizobium lot... 38 0.26
UniRef50_Q8YS71 Cluster: All3220 protein; n=10; Cyanobacteria|Re... 38 0.26
UniRef50_Q4L6T9 Cluster: Similar to ComEC late competence protei... 38 0.26
UniRef50_A6CVL4 Cluster: Beta-lactamase-like protein; n=1; Vibri... 38 0.26
UniRef50_Q5KIP3 Cluster: Cleavage and polyadenylation specificit... 38 0.26
UniRef50_Q9K9I5 Cluster: BH2662 protein; n=43; Bacteria|Rep: BH2... 38 0.34
UniRef50_Q1ATH2 Cluster: Beta-lactamase-like protein; n=1; Rubro... 38 0.34
UniRef50_A6TMT5 Cluster: Beta-lactamase domain protein; n=1; Alk... 38 0.34
UniRef50_A7I6D7 Cluster: Beta-lactamase domain protein; n=1; Can... 38 0.34
UniRef50_Q8DAV3 Cluster: Rec2-related protein; n=2; Vibrio vulni... 37 0.45
UniRef50_Q72BD6 Cluster: Metallo-beta-lactamase family protein; ... 37 0.45
UniRef50_Q0EY53 Cluster: Putative uncharacterized protein; n=1; ... 37 0.45
UniRef50_A5D4E8 Cluster: Predicted exonuclease of the beta-lacta... 37 0.45
UniRef50_A2EZM9 Cluster: Metallo-beta-lactamase superfamily prot... 37 0.45
UniRef50_Q9HKD3 Cluster: Putative uncharacterized protein Ta0668... 37 0.45
UniRef50_Q18IK7 Cluster: Ribonuclease Z; n=1; Haloquadratum wals... 37 0.45
UniRef50_Q2SR38 Cluster: Metallo-beta-lactamase superfamily prot... 37 0.59
UniRef50_A6LS78 Cluster: Beta-lactamase domain protein precursor... 37 0.59
UniRef50_A5IIH1 Cluster: Metal-dependent hydrolase of the beta-l... 37 0.59
UniRef50_A5CEC6 Cluster: Metallo-beta-lactamase family protein; ... 37 0.59
UniRef50_Q64AS7 Cluster: Putative uncharacterized protein; n=1; ... 37 0.59
UniRef50_P54123 Cluster: UPF0036 protein slr0551; n=38; Cyanobac... 37 0.59
UniRef50_Q97S10 Cluster: Metallo-beta-lactamase superfamily prot... 36 0.78
UniRef50_A7DE09 Cluster: Beta-lactamase domain protein; n=2; Met... 36 0.78
UniRef50_A6PKD4 Cluster: Beta-lactamase domain protein precursor... 36 0.78
UniRef50_Q9HLY7 Cluster: Putative uncharacterized protein Ta0086... 36 0.78
UniRef50_A1S008 Cluster: Beta-lactamase domain protein; n=1; The... 36 0.78
UniRef50_Q55470 Cluster: Uncharacterized protein sll0514; n=1; S... 36 0.78
UniRef50_Q5SJ74 Cluster: Metallo-beta-lactamase superfamily prot... 36 1.0
UniRef50_Q0LNU4 Cluster: Beta-lactamase-like; n=1; Herpetosiphon... 36 1.0
UniRef50_A3ERL5 Cluster: Putative hydrolase of the metallo-beta-... 36 1.0
UniRef50_Q331V3 Cluster: Putative uncharacterized protein; n=1; ... 36 1.0
UniRef50_A4YGQ9 Cluster: Beta-lactamase domain protein; n=3; Sul... 36 1.0
UniRef50_Q45493 Cluster: UPF0036 protein ykqC; n=110; Bacilli|Re... 36 1.0
UniRef50_UPI00015B9771 Cluster: UPI00015B9771 related cluster; n... 36 1.4
UniRef50_Q2Q0D8 Cluster: Putative mRNA processing factor; n=1; u... 36 1.4
UniRef50_A0VNF9 Cluster: Beta-lactamase domain protein; n=7; Rho... 36 1.4
UniRef50_Q387M8 Cluster: Cleavage and polyadenylation specificit... 36 1.4
UniRef50_UPI0000164CFE Cluster: hypothetical protein DR_2417m; n... 35 1.8
UniRef50_Q9K890 Cluster: BH3116 protein; n=19; Bacillaceae|Rep: ... 35 1.8
UniRef50_Q12M67 Cluster: Putative uncharacterized protein precur... 35 1.8
UniRef50_Q0LFP8 Cluster: Beta-lactamase-like; n=1; Herpetosiphon... 35 1.8
UniRef50_A7H6C5 Cluster: Beta-lactamase domain protein; n=2; Ana... 35 1.8
UniRef50_A5N479 Cluster: Predicted hydrolase; n=1; Clostridium k... 35 1.8
UniRef50_A5N0B8 Cluster: Putative uncharacterized protein; n=1; ... 35 1.8
UniRef50_A4YR56 Cluster: Putative uncharacterized protein; n=2; ... 35 1.8
UniRef50_Q8TXA0 Cluster: Predicted hydrolase of the metallo-beta... 35 1.8
UniRef50_Q8PSY2 Cluster: Metal dependent hydrolase; n=4; Methano... 35 1.8
UniRef50_O28127 Cluster: Putative uncharacterized protein; n=1; ... 35 1.8
UniRef50_Q92MK8 Cluster: Putative uncharacterized protein; n=2; ... 35 2.4
UniRef50_Q8U848 Cluster: ABC transporter, membrane spanning prot... 35 2.4
UniRef50_Q2JNE4 Cluster: Metallo-beta-lactamase family protein; ... 35 2.4
UniRef50_Q41CQ7 Cluster: Beta-lactamase-like; n=1; Exiguobacteri... 35 2.4
UniRef50_Q1NXK1 Cluster: Beta-lactamase-like:RNA-metabolising me... 35 2.4
UniRef50_Q1GX24 Cluster: Beta-lactamase-like protein; n=2; Alpha... 35 2.4
UniRef50_Q1GJ92 Cluster: Beta-lactamase-like protein; n=4; Rhodo... 35 2.4
UniRef50_Q0B1F4 Cluster: Beta-lactamase domain protein; n=1; Bur... 35 2.4
UniRef50_Q02B47 Cluster: Beta-lactamase domain protein precursor... 35 2.4
UniRef50_A6EA02 Cluster: Putative uncharacterized protein; n=1; ... 35 2.4
UniRef50_A5KS50 Cluster: Beta-lactamase domain protein; n=1; can... 35 2.4
UniRef50_A5D3Z5 Cluster: Predicted hydrolase; n=1; Pelotomaculum... 35 2.4
UniRef50_A4BLQ3 Cluster: Dihydropteroate synthase; n=1; Nitrococ... 35 2.4
UniRef50_A0UYT6 Cluster: DNA internalization-related competence ... 35 2.4
UniRef50_Q8FTX6 Cluster: Putative uncharacterized protein; n=1; ... 34 3.1
UniRef50_Q823Y9 Cluster: Metal-dependent hydrolase, putative; n=... 34 3.1
UniRef50_Q5X8R0 Cluster: Putative uncharacterized protein; n=1; ... 34 3.1
UniRef50_Q1MYS7 Cluster: Beta-lactamase related protein; n=1; Oc... 34 3.1
UniRef50_A7FRE4 Cluster: Metallo-beta-lactamase family protein; ... 34 3.1
UniRef50_A0X2P5 Cluster: Beta-lactamase domain protein; n=2; Alt... 34 3.1
UniRef50_Q011B3 Cluster: Putative metallo beta subunit lactamase... 34 3.1
UniRef50_Q4QA79 Cluster: Cleavage and polyadenylation specificit... 34 3.1
UniRef50_Q6CLJ0 Cluster: Similar to sgd|S0002884 Saccharomyces c... 34 3.1
UniRef50_Q7UM92 Cluster: Putative uncharacterized protein; n=1; ... 34 4.2
UniRef50_Q2AF62 Cluster: Beta-lactamase-like; n=1; Halothermothr... 34 4.2
UniRef50_A6TST8 Cluster: Beta-lactamase domain protein; n=1; Alk... 34 4.2
UniRef50_Q5ASU5 Cluster: Putative uncharacterized protein; n=2; ... 34 4.2
UniRef50_A4STH4 Cluster: Anaerobic nitric oxide reductase flavor... 34 4.2
UniRef50_Q8EVN2 Cluster: Putative uncharacterized protein MYPE52... 33 5.5
UniRef50_Q89RI1 Cluster: Bll2791 protein; n=29; Bacteria|Rep: Bl... 33 5.5
UniRef50_Q1IVQ6 Cluster: Beta-lactamase-like protein precursor; ... 33 5.5
UniRef50_Q1ISV3 Cluster: Putative uncharacterized protein; n=1; ... 33 5.5
UniRef50_Q1IJ31 Cluster: Putative uncharacterized protein; n=1; ... 33 5.5
UniRef50_Q128F6 Cluster: Beta-lactamase-like; n=8; Burkholderial... 33 5.5
UniRef50_Q120B9 Cluster: Beta-lactamase-like; n=1; Polaromonas s... 33 5.5
UniRef50_Q01V77 Cluster: Beta-lactamase domain protein precursor... 33 5.5
UniRef50_A0T8Q6 Cluster: Putative uncharacterized protein; n=1; ... 33 5.5
UniRef50_A0Q3S0 Cluster: Metallo-beta-lactamase superfamily prot... 33 5.5
UniRef50_A7S9Y8 Cluster: Predicted protein; n=1; Nematostella ve... 33 5.5
UniRef50_A2SUA2 Cluster: Beta-lactamase domain protein; n=1; Met... 33 5.5
UniRef50_P20581 Cluster: Uncharacterized protein PA1000; n=8; Ps... 33 5.5
UniRef50_UPI000038E4D8 Cluster: hypothetical protein Faci_030006... 33 7.3
UniRef50_Q5L050 Cluster: Hypothetical conserved protein; n=3; Ba... 33 7.3
UniRef50_Q6SI24 Cluster: Recombination protein-related protein; ... 33 7.3
UniRef50_Q0RZX1 Cluster: Possible beta-lactamase; n=5; Actinomyc... 33 7.3
UniRef50_A4ACJ2 Cluster: Metallo-beta-lactamase superfamily prot... 33 7.3
UniRef50_Q20700 Cluster: Putative uncharacterized protein; n=2; ... 33 7.3
UniRef50_A7S7X0 Cluster: Predicted protein; n=1; Nematostella ve... 33 7.3
UniRef50_A4WIL3 Cluster: Beta-lactamase domain protein; n=4; Pyr... 33 7.3
UniRef50_Q88FQ4 Cluster: Ribonuclease Z; n=9; Gammaproteobacteri... 33 7.3
UniRef50_UPI000023D29B Cluster: hypothetical protein FG06635.1; ... 33 9.6
UniRef50_Q988B9 Cluster: Mlr6805 protein; n=1; Mesorhizobium lot... 33 9.6
UniRef50_Q65JA2 Cluster: Putative uncharacterized protein; n=1; ... 33 9.6
UniRef50_Q5FUV1 Cluster: Metal-dependent hydrolase; n=4; Rhodosp... 33 9.6
UniRef50_Q4A0L9 Cluster: Similar to quorum-quenching N-acyl homo... 33 9.6
UniRef50_Q31H21 Cluster: DNA internalization-related competence ... 33 9.6
UniRef50_Q2LSY9 Cluster: Zn-dependent hydrolase including glyoxy... 33 9.6
UniRef50_Q2AIR4 Cluster: Beta-lactamase-like:Flavodoxin/nitric o... 33 9.6
UniRef50_Q1IY03 Cluster: Beta-lactamase-like protein; n=1; Deino... 33 9.6
UniRef50_Q15Z46 Cluster: Beta-lactamase-like; n=2; Alteromonadal... 33 9.6
UniRef50_Q0AW46 Cluster: Zn-dependent hydrolase including glyoxy... 33 9.6
UniRef50_A6GS28 Cluster: Beta-lactamase-like protein; n=1; Limno... 33 9.6
UniRef50_A6GF82 Cluster: Metal-dependent Hydrolase of the beta-l... 33 9.6
UniRef50_A6FNJ5 Cluster: Beta-lactamase-like protein; n=1; Roseo... 33 9.6
UniRef50_A5CSG3 Cluster: Complete genome; n=1; Clavibacter michi... 33 9.6
UniRef50_A4EYE5 Cluster: Putative uncharacterized protein; n=1; ... 33 9.6
UniRef50_A4EQ82 Cluster: Beta-lactamase-like protein; n=1; Roseo... 33 9.6
UniRef50_A4EC58 Cluster: Putative uncharacterized protein; n=1; ... 33 9.6
UniRef50_A4A4Y0 Cluster: Protein, putative metallo-beta-lactamas... 33 9.6
UniRef50_A3W6H1 Cluster: Putative uncharacterized protein; n=1; ... 33 9.6
UniRef50_A3A4I3 Cluster: Putative uncharacterized protein; n=1; ... 33 9.6
UniRef50_Q7YXA4 Cluster: Putative uncharacterized protein sru-45... 33 9.6
UniRef50_A2QNF6 Cluster: Contig An07c0130, complete genome; n=1;... 33 9.6
UniRef50_Q9V090 Cluster: Metallo-beta-lactamase superfamily prot... 33 9.6
UniRef50_A7I6N7 Cluster: Beta-lactamase domain protein; n=1; Can... 33 9.6
>UniRef50_Q5TA45 Cluster: Integrator complex subunit 11; n=29;
Eukaryota|Rep: Integrator complex subunit 11 - Homo
sapiens (Human)
Length = 600
Score = 290 bits (712), Expect = 2e-77
Identities = 126/159 (79%), Positives = 145/159 (91%)
Frame = +2
Query: 260 MPDIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQ 439
MP+I++TPLGAGQDVGRSCIL+++ GKN+MLDCGMHMG+ND+RRFPDFSYI G +T
Sbjct: 1 MPEIRVTPLGAGQDVGRSCILVSIAGKNVMLDCGMHMGFNDDRRFPDFSYITQNGRLTDF 60
Query: 440 IDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGESNF 619
+DCVIISHFHLDHCGALPY SEM+GY GPIYMTHPT+AI PILLED RK+AV++KGE+NF
Sbjct: 61 LDCVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILLEDYRKIAVDKKGEANF 120
Query: 620 FTSQMIKDCMKKVTAVTLHQSVMVDNELEIKAYYAGHVL 736
FTSQMIKDCMKKV AV LHQ+V VD+ELEIKAYYAGHVL
Sbjct: 121 FTSQMIKDCMKKVVAVHLHQTVQVDDELEIKAYYAGHVL 159
>UniRef50_Q9U3K2 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 608
Score = 263 bits (645), Expect = 3e-69
Identities = 115/159 (72%), Positives = 136/159 (85%)
Frame = +2
Query: 260 MPDIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQ 439
+P+IKI PLGAGQDVGRSCIL+T+GGKNIM+DCGMHMGY D+RRFPDFSYI G +T
Sbjct: 5 IPEIKIVPLGAGQDVGRSCILITIGGKNIMVDCGMHMGYQDDRRFPDFSYIGGGGRLTDY 64
Query: 440 IDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGESNF 619
+DCVIISHFHLDHCG+LP+MSE++GY GPIYMT+PTKAI P+LLED RKV + KGE+NF
Sbjct: 65 LDCVIISHFHLDHCGSLPHMSEIVGYDGPIYMTYPTKAICPVLLEDYRKVQCDIKGETNF 124
Query: 620 FTSQMIKDCMKKVTAVTLHQSVMVDNELEIKAYYAGHVL 736
FTS IK+CMKKV LH+ + VDNEL I+A+YAGHVL
Sbjct: 125 FTSDDIKNCMKKVVGCALHEIIHVDNELSIRAFYAGHVL 163
>UniRef50_Q5TA51 Cluster: Cleavage and polyadenylation specific
factor 3-like; n=2; Homo sapiens|Rep: Cleavage and
polyadenylation specific factor 3-like - Homo sapiens
(Human)
Length = 308
Score = 260 bits (638), Expect = 2e-68
Identities = 112/144 (77%), Positives = 130/144 (90%)
Frame = +2
Query: 260 MPDIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQ 439
MP+I++TPLGAGQDVGRSCIL+++ GKN+MLDCGMHMG+ND+RRFPDFSYI G +T
Sbjct: 20 MPEIRVTPLGAGQDVGRSCILVSIAGKNVMLDCGMHMGFNDDRRFPDFSYITQNGRLTDF 79
Query: 440 IDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGESNF 619
+DCVIISHFHLDHCGALPY SEM+GY GPIYMTHPT+AI PILLED RK+AV++KGE+NF
Sbjct: 80 LDCVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILLEDYRKIAVDKKGEANF 139
Query: 620 FTSQMIKDCMKKVTAVTLHQSVMV 691
FTSQMIKDCMKKV AV LHQ+V V
Sbjct: 140 FTSQMIKDCMKKVVAVHLHQTVQV 163
>UniRef50_A6NEN7 Cluster: Uncharacterized protein CPSF3L; n=16;
Theria|Rep: Uncharacterized protein CPSF3L - Homo
sapiens (Human)
Length = 277
Score = 260 bits (637), Expect = 3e-68
Identities = 111/144 (77%), Positives = 130/144 (90%)
Frame = +2
Query: 260 MPDIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQ 439
MP+I++TPLGAGQDVGRSCIL+++ GKN+MLDCGMHMG+ND+RRFPDFSYI G +T
Sbjct: 1 MPEIRVTPLGAGQDVGRSCILVSIAGKNVMLDCGMHMGFNDDRRFPDFSYITQNGRLTDF 60
Query: 440 IDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGESNF 619
+DCVIISHFHLDHCGALPY SEM+GY GPIYMTHPT+AI PILLED RK+AV++KGE+NF
Sbjct: 61 LDCVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILLEDYRKIAVDKKGEANF 120
Query: 620 FTSQMIKDCMKKVTAVTLHQSVMV 691
FTSQMIKDCMKKV AV LHQ+V +
Sbjct: 121 FTSQMIKDCMKKVVAVHLHQTVQI 144
>UniRef50_Q5TA44 Cluster: Cleavage and polyadenylation specific
factor 3-like; n=4; Eutheria|Rep: Cleavage and
polyadenylation specific factor 3-like - Homo sapiens
(Human)
Length = 401
Score = 240 bits (588), Expect = 2e-62
Identities = 101/130 (77%), Positives = 119/130 (91%)
Frame = +2
Query: 260 MPDIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQ 439
MP+I++TPLGAGQDVGRSCIL+++ GKN+MLDCGMHMG+ND+RRFPDFSYI G +T
Sbjct: 13 MPEIRVTPLGAGQDVGRSCILVSIAGKNVMLDCGMHMGFNDDRRFPDFSYITQNGRLTDF 72
Query: 440 IDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGESNF 619
+DCVIISHFHLDHCGALPY SEM+GY GPIYMTHPT+AI PILLED RK+AV++KGE+NF
Sbjct: 73 LDCVIISHFHLDHCGALPYFSEMVGYDGPIYMTHPTQAICPILLEDYRKIAVDKKGEANF 132
Query: 620 FTSQMIKDCM 649
FTSQMIKDC+
Sbjct: 133 FTSQMIKDCI 142
>UniRef50_Q8GUU3 Cluster: FEG protein; n=8; Magnoliophyta|Rep: FEG
protein - Arabidopsis thaliana (Mouse-ear cress)
Length = 613
Score = 210 bits (512), Expect = 4e-53
Identities = 86/151 (56%), Positives = 119/151 (78%)
Frame = +2
Query: 284 LGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISH 463
LGAGQ++G+SC+++T+ GK IM DCGMHMG +D R+P+FS I G + I C+II+H
Sbjct: 8 LGAGQEIGKSCVVVTINGKKIMFDCGMHMGCDDHNRYPNFSLISKSGDFDNAISCIIITH 67
Query: 464 FHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGESNFFTSQMIKD 643
FH+DH GALPY +E+ GY GPIYM++PTKA++P++LED R+V V+R+GE FT+ I +
Sbjct: 68 FHMDHVGALPYFTEVCGYNGPIYMSYPTKALSPLMLEDYRRVMVDRRGEEELFTTTHIAN 127
Query: 644 CMKKVTAVTLHQSVMVDNELEIKAYYAGHVL 736
CMKKV A+ L Q++ VD +L+I+AYYAGHVL
Sbjct: 128 CMKKVIAIDLKQTIQVDEDLQIRAYYAGHVL 158
>UniRef50_Q5CRW9 Cluster: CPSF metallobeta-lactamase; n=2;
Cryptosporidium|Rep: CPSF metallobeta-lactamase -
Cryptosporidium parvum Iowa II
Length = 751
Score = 170 bits (413), Expect = 3e-41
Identities = 86/177 (48%), Positives = 112/177 (63%), Gaps = 21/177 (11%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPE-GP--ITSQ 439
I I PLGAGQDVGRSCI+ +G K +M DCGMHMG+ DER++PDF I P I
Sbjct: 5 ISIIPLGAGQDVGRSCIIAKIGSKTVMFDCGMHMGFKDERKYPDFRLISATLDPLIINEY 64
Query: 440 IDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVER------ 601
ID VIISH+HLDHCGALP+ +E IGY GPI MT+PTK+++ +LL D K+ ++
Sbjct: 65 IDLVIISHYHLDHCGALPFFTEKIGYKGPIVMTYPTKSVSSVLLSDCCKIMEQKLLLQKT 124
Query: 602 ------------KGESNFFTSQMIKDCMKKVTAVTLHQSVMVDNELEIKAYYAGHVL 736
E FFT + CM+KV A+ LHQ++++ ++I YYAGHVL
Sbjct: 125 NVDVAPPNETVYNNEYGFFTVSDVWSCMEKVKAIQLHQTIVISG-IKITPYYAGHVL 180
>UniRef50_Q8SUE4 Cluster: Putative uncharacterized protein
ECU10_0900; n=1; Encephalitozoon cuniculi|Rep: Putative
uncharacterized protein ECU10_0900 - Encephalitozoon
cuniculi
Length = 730
Score = 137 bits (332), Expect = 2e-31
Identities = 68/156 (43%), Positives = 96/156 (61%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 448
IKI PLGAG +VGRSC+++ GG+ IMLDCG+H Y P F +V S+ID
Sbjct: 94 IKIMPLGAGNEVGRSCVIVECGGRTIMLDCGVHPAYTGMASLP-FLDLVD----LSKIDA 148
Query: 449 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGESNFFTS 628
V I+HFHLDH ALP+++E + G +YMTHPTKAI LL D ++ + +++F+T
Sbjct: 149 VFITHFHLDHAAALPFLTEKTSFRGKVYMTHPTKAILKWLLNDYIRI-INASSDTDFYTE 207
Query: 629 QMIKDCMKKVTAVTLHQSVMVDNELEIKAYYAGHVL 736
+ C ++ + HQ V V +++KA AGHVL
Sbjct: 208 TDLVKCYDRIIPIDYHQEVNVKG-IKVKALNAGHVL 242
>UniRef50_A4S2M5 Cluster: Predicted protein; n=4; Viridiplantae|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 767
Score = 126 bits (303), Expect = 7e-28
Identities = 59/156 (37%), Positives = 91/156 (58%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 448
++I PLGAG +VGRSC++ K +M DCG+H GY P F I + +D
Sbjct: 12 LEIIPLGAGSEVGRSCVIARYKQKTLMFDCGIHPGYAGLASLPYFDEID-----LADVDA 66
Query: 449 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGESNFFTS 628
+ ++HFHLDHC A+P++ + G I+MTHPTKAI +L++D ++ ++ F
Sbjct: 67 LFVTHFHLDHCAAVPFLCGRTDFNGRIFMTHPTKAIYHMLMQDFCRLLKNQEPSEQLFGE 126
Query: 629 QMIKDCMKKVTAVTLHQSVMVDNELEIKAYYAGHVL 736
+ ++ MKK+ + HQ V VD +++ Y AGHVL
Sbjct: 127 KDLEASMKKIEVIDFHQEVDVDG-VKVTPYRAGHVL 161
>UniRef50_Q9UKF6 Cluster: Cleavage and polyadenylation specificity
factor subunit 3; n=53; Eumetazoa|Rep: Cleavage and
polyadenylation specificity factor subunit 3 - Homo
sapiens (Human)
Length = 684
Score = 124 bits (299), Expect = 2e-27
Identities = 65/154 (42%), Positives = 89/154 (57%)
Frame = +2
Query: 275 ITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVI 454
I PLGAGQ+VGRSCI+L G+ IMLDCG+H G P I P ++ID ++
Sbjct: 14 IRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLIDP-----AEIDLLL 68
Query: 455 ISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGESNFFTSQM 634
ISHFHLDHCGALP+ + + G +MTH TKAI LL D KV+ + +T
Sbjct: 69 ISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVS-NISADDMLYTETD 127
Query: 635 IKDCMKKVTAVTLHQSVMVDNELEIKAYYAGHVL 736
+++ M K+ + H+ V ++ Y+AGHVL
Sbjct: 128 LEESMDKIETINFHEVKEVAG-IKFWCYHAGHVL 160
>UniRef50_Q86A79 Cluster: Similar to Homo sapiens (Human). Cleavage
and polyadenylation specificity factor, 73 kDa subunit;
n=2; Dictyostelium discoideum|Rep: Similar to Homo
sapiens (Human). Cleavage and polyadenylation
specificity factor, 73 kDa subunit - Dictyostelium
discoideum (Slime mold)
Length = 774
Score = 122 bits (295), Expect = 7e-27
Identities = 61/156 (39%), Positives = 90/156 (57%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 448
++ITP+G+G +VGRSC+LL GK +M DCG+H Y+ P F I + P ID
Sbjct: 36 LEITPIGSGSEVGRSCVLLKYKGKKVMFDCGVHPAYSGLVSLPFFDSIESDIP---DIDL 92
Query: 449 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGESNFFTS 628
+++SHFHLDH A+PY + G ++MTHPTKAI +LL D KV+ + + F
Sbjct: 93 LLVSHFHLDHAAAVPYFVGKTKFKGRVFMTHPTKAIYGMLLSDYVKVSNITRDDDMLFDK 152
Query: 629 QMIKDCMKKVTAVTLHQSVMVDNELEIKAYYAGHVL 736
+ ++K+ V Q V N +++ + AGHVL
Sbjct: 153 SDLDRSLEKIEKVRYRQKV-EHNGIKVTCFNAGHVL 187
>UniRef50_A2FCF8 Cluster: RNA-metabolising metallo-beta-lactamase
family protein; n=1; Trichomonas vaginalis G3|Rep:
RNA-metabolising metallo-beta-lactamase family protein -
Trichomonas vaginalis G3
Length = 679
Score = 121 bits (292), Expect = 2e-26
Identities = 62/156 (39%), Positives = 89/156 (57%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 448
+ + PLGAGQ+VGRSCI+L K +MLDCG+H Y + P I P ++ID
Sbjct: 11 LTVMPLGAGQEVGRSCIILKYHRKRVMLDCGIHPAYENFGGLPFIDAIDP-----AKIDV 65
Query: 449 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGESNFFTS 628
++I+HFH+DH A+P+ ++GP +MTH TK I+ LL D V+ E N FT
Sbjct: 66 LLITHFHIDHITAVPWFLTQTNFSGPCFMTHTTKTISKTLLVDYVGVSGRGSEEPNLFTR 125
Query: 629 QMIKDCMKKVTAVTLHQSVMVDNELEIKAYYAGHVL 736
+ + +TAV HQ+V +++ Y AGHVL
Sbjct: 126 ADVANVQNMITAVNYHQTV-THQGIKMTCYPAGHVL 160
>UniRef50_UPI0001555813 Cluster: PREDICTED: hypothetical protein,
partial; n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
hypothetical protein, partial - Ornithorhynchus anatinus
Length = 513
Score = 120 bits (290), Expect = 3e-26
Identities = 50/66 (75%), Positives = 60/66 (90%)
Frame = +2
Query: 260 MPDIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQ 439
MP+IK+TPLGAGQDVGRSCIL+++ GKN+MLDCGMHMGYND+RRFPDFSYI G +T+
Sbjct: 1 MPEIKVTPLGAGQDVGRSCILVSIAGKNVMLDCGMHMGYNDDRRFPDFSYITQSGRLTNF 60
Query: 440 IDCVII 457
+DCVII
Sbjct: 61 LDCVII 66
>UniRef50_A0BGT5 Cluster: Chromosome undetermined scaffold_106,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_106,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 690
Score = 120 bits (290), Expect = 3e-26
Identities = 66/156 (42%), Positives = 89/156 (57%), Gaps = 2/156 (1%)
Frame = +2
Query: 275 ITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDE--RRFPDFSYIVPEGPITSQIDC 448
ITPLGAG +VGRSCILL K IM DCG+HM ++ P F+ I ID
Sbjct: 10 ITPLGAGNEVGRSCILLQFQEKQIMFDCGIHMNKENKGVMALPYFNKIDK----IEDIDL 65
Query: 449 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGESNFFTS 628
++I+HFHLDHCGALPY + + G IYMT PTK I ++L+D KV E + +
Sbjct: 66 ILITHFHLDHCGALPYFLKNYKFKGKIYMTTPTKEIYGLVLKDSIKVKSEDFSQ-DLINE 124
Query: 629 QMIKDCMKKVTAVTLHQSVMVDNELEIKAYYAGHVL 736
Q I+ +K + + Q + +++K Y AGHVL
Sbjct: 125 QSIEQSLKNIDCIDYDQEIHYQG-IKLKCYNAGHVL 159
>UniRef50_Q236M0 Cluster: RNA-metabolising metallo-beta-lactamase
family protein; n=1; Tetrahymena thermophila SB210|Rep:
RNA-metabolising metallo-beta-lactamase family protein -
Tetrahymena thermophila SB210
Length = 750
Score = 119 bits (287), Expect = 6e-26
Identities = 64/157 (40%), Positives = 88/157 (56%), Gaps = 3/157 (1%)
Frame = +2
Query: 275 ITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVI 454
I PLGAGQ+VGRSCI+L GK IM DCG+HMG N P F I P+ QID +
Sbjct: 3 IYPLGAGQEVGRSCIILEYKGKTIMFDCGLHMGKNGHASLPYFDNIKPD-----QIDIIF 57
Query: 455 ISHFHLDHCGALPYMSEMIGYTG---PIYMTHPTKAIAPILLEDMRKVAVERKGESNFFT 625
I+HFHLDHC ALPY + G +Y T PT+AI +L D ++ +T
Sbjct: 58 ITHFHLDHCAALPYFIAKTDFDGKKQKVYATSPTRAIYRHVLRDS---LTDKSENIKLYT 114
Query: 626 SQMIKDCMKKVTAVTLHQSVMVDNELEIKAYYAGHVL 736
+ I+ M+ + + ++ + +N ++ K Y AGHVL
Sbjct: 115 ADDIEKSMEVINVIDFYEEMEHEN-IKFKCYPAGHVL 150
>UniRef50_A0CN06 Cluster: Chromosome undetermined scaffold_22, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_22,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 484
Score = 117 bits (281), Expect = 3e-25
Identities = 63/154 (40%), Positives = 89/154 (57%), Gaps = 24/154 (15%)
Frame = +2
Query: 347 MLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISHFHLDHCGALPYMSEMI--GYT 520
MLDCG+HM + D RRFPDFS ++ E +D V+I+HFHLDHCGALPY +E+ GY
Sbjct: 1 MLDCGLHMTHQDNRRFPDFS-LIEEKLGRKYVDLVLITHFHLDHCGALPYFTELYGNGYN 59
Query: 521 GPIYMTHPTKAIAPILLEDMRKVAVERKGESNF----------------------FTSQM 634
GP+ M+ PTKA+ P +LED R++ K + F + +
Sbjct: 60 GPVVMSMPTKALLPYMLEDYRRIWTMPKEDQQFQQQSSQQDYSINPQIKTDPLLIYDHEN 119
Query: 635 IKDCMKKVTAVTLHQSVMVDNELEIKAYYAGHVL 736
IK C+ KV + L+++ D +E+ AYYAGH+L
Sbjct: 120 IKSCVNKVQVIGLYETQNFDG-VEVTAYYAGHLL 152
>UniRef50_Q95PY8 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 707
Score = 116 bits (280), Expect = 5e-25
Identities = 61/154 (39%), Positives = 88/154 (57%), Gaps = 1/154 (0%)
Frame = +2
Query: 278 TPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVII 457
TPLG+GQ+VGRSC LL GK +MLDCG+H G + P ++ E ID ++I
Sbjct: 14 TPLGSGQEVGRSCHLLEYKGKRVMLDCGVHPGLHGVDALPFVDFVEIEN-----IDLLLI 68
Query: 458 SHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGESN-FFTSQM 634
+HFHLDHCGALP++ + + G +MTH TKAI +LL D +++ + N +T
Sbjct: 69 THFHLDHCGALPWLLQKTAFQGKCFMTHATKAIYRMLLGDYVRISKYGGPDRNQLYTEDD 128
Query: 635 IKDCMKKVTAVTLHQSVMVDNELEIKAYYAGHVL 736
++ M K+ + + V N + Y AGHVL
Sbjct: 129 LEKSMAKIETIDFREQKEV-NGIRFWPYVAGHVL 161
>UniRef50_Q4Q2K1 Cluster: Cleavage and polyadenylation specificity
factor, putative; n=7; Trypanosomatidae|Rep: Cleavage
and polyadenylation specificity factor, putative -
Leishmania major
Length = 756
Score = 116 bits (278), Expect = 8e-25
Identities = 55/157 (35%), Positives = 91/157 (57%)
Frame = +2
Query: 266 DIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQID 445
++++ P+G+G +VGRSC+++ G+ +MLDCG H + P F I + +ID
Sbjct: 25 EVEVLPIGSGGEVGRSCVVVQYKGRGVMLDCGNHPAKSGLDSLPFFDSIKCD-----EID 79
Query: 446 CVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGESNFFT 625
V+I+HFHLDHCGALPY + G ++MT TKA +++ D ++ G S+ T
Sbjct: 80 VVLITHFHLDHCGALPYFCNQTSFKGRVFMTSATKAFYKMVMNDFLRIGA---GASDLVT 136
Query: 626 SQMIKDCMKKVTAVTLHQSVMVDNELEIKAYYAGHVL 736
S+ ++ + ++ V H+ V V N + + + AGHVL
Sbjct: 137 SEWLQSTIDRIETVEYHEEVTV-NGISFQPFNAGHVL 172
>UniRef50_Q226C1 Cluster: Putative FEG protein; n=2; Tetrahymena
thermophila SB210|Rep: Putative FEG protein -
Tetrahymena thermophila SB210
Length = 178
Score = 113 bits (273), Expect = 3e-24
Identities = 63/123 (51%), Positives = 75/123 (60%), Gaps = 6/123 (4%)
Frame = +2
Query: 248 VKLIMPDIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYI----- 412
+K + I++ PLGAGQDVGRS CG+HMG ND R+PDF I
Sbjct: 3 LKNVKDCIEVYPLGAGQDVGRSY-------------CGLHMGVNDLTRYPDFEKIKQIWN 49
Query: 413 VPEGPITSQI-DCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKV 589
+PE QI D V+ISHFHLDH GALPY +E+ Y GPIYMT PTKA+ P + ED RKV
Sbjct: 50 IPEKRKWDQIIDLVLISHFHLDHIGALPYFTEIYNYDGPIYMTSPTKALLPYMCEDFRKV 109
Query: 590 AVE 598
E
Sbjct: 110 ITE 112
>UniRef50_Q4TC63 Cluster: Chromosome undetermined SCAF7053, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF7053, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 810
Score = 109 bits (261), Expect = 9e-23
Identities = 55/108 (50%), Positives = 67/108 (62%)
Frame = +2
Query: 275 ITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVI 454
I PLGAGQ+VGRSCI+L G+ IMLDCG+H G P I P ++ID ++
Sbjct: 11 IRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLIDP-----AEIDLLL 65
Query: 455 ISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVE 598
ISHFHLDHCGALP+ + + G +MTH TKAI LL D KV E
Sbjct: 66 ISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVRWE 113
>UniRef50_Q4PEJ3 Cluster: Endoribonuclease YSH1; n=6; Fungi/Metazoa
group|Rep: Endoribonuclease YSH1 - Ustilago maydis (Smut
fungus)
Length = 880
Score = 108 bits (259), Expect = 2e-22
Identities = 57/159 (35%), Positives = 84/159 (52%), Gaps = 3/159 (1%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 448
+ I LGAGQ+VGRSC +L GK I+ D G+H + P + S +D
Sbjct: 24 LTIEMLGAGQEVGRSCCVLKYRGKTIVCDTGVHPAFTGIAALPFIDEL-----DWSTVDA 78
Query: 449 VIISHFHLDHCGALPYMSEMIGYT---GPIYMTHPTKAIAPILLEDMRKVAVERKGESNF 619
++I+HFHLDH AL Y+ E + G +YMTHPTKA+ L+ D +++ + N
Sbjct: 79 ILITHFHLDHAAALTYIMEKTNFRDGHGKVYMTHPTKAVYRFLMSDFVRIS-NAGNDDNL 137
Query: 620 FTSQMIKDCMKKVTAVTLHQSVMVDNELEIKAYYAGHVL 736
F + +++ AV HQ V + L +Y+AGHVL
Sbjct: 138 FDENEMLASWRQIEAVDFHQDVSIAGGLRFTSYHAGHVL 176
>UniRef50_O13794 Cluster: Endoribonuclease ysh1; n=2;
Ascomycota|Rep: Endoribonuclease ysh1 -
Schizosaccharomyces pombe (Fission yeast)
Length = 775
Score = 107 bits (258), Expect = 2e-22
Identities = 56/151 (37%), Positives = 83/151 (54%)
Frame = +2
Query: 284 LGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISH 463
LGAG +VGRSC ++ GK +MLD G+H Y P F S +D ++ISH
Sbjct: 42 LGAGNEVGRSCHVIQYKGKTVMLDAGVHPAYTGLSALPFFDEFD-----LSTVDVLLISH 96
Query: 464 FHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGESNFFTSQMIKD 643
FHLDH +LPY+ + + G ++MTHPTKA+ LL D KV+ E + + +
Sbjct: 97 FHLDHVASLPYVMQKTNFRGRVFMTHPTKAVCKWLLSDYVKVS-NVGMEDQLYDEKDLLA 155
Query: 644 CMKKVTAVTLHQSVMVDNELEIKAYYAGHVL 736
++ AV H ++ V+ ++ Y+AGHVL
Sbjct: 156 AFDRIEAVDYHSTIEVEG-IKFTPYHAGHVL 185
>UniRef50_Q06224 Cluster: Endoribonuclease YSH1; n=10; Fungi/Metazoa
group|Rep: Endoribonuclease YSH1 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 779
Score = 105 bits (252), Expect = 1e-21
Identities = 59/162 (36%), Positives = 85/162 (52%), Gaps = 7/162 (4%)
Frame = +2
Query: 272 KITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCV 451
K LG +VGRSC +L GK +MLD G+H Y P + S++D +
Sbjct: 10 KFFSLGGSNEVGRSCHILQYKGKTVMLDAGIHPAYQGLASLPFYDEFD-----LSKVDIL 64
Query: 452 IISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGESN----- 616
+ISHFHLDH +LPY+ + + G ++MTHPTKAI LL D +V S+
Sbjct: 65 LISHFHLDHAASLPYVMQRTNFQGRVFMTHPTKAIYRWLLRDFVRVTSIGSSSSSMGTKD 124
Query: 617 --FFTSQMIKDCMKKVTAVTLHQSVMVDNELEIKAYYAGHVL 736
F+ + + D K+ V H +V V N ++ A++AGHVL
Sbjct: 125 EGLFSDEDLVDSFDKIETVDYHSTVDV-NGIKFTAFHAGHVL 165
>UniRef50_Q58633 Cluster: Uncharacterized protein MJ1236; n=16;
Euryarchaeota|Rep: Uncharacterized protein MJ1236 -
Methanococcus jannaschii
Length = 634
Score = 104 bits (249), Expect = 3e-21
Identities = 58/176 (32%), Positives = 100/176 (56%)
Frame = +2
Query: 209 ILKRIFS*ASLDVVKLIMPDIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDER 388
IL+RI D+V I+++ LG ++VGRSC+ + +++DCG+++ D +
Sbjct: 160 ILRRIGRRIHRDIVVRGDYWIRVSFLGGAREVGRSCLYVQTPDTRVLIDCGINVACED-K 218
Query: 389 RFPDFSYIVPEGPITSQIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPIL 568
FP F PE I +D VI++H HLDHCG +P + GY GP+Y T PT+ + +L
Sbjct: 219 AFPHFD--APEFSI-EDLDAVIVTHAHLDHCGFIPGLFR-YGYDGPVYCTRPTRDLMTLL 274
Query: 569 LEDMRKVAVERKGESNFFTSQMIKDCMKKVTAVTLHQSVMVDNELEIKAYYAGHVL 736
+D ++A +++G+ +TS+ IK C+K + + + +++ + AGHVL
Sbjct: 275 QKDYLEIA-KKEGKEVPYTSKDIKTCVKHTIPIDYGVTTDISPTIKLTLHNAGHVL 329
>UniRef50_Q5CPX2 Cluster: Cleavage and polyadenylation specifity
factor protein, CPSF metallobeta-lactamase; n=2;
Cryptosporidium|Rep: Cleavage and polyadenylation
specifity factor protein, CPSF metallobeta-lactamase -
Cryptosporidium parvum Iowa II
Length = 780
Score = 101 bits (243), Expect = 1e-20
Identities = 56/164 (34%), Positives = 87/164 (53%), Gaps = 10/164 (6%)
Frame = +2
Query: 275 ITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVI 454
I LGAG +VGRSC++++ G+++M DCG+H ++ P F I S ID +
Sbjct: 26 IQVLGAGCEVGRSCVVVSFKGRSVMFDCGIHPAFSGIGSLPVFDAID-----VSTIDLCL 80
Query: 455 ISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKV------AVERK---- 604
I+HFHLDH GA PY + + G ++MT PTKAI ++ +D +V ++E +
Sbjct: 81 ITHFHLDHSGATPYFVSLTDFNGKVFMTEPTKAICKLVWQDYARVNKFSAGSIESEEAPL 140
Query: 605 GESNFFTSQMIKDCMKKVTAVTLHQSVMVDNELEIKAYYAGHVL 736
N +T + I+ + + Q V +D + Y AGHVL
Sbjct: 141 SSINLYTEKDIEKAINMTEIIDFRQQVELDG-IRFSCYGAGHVL 183
>UniRef50_UPI00015BA9DD Cluster: beta-lactamase domain protein; n=1;
Ignicoccus hospitalis KIN4/I|Rep: beta-lactamase domain
protein - Ignicoccus hospitalis KIN4/I
Length = 652
Score = 101 bits (242), Expect = 2e-20
Identities = 55/157 (35%), Positives = 95/157 (60%), Gaps = 1/157 (0%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMG-YNDERRFPDFSYIVPEGPITSQID 445
++IT LGA ++VGRS ILL ++LD G ++G Y+ ++ FP V E PI ++D
Sbjct: 182 VRITALGAFKEVGRSAILLETKESKVLLDFGANVGSYDPQKHFPK----VEEVPI-DELD 236
Query: 446 CVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGESNFFT 625
VI++H HLDHCG +P++ + GY GP+Y+T PT+ + ++ +D +VA ++G+ +T
Sbjct: 237 AVIVTHAHLDHCGLVPWLYK-YGYRGPVYVTQPTRDLMYLVQKDYIEVA-RKEGKPVPYT 294
Query: 626 SQMIKDCMKKVTAVTLHQSVMVDNELEIKAYYAGHVL 736
I + + A+ + V ++++ Y AGH+L
Sbjct: 295 ESDINSMLLRTIALNYGEVTDVAPDIKLTFYNAGHIL 331
>UniRef50_Q8TW11 Cluster: Predicted metal-dependent RNase, consists
of a metallo-beta-lactamase domain and an RNA-binding KH
domain; n=1; Methanopyrus kandleri|Rep: Predicted
metal-dependent RNase, consists of a
metallo-beta-lactamase domain and an RNA-binding KH
domain - Methanopyrus kandleri
Length = 652
Score = 101 bits (241), Expect = 2e-20
Identities = 52/157 (33%), Positives = 90/157 (57%), Gaps = 2/157 (1%)
Frame = +2
Query: 272 KITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCV 451
+++ LG Q+VGRS + L ++LDCG+++ N +P F+ VPE + +D +
Sbjct: 195 RVSALGGFQEVGRSSLFLHTEESRVLLDCGVNVAANGTDAYPHFN--VPEFRM-DDLDAI 251
Query: 452 IISHFHLDHCGALPYM--SEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGESNFFT 625
+I+H HLDHCG LPY ++I P+Y T PT+ + +LL D KV +E++G+ +T
Sbjct: 252 VITHAHLDHCGFLPYFYRHKVIESRVPVYCTPPTRDLMYLLLTDYIKV-LEKRGQEPPYT 310
Query: 626 SQMIKDCMKKVTAVTLHQSVMVDNELEIKAYYAGHVL 736
+ +K +K+ + + + ++ I Y AGH+L
Sbjct: 311 EKDVKKVIKRTITIDYREPTDITPDMSITFYNAGHIL 347
>UniRef50_Q97AZ6 Cluster: Cleavage and polyadenylation specificity
factor; n=9; Euryarchaeota|Rep: Cleavage and
polyadenylation specificity factor - Thermoplasma
volcanium
Length = 639
Score = 100 bits (240), Expect = 3e-20
Identities = 54/157 (34%), Positives = 88/157 (56%), Gaps = 1/157 (0%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYI-VPEGPITSQID 445
+++T LG +VGRS L++ +++DCGM D + Y+ VPE S ID
Sbjct: 180 VRLTALGGHSEVGRSATLVSTKNSKVLIDCGMMNVGPDADPWDAAPYLYVPEVQPLSSID 239
Query: 446 CVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGESNFFT 625
VI++H HLDH G LP + + GY GP+YMT PT+ +A +L +D KVA +G +
Sbjct: 240 AVILTHAHLDHSGLLPLLFKY-GYDGPVYMTQPTRDLAVLLQDDYIKVA-RMEGGKVPYE 297
Query: 626 SQMIKDCMKKVTAVTLHQSVMVDNELEIKAYYAGHVL 736
S+ I++ +K + ++ + ++ + Y AGH+L
Sbjct: 298 SKYIREELKHTITLRYGETTDITRDMRLTFYNAGHIL 334
>UniRef50_Q5KCZ0 Cluster: Endoribonuclease YSH1; n=2; cellular
organisms|Rep: Endoribonuclease YSH1 - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 773
Score = 100 bits (240), Expect = 3e-20
Identities = 55/162 (33%), Positives = 83/162 (51%), Gaps = 4/162 (2%)
Frame = +2
Query: 263 PDIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQI 442
P + IT LGAGQ+VGRSC ++ GK I+ D G+H P + S +
Sbjct: 27 PSLTITMLGAGQEVGRSCCVIEHRGKKIVCDAGLHPAQPGIGALPFIDEL-----DWSTV 81
Query: 443 DCVIISHFHLDHCGALPYMSEMIGY---TGPIYMTHPTKAIAPILLEDMRKVAVERKGES 613
D ++I+HFH+DH ALPY+ E + G +YMTH TKAI + + D ++ + S
Sbjct: 82 DAMLITHFHVDHAAALPYIMEKTNFKDGNGKVYMTHATKAIYGLTMMDTVRLNDQNPDTS 141
Query: 614 -NFFTSQMIKDCMKKVTAVTLHQSVMVDNELEIKAYYAGHVL 736
+ ++ + AV HQ +++ L Y+AGHVL
Sbjct: 142 GRLYDEADVQSSWQSTIAVDYHQDIVIAGGLRFTPYHAGHVL 183
>UniRef50_A2D958 Cluster: RNA-metabolising metallo-beta-lactamase
family protein; n=1; Trichomonas vaginalis G3|Rep:
RNA-metabolising metallo-beta-lactamase family protein -
Trichomonas vaginalis G3
Length = 588
Score = 99.5 bits (237), Expect = 7e-20
Identities = 51/151 (33%), Positives = 87/151 (57%), Gaps = 1/151 (0%)
Frame = +2
Query: 287 GAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDER-RFPDFSYIVPEGPITSQIDCVIISH 463
GAG +VGRS IL+ +G K ++LDCG++ DE+ R P + P+ +D V+ISH
Sbjct: 19 GAGGEVGRSSILVEIGSKKVLLDCGVNFTATDEKDRLPAYQDPFPK------VDLVLISH 72
Query: 464 FHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGESNFFTSQMIKD 643
H DH A+PY++E++ P+YMT ++ + PI+L+D KV E+ + ++ + +
Sbjct: 73 IHTDHLAAVPYLTEVLKCQAPVYMTRASQMMMPIMLDDFLKVT-----ENPPYKAEDLTN 127
Query: 644 CMKKVTAVTLHQSVMVDNELEIKAYYAGHVL 736
C K+ V + + ++A+ AGH+L
Sbjct: 128 CKPKIKVVEFYSRFEAAPGIFVQAFPAGHIL 158
>UniRef50_A1RWY8 Cluster: Beta-lactamase domain protein; n=1;
Thermofilum pendens Hrk 5|Rep: Beta-lactamase domain
protein - Thermofilum pendens (strain Hrk 5)
Length = 639
Score = 99.5 bits (237), Expect = 7e-20
Identities = 57/157 (36%), Positives = 91/157 (57%), Gaps = 1/157 (0%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMH-MGYNDERRFPDFSYIVPEGPITSQID 445
++I LGA +VGRS +L+ NI+LD G+ G DE P F +PE + S +D
Sbjct: 180 VRIVSLGAFHEVGRSAVLVQTPEANILLDAGLKPTGNGDE--LPLFD--LPEFDLES-LD 234
Query: 446 CVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGESNFFT 625
V+I+H HLDH GALP + + GY GP+YMT PT ++ +L ED KVA +R+G++ ++
Sbjct: 235 AVVITHAHLDHVGALPVLFKY-GYKGPVYMTEPTLHLSKLLFEDYIKVA-QREGKNELYS 292
Query: 626 SQMIKDCMKKVTAVTLHQSVMVDNELEIKAYYAGHVL 736
+ + + ++ + + E+ + Y AGH+L
Sbjct: 293 MRDVNSLLLNTYTLSYGEVTDIAPEIRLTFYRAGHIL 329
>UniRef50_Q4N0H3 Cluster: Putative uncharacterized protein; n=2;
Theileria|Rep: Putative uncharacterized protein -
Theileria parva
Length = 678
Score = 85.4 bits (202), Expect(2) = 1e-18
Identities = 33/58 (56%), Positives = 47/58 (81%)
Frame = +2
Query: 428 ITSQIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVER 601
+T+ +DC +ISHFHLDH GALP+++E IGY+GPIY+T+PT+A+ P+LL D +V R
Sbjct: 113 VTNSVDCSVISHFHLDHVGALPFLTEHIGYSGPIYLTYPTRALCPLLLRDSVQVTSTR 170
Score = 67.7 bits (158), Expect = 3e-10
Identities = 27/51 (52%), Positives = 36/51 (70%)
Frame = +2
Query: 260 MPDIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYI 412
M + IT LGAGQDVGRSCI++T K ++ DCG H G+ D+RR+PD +
Sbjct: 1 MSSVDITVLGAGQDVGRSCIVVTFPSKRVIFDCGAHCGFIDQRRYPDLQLL 51
Score = 30.7 bits (66), Expect(2) = 1e-18
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +2
Query: 593 VERKGESNFFTSQMIKDCMKKVTAVTLHQSVMVDNELEIKAYYAGHVL 736
+E + + ++ + +CMK+ + L + V N L + YYAGHVL
Sbjct: 206 IEERTDPWGYSLNSVAECMKRSIPLQLRATETVGN-LNLVPYYAGHVL 252
>UniRef50_Q8ZYD9 Cluster: MRNA 3'-end processing factor,
conjectural; n=4; Thermoproteaceae|Rep: MRNA 3'-end
processing factor, conjectural - Pyrobaculum aerophilum
Length = 634
Score = 94.3 bits (224), Expect = 3e-18
Identities = 54/154 (35%), Positives = 85/154 (55%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 448
I +T LGA +VGRS IL++ N++LDCG+ NDE FP I ++D
Sbjct: 174 ITVTFLGAAMEVGRSAILVSTTESNVLLDCGLKPAQNDE-EFPLLDLI-----DIDRLDA 227
Query: 449 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGESNFFTS 628
V+++H H+DH G LP++ + GY GP+YMT PTK A ILL D ++ ER+G ++
Sbjct: 228 VVLTHAHMDHVGCLPFLFK-YGYKGPVYMTDPTKYQAFILLSDYVELK-EREGLQPSYSK 285
Query: 629 QMIKDCMKKVTAVTLHQSVMVDNELEIKAYYAGH 730
I+ + + + + ++++ Y AGH
Sbjct: 286 ADIETVIYHTITLDYEEVTDIAPDIKLTFYDAGH 319
>UniRef50_Q6BMW3 Cluster: Endoribonuclease YSH1; n=2;
Saccharomycetaceae|Rep: Endoribonuclease YSH1 -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 815
Score = 94.3 bits (224), Expect = 3e-18
Identities = 57/172 (33%), Positives = 84/172 (48%), Gaps = 15/172 (8%)
Frame = +2
Query: 266 DIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQID 445
D K LG +VGRSC ++ K IMLD G+H G P + E + S++D
Sbjct: 13 DFKFFGLGGCNEVGRSCHIIEYKNKVIMLDAGVHPGLQGLSSLPFYD----EYDL-SKVD 67
Query: 446 CVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAV---------- 595
+++SHFHLDH +LPY+ + + G ++MTH TKAI LL D KV
Sbjct: 68 ILLVSHFHLDHAASLPYVMQHTNFNGRVFMTHATKAIYRWLLSDFVKVTSIGGGSDARLN 127
Query: 596 -----ERKGESNFFTSQMIKDCMKKVTAVTLHQSVMVDNELEIKAYYAGHVL 736
G SN +T + ++ + H ++ +D + AY+AGHVL
Sbjct: 128 NSDPNANTGSSNLYTDDDLMRSFDRIETIDYHSTIELDG-IRFTAYHAGHVL 178
>UniRef50_A7AWH8 Cluster: RNA-metabolising metallo-beta-lactamase
and metallo-beta-lactamase superfamily domain containing
protein; n=1; Babesia bovis|Rep: RNA-metabolising
metallo-beta-lactamase and metallo-beta-lactamase
superfamily domain containing protein - Babesia bovis
Length = 760
Score = 86.6 bits (205), Expect(2) = 6e-18
Identities = 34/58 (58%), Positives = 45/58 (77%)
Frame = +2
Query: 428 ITSQIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVER 601
ITS IDC IISHFHLDH GALP+++E +GY GP++MT+PT+ + PI+L D +V R
Sbjct: 117 ITSNIDCAIISHFHLDHIGALPFLTEHLGYKGPVFMTYPTRGLGPIMLRDSAQVVTSR 174
Score = 66.5 bits (155), Expect = 6e-10
Identities = 26/51 (50%), Positives = 36/51 (70%)
Frame = +2
Query: 260 MPDIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYI 412
M +KIT LGAGQDVGRSC+++T + I+ DCG H G+ D RR+P+ +
Sbjct: 1 MSTVKITMLGAGQDVGRSCVVVTFPSRRILFDCGAHCGFIDHRRYPELQLL 51
Score = 27.1 bits (57), Expect(2) = 6e-18
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +2
Query: 620 FTSQMIKDCMKKVTAVTLHQSVMVDNELEIKAYYAGHVL 736
+T + D + + + L S + N + I YYAGHVL
Sbjct: 214 YTVDCVADSLSRAHVMQLKSSQTLGN-MRITPYYAGHVL 251
>UniRef50_Q4UBM2 Cluster: Cleavage and polyadenylation specificty
factor, subunit, putative; n=4; Piroplasmida|Rep:
Cleavage and polyadenylation specificty factor, subunit,
putative - Theileria annulata
Length = 1282
Score = 93.1 bits (221), Expect = 6e-18
Identities = 53/171 (30%), Positives = 87/171 (50%), Gaps = 15/171 (8%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 448
++IT LGAG +VGRSC+ + +M DCG+H + P F E S+++
Sbjct: 5 VRITVLGAGCEVGRSCVYVERDNSCLMFDCGLHPALSGVGALPVF-----EAVDISKVEV 59
Query: 449 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAV----------- 595
+++HFHLDHCGA+PY+ + G I MT TK+I +L D ++
Sbjct: 60 CLVTHFHLDHCGAVPYLLSKTKFNGRILMTPATKSICHLLWTDYARMEQLLTVKTIFDDD 119
Query: 596 ----ERKGESNFFTSQMIKDCMKKVTAVTLHQSVMVDNELEIKAYYAGHVL 736
E S ++ + ++ + ++ + HQ + V N+++I Y AGHVL
Sbjct: 120 DGMDELVCGSGLYSFEDVEYALDRIETIDFHQEITV-NDIKISCYRAGHVL 169
>UniRef50_A5N1D0 Cluster: Putative uncharacterized protein; n=1;
Clostridium kluyveri DSM 555|Rep: Putative
uncharacterized protein - Clostridium kluyveri DSM 555
Length = 832
Score = 92.7 bits (220), Expect = 8e-18
Identities = 50/159 (31%), Positives = 86/159 (54%)
Frame = +2
Query: 257 IMPDIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITS 436
+M ++ I+ LG ++VG SCIL+ + +NI++DCG+ + + PDF I +G
Sbjct: 1 MMYNMNISFLGGAREVGGSCILVKIYNRNILMDCGIRQS-SSKDALPDFKSIQEQG---- 55
Query: 437 QIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGESN 616
ID +IISH H+DH G+LP +S+ IY T TK + +LL D K+ R+GE
Sbjct: 56 GIDAIIISHSHMDHIGSLPIISKEYP-LARIYATKMTKDLMRVLLYDSLKIMNNREGEIP 114
Query: 617 FFTSQMIKDCMKKVTAVTLHQSVMVDNELEIKAYYAGHV 733
+ +K+ + + + + ++++ Y AGH+
Sbjct: 115 LYAESDVKNMLNSIFPINYMVEFPIFQDVKLTFYMAGHI 153
>UniRef50_A6QXP5 Cluster: Putative uncharacterized protein; n=1;
Ajellomyces capsulatus NAm1|Rep: Putative
uncharacterized protein - Ajellomyces capsulatus NAm1
Length = 925
Score = 92.7 bits (220), Expect = 8e-18
Identities = 52/154 (33%), Positives = 80/154 (51%), Gaps = 3/154 (1%)
Frame = +2
Query: 284 LGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISH 463
LG G +VGRSC ++ GK +MLD GMH + P F S +D ++ISH
Sbjct: 30 LGGGNEVGRSCHIIQYKGKTVMLDAGMHPAKDGFAALPFFDDFD-----LSTVDILLISH 84
Query: 464 FHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERKG---ESNFFTSQM 634
FHLDH +LPY+ + G ++MTH TKAI L++D +V+ + +T Q
Sbjct: 85 FHLDHSASLPYVLSKTNFRGRVFMTHATKAIYKWLIQDNVRVSNTSSSSDQRTTLYTEQD 144
Query: 635 IKDCMKKVTAVTLHQSVMVDNELEIKAYYAGHVL 736
+ + A+ + + ++N + I + AGHVL
Sbjct: 145 HLSTLSHIEAIDFNTTHTINN-IRITPFPAGHVL 177
>UniRef50_A1RTJ6 Cluster: Beta-lactamase domain protein; n=1;
Pyrobaculum islandicum DSM 4184|Rep: Beta-lactamase
domain protein - Pyrobaculum islandicum (strain DSM 4184
/ JCM 9189)
Length = 640
Score = 91.9 bits (218), Expect = 1e-17
Identities = 53/154 (34%), Positives = 85/154 (55%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 448
I +T LGA +VGRS IL++ NI+LDCG+ G DE DF + + ++D
Sbjct: 180 ITVTFLGAAMEVGRSAILVSTTESNILLDCGLKPGQYDE----DFPLL--DAVDIDRLDA 233
Query: 449 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGESNFFTS 628
V+++H H+DH G LP++ + GY GP+YMT PTK ILL D ++ ER+G F+
Sbjct: 234 VVLTHAHMDHVGCLPFLYK-YGYRGPVYMTDPTKYQTFILLMDYIELK-EREGLEPAFSR 291
Query: 629 QMIKDCMKKVTAVTLHQSVMVDNELEIKAYYAGH 730
++ + + + + ++++ Y AGH
Sbjct: 292 ADVESVIYHTITLDYEEVTDIAPDVKLTFYDAGH 325
>UniRef50_A5BWZ3 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 344
Score = 90.6 bits (215), Expect = 3e-17
Identities = 42/75 (56%), Positives = 56/75 (74%), Gaps = 1/75 (1%)
Frame = +2
Query: 515 YT-GPIYMTHPTKAIAPILLEDMRKVAVERKGESNFFTSQMIKDCMKKVTAVTLHQSVMV 691
YT G + +PTKA++P++LED RKV V+R+GE F++ I CMKKV AV L Q+V V
Sbjct: 147 YTLGSFCLQYPTKALSPLMLEDYRKVMVDRRGEQELFSNDDIMKCMKKVIAVDLKQTVQV 206
Query: 692 DNELEIKAYYAGHVL 736
D +L+I+AYYAGHVL
Sbjct: 207 DKDLQIRAYYAGHVL 221
Score = 89.4 bits (212), Expect = 8e-17
Identities = 36/60 (60%), Positives = 45/60 (75%)
Frame = +2
Query: 287 GAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISHF 466
GAGQ+VG+SC ++T+ GK IM DCGMHMGY D RRFPDFS I + IDC++I+HF
Sbjct: 33 GAGQEVGKSCAVVTINGKRIMFDCGMHMGYLDHRRFPDFSLISKSADFNTAIDCIVITHF 92
>UniRef50_Q5BEP0 Cluster: Endoribonuclease ysh1; n=15;
Pezizomycotina|Rep: Endoribonuclease ysh1 - Emericella
nidulans (Aspergillus nidulans)
Length = 884
Score = 90.2 bits (214), Expect = 5e-17
Identities = 51/154 (33%), Positives = 75/154 (48%), Gaps = 3/154 (1%)
Frame = +2
Query: 284 LGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISH 463
LG G +VGRSC ++ GK +MLD GMH P F S +D ++ISH
Sbjct: 29 LGGGNEVGRSCHIIQYKGKTVMLDAGMHPAKEGFSALPFFDEFD-----LSTVDILLISH 83
Query: 464 FHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLED---MRKVAVERKGESNFFTSQM 634
FH+DH ALPY+ + G ++MTH TKAI L++D + A + +T
Sbjct: 84 FHVDHSSALPYVLSKTNFKGRVFMTHATKAIYKWLIQDNVRVNNTASSSDQRTTLYTEHD 143
Query: 635 IKDCMKKVTAVTLHQSVMVDNELEIKAYYAGHVL 736
+ + + + + + N + I Y AGHVL
Sbjct: 144 HLSTLPLIETIDFNTTHTI-NSIRITPYPAGHVL 176
>UniRef50_Q74MJ3 Cluster: NEQ076; n=1; Nanoarchaeum equitans|Rep:
NEQ076 - Nanoarchaeum equitans
Length = 635
Score = 89.8 bits (213), Expect = 6e-17
Identities = 50/158 (31%), Positives = 89/158 (56%), Gaps = 2/158 (1%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGY--NDERRFPDFSYIVPEGPITSQI 442
++++ LG VGRS +LL I+LD G+ + N++ +P +PE + ++
Sbjct: 189 VRVSFLGGASQVGRSALLLQTKESRILLDFGVDLSLPPNNKNAYPIVE--LPEFDV-KEL 245
Query: 443 DCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGESNFF 622
D V+I+H HLDH G +P++ +M GY GP+Y+T PT IA + L D ++A E F
Sbjct: 246 DAVVITHAHLDHVGFVPFLYKM-GYKGPVYLTPPTLDIATLSLLDYLRIANE--NNVKLF 302
Query: 623 TSQMIKDCMKKVTAVTLHQSVMVDNELEIKAYYAGHVL 736
+ I++ +K + Q+ + +++++ Y AGH+L
Sbjct: 303 SGDDIRNFVKHSITIEYGQTTDIASDVKLTFYNAGHIL 340
>UniRef50_UPI000049831F Cluster: cleavage and polyadenylation
specificity factor 73 kDa subunit, putative; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: cleavage and
polyadenylation specificity factor 73 kDa subunit,
putative - Entamoeba histolytica HM-1:IMSS
Length = 755
Score = 88.6 bits (210), Expect = 1e-16
Identities = 52/157 (33%), Positives = 87/157 (55%), Gaps = 1/157 (0%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGY-NDERRFPDFSYIVPEGPITSQID 445
++I PLGAG++VGRSC +L G NIMLDCG+H + E P F + I S I+
Sbjct: 21 LEIRPLGAGREVGRSCFILKYMGHNIMLDCGVHPAKPHGEAALPLFEH----ADIDS-IE 75
Query: 446 CVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGESNFFT 625
+ ++H+H+DHC +LPY+ + G + MT PTK I L ++ +++ +
Sbjct: 76 LLCVTHYHVDHCASLPYLILERQFKGKVLMTPPTKEIFGELFKEFHQMSSTIQPPK---- 131
Query: 626 SQMIKDCMKKVTAVTLHQSVMVDNELEIKAYYAGHVL 736
S K+ + ++ + H+ + N ++I + AGH+L
Sbjct: 132 SVNPKEVIDRIDTIKFHE-LQEYNGMKIWCFNAGHIL 167
>UniRef50_Q4S6C2 Cluster: Chromosome 9 SCAF14729, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 9 SCAF14729, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 698
Score = 87.0 bits (206), Expect = 4e-16
Identities = 35/42 (83%), Positives = 42/42 (100%)
Frame = +2
Query: 260 MPDIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDE 385
MP+IK+TPLGAGQDVGRSCIL+++GGKNIMLDCGMHMG+ND+
Sbjct: 1 MPEIKVTPLGAGQDVGRSCILVSIGGKNIMLDCGMHMGFNDD 42
Score = 56.0 bits (129), Expect = 9e-07
Identities = 33/92 (35%), Positives = 49/92 (53%)
Frame = +1
Query: 400 FLLHCPGRPYNESD*LRYYITFSPRSLRCTALYVRNDWLYRPYLHDTPD*SHSTNPSRGY 579
F + P RP + L + F LR +AL+ R+ L RP+LHD P H +P+ G
Sbjct: 75 FFVRDPERPPDGLFGLCDHQPFPSGPLRRSALHERDGGLRRPHLHDPPHQGHLPHPAGGL 134
Query: 580 EESRSGAQR*VKLLHFPND*RLYEKSDSCDSP 675
+E + +LLH P+D RL+E+S S + P
Sbjct: 135 QEDHRRQEGRNQLLHLPDDQRLHEESGSSEPP 166
>UniRef50_A5KD85 Cluster: Cleavage and polyadenylation specifity
factor protein, putative; n=2; Plasmodium vivax|Rep:
Cleavage and polyadenylation specifity factor protein,
putative - Plasmodium vivax
Length = 858
Score = 86.2 bits (204), Expect = 7e-16
Identities = 40/110 (36%), Positives = 63/110 (57%)
Frame = +2
Query: 260 MPDIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQ 439
M +I I LG +VGRSC+++ ++IMLDCG+H + P + + S+
Sbjct: 1 MNNINIVCLGGASEVGRSCVIIESANRSIMLDCGIHPAFMGIGCLPIY-----DAYDISK 55
Query: 440 IDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKV 589
+D +I+HFH+DH GALPY+ + G +YMT TK+I +L D ++
Sbjct: 56 VDLCLITHFHMDHSGALPYLVNRTRFKGKVYMTEATKSICYLLWNDYARI 105
>UniRef50_A0RXV0 Cluster: Cleavage and polyadenylation specificity
factor/metal-dependent RNase; n=1; Cenarchaeum
symbiosum|Rep: Cleavage and polyadenylation specificity
factor/metal-dependent RNase - Cenarchaeum symbiosum
Length = 645
Score = 86.2 bits (204), Expect = 7e-16
Identities = 53/160 (33%), Positives = 84/160 (52%), Gaps = 3/160 (1%)
Frame = +2
Query: 266 DIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMG-YNDERRFPDFSYIVPEGPITSQI 442
+I +T LG VGRSC+LL+ +++DCG++ G + +P + G +
Sbjct: 187 EISLTALGGFGQVGRSCMLLSTLDSKVLVDCGVNPGAAHPSESYPRLDW---AGITLDDL 243
Query: 443 DCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGESNFF 622
D V+I H HLDH G LP +++ GY GPIY T PT + ++ D KVA +G +
Sbjct: 244 DAVVIGHAHLDHTGFLPVLAK-YGYRGPIYCTEPTLPMMNLIQLDAIKVAT-AQGRVPVY 301
Query: 623 TSQMIKDCMKKVTAVTLHQSVMVDNELEIKAYY--AGHVL 736
+ ++ M++ A+TL + D +IK AGH+L
Sbjct: 302 AERDVRQIMRQ--AITLPYGTVTDISPDIKLVLANAGHIL 339
>UniRef50_Q9HS54 Cluster: MRNA 3'-end processing factor homolog;
n=10; Euryarchaeota|Rep: MRNA 3'-end processing factor
homolog - Halobacterium salinarium (Halobacterium
halobium)
Length = 641
Score = 85.0 bits (201), Expect = 2e-15
Identities = 47/156 (30%), Positives = 84/156 (53%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 448
+++T LG ++VGR+ +L+ I++DCG G DE + + G T ID
Sbjct: 182 VRVTTLGCCREVGRASFVLSTPETRILVDCGDKPGSEDEVPYLQVQEALAGGANT--IDA 239
Query: 449 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGESNFFTS 628
VI++H HLDH +P + + GY GPIY T PT+ + +L D VA ++G + + S
Sbjct: 240 VILTHAHLDHSAFIPLLFK-YGYDGPIYCTEPTRDLMGLLTLDYLDVAA-KEGRAPPYDS 297
Query: 629 QMIKDCMKKVTAVTLHQSVMVDNELEIKAYYAGHVL 736
+M+++ +K + + ++++ + AGH+L
Sbjct: 298 EMVREAIKHCIPLEYGDVTDIAPDVKLTFHNAGHIL 333
>UniRef50_Q9YEQ9 Cluster: Putative exonuclease; n=1; Aeropyrum
pernix|Rep: Putative exonuclease - Aeropyrum pernix
Length = 671
Score = 83.4 bits (197), Expect = 5e-15
Identities = 50/157 (31%), Positives = 87/157 (55%), Gaps = 1/157 (0%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMH-MGYNDERRFPDFSYIVPEGPITSQID 445
+++ LG+ +VGRS IL+ G ++LD G+ GY + +P Y PE + ++D
Sbjct: 192 VRVVGLGSFGEVGRSAILVDTGESKVLLDAGLSPSGYGPDS-YP--YYWSPEFRV-DELD 247
Query: 446 CVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGESNFFT 625
V+ISH HLDH G LP + + G+ GP+Y T PT+ I I+L D+ + + +GE F
Sbjct: 248 AVVISHAHLDHVGTLPLLFK-YGFRGPVYATPPTRDIMIIVLRDLINLMRKAQGEPP-FE 305
Query: 626 SQMIKDCMKKVTAVTLHQSVMVDNELEIKAYYAGHVL 736
+ ++ + ++ V + V ++++ AGH+L
Sbjct: 306 PRDVEKALTRLIPVNYNTVTDVAPDIKMTFINAGHIL 342
>UniRef50_Q9UXE8 Cluster: MRNA 3'-end polyadenylation factor; n=6;
Thermoprotei|Rep: MRNA 3'-end polyadenylation factor -
Sulfolobus solfataricus
Length = 639
Score = 83.4 bits (197), Expect = 5e-15
Identities = 46/158 (29%), Positives = 86/158 (54%), Gaps = 2/158 (1%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYN--DERRFPDFSYIVPEGPITSQI 442
++IT LG +VGRS +L+ ++LD G++ N E+ FP + ++
Sbjct: 183 VRITALGGFLEVGRSAVLVETPESKVLLDVGLNPSANMFGEKLFPKLDI---DQLKMEEL 239
Query: 443 DCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGESNFF 622
D V+I+H HLDHCG +P++ + GY GP+Y T PT+ I ++ D VA E++G+ +
Sbjct: 240 DAVVITHAHLDHCGMVPFLFK-YGYEGPVYTTVPTRDIMALMQLDSLDVA-EKEGKPIPY 297
Query: 623 TSQMIKDCMKKVTAVTLHQSVMVDNELEIKAYYAGHVL 736
+++ ++ + + + + ++ + Y AGH+L
Sbjct: 298 SAKEVRKELLHTITLDYGEVTDIAPDIRLTFYNAGHIL 335
>UniRef50_Q72GW5 Cluster: Cleavage and polyadenylation specificity
factor, 100 kDa subunit; n=2; Thermus thermophilus|Rep:
Cleavage and polyadenylation specificity factor, 100 kDa
subunit - Thermus thermophilus (strain HB27 / ATCC
BAA-163 / DSM 7039)
Length = 431
Score = 82.2 bits (194), Expect = 1e-14
Identities = 43/110 (39%), Positives = 61/110 (55%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 448
++I P GA ++V S LL GG+ ++LDCGM G + R F + P ++D
Sbjct: 1 MRIVPFGAAREVTGSAHLLLAGGRRVLLDCGMFQGKEEARNHAPFGF----DP--KEVDA 54
Query: 449 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVE 598
V+++H HLDH G LP + GY GP+Y T T + I+LED KV E
Sbjct: 55 VLLTHAHLDHVGRLPKLFRE-GYRGPVYATRATALLMEIVLEDALKVMDE 103
>UniRef50_Q7RRQ3 Cluster: Cleavage and polyadenylation specificity
factor, 73 kDa subunit; n=7; Plasmodium|Rep: Cleavage
and polyadenylation specificity factor, 73 kDa subunit -
Plasmodium yoelii yoelii
Length = 942
Score = 82.2 bits (194), Expect = 1e-14
Identities = 40/110 (36%), Positives = 62/110 (56%)
Frame = +2
Query: 260 MPDIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQ 439
M +I I LG +VGRSC+++ +IMLDCG+H + P + + S+
Sbjct: 1 MSNINIVCLGGASEVGRSCVIIESEKTSIMLDCGIHPAFMGIGCLPIY-----DAYDISK 55
Query: 440 IDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKV 589
ID +I+HFH+DH GALPY+ + G ++MT TK+I +L D ++
Sbjct: 56 IDVCLITHFHMDHSGALPYLINKTRFKGRVFMTEATKSICYLLWSDYARI 105
>UniRef50_Q18IP5 Cluster: Predicted metal-dependent RNase, consists
of a metallo-beta-lactamase domain and an RNA-binding KH
domain; n=1; Haloquadratum walsbyi DSM 16790|Rep:
Predicted metal-dependent RNase, consists of a
metallo-beta-lactamase domain and an RNA-binding KH
domain - Haloquadratum walsbyi (strain DSM 16790)
Length = 538
Score = 80.2 bits (189), Expect = 5e-14
Identities = 48/141 (34%), Positives = 70/141 (49%), Gaps = 5/141 (3%)
Frame = +2
Query: 260 MPDIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQ 439
M D+ +TP G G +VGRSC L G + +DCG+ E +P F E Q
Sbjct: 1 MSDLIVTPRGGGDEVGRSCYHLQAGDYDYFIDCGLKQSETPE--YPLF-----EDVSQGQ 53
Query: 440 IDCVIISHFHLDHCGALPYMSE--MIGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGES 613
ID V I+H H+DH G LP ++ I+MT PT A+A ILL D ++ + E
Sbjct: 54 IDAVFITHAHIDHIGGLPVAEHHGLLDDDASIFMTRPTNALASILLHDSLQIHKQETAEL 113
Query: 614 N---FFTSQMIKDCMKKVTAV 667
N FT+ I+ + ++ +
Sbjct: 114 NQPQQFTATDIEQVLSRIMTI 134
>UniRef50_A7QCN8 Cluster: Chromosome chr12 scaffold_78, whole genome
shotgun sequence; n=12; Eukaryota|Rep: Chromosome chr12
scaffold_78, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 662
Score = 79.0 bits (186), Expect = 1e-13
Identities = 41/101 (40%), Positives = 58/101 (57%)
Frame = +2
Query: 434 SQIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGES 613
S ID ++++HFHLDH +LPY E + G ++MTH TKAI +LL D KV+ + E
Sbjct: 42 STIDVLLVTHFHLDHAASLPYFLEKTTFKGRVFMTHATKAIYKLLLSDYVKVS-KVSVED 100
Query: 614 NFFTSQMIKDCMKKVTAVTLHQSVMVDNELEIKAYYAGHVL 736
+ Q I M K+ + HQ++ V N + Y AGHVL
Sbjct: 101 MLYDEQDILRSMDKIEVIDFHQTLEV-NGIRFWCYTAGHVL 140
>UniRef50_A7DQ83 Cluster: Beta-lactamase domain protein; n=1;
Candidatus Nitrosopumilus maritimus SCM1|Rep:
Beta-lactamase domain protein - Candidatus
Nitrosopumilus maritimus SCM1
Length = 646
Score = 78.6 bits (185), Expect = 1e-13
Identities = 51/160 (31%), Positives = 80/160 (50%), Gaps = 3/160 (1%)
Frame = +2
Query: 266 DIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDER-RFPDFSYIVPEGPITSQI 442
++ + LG VGRS +LL+ I++DCG++ G FP + +
Sbjct: 188 EVSLYTLGGFGQVGRSSLLLSTPESKILIDCGINPGARSPMDAFPRLDSL---NLTLDDL 244
Query: 443 DCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGESNFF 622
D V+I H HLDH G LP + + GY GPIY T PT + ++ D KVA +G + +
Sbjct: 245 DAVVIGHAHLDHTGFLPTLCK-YGYKGPIYCTEPTLPMMNLIQLDAIKVAA-AQGRTPIY 302
Query: 623 TSQMIKDCMKKVTAVTLHQSVMVDNELEIKAYY--AGHVL 736
+ + +K M++ +TL + D +IK AGH+L
Sbjct: 303 SERDVKQIMRQ--TITLPYGTVTDISPDIKLVLANAGHIL 340
>UniRef50_Q0LL72 Cluster: Beta-lactamase-like; n=3; Herpetosiphon
aurantiacus ATCC 23779|Rep: Beta-lactamase-like -
Herpetosiphon aurantiacus ATCC 23779
Length = 786
Score = 78.2 bits (184), Expect = 2e-13
Identities = 50/164 (30%), Positives = 83/164 (50%), Gaps = 8/164 (4%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYN-DERRFPDFSYIVPEGPITSQID 445
I P G Q+VG SC +L +G ++I++D GM + R PD + +G +D
Sbjct: 2 ISFHPFGGAQEVGASCGILKLGMRHILVDAGMRPAARPGQSRTPDLEAL--KG---FPLD 56
Query: 446 CVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLED----MRKVAVERKGES 613
++I+H H+DH G LP ++ + T PIY T T A+ ILL D M + + + E+
Sbjct: 57 AILITHAHIDHTGCLPLVASLFP-TVPIYATESTIALMRILLLDSARIMEQEHLAHELET 115
Query: 614 NFFTSQMIKDCMKKVTAVTLHQS---VMVDNELEIKAYYAGHVL 736
+ M+ + + ++ V HQ V + E+ + AGH+L
Sbjct: 116 PLYDQAMVTETLARIIPVAFHQELRPVAANQEISVTYLPAGHIL 159
>UniRef50_A4XI93 Cluster: Beta-lactamase domain protein; n=1;
Caldicellulosiruptor saccharolyticus DSM 8903|Rep:
Beta-lactamase domain protein - Caldicellulosiruptor
saccharolyticus (strain ATCC 43494 / DSM 8903)
Length = 821
Score = 78.2 bits (184), Expect = 2e-13
Identities = 45/156 (28%), Positives = 79/156 (50%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 448
++I LG ++VG SC+L+ GGKNI+LD G+ M E + P+ + G D
Sbjct: 1 MEIVFLGGAKEVGASCVLIKAGGKNILLDSGIRM---KEDKLPNLQLLRELG----GADV 53
Query: 449 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGESNFFTS 628
+ISH HLDH G+LP ++ + Y PTK + +LL D K+ ++ E +
Sbjct: 54 CLISHAHLDHIGSLPLIAREYPHIF-FYTNQPTKDLIKVLLYDSLKIMDAKEDEIPIYAE 112
Query: 629 QMIKDCMKKVTAVTLHQSVMVDNELEIKAYYAGHVL 736
+ ++D + + + + +++ + AGH+L
Sbjct: 113 KNVEDLLDRTITYGFNYTFEPLEGIKVTFFPAGHIL 148
>UniRef50_A5K7P0 Cluster: RNA-metabolising metallo-beta-lactamase
domain containing protein; n=1; Plasmodium vivax|Rep:
RNA-metabolising metallo-beta-lactamase domain
containing protein - Plasmodium vivax
Length = 911
Score = 78.2 bits (184), Expect = 2e-13
Identities = 50/131 (38%), Positives = 72/131 (54%), Gaps = 28/131 (21%)
Frame = +2
Query: 428 ITSQIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVA----- 592
I IDCVIISHFH+DH GALP+ +E++ Y G I M++PTKA++PILL D +VA
Sbjct: 106 INEMIDCVIISHFHMDHIGALPFFTEILKYRGTILMSYPTKALSPILLLDGCRVADLKWE 165
Query: 593 ----------VERKGES--NFFTSQMIKD-----------CMKKVTAVTLHQSVMVDNEL 703
+ K + N+ S + KD C+ KV + ++++ + N +
Sbjct: 166 KQNFERQIKLLNEKSDELLNYNISSLKKDPWNISEEQIYSCIGKVVGLQINETFQMGN-M 224
Query: 704 EIKAYYAGHVL 736
I YYAGHVL
Sbjct: 225 SITPYYAGHVL 235
Score = 66.1 bits (154), Expect = 8e-10
Identities = 25/49 (51%), Positives = 37/49 (75%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIV 415
I I LGAGQ VGRSC+++ + + +M DCG H+GY DER++P+F+ +V
Sbjct: 9 IVIRVLGAGQTVGRSCVIVELENRRVMFDCGSHLGYKDERKYPNFNLLV 57
>UniRef50_Q5ZWR4 Cluster: Metallo-beta lactamase family; n=4;
Legionella pneumophila|Rep: Metallo-beta lactamase
family - Legionella pneumophila subsp. pneumophila
(strain Philadelphia 1 /ATCC 33152 / DSM 7513)
Length = 453
Score = 77.4 bits (182), Expect = 3e-13
Identities = 46/103 (44%), Positives = 63/103 (61%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 448
+K+T LGA + V S LLT+G K I++DCG+ GY E R +++ + P P ID
Sbjct: 1 MKLTFLGATETVTGSKYLLTIGSKKILIDCGLFQGYK-ELRLRNWAPL-PIDP--HDIDA 56
Query: 449 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLED 577
VII+H H+DH G LP + + G+ G IY T TKA+ ILL D
Sbjct: 57 VIITHAHIDHSGYLPLLVKN-GFQGKIYTTPGTKALCSILLPD 98
>UniRef50_A4CGY6 Cluster: Putative uncharacterized protein; n=4;
Flavobacteriales|Rep: Putative uncharacterized protein -
Robiginitalea biformata HTCC2501
Length = 458
Score = 77.4 bits (182), Expect = 3e-13
Identities = 56/168 (33%), Positives = 85/168 (50%), Gaps = 12/168 (7%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 448
I I LGA V S LL G + I++DCG+ G E R ++ Y P +T +ID
Sbjct: 6 INIHFLGAAGTVTGSKYLLDTGDRKILIDCGLFQGLK-ELRLKNWEY--PPVNVT-EIDA 61
Query: 449 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKV---AVERKGESNF 619
V+++H HLDH G LP + + G+ GPIY T+PT IA I+L D K+ ER + +
Sbjct: 62 VLLTHGHLDHTGYLPRLVKQ-GFKGPIYGTYPTLDIAKIILNDSAKIQEQEAERANKGGY 120
Query: 620 FTSQM------IKDCMKKV---TAVTLHQSVMVDNELEIKAYYAGHVL 736
+KD K + + L+Q + + ++ + Y GH+L
Sbjct: 121 SKHSPAEPLYDLKDVEKTIPYFKGIPLNQWLPILKNVKARFQYNGHIL 168
>UniRef50_Q9RZ85 Cluster: Cleavage and polyadenylation specificity
factor-related protein; n=2; Deinococcus|Rep: Cleavage
and polyadenylation specificity factor-related protein -
Deinococcus radiodurans
Length = 499
Score = 76.6 bits (180), Expect = 6e-13
Identities = 41/110 (37%), Positives = 66/110 (60%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 448
+++ GA V S LLT+GG+++++DCG+ G ++ R S+ P P + +D
Sbjct: 14 MQMQSFGAACTVTGSMHLLTLGGRHLLVDCGLFQGGDELERRNRESF--PFEP--ASLDA 69
Query: 449 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVE 598
V+++H HLDH G LP + + GY GP+Y T PT A+A +L D ++ VE
Sbjct: 70 VLLTHAHLDHVGRLPLLVRL-GYRGPVYCTPPTAALAETVLLDSARLQVE 118
>UniRef50_Q6MLH4 Cluster: Predicted exonuclease of the
beta-lactamase family; n=2; Proteobacteria|Rep:
Predicted exonuclease of the beta-lactamase family -
Bdellovibrio bacteriovorus
Length = 452
Score = 76.2 bits (179), Expect = 8e-13
Identities = 54/165 (32%), Positives = 82/165 (49%), Gaps = 14/165 (8%)
Frame = +2
Query: 284 LGAGQDVGRSCILLTMGGKNIMLDCGMHMGYND--ERRFPDFSYIVPEGPITSQIDCVII 457
LGA V S L+ I++DCGM G+ + E + DF P P I V++
Sbjct: 6 LGAAGTVTGSKFLVHNNDTRILVDCGMFQGFKELRELNWEDF----PFDP--RDIQAVVL 59
Query: 458 SHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVE------RKGESN- 616
+H HLDHCGALP + + G+ GPIY T PT + I+L D K+ E +KG S
Sbjct: 60 THAHLDHCGALPLLVKK-GFKGPIYCTEPTLELTKIILLDSAKIQEEDADYANKKGFSKH 118
Query: 617 -----FFTSQMIKDCMKKVTAVTLHQSVMVDNELEIKAYYAGHVL 736
+T++ ++ + + V LH + L++ Y +GH+L
Sbjct: 119 SPALALYTTEDVERTLPLLRPVNLHTQFEI-GSLKVCFYSSGHIL 162
>UniRef50_Q7QRM8 Cluster: GLP_171_24040_22178; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_171_24040_22178 - Giardia lamblia
ATCC 50803
Length = 620
Score = 75.8 bits (178), Expect = 1e-12
Identities = 39/113 (34%), Positives = 58/113 (51%), Gaps = 5/113 (4%)
Frame = +2
Query: 266 DIKITPLGAGQDVGRSCILLTMGGK-NIMLDCGMHMGYNDERRFPDFSYIVPEG---PIT 433
DI + PLG +G SC L+ +G K + +LDCG+ D R P F + +
Sbjct: 9 DIVVIPLGMSPRIGNSCYLVIVGSKVSFLLDCGLRTSAPDGERVPSFKLKCLQDMGYSLE 68
Query: 434 SQIDCVIISHFHLDHCGALPYMSEMI-GYTGPIYMTHPTKAIAPILLEDMRKV 589
+D +IISH H DH GALP++ + + P+Y T TK + P + D +V
Sbjct: 69 RDLDFIIISHAHFDHSGALPFLFSLFPNFNRPVYTTEATKFLLPQMYADYDRV 121
>UniRef50_UPI00004992E1 Cluster: cleavage and polyadenylation
specificity factor subunit, putative; n=1; Entamoeba
histolytica HM-1:IMSS|Rep: cleavage and polyadenylation
specificity factor subunit, putative - Entamoeba
histolytica HM-1:IMSS
Length = 452
Score = 75.4 bits (177), Expect = 1e-12
Identities = 46/157 (29%), Positives = 77/157 (49%), Gaps = 1/157 (0%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPE-GPITSQID 445
+K+ G G+ VG SC+++ I+ DCG YN R PD I+S+I
Sbjct: 1 MKVHVFGGGKSVGSSCVVVEGKEDAILFDCG----YNPVR--PDVGIDFSRMNAISSKIR 54
Query: 446 CVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGESNFFT 625
+ I+HFH+DH G LP++++ + PIY++ PT+A+ +++ D+ +N F
Sbjct: 55 AICITHFHVDHVGMLPWLTKFMDV--PIYLSEPTQALLSLIINDIH-------SGNNLFC 105
Query: 626 SQMIKDCMKKVTAVTLHQSVMVDNELEIKAYYAGHVL 736
C+ + + + V L I+ YAGH L
Sbjct: 106 QADFDKCILQCKPIDPTMTKRVTQNLSIRCIYAGHAL 142
>UniRef50_O77371 Cluster: Cleavage and polyadenylation specificity
factor protein, putative; n=7; Plasmodium|Rep: Cleavage
and polyadenylation specificity factor protein, putative
- Plasmodium falciparum (isolate 3D7)
Length = 1017
Score = 75.4 bits (177), Expect = 1e-12
Identities = 34/64 (53%), Positives = 46/64 (71%)
Frame = +2
Query: 428 ITSQIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERKG 607
I IDCVIISHFH+DH GALP+ +E++ Y G I M++PTKA++PILL D +V +
Sbjct: 166 INEIIDCVIISHFHMDHIGALPFFTEILKYRGIILMSYPTKALSPILLLDSCRVTDMKWE 225
Query: 608 ESNF 619
+ NF
Sbjct: 226 KKNF 229
Score = 66.1 bits (154), Expect = 8e-10
Identities = 26/53 (49%), Positives = 39/53 (73%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGP 427
I I LGAGQ VGRSC+++ + + +M DCG H+GY DER++P+F+ ++ GP
Sbjct: 9 IIIQVLGAGQTVGRSCVIVELENRKVMFDCGCHLGYKDERKYPNFNLLI-RGP 60
>UniRef50_A3ERC5 Cluster: Putative RNA-processing exonuclease; n=1;
Leptospirillum sp. Group II UBA|Rep: Putative
RNA-processing exonuclease - Leptospirillum sp. Group II
UBA
Length = 479
Score = 74.5 bits (175), Expect = 2e-12
Identities = 42/105 (40%), Positives = 58/105 (55%)
Frame = +2
Query: 287 GAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISHF 466
GA V SC LL + G I++DCG+ G ++ F S + P G S I VI++H
Sbjct: 7 GAASCVTGSCHLLDVDGFRILIDCGLFQG--EDELFS--SNLKPFGFEPSSISAVILTHA 62
Query: 467 HLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVER 601
HLDHCG LP + G+ GP+Y T PT+ + I+L D + ER
Sbjct: 63 HLDHCGRLPTLVRQ-GFRGPVYATSPTRYLTEIVLWDAAHLQEER 106
>UniRef50_A6C193 Cluster: Exonuclease of the beta-lactamase fold
involved in RNA processing; n=1; Planctomyces maris DSM
8797|Rep: Exonuclease of the beta-lactamase fold
involved in RNA processing - Planctomyces maris DSM 8797
Length = 464
Score = 74.1 bits (174), Expect = 3e-12
Identities = 39/110 (35%), Positives = 59/110 (53%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 448
+KIT LGA +V S L+ + I+LDCG+ G+ E + + P +D
Sbjct: 1 MKITFLGAAGEVTGSQHLIETDSRRILLDCGLFQGHRQESYLKNSRFAYP----PESLDA 56
Query: 449 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVE 598
V +SH H+DHCG LP + G+ GP++ T T IA I+L+D ++ E
Sbjct: 57 VFLSHGHMDHCGNLPRLFNK-GFRGPVFCTSATADIAEIMLKDSARIQEE 105
>UniRef50_Q73MR4 Cluster: Metallo-beta-lactamase family protein;
n=1; Treponema denticola|Rep: Metallo-beta-lactamase
family protein - Treponema denticola
Length = 470
Score = 72.1 bits (169), Expect = 1e-11
Identities = 46/170 (27%), Positives = 82/170 (48%), Gaps = 14/170 (8%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 448
IK LGA ++V S +L + G ++DCG G E + + VP +++
Sbjct: 3 IKFYSLGAAEEVTGSKHILEVDGHKYLIDCGAFQGKRAEADKKNRDFNVP----APELEA 58
Query: 449 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVE---------- 598
VI++H H DHCG LP + + G+TG IY T T+ IA +++ D ++
Sbjct: 59 VILTHGHYDHCGLLPLLGKH-GFTGNIYATPATRDIANLVMMDSARIQARDREYLSKQAA 117
Query: 599 RKGES----NFFTSQMIKDCMKKVTAVTLHQSVMVDNELEIKAYYAGHVL 736
+KGE+ F + + + ++ H+ + ++++ Y AGH+L
Sbjct: 118 KKGETFKWVPLFDEADVIQTVNQFVTISYHRPAWIGPNVQLEFYDAGHIL 167
>UniRef50_Q0HMU8 Cluster: RNA-metabolizing metallo-beta-lactamase;
n=16; Shewanella|Rep: RNA-metabolizing
metallo-beta-lactamase - Shewanella sp. (strain MR-4)
Length = 480
Score = 71.7 bits (168), Expect = 2e-11
Identities = 42/112 (37%), Positives = 61/112 (54%), Gaps = 1/112 (0%)
Frame = +2
Query: 284 LGAGQDVGRSCILLTMGGKNIMLDCGMHMGYN-DERRFPDFSYIVPEGPITSQIDCVIIS 460
LGA ++V SC LLT+ G+ ++LDCG+ G DE R + P+ I V++S
Sbjct: 8 LGATEEVTGSCHLLTIAGQQMLLDCGLIQGGKADELRNHERFSFDPQA-----ISAVVLS 62
Query: 461 HFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGESN 616
H H+DH G LP + + GYTGPIY T + I+L+D + V +N
Sbjct: 63 HAHIDHSGRLPLLVK-AGYTGPIYTHKATAELCAIMLKDAAMLQVRDTERNN 113
>UniRef50_A6VTF2 Cluster: RNA-metabolising metallo-beta-lactamase;
n=14; Proteobacteria|Rep: RNA-metabolising
metallo-beta-lactamase - Marinomonas sp. MWYL1
Length = 477
Score = 71.7 bits (168), Expect = 2e-11
Identities = 38/106 (35%), Positives = 60/106 (56%), Gaps = 1/106 (0%)
Frame = +2
Query: 287 GAGQDVGRSCI-LLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISH 463
GA Q V SC L +++++DCG+ G D + + + I S + ++I+H
Sbjct: 8 GAVQGVTGSCHELFVDSDQSVLVDCGLFQGAETSGSGADSNSLEIDFDI-SAVQALVITH 66
Query: 464 FHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVER 601
H+DH G LPY+ G+TGPIY + P+ A+ P+++ED KV V R
Sbjct: 67 VHIDHVGRLPYLLAA-GFTGPIYCSKPSAALLPLVIEDALKVGVTR 111
>UniRef50_Q2RJ88 Cluster: RNA-metabolising metallo-beta-lactamase;
n=5; Bacteria|Rep: RNA-metabolising
metallo-beta-lactamase - Moorella thermoacetica (strain
ATCC 39073)
Length = 536
Score = 71.3 bits (167), Expect = 2e-11
Identities = 44/121 (36%), Positives = 65/121 (53%), Gaps = 5/121 (4%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYN--DERRFPDFSYIVPEGPITSQI 442
IK+ GA V SC LL G +++DCG+ G ER + F P P I
Sbjct: 2 IKLQFCGAAGTVTGSCYLLDTGRYRLLIDCGLFQGSKAIKERNYGPF----PFNP--GAI 55
Query: 443 DCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLED---MRKVAVERKGES 613
D +I++H H+DHCG +P + + G+ GPI+ T T +A +LL D ++++ VERK
Sbjct: 56 DALILTHAHIDHCGLIPKL-YLQGFKGPIFTTPVTAELARVLLPDCGHIQEMEVERKNRK 114
Query: 614 N 616
N
Sbjct: 115 N 115
>UniRef50_Q15V20 Cluster: RNA-metabolising metallo-beta-lactamase;
n=1; Pseudoalteromonas atlantica T6c|Rep:
RNA-metabolising metallo-beta-lactamase -
Pseudoalteromonas atlantica (strain T6c / BAA-1087)
Length = 467
Score = 71.3 bits (167), Expect = 2e-11
Identities = 41/98 (41%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Frame = +2
Query: 287 GAGQDVGRSCILLTMGG-KNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISH 463
GA Q+V SC L+ I+LDCGMH G + R D + P P + ID V++SH
Sbjct: 8 GAAQEVTGSCHLIESASFGKILLDCGMHQGGSSIDRIGDEGF--PFNP--ASIDAVLLSH 63
Query: 464 FHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLED 577
HLDH G LP + G+TGPIY T T + ++L+D
Sbjct: 64 AHLDHSGMLPKLVH-DGFTGPIYCTSETADLLVVMLQD 100
>UniRef50_Q7QYP3 Cluster: GLP_393_23867_26140; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_393_23867_26140 - Giardia lamblia
ATCC 50803
Length = 757
Score = 70.9 bits (166), Expect = 3e-11
Identities = 49/174 (28%), Positives = 80/174 (45%), Gaps = 18/174 (10%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMG----GKNIMLDCGMHMGYNDERRFPDFSYI--VPEGPI 430
+K+TPLGAG +VGRSC +L+ +IMLDCG+H ++ R + +
Sbjct: 29 VKLTPLGAGNEVGRSCFILSYQRSGCSGSIMLDCGLHPALSETRDYVAIQALPFFDLEDY 88
Query: 431 TSQIDCVIISHFHLDHCGALPYM------------SEMIGYTGPIYMTHPTKAIAPILLE 574
S + ++I+HFH DH ALPY+ + Y P+YMT PT L+
Sbjct: 89 VSTLSLILITHFHNDHIAALPYLLRCLRDRAVKEGKPELHYIPPVYMTAPT-------LK 141
Query: 575 DMRKVAVERKGESNFFTSQMIKDCMKKVTAVTLHQSVMVDNELEIKAYYAGHVL 736
++ + ++ +T + ++ K +T N + A AGHV+
Sbjct: 142 IFKESVTDVISQTKLYTHEDVEFMAKNTKLLTSFYQTERVNGISFTAMPAGHVI 195
>UniRef50_Q2LYC2 Cluster: Metallo-beta-lactamase protein; n=6;
Deltaproteobacteria|Rep: Metallo-beta-lactamase protein
- Syntrophus aciditrophicus (strain SB)
Length = 541
Score = 70.1 bits (164), Expect = 5e-11
Identities = 41/104 (39%), Positives = 57/104 (54%), Gaps = 1/104 (0%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYND-ERRFPDFSYIVPEGPITSQID 445
+KI LGA + V SC +L G +DCGMH G + E+R + PE +I+
Sbjct: 7 MKIKFLGAARTVTGSCYILETQGHRFAIDCGMHQGNEEIEKRNWNVELYEPE-----KIE 61
Query: 446 CVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLED 577
+I+H H+DH G LP + + G+ GPIY T PT + ILL D
Sbjct: 62 FFLITHAHIDHTGLLPRLVQK-GFRGPIYATQPTVDLLRILLLD 104
>UniRef50_A5KKJ4 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus torques ATCC 27756|Rep: Putative
uncharacterized protein - Ruminococcus torques ATCC
27756
Length = 534
Score = 69.7 bits (163), Expect = 7e-11
Identities = 41/104 (39%), Positives = 59/104 (56%), Gaps = 1/104 (0%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPI-TSQID 445
+K+T +GA +V SC L GKNI++DCGM G PD Y P PI ++ID
Sbjct: 1 MKLTFVGAAHEVTGSCHFLQAAGKNILIDCGMEQG-------PDL-YENPGLPIPENEID 52
Query: 446 CVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLED 577
V ++H H+DH G LP +++ G+ G I+ T T + I+L D
Sbjct: 53 YVFLTHAHIDHSGMLPKLAKN-GFKGQIFTTFATADLCNIMLRD 95
>UniRef50_Q3ZY44 Cluster: Metallo-beta-lactamase family protein;
n=3; Dehalococcoides|Rep: Metallo-beta-lactamase family
protein - Dehalococcoides sp. (strain CBDB1)
Length = 468
Score = 69.3 bits (162), Expect = 9e-11
Identities = 42/111 (37%), Positives = 61/111 (54%), Gaps = 1/111 (0%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYN-DERRFPDFSYIVPEGPITSQID 445
IKI LGA Q+V S LL +++DCG++ + R + F + PE ++
Sbjct: 3 IKIQFLGAAQNVTGSRYLLQTDHTRLLVDCGLYQERHLQNRNWQPFD-VPPES-----LN 56
Query: 446 CVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVE 598
V++SH H+DHCG LP + + GY GP+Y+T T IA I L D K+ E
Sbjct: 57 AVLVSHAHIDHCGLLPKLVK-DGYNGPVYLTAATAEIARISLADAGKIQEE 106
>UniRef50_UPI00015BD54C Cluster: UPI00015BD54C related cluster; n=1;
unknown|Rep: UPI00015BD54C UniRef100 entry - unknown
Length = 451
Score = 68.9 bits (161), Expect = 1e-10
Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 1/126 (0%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 448
+K+ GA + V S +L + + I++DCG+ G DE + + + E +D
Sbjct: 1 MKVISYGAAKTVTGSAHMLILDDEKILIDCGLFQGV-DEEKSEELGFDPKE------VDA 53
Query: 449 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVER-KGESNFFT 625
V+++H H+DHCG +P + + G+ G IY T PT ++ ++L D KV +E K F
Sbjct: 54 VLLTHAHIDHCGRIPMLIKN-GFKGKIYCTRPTYELSRLMLLDTAKVMLENYKSHMKRFQ 112
Query: 626 SQMIKD 643
IK+
Sbjct: 113 RGTIKE 118
>UniRef50_A5ZRP6 Cluster: Putative uncharacterized protein; n=4;
Bacteria|Rep: Putative uncharacterized protein -
Ruminococcus obeum ATCC 29174
Length = 539
Score = 68.9 bits (161), Expect = 1e-10
Identities = 49/170 (28%), Positives = 81/170 (47%), Gaps = 14/170 (8%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPIT-SQID 445
+KIT +GA +V SC L GK ++DCGM G PD+ Y + P+ S +D
Sbjct: 1 MKITFIGATHEVTGSCYYLEAAGKKFLVDCGMEQG-------PDY-YENQDIPVKGSDLD 52
Query: 446 CVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAV---------- 595
V+++H H+DH G LP + G+ GPIY T T + I+L D + +
Sbjct: 53 FVLLTHAHMDHSGNLPAIYAK-GFQGPIYATQATCHLCDIMLRDSAHIQMFEAEWRNRKG 111
Query: 596 ERKGESNFFTSQMIKDCM---KKVTAVTLHQSVMVDNELEIKAYYAGHVL 736
R+G+ F + ++D M + +++ + ++ AGH+L
Sbjct: 112 RRQGKPEFVPAYTMEDAMGVIQNFVPCPYEKTIKPAEGISVRFVDAGHLL 161
>UniRef50_A1S0I1 Cluster: Beta-lactamase domain protein; n=1;
Thermofilum pendens Hrk 5|Rep: Beta-lactamase domain
protein - Thermofilum pendens (strain Hrk 5)
Length = 441
Score = 68.5 bits (160), Expect = 2e-10
Identities = 45/157 (28%), Positives = 78/157 (49%), Gaps = 1/157 (0%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDER-RFPDFSYIVPEGPITSQID 445
+++ LG ++ GRSC+ L GG+ + D G+ Y+ + P F ++ G +++
Sbjct: 1 MRLVFLGGYREQGRSCLALEHGGRYYVFDVGVKKVYSGGKYGEPPFLGLIDAG----KVE 56
Query: 446 CVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGESNFFT 625
V +SH H DH A+P + G+ GPIYM+ PT A + ++ K V + FT
Sbjct: 57 AVFVSHLHEDHLAAVPALVRR-GFNGPIYMSAPT---AELGIKQWYKWTVLEEDGKPLFT 112
Query: 626 SQMIKDCMKKVTAVTLHQSVMVDNELEIKAYYAGHVL 736
+ + K V V SV+ ++E+ + +GH L
Sbjct: 113 EEDCDEARKMVKTVG-DGSVVTSGDVEVAFHQSGHAL 148
>UniRef50_O17403 Cluster: Probable cleavage and polyadenylation
specificity factor subunit 2; n=2; Caenorhabditis|Rep:
Probable cleavage and polyadenylation specificity factor
subunit 2 - Caenorhabditis elegans
Length = 843
Score = 68.5 bits (160), Expect = 2e-10
Identities = 48/158 (30%), Positives = 73/158 (46%), Gaps = 2/158 (1%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 448
IK+ +D G C LL + G I+LDCG + RF Y P +I
Sbjct: 5 IKLKVFSGAKDEGPLCYLLQVDGDYILLDCGW------DERF-GLQYFEELKPFIPKISA 57
Query: 449 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGESNFFTS 628
V+ISH H G LPY+ G T P+Y T P + + + DM ++ + E +T
Sbjct: 58 VLISHPDPLHLGGLPYLVSKCGLTAPVYATVPVYKMGQMFIYDMVYSHLDVE-EFEHYTL 116
Query: 629 QMIKDCMKKVTAVTLHQSVMV--DNELEIKAYYAGHVL 736
+ +KV V +Q+V++ D+ + A AGH+L
Sbjct: 117 DDVDTAFEKVEQVKYNQTVVLKGDSGVHFTALPAGHML 154
>UniRef50_UPI00015BB212 Cluster: beta-lactamase domain protein; n=1;
Ignicoccus hospitalis KIN4/I|Rep: beta-lactamase domain
protein - Ignicoccus hospitalis KIN4/I
Length = 428
Score = 67.7 bits (158), Expect = 3e-10
Identities = 47/156 (30%), Positives = 77/156 (49%), Gaps = 2/156 (1%)
Frame = +2
Query: 272 KITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCV 451
+IT LG ++VGR+ + G +++LD G+ D FP+ Y+ P+ + V
Sbjct: 4 EITFLGGAREVGRAAYWVKDGKASLLLDYGVSFDEEDRPVFPE--YVSPK-----DVGAV 56
Query: 452 IISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGESNFFTSQ 631
++SH HLDH GALP + I P YMT TK + IL+ D K++ G +
Sbjct: 57 VLSHAHLDHSGALPMLYSAI--RRPAYMTKLTKELTAILINDFLKLS----GYYATYGET 110
Query: 632 MIKDCMKKVTAVTLHQSVMVDNE--LEIKAYYAGHV 733
+K+ ++ V V ++V + + Y AGH+
Sbjct: 111 EVKEFLESVRTVDYRRTVEIPEAGGTLLTFYDAGHI 146
>UniRef50_Q55BS1 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 784
Score = 67.7 bits (158), Expect = 3e-10
Identities = 49/161 (30%), Positives = 74/161 (45%), Gaps = 5/161 (3%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 448
IK T L +D C LL + I+LDCG+ YN DFS + P + +ID
Sbjct: 5 IKFTALSGAKDESPPCYLLEIDDFCILLDCGL--SYN-----LDFSLLEPLEKVAKKIDA 57
Query: 449 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGESNFFTS 628
V++SH H G LPY+ G TG IY T P + + L D+ + + ++ E ++
Sbjct: 58 VLLSHSDTTHIGGLPYVVGKYGLTGTIYGTTPVLKMGTMFLYDLYENKMSQE-EFQQYSL 116
Query: 629 QMIKDCMK----KVTAVTLHQSVMVDNE-LEIKAYYAGHVL 736
I C K + + H S+ + + I Y AGH +
Sbjct: 117 DNIDSCFGEDRFKELSFSQHYSLSGKGKGISITPYLAGHTI 157
>UniRef50_Q4AMZ9 Cluster: Beta-lactamase-like:RNA-metabolising
metallo-beta-lactamase; n=2; Chlorobium|Rep:
Beta-lactamase-like:RNA-metabolising
metallo-beta-lactamase - Chlorobium phaeobacteroides BS1
Length = 462
Score = 67.3 bits (157), Expect = 4e-10
Identities = 37/102 (36%), Positives = 60/102 (58%), Gaps = 1/102 (0%)
Frame = +2
Query: 287 GAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISHF 466
GA + SC +L + G+ I+LDCG+ G +E + P P +ID V++SH
Sbjct: 7 GATSRITGSCHILRIDGRRILLDCGLVQGREEEEALNREPF--PFDP--REIDAVVLSHG 62
Query: 467 HLDHCGALPYMSEMIGYTGPIYMTHP-TKAIAPILLEDMRKV 589
H+DH G +P + + G+ GP+Y THP T+ +A +LL+D ++
Sbjct: 63 HIDHSGRVPLLVKK-GFDGPVY-THPATRDLALVLLQDSARL 102
>UniRef50_Q9LKF9 Cluster: Cleavage and polyadenylation specificity
factor subunit 2; n=8; Magnoliophyta|Rep: Cleavage and
polyadenylation specificity factor subunit 2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 739
Score = 67.3 bits (157), Expect = 4e-10
Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 5/161 (3%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 448
+++TPL + L+++ G N ++DCG +ND D S + P + S ID
Sbjct: 5 VQVTPLCGVYNENPLSYLVSIDGFNFLIDCG----WND---LFDTSLLEPLSRVASTIDA 57
Query: 449 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGESNF--F 622
V++SH H GALPY + +G + P+Y T P + + + D + RK S+F F
Sbjct: 58 VLLSHPDTLHIGALPYAMKQLGLSAPVYATEPVHRLGLLTMYDQ---FLSRKQVSDFDLF 114
Query: 623 TSQMIKDCMKKVTAVTLHQSVMVDNELE---IKAYYAGHVL 736
T I + V +T Q+ + + E I + AGH+L
Sbjct: 115 TLDDIDSAFQNVIRLTYSQNYHLSGKGEGIVIAPHVAGHML 155
>UniRef50_Q194D1 Cluster: Beta-lactamase-like; n=3; Clostridia|Rep:
Beta-lactamase-like - Desulfitobacterium hafniense
(strain DCB-2)
Length = 570
Score = 66.9 bits (156), Expect = 5e-10
Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 15/171 (8%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYN--DERRFPDFSYIVPEGPITSQI 442
+K+ GA Q V S L+ G +++DCG+ G E + DF Y P +++
Sbjct: 1 MKLYFYGAAQVVTGSSYLVESEGYRVLIDCGLFQGSKALKELNYGDFPY----NP--AEL 54
Query: 443 DCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLED---MRKVAVERKGE- 610
+ VI++H H DH G +P + + G+ G IY T T + ++L D ++++ VERK
Sbjct: 55 NAVILTHAHTDHSGLIPKLIK-YGFQGKIYATPETIKLCSVMLPDSGHIQEMEVERKNRK 113
Query: 611 ---------SNFFTSQMIKDCMKKVTAVTLHQSVMVDNELEIKAYYAGHVL 736
+ +T+Q +D +K T QS + E+ + AGH+L
Sbjct: 114 LKRASQDLLTPIYTAQDAQDSLKFFTPAQYDQSTQLSPEISFTFHDAGHIL 164
>UniRef50_Q3AAG6 Cluster: Metallo-beta-lactamase family protein;
n=2; Carboxydothermus hydrogenoformans|Rep:
Metallo-beta-lactamase family protein - Carboxydothermus
hydrogenoformans (strain Z-2901 / DSM 6008)
Length = 504
Score = 66.5 bits (155), Expect = 6e-10
Identities = 38/117 (32%), Positives = 65/117 (55%), Gaps = 5/117 (4%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYN--DERRFPDFSYIVPEGPITSQI 442
+++T GA V SC L + G ++DCG+ G ER + +F P P +I
Sbjct: 1 MELTFFGAADTVTGSCYLFNVAGHKFLVDCGLFQGPKAIKERNYGEF----PFNP--REI 54
Query: 443 DCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLED---MRKVAVERK 604
+ ++++H H+DH G +P + + G+ G IY T PT +A ++L D ++++ VERK
Sbjct: 55 EFILLTHAHIDHSGLIPKLVKK-GFKGTIYATEPTVDLAAVMLPDSGHVQEMEVERK 110
>UniRef50_A4VJP5 Cluster: Metallo-beta-lactamase superfamily
protein; n=11; Gammaproteobacteria|Rep:
Metallo-beta-lactamase superfamily protein - Pseudomonas
stutzeri (strain A1501)
Length = 505
Score = 66.5 bits (155), Expect = 6e-10
Identities = 35/103 (33%), Positives = 55/103 (53%), Gaps = 1/103 (0%)
Frame = +2
Query: 284 LGAGQDVGRSCILL-TMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIIS 460
LGA Q V SC L+ T G ++L+CGMH G +E ++ +D V++S
Sbjct: 43 LGAIQQVTGSCYLIETHDGARVLLECGMHQGRREEESDNRAAFAFDP----KSLDAVVLS 98
Query: 461 HFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKV 589
H H+DH G LP + +GY GP++ T T + ++L D ++
Sbjct: 99 HAHIDHSGLLPRL-VALGYRGPVHCTEATAELLELMLLDSAQI 140
>UniRef50_Q60355 Cluster: Uncharacterized protein MJ0047; n=6;
Methanococcales|Rep: Uncharacterized protein MJ0047 -
Methanococcus jannaschii
Length = 428
Score = 66.5 bits (155), Expect = 6e-10
Identities = 43/149 (28%), Positives = 73/149 (48%)
Frame = +2
Query: 287 GAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISHF 466
GA +VGRSCI + I+LDCG+ +G + Y + + I +D V ISH
Sbjct: 7 GAALEVGRSCIEIKTDKSKILLDCGVKLG-------KEIEYPILDNSI-RDVDKVFISHA 58
Query: 467 HLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGESNFFTSQMIKDC 646
HLDH GALP + P+ T +K + +LL+DM K+A E + + + + +K+
Sbjct: 59 HLDHSGALPVLFHR-KMDVPVITTELSKKLIKVLLKDMVKIA-ETENKKIPYNNHDVKEA 116
Query: 647 MKKVTAVTLHQSVMVDNELEIKAYYAGHV 733
++ + + + + + AGH+
Sbjct: 117 IRHTIPLNYNDKKYY-KDFSYELFSAGHI 144
>UniRef50_Q7UMQ3 Cluster: Cleavage and polyadenylation specifity
factor-related protein; n=1; Pirellula sp.|Rep: Cleavage
and polyadenylation specifity factor-related protein -
Rhodopirellula baltica
Length = 488
Score = 66.1 bits (154), Expect = 8e-10
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 2/166 (1%)
Frame = +2
Query: 245 VVKLIMPDIKITPLGAGQDVGRSCILLTMG-GKNIMLDCGMHMGYNDERRFPDFSYIVPE 421
+V L+M +K+ GA + V SC L + +++++DCG G D R+ P+ PE
Sbjct: 37 LVLLLMSLMKLVHHGAHEGVTGSCHQLWIDDSQSLLVDCGTFQG-EDARKKPN-----PE 90
Query: 422 GPITSQ-IDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVE 598
+ + I ++++H H+DH G +PY+ G+ PI + PT + P+++ED K+
Sbjct: 91 IEFSLRGIQALLLTHVHIDHAGRIPYLL-AAGFDHPILCSAPTAKLLPLVMEDALKIGFT 149
Query: 599 RKGESNFFTSQMIKDCMKKVTAVTLHQSVMVDNELEIKAYYAGHVL 736
R S + + K + + HQ ++++ AGHVL
Sbjct: 150 R---SKRLIKKFLGQIRKLLVPLPYHQWHDCPGGVKVRLLPAGHVL 192
>UniRef50_A3HWA3 Cluster: Metallo-beta-lactamase family protein;
n=1; Algoriphagus sp. PR1|Rep: Metallo-beta-lactamase
family protein - Algoriphagus sp. PR1
Length = 482
Score = 66.1 bits (154), Expect = 8e-10
Identities = 45/169 (26%), Positives = 79/169 (46%), Gaps = 12/169 (7%)
Frame = +2
Query: 266 DIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQID 445
D+ + LG V S L+ +G ++DCG++ G + R+ + +P + ++
Sbjct: 18 DVTVKFLGGAGAVTGSKYLIDLGDFEFLVDCGLYQGAKNLRKRNWDKFPMPP----TDME 73
Query: 446 CVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVE------RKG 607
+I++H HLDH G LP + + G+ GPIY T T +A ILL D K+ E +KG
Sbjct: 74 AIILTHAHLDHVGYLPKLVKQ-GFKGPIYCTEATAELAKILLLDSGKLQEEEAEYARKKG 132
Query: 608 ESN------FFTSQMIKDCMKKVTAVTLHQSVMVDNELEIKAYYAGHVL 736
S +T + ++ ++ + + Y+AGH+L
Sbjct: 133 YSRHESPEPLYTRDDAESVFPQLVPQQFETPFQINPNVSVTYYHAGHIL 181
>UniRef50_Q9YFR8 Cluster: Putative exonuclease; n=1; Aeropyrum
pernix|Rep: Putative exonuclease - Aeropyrum pernix
Length = 420
Score = 66.1 bits (154), Expect = 8e-10
Identities = 42/154 (27%), Positives = 77/154 (50%)
Frame = +2
Query: 272 KITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCV 451
+I LG+G++VGR+ IL+ GG+ ++LD G++ ND FP + P +D +
Sbjct: 3 RIRILGSGREVGRAAILVESGGRGLLLDYGVNFDENDRPVFP--GDVRPR-----DLDGL 55
Query: 452 IISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGESNFFTSQ 631
+++H HLDH GA PY+ + ++ T T ++ +LL DM K+ G + +
Sbjct: 56 VLTHSHLDHIGAAPYL--YVSQGPKVFGTRVTLHVSRLLLYDMIKL----NGAYLPYDER 109
Query: 632 MIKDCMKKVTAVTLHQSVMVDNELEIKAYYAGHV 733
++D + + + K +Y+GH+
Sbjct: 110 SVEDMLGTAEYIDYGREYEA-GRFAFKTFYSGHI 142
>UniRef50_Q8ZTD5 Cluster: MRNA 3'-end processing factor,
conjectural; n=5; Thermoproteaceae|Rep: MRNA 3'-end
processing factor, conjectural - Pyrobaculum aerophilum
Length = 430
Score = 65.7 bits (153), Expect = 1e-09
Identities = 43/155 (27%), Positives = 72/155 (46%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 448
+KI LG +VGR +L+ I+LD G+ ND+ FP ++ P +
Sbjct: 1 MKIRLLGGAGEVGRLAVLIKTASNGILLDYGVSFDANDKPVFP--LHVRPR-----DLTA 53
Query: 449 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGESNFFTS 628
+SH HLDH G LP S + P+Y T T ++ ++ D A++ G +T
Sbjct: 54 TFLSHAHLDHSGGLP--SLYVSTKTPLYSTPLTMELSDLMYTD----AIKLSGYYLPYTL 107
Query: 629 QMIKDCMKKVTAVTLHQSVMVDNELEIKAYYAGHV 733
+ +++ M +T + V + + I Y AGH+
Sbjct: 108 EEVRETMSSAVPLTYGEPVEIGRDAVITVYNAGHI 142
>UniRef50_Q8KET4 Cluster: Metallo-beta-lactamase superfamily
protein; n=9; Bacteria|Rep: Metallo-beta-lactamase
superfamily protein - Chlorobium tepidum
Length = 469
Score = 65.3 bits (152), Expect = 1e-09
Identities = 46/159 (28%), Positives = 76/159 (47%), Gaps = 9/159 (5%)
Frame = +2
Query: 287 GAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISHF 466
GA + V SC +L G ++LDCG+ G + + P P S+ID V++SH
Sbjct: 7 GATRRVTGSCHILRAAGYTVLLDCGLVQGSREVEALNREPF--PFEP--SEIDAVVLSHG 62
Query: 467 HLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVA------VERKGESN---F 619
H+DH G LP + G+ GPIY H T + ILL D ++ + + G+ +
Sbjct: 63 HIDHSGRLPLLVNR-GFRGPIYTHHGTIELCEILLRDSATLSENDARFMRKHGQRDDEPL 121
Query: 620 FTSQMIKDCMKKVTAVTLHQSVMVDNELEIKAYYAGHVL 736
+T + C++++ V + V + + AGH+L
Sbjct: 122 YTVDDAQRCVRQMEGVRYGERREVLPGIAVTLLDAGHIL 160
>UniRef50_A1RXC5 Cluster: Beta-lactamase domain protein; n=1;
Thermofilum pendens Hrk 5|Rep: Beta-lactamase domain
protein - Thermofilum pendens (strain Hrk 5)
Length = 428
Score = 65.3 bits (152), Expect = 1e-09
Identities = 42/112 (37%), Positives = 64/112 (57%)
Frame = +2
Query: 257 IMPDIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITS 436
IM D+ + LGA ++VGRS ILL + GK I+LD G+ + +E +FP + P+G
Sbjct: 4 IMADVYLKALGAAREVGRSAILLGVEGKLILLDYGVSI-EGEEPQFP--LPVPPKG---- 56
Query: 437 QIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVA 592
I V ISH HLDH GA P + + P+ T T ++ +L++D K++
Sbjct: 57 -IHAVAISHAHLDHSGAAPLL--YVSGQPPLISTPLTATLSDLLIKDFMKLS 105
>UniRef50_A6E886 Cluster: Metallo-beta-lactamase superfamily
protein; n=1; Pedobacter sp. BAL39|Rep:
Metallo-beta-lactamase superfamily protein - Pedobacter
sp. BAL39
Length = 460
Score = 64.9 bits (151), Expect = 2e-09
Identities = 45/167 (26%), Positives = 81/167 (48%), Gaps = 11/167 (6%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 448
+K+T GA + V S LL + NI++DCG+ Y E + Y P P + +D
Sbjct: 1 MKLTIWGAARQVTGSMHLLQLKDYNILIDCGLD--YEKETYQEENQYF-PFDP--ADLDV 55
Query: 449 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERK-------- 604
VI++H H+DH G LP + M G+ G I T PT ++ +LL D + + ++
Sbjct: 56 VILTHAHIDHSGNLPTLVRM-GFQGQILCTPPTADLSELLLLDSVNIFLSKQQKRSKGKN 114
Query: 605 ---GESNFFTSQMIKDCMKKVTAVTLHQSVMVDNELEIKAYYAGHVL 736
G + + + D +++ V H+ +++++ + GH+L
Sbjct: 115 RSSGPKPLYLQKHVMDTVERFVTVGFHKQFRINDQVTLCFIPVGHLL 161
>UniRef50_A4J2E1 Cluster: Beta-lactamase domain protein; n=1;
Desulfotomaculum reducens MI-1|Rep: Beta-lactamase
domain protein - Desulfotomaculum reducens MI-1
Length = 525
Score = 64.9 bits (151), Expect = 2e-09
Identities = 39/112 (34%), Positives = 61/112 (54%), Gaps = 5/112 (4%)
Frame = +2
Query: 284 LGAGQDVGRSCILLTMGGKNIMLDCGMHMGYND--ERRFPDFSYIVPEGPITSQIDCVII 457
LGA Q V SC L+ G +++DCG+ G + ER + +F P P S +D +++
Sbjct: 6 LGAAQTVTGSCFLVEAGATRLLVDCGLFQGSKEIKERNYRNF----PLAP--SSVDFILL 59
Query: 458 SHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLED---MRKVAVERK 604
+H H+DH G LP + G+ G + T T + ILL D ++++ VERK
Sbjct: 60 THAHIDHSGLLPKFIKQ-GFKGKVIATSATVDLCEILLPDCGHIQEMEVERK 110
>UniRef50_Q11BH9 Cluster: Beta-lactamase-like; n=6;
Proteobacteria|Rep: Beta-lactamase-like - Mesorhizobium
sp. (strain BNC1)
Length = 452
Score = 64.5 bits (150), Expect = 3e-09
Identities = 38/103 (36%), Positives = 58/103 (56%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 448
+ +T LG V S LLT G + I++DCG+ G + R ++ + P P S ID
Sbjct: 2 LTLTSLGGAGTVTGSKHLLTNGDRRILIDCGLFQGLKNLREL-NWEPL-PVAP--SSIDA 57
Query: 449 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLED 577
V+++H HLDH G LP + G+ G IY T T+ +A ++L+D
Sbjct: 58 VVLTHAHLDHSGYLPKLVR-DGFKGRIYATAATRDVAELILKD 99
>UniRef50_A7CRQ7 Cluster: Beta-lactamase domain protein; n=1;
Opitutaceae bacterium TAV2|Rep: Beta-lactamase domain
protein - Opitutaceae bacterium TAV2
Length = 452
Score = 64.5 bits (150), Expect = 3e-09
Identities = 44/163 (26%), Positives = 78/163 (47%), Gaps = 8/163 (4%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 448
+K+T L +G +C LL +G N+++D G+H + PDF+ + +ID
Sbjct: 1 MKLTDLNRQGGIGANCTLLQIGDINLVIDSGLHPKIAGRQAVPDFAKL-----RNLEIDL 55
Query: 449 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGESN---- 616
++++H HLDH G+LP + P+ M+ ++ + +L + V +K E N
Sbjct: 56 ILVTHCHLDHIGSLPVLMRE-HPRPPVMMSTASQMLVERMLHNSANVMKRQKEEDNIPEY 114
Query: 617 -FFTSQMIKDCMKKVTAVTL-HQSVM--VDNELEIKAYYAGHV 733
FT + I + T + H +E+EI ++AGHV
Sbjct: 115 PLFTHEDIDRLAPRFTGIPFGHPKKFRPHKDEIEITLHHAGHV 157
>UniRef50_A2EDT7 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 700
Score = 64.5 bits (150), Expect = 3e-09
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 1/157 (0%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 448
I PL Q LL + +LDCG + ++ R D I + I S ++
Sbjct: 8 ISFQPLSGAQSTTPFAYLLHVDEFTFLLDCG----WTEDFRLED---IQTQIEICSHVNA 60
Query: 449 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGESNFFTS 628
V++SH ++H GALPY+ G + PI+ T P A+ +L+ D + + + E F +
Sbjct: 61 VLLSHASIEHIGALPYLCSH-GLSAPIFATMPIPALGSLLIYD-SYLNIRDEEEFKEFNA 118
Query: 629 QMIKDCMKKVTAVTLHQSVMVDNE-LEIKAYYAGHVL 736
I +K+ +T QS +D + + I Y AG+ L
Sbjct: 119 NDIDQAFQKINRMTYQQSEQLDGKNITITPYNAGNTL 155
>UniRef50_A7DPN0 Cluster: Beta-lactamase domain protein; n=1;
Candidatus Nitrosopumilus maritimus SCM1|Rep:
Beta-lactamase domain protein - Candidatus
Nitrosopumilus maritimus SCM1
Length = 421
Score = 64.5 bits (150), Expect = 3e-09
Identities = 46/156 (29%), Positives = 75/156 (48%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 448
+ + LGA +VGRS L+ G N++LD G+ G RR Y + P +D
Sbjct: 1 MNVKVLGAANEVGRSGFLVNCNGTNLLLDYGVLFG----RRGTPPQYPLHVKP--KDLDA 54
Query: 449 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGESNFFTS 628
+II+H HLDH G +P S + +Y T PT ++ +L+EDM K+ + S+ F
Sbjct: 55 IIITHAHLDHSGNVP--SLFVSGNTDVYATPPTFDLSKLLIEDMLKI----EKNSHPFDL 108
Query: 629 QMIKDCMKKVTAVTLHQSVMVDNELEIKAYYAGHVL 736
+ + M+ + Q + N + +GHV+
Sbjct: 109 PELNNMMRNAKEIGFKQKITKGN-ATFELRESGHVI 143
>UniRef50_Q8RBU2 Cluster: Predicted exonuclease of the
beta-lactamase fold involved in RNA processing; n=4;
Clostridia|Rep: Predicted exonuclease of the
beta-lactamase fold involved in RNA processing -
Thermoanaerobacter tengcongensis
Length = 541
Score = 64.1 bits (149), Expect = 3e-09
Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 2/105 (1%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMG--YNDERRFPDFSYIVPEGPITSQI 442
+KIT LGA ++V SC L+ ++DCGM G DE + +F + + + I
Sbjct: 1 MKITFLGAAKEVTGSCYLVETENARFLVDCGMFQGGEVEDELNYQEFIFDIKD------I 54
Query: 443 DCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLED 577
D V+++H H+DH G +P + + GY IY TH T + +L D
Sbjct: 55 DFVLLTHAHIDHSGRIPVLYKR-GYRKRIYATHATVDLCRYMLPD 98
>UniRef50_Q57626 Cluster: Uncharacterized protein MJ0162; n=6;
Methanococcales|Rep: Uncharacterized protein MJ0162 -
Methanococcus jannaschii
Length = 421
Score = 64.1 bits (149), Expect = 3e-09
Identities = 42/150 (28%), Positives = 65/150 (43%)
Frame = +2
Query: 287 GAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISHF 466
G Q +G SC+ + ++LDCGM + + D +D VI+SH
Sbjct: 8 GGCQQIGMSCVEVETQKGRVLLDCGMSPDTGEIPKVDD-----------KAVDAVIVSHA 56
Query: 467 HLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGESNFFTSQMIKDC 646
HLDHCGA+P+ IY THPT + I D + K E I+
Sbjct: 57 HLDHCGAIPFYK-----FKKIYCTHPTADLMFITWRDTLNLTKAYKEED-------IQHA 104
Query: 647 MKKVTAVTLHQSVMVDNELEIKAYYAGHVL 736
M+ + + ++ + ++ K Y AGH+L
Sbjct: 105 MENIECLNYYEERQITENIKFKFYNAGHIL 134
>UniRef50_Q896M4 Cluster: Cleavage and polyadenylation specificity
factor; n=3; Clostridiaceae|Rep: Cleavage and
polyadenylation specificity factor - Clostridium tetani
Length = 506
Score = 63.7 bits (148), Expect = 4e-09
Identities = 36/103 (34%), Positives = 58/103 (56%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 448
+KI GA V SC L+ + K I+LDCG++ G +++ R + P+ +ID
Sbjct: 1 MKIEFFGAASCVTGSCHLVKIKDKKILLDCGLYQGKDEKERGNETFNFNPK-----EIDY 55
Query: 449 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLED 577
VI+SH H+DH G +P + + G+ G + T TK ++ I+L D
Sbjct: 56 VILSHAHIDHSGRIPLLYKK-GFKGRVICTEGTKDLSSIMLLD 97
>UniRef50_A0JWK6 Cluster: Beta-lactamase domain protein; n=2;
Bacteria|Rep: Beta-lactamase domain protein -
Arthrobacter sp. (strain FB24)
Length = 461
Score = 62.9 bits (146), Expect = 8e-09
Identities = 37/101 (36%), Positives = 51/101 (50%), Gaps = 3/101 (2%)
Frame = +2
Query: 284 LGAGQDVGRSCILLTMGGKNIMLDCGMHMGY---NDERRFPDFSYIVPEGPITSQIDCVI 454
LGA V S L+ GK I++DCG+ GY D R P P P ID ++
Sbjct: 12 LGATDSVTGSRYLVEAAGKRILVDCGLFQGYKVLRDRNRIP-----FPVRP--DSIDAIL 64
Query: 455 ISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLED 577
++H HLDH G +P + G+ GP+Y T T + +LL D
Sbjct: 65 LTHAHLDHTGYVPALVR-DGFNGPVYATEGTTELCTLLLPD 104
>UniRef50_Q1PVS7 Cluster: Putative uncharacterized protein; n=1;
Candidatus Kuenenia stuttgartiensis|Rep: Putative
uncharacterized protein - Candidatus Kuenenia
stuttgartiensis
Length = 468
Score = 62.5 bits (145), Expect = 1e-08
Identities = 34/103 (33%), Positives = 62/103 (60%), Gaps = 1/103 (0%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 448
I++ +GA + V S L+ +++LDCG+ G+ E + ++ + +G Q+D
Sbjct: 2 IELEFIGAAKTVTGSKHLIRTSRASVLLDCGLFQGHRKEADEKNRNFSI-DG---KQLDA 57
Query: 449 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAI-APILLE 574
+++SH H+DH GALP + + GY GPIY T T+ + +P+L++
Sbjct: 58 IVLSHAHIDHSGALPCIFKN-GYRGPIYATPATRDLCSPMLMD 99
>UniRef50_A0Q181 Cluster: Metallo-beta-lactamase family protein,
putative; n=5; Clostridium|Rep: Metallo-beta-lactamase
family protein, putative - Clostridium novyi (strain NT)
Length = 512
Score = 62.5 bits (145), Expect = 1e-08
Identities = 36/103 (34%), Positives = 56/103 (54%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 448
+K+ GA + V SC ++ K I+LDCG+ G +++ R D P P +ID
Sbjct: 1 MKLEFYGAAKCVTGSCHIMKFNDKTILLDCGLFQGKDEKVRGND---EFPFDP--KKIDY 55
Query: 449 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLED 577
VI+SH H+DH G +P + + G+ G + T TK + I+L D
Sbjct: 56 VILSHAHIDHSGRIPLLYKK-GFKGEVICTRATKQLCSIMLPD 97
>UniRef50_A0RY50 Cluster: Exonuclease of the beta-lactamase fold;
n=1; Cenarchaeum symbiosum|Rep: Exonuclease of the
beta-lactamase fold - Cenarchaeum symbiosum
Length = 417
Score = 62.5 bits (145), Expect = 1e-08
Identities = 49/152 (32%), Positives = 72/152 (47%), Gaps = 1/152 (0%)
Frame = +2
Query: 284 LGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISH 463
LGA +VGRS L+ G N++LD G+ G RR Y V P +D +II+H
Sbjct: 2 LGAAGEVGRSGFLVGCNGTNLLLDYGIMFG----RRGDPPKYPVHVKP--RDVDSIIITH 55
Query: 464 FHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGESNFFTSQMIKD 643
HLDH G +P M I Y T PT ++ +L+EDM K+ K + F +
Sbjct: 56 AHLDHSGNVPSM--YISGNVDTYATAPTLELSKLLIEDMLKI----KSNVHIFDLPEVNS 109
Query: 644 CMKKVTAVTLHQSV-MVDNELEIKAYYAGHVL 736
M+ + + V D E++ +GHV+
Sbjct: 110 MMRSSIKIGFKEKVKRGDATFELRE--SGHVI 139
>UniRef50_A7HPZ1 Cluster: Beta-lactamase domain protein; n=2;
Alphaproteobacteria|Rep: Beta-lactamase domain protein -
Parvibaculum lavamentivorans DS-1
Length = 472
Score = 62.1 bits (144), Expect = 1e-08
Identities = 46/166 (27%), Positives = 77/166 (46%), Gaps = 12/166 (7%)
Frame = +2
Query: 275 ITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVI 454
+T LG V S LLT+ G I++DCG+ G + R + P P ID ++
Sbjct: 24 LTSLGGAGTVTGSKHLLTLDGHRILIDCGLFQGLKNLRELNWAPF--PVDP--RSIDAIV 79
Query: 455 ISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDM------------RKVAVE 598
++H HLDH G LP + G+ G ++ T T +A ++L+D RK +
Sbjct: 80 LTHAHLDHSGYLPKIVRE-GFRGRVFATDTTCNVAALILKDSGYIQEKDADYANRKSYSK 138
Query: 599 RKGESNFFTSQMIKDCMKKVTAVTLHQSVMVDNELEIKAYYAGHVL 736
K + + + ++ TAV H++V + + +AGH+L
Sbjct: 139 HKPALPLYGVRDAERAVEAFTAVPYHKTVSLPGGATLTFRHAGHIL 184
>UniRef50_Q1NVJ9 Cluster: Beta-lactamase-like:RNA-metabolising
metallo-beta-lactamase; n=2; Deltaproteobacteria|Rep:
Beta-lactamase-like:RNA-metabolising
metallo-beta-lactamase - delta proteobacterium MLMS-1
Length = 469
Score = 61.7 bits (143), Expect = 2e-08
Identities = 37/107 (34%), Positives = 55/107 (51%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 448
+K+T GA V S LL + GK I+LDCG+ G E F ++DC
Sbjct: 1 MKLTFHGAAGTVTGSQHLLEVNGKRILLDCGLFQGKRKEA----FELNRQGFCNGKKLDC 56
Query: 449 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKV 589
+I+SH H+DH G +P + + G+ G IY T T+ + I+L D +
Sbjct: 57 LILSHAHIDHSGNIPCLVKS-GFDGDIYTTQATRDLCAIMLMDSANI 102
>UniRef50_Q980D0 Cluster: MRNA 3'-end processing factor, putative;
n=4; Sulfolobaceae|Rep: MRNA 3'-end processing factor,
putative - Sulfolobus solfataricus
Length = 492
Score = 61.7 bits (143), Expect = 2e-08
Identities = 44/150 (29%), Positives = 77/150 (51%)
Frame = +2
Query: 284 LGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISH 463
LG G++VGRS I + +I+LD G++ DE+ P+F P + ++ ++SH
Sbjct: 78 LGGGREVGRSAIEVGNSDGSIILDYGVNF---DEKDNPNF----PLQEMPGKVKGFVVSH 130
Query: 464 FHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGESNFFTSQMIKD 643
HLDH GALP + ++ +Y T T+ I +L+D K++ G + ++
Sbjct: 131 AHLDHIGALP-IYQIGSLNTKVYGTVATRIITETMLKDFLKLS----GAKIPYEWVEVRK 185
Query: 644 CMKKVTAVTLHQSVMVDNELEIKAYYAGHV 733
M A+ + V +D+ L++ Y AGH+
Sbjct: 186 TMDNFMAIGYGEEVEIDS-LKVSLYNAGHI 214
>UniRef50_A6Q9T8 Cluster: RNA-metabolising metallo-beta-lactamase;
n=2; Sulfurovum sp. NBC37-1|Rep: RNA-metabolising
metallo-beta-lactamase - Sulfurovum sp. (strain NBC37-1)
Length = 467
Score = 61.3 bits (142), Expect = 2e-08
Identities = 35/109 (32%), Positives = 57/109 (52%), Gaps = 1/109 (0%)
Frame = +2
Query: 275 ITPLGAGQDVGRSCILLTM-GGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCV 451
+ GA + V SC LL + G I++DCGM G + R + F + +D +
Sbjct: 4 VVSYGAAEVVTGSCHLLEIDSGTRILVDCGMFQGREEHRNYGLFDFDA------KSVDYL 57
Query: 452 IISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVE 598
+++H HLDH G +P + + G++G I T T A+A ++L D K+ E
Sbjct: 58 LVTHAHLDHVGRIPKLVKE-GFSGTIVATDATFALAEVVLLDSAKIMKE 105
>UniRef50_A3I563 Cluster: Zn-dependent hydrolase, beta-lactamase
superfamily protein; n=1; Bacillus sp. B14905|Rep:
Zn-dependent hydrolase, beta-lactamase superfamily
protein - Bacillus sp. B14905
Length = 356
Score = 61.3 bits (142), Expect = 2e-08
Identities = 36/92 (39%), Positives = 50/92 (54%)
Frame = +2
Query: 272 KITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCV 451
KI LG + GR+C + GK I+LDCG+ N ++ P + E ++ V
Sbjct: 3 KIEILGGVGEYGRNCFYIENQGKAILLDCGVMK--NSQKTPPAITLNHVE-----KLKAV 55
Query: 452 IISHFHLDHCGALPYMSEMIGYTGPIYMTHPT 547
ISH H+DH GALP + EM GY G + M+H T
Sbjct: 56 FISHSHIDHVGALPLLEEM-GYKGQVLMSHKT 86
>UniRef50_Q2G7Y1 Cluster: Beta-lactamase-like protein; n=1;
Novosphingobium aromaticivorans DSM 12444|Rep:
Beta-lactamase-like protein - Novosphingobium
aromaticivorans (strain DSM 12444)
Length = 535
Score = 60.1 bits (139), Expect = 6e-08
Identities = 33/107 (30%), Positives = 56/107 (52%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 448
+++ GA + V SC +G +++DCG+ G R ++ P +ID
Sbjct: 3 LRLNVHGAARTVTGSCFEFVLGDMRLLVDCGLFQG---SRSLEALNH-EPLDFDVHKIDG 58
Query: 449 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKV 589
VI++H H+DH G LP ++ GY GPI+ T T A+ ++L D ++
Sbjct: 59 VIVTHAHIDHSGLLPRLAAE-GYEGPIWCTPETAALLKVMLADAGRI 104
>UniRef50_Q11PK2 Cluster: Metallo-beta-lactamase superfamily
protein; n=1; Cytophaga hutchinsonii ATCC 33406|Rep:
Metallo-beta-lactamase superfamily protein - Cytophaga
hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 451
Score = 60.1 bits (139), Expect = 6e-08
Identities = 41/156 (26%), Positives = 71/156 (45%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 448
+K+T GA + V S LL G I++DCG ++D + E S+ID
Sbjct: 1 MKLTFWGAARKVTGSMYLLESLGYKILIDCGSD--FSDRHKVLTGGLFPFEA---SEIDL 55
Query: 449 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGESNFFTS 628
VI++H H+DH G +P + GY G I T PT ++ +L D + K +N S
Sbjct: 56 VILTHAHVDHSGNIPALIR-AGYRGQILSTAPTAELSELLFADSAYIQRAEKKIANSAPS 114
Query: 629 QMIKDCMKKVTAVTLHQSVMVDNELEIKAYYAGHVL 736
+ + + ++ ++ + ++ GH+L
Sbjct: 115 DYSYKPVDRFIPIAFNKDFELNERITVRLTPVGHIL 150
>UniRef50_Q8WPK6 Cluster: Similar to cleavage and polyadenylation
factor; n=1; Oikopleura dioica|Rep: Similar to cleavage
and polyadenylation factor - Oikopleura dioica
(Tunicate)
Length = 765
Score = 60.1 bits (139), Expect = 6e-08
Identities = 48/161 (29%), Positives = 75/161 (46%), Gaps = 5/161 (3%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 448
+K L D C LL + +LDCG + ++ + G QID
Sbjct: 5 VKFQSLSGFDDEAPHCHLLQIDDFKFLLDCG----WAEQHHEKIIDGLKRHG---RQIDA 57
Query: 449 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLED--MRKVAVERKGESNFF 622
++ISH L HCG LPY+S+ +G T PIYMT P + + L D + + AVE + + F
Sbjct: 58 ILISHPDLLHCGMLPYLSK-LGITCPIYMTMPACKMGQMFLYDFVLSRTAVE---DFDMF 113
Query: 623 TSQMIKDCMKKVTAVTLHQSVMV---DNELEIKAYYAGHVL 736
T + + T + +Q+ V D ++I AGH++
Sbjct: 114 TLDDVDAVFDRATQLKHNQTEAVRGQDYGIQIMPVQAGHMI 154
>UniRef50_Q5WCW7 Cluster: Beta-lactamase superfamily Zn-dependent
hydrolase; n=1; Bacillus clausii KSM-K16|Rep:
Beta-lactamase superfamily Zn-dependent hydrolase -
Bacillus clausii (strain KSM-K16)
Length = 367
Score = 59.7 bits (138), Expect = 7e-08
Identities = 45/158 (28%), Positives = 79/158 (50%), Gaps = 2/158 (1%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKN--IMLDCGMHMGYNDERRFPDFSYIVPEGPITSQI 442
+K+T LG + GR+C LL N I+LDCG+ G ++ FP + + S I
Sbjct: 2 VKVTALGGVGEYGRNCFLLKEEATNQTILLDCGVKNGKPEQ--FPAITE-----QLASTI 54
Query: 443 DCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGESNFF 622
D V +SH H DH GALP ++ G+T I+++ + A +E ++ V ++ S +
Sbjct: 55 DVVFLSHVHNDHVGALPLLAAK-GFTKEIWLSEASLA----QIEPIKSVWRKKADVSPYS 109
Query: 623 TSQMIKDCMKKVTAVTLHQSVMVDNELEIKAYYAGHVL 736
+S + K + + + + + + L Y+GH+L
Sbjct: 110 SSDVDKLRFQSFPSNSRGKWTKLSDHLSFTWGYSGHML 147
>UniRef50_Q023M0 Cluster: Beta-lactamase domain protein; n=1;
Solibacter usitatus Ellin6076|Rep: Beta-lactamase domain
protein - Solibacter usitatus (strain Ellin6076)
Length = 469
Score = 59.7 bits (138), Expect = 7e-08
Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPIT-SQID 445
+K+T GA V S L+ GGK +LDCG+ G E + + P + S ID
Sbjct: 1 MKLTFWGAAGTVTGSMHLVETGGKRYLLDCGLAQGRRKEADAKNRNL-----PFSGSSID 55
Query: 446 CVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLED 577
V++SH H+DH G LP + + G++GPIY T + + +L D
Sbjct: 56 AVVLSHAHIDHSGNLPSLVKH-GFSGPIYSTPASNDLCGWMLRD 98
>UniRef50_Q6N2A1 Cluster: Beta-lactamase-like; n=12;
Rhizobiales|Rep: Beta-lactamase-like - Rhodopseudomonas
palustris
Length = 542
Score = 59.3 bits (137), Expect = 1e-07
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Frame = +2
Query: 287 GAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSY-IVPEGPITSQIDCVIISH 463
GA + V SC L GK ++DCG+ G+ + + +Y P P S+ID V+++H
Sbjct: 9 GAARTVTGSCYLFETKGKRFLVDCGLFQGH---KTLKELNYGAFPFRP--SEIDAVLLTH 63
Query: 464 FHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLED 577
H+DHCG LP + G+ G I T T + +L D
Sbjct: 64 AHIDHCGLLPKLVRE-GFKGRILATRGTIDLCSYMLPD 100
>UniRef50_Q5QU60 Cluster: Predicted exonuclease of the
beta-lactamase fold; n=2; Alteromonadales|Rep: Predicted
exonuclease of the beta-lactamase fold - Idiomarina
loihiensis
Length = 452
Score = 59.3 bits (137), Expect = 1e-07
Identities = 34/110 (30%), Positives = 59/110 (53%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 448
+++ LG + V S L+ I++DCG+ GY RR ++ + P G +Q+D
Sbjct: 1 MRVVFLGGAETVTGSKYLVETESTRILIDCGLFQGYKWLRR-RNWQPL-PMG--INQVDG 56
Query: 449 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVE 598
V+++H HLDH G +P + + G+ GP++ H T + IL D ++ E
Sbjct: 57 VVLTHAHLDHSGFVPVLYKE-GFRGPVFAHHATSGLCDILWADSGRIQEE 105
>UniRef50_A3WMD7 Cluster: Predicted exonuclease of the
beta-lactamase fold; n=1; Idiomarina baltica OS145|Rep:
Predicted exonuclease of the beta-lactamase fold -
Idiomarina baltica OS145
Length = 460
Score = 59.3 bits (137), Expect = 1e-07
Identities = 50/157 (31%), Positives = 71/157 (45%), Gaps = 1/157 (0%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKN-IMLDCGMHMGYNDERRFPDFSYIVPEGPITSQID 445
I +T LG V SC L + + +M+DCG G E + P + S +
Sbjct: 10 IHLTHLGGTWQVTGSCHLWHLNAQQTVMIDCGAFQGITQE------DDLTPYVDVDS-LA 62
Query: 446 CVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGESNFFT 625
V I+H HLDH G LP + + GY GPIY T T A+ ++L D ++A R ES
Sbjct: 63 AVFITHAHLDHVGRLPQLLAL-GYRGPIYCTAATLALMQLVLGDSLQLAGIR-DESALTA 120
Query: 626 SQMIKDCMKKVTAVTLHQSVMVDNELEIKAYYAGHVL 736
+ + V Q+V V L + AGH+L
Sbjct: 121 FNTL--LARHVVLCEYGQTVDVLPSLSVTFEEAGHIL 155
>UniRef50_A1SFD7 Cluster: Beta-lactamase domain protein; n=2;
Bacteria|Rep: Beta-lactamase domain protein -
Nocardioides sp. (strain BAA-499 / JS614)
Length = 460
Score = 58.8 bits (136), Expect = 1e-07
Identities = 36/114 (31%), Positives = 57/114 (50%)
Frame = +2
Query: 275 ITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVI 454
+T LGA + V S L+ ++D G++ G D RR + VP S + V+
Sbjct: 6 LTFLGAAESVTGSKFLVDTHSSRTLVDAGLYQGLADLRRRNWTPFPVP----ASGLGSVV 61
Query: 455 ISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGESN 616
++H HLDHCG LP + + G+ GPI + T + I+L D + E ++N
Sbjct: 62 VTHAHLDHCGFLPRLVKE-GFDGPILCSPDTAELVEIVLRDSAHLQEEDARQAN 114
>UniRef50_Q1IJR0 Cluster: Beta-lactamase-like; n=1; Acidobacteria
bacterium Ellin345|Rep: Beta-lactamase-like -
Acidobacteria bacterium (strain Ellin345)
Length = 476
Score = 58.4 bits (135), Expect = 2e-07
Identities = 44/148 (29%), Positives = 69/148 (46%), Gaps = 14/148 (9%)
Frame = +2
Query: 335 GKNIMLDCGMHMGYND--ERRFPDFSYIVPEGPITSQIDCVIISHFHLDHCGALPYMSEM 508
G +++DCG+ G + ER + D +P +ID V+++H HLDH G +P + +
Sbjct: 31 GFQLLIDCGLFQGQKEWRERNWRDTP--IP----AREIDAVVLTHAHLDHTGWIPRLVKE 84
Query: 509 IGYTGPIYMTHPTKAIAPILLEDM-----RKVAVERKGESN-------FFTSQMIKDCMK 652
G+TGPIY T T + ++L D A K +S+ +T Q D +K
Sbjct: 85 -GFTGPIYATSATVDLCGVILPDSGHLQEEDAAFHNKIKSSKHDPALPLYTMQEALDSLK 143
Query: 653 KVTAVTLHQSVMVDNELEIKAYYAGHVL 736
AV + V EL + A H+L
Sbjct: 144 LFKAVDFEKQTDVSPELSFRYVRAAHIL 171
>UniRef50_O87142 Cluster: WbfZ protein; n=32; Vibrionaceae|Rep: WbfZ
protein - Vibrio cholerae
Length = 446
Score = 58.4 bits (135), Expect = 2e-07
Identities = 31/108 (28%), Positives = 56/108 (51%)
Frame = +2
Query: 266 DIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQID 445
++++ G V SC L G+ +++DCG+ G ++ +F+ +D
Sbjct: 8 NMEVVHHGGKASVTGSCHELRADGQALLIDCGLFQGADERPLAVEFAL--------GHVD 59
Query: 446 CVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKV 589
+I++H H+DH G LP++ G+ PIY T T + P++LED K+
Sbjct: 60 ALILTHAHIDHIGRLPWLL-AAGFKQPIYCTAATAELVPLMLEDGLKL 106
>UniRef50_Q9V3D6 Cluster: Probable cleavage and polyadenylation
specificity factor subunit 2; n=7; Coelomata|Rep:
Probable cleavage and polyadenylation specificity factor
subunit 2 - Drosophila melanogaster (Fruit fly)
Length = 756
Score = 58.4 bits (135), Expect = 2e-07
Identities = 40/159 (25%), Positives = 75/159 (47%), Gaps = 3/159 (1%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 448
IK+ + D C +L + I+LDCG + +F D ++I +D
Sbjct: 5 IKLHTISGAMDESPPCYILQIDDVRILLDCGW------DEKF-DANFIKELKRQVHTLDA 57
Query: 449 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGESNFFTS 628
V++SH H GALPY+ +G PIY T P + + + D+ ++ G+ + F+
Sbjct: 58 VLLSHPDAYHLGALPYLVGKLGLNCPIYATIPVFKMGQMFMYDL-YMSHFNMGDFDLFSL 116
Query: 629 QMIKDCMKKVTAVTLHQSVMVDNE---LEIKAYYAGHVL 736
+ +K+T + +Q+V + ++ + I AGH++
Sbjct: 117 DDVDTAFEKITQLKYNQTVSLKDKGYGISITPLNAGHMI 155
>UniRef50_Q74C32 Cluster: Metallo-beta-lactamase family protein;
n=2; Desulfuromonadales|Rep: Metallo-beta-lactamase
family protein - Geobacter sulfurreducens
Length = 475
Score = 57.6 bits (133), Expect = 3e-07
Identities = 36/132 (27%), Positives = 66/132 (50%), Gaps = 1/132 (0%)
Frame = +2
Query: 344 IMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISHFHLDHCGALPYMSEMIGYTG 523
I++DCG+ G ND F +I + P+ ++ ++++H H+DHCG +P++ G+ G
Sbjct: 27 ILIDCGLLQG-NDGAGGKRFPFI--DFPL-DRVKGLVLTHVHIDHCGRIPHLLG-AGFQG 81
Query: 524 PIYMTHPTKAIAPILLEDMRKVAVERKGESNFFTSQMIKDCMKKVTAVTLHQSVMVD-NE 700
PI+ + + + P++LED KV + R +K + + HQ D
Sbjct: 82 PIWCSEASALLLPLVLEDAVKVGITRDEHLIARFLNAVKKRLVPLPYDRWHQLGSWDGRS 141
Query: 701 LEIKAYYAGHVL 736
++ AGH+L
Sbjct: 142 ASLRLQQAGHIL 153
>UniRef50_Q12E81 Cluster: Beta-lactamase-like; n=14;
Proteobacteria|Rep: Beta-lactamase-like - Polaromonas
sp. (strain JS666 / ATCC BAA-500)
Length = 453
Score = 57.2 bits (132), Expect = 4e-07
Identities = 36/111 (32%), Positives = 57/111 (51%)
Frame = +2
Query: 284 LGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISH 463
LGA V S L+ +++DCG+ GY + R ++S + P P + ID V+++H
Sbjct: 6 LGATDTVTGSKYLVQHDKARVLVDCGLFQGYK-QLRLRNWSPL-PVKP--AAIDAVVLTH 61
Query: 464 FHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGESN 616
H+DH G LP ++ G+ G +Y T T + ILL D + E +N
Sbjct: 62 AHIDHSGYLPLLARQ-GFRGKVYCTPATADLCRILLPDSGHLQEEEAEYAN 111
>UniRef50_Q9AA00 Cluster: Metallo-beta-lactamase family protein;
n=2; Caulobacter|Rep: Metallo-beta-lactamase family
protein - Caulobacter crescentus (Caulobacter
vibrioides)
Length = 530
Score = 56.8 bits (131), Expect = 5e-07
Identities = 33/103 (32%), Positives = 51/103 (49%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 448
I +T GA V C L +++DCGM G + +Y P Q+D
Sbjct: 3 ISLTFHGAAGCVTGFCARLVTPRTTVLIDCGMFQG---SKTLKALNY-QPFPFDAGQVDA 58
Query: 449 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLED 577
V+++H H+DH G LP + + G+ GPIY T T+ + ++L D
Sbjct: 59 VLLTHAHIDHSGLLPKLM-LAGFEGPIYATAATRDLGAVMLVD 100
>UniRef50_Q8DE34 Cluster: Predicted exonuclease of the
beta-lactamase fold involved in RNA processing; n=6;
Vibrionales|Rep: Predicted exonuclease of the
beta-lactamase fold involved in RNA processing - Vibrio
vulnificus
Length = 446
Score = 56.8 bits (131), Expect = 5e-07
Identities = 30/97 (30%), Positives = 50/97 (51%)
Frame = +2
Query: 287 GAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISHF 466
G V SC G +++DCG+ G + R P+ + V ID ++++H
Sbjct: 7 GGKDTVTGSCHEFRAAGIALLIDCGLFQG--KDARPPEVDFPV------KHIDALVLTHA 58
Query: 467 HLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLED 577
H+DH G +P++ G++G IY T T + P++LED
Sbjct: 59 HIDHIGRIPWLL-AAGFSGSIYCTEATAELVPLMLED 94
>UniRef50_Q0EST3 Cluster: Beta-lactamase-like; n=2;
Thermoanaerobacter ethanolicus|Rep: Beta-lactamase-like
- Thermoanaerobacter ethanolicus X514
Length = 616
Score = 56.8 bits (131), Expect = 5e-07
Identities = 45/149 (30%), Positives = 75/149 (50%), Gaps = 1/149 (0%)
Frame = +2
Query: 293 GQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISHFHL 472
G ++G S L++ G NI+LD G + D+ + + +P ID VII+H HL
Sbjct: 210 GDNIGASSYLVSYEGINILLDAGALI--KDKTLYYNSIKNLPID--IKDIDLVIITHVHL 265
Query: 473 DHCGALPYMSEMIGYTGPIYMTHPTKAI-APILLEDMRKVAVERKGESNFFTSQMIKDCM 649
DH G + + G PI ++ PTK I I L K+ V+ + E F SQ+I
Sbjct: 266 DHSGGIVELLRK-GLNSPIIISRPTKEILKQIFLRGHTKLEVKIEEEIINFDSQIISFDT 324
Query: 650 KKVTAVTLHQSVMVDNELEIKAYYAGHVL 736
++ ++ + + E+++K + AGH+L
Sbjct: 325 EEESSFRIK-----NKEVKLKLFPAGHIL 348
>UniRef50_A0LI39 Cluster: Beta-lactamase domain protein; n=1;
Syntrophobacter fumaroxidans MPOB|Rep: Beta-lactamase
domain protein - Syntrophobacter fumaroxidans (strain
DSM 10017 / MPOB)
Length = 535
Score = 56.8 bits (131), Expect = 5e-07
Identities = 47/167 (28%), Positives = 79/167 (47%), Gaps = 13/167 (7%)
Frame = +2
Query: 275 ITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVI 454
IT LGA V S LL G K ++DCG+ G + P P + + +
Sbjct: 3 ITCLGASGCVTGSSFLLDNGSK-YLIDCGLFQGGKQMEALNRKPW--PFNP--ADVSALF 57
Query: 455 ISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLED---MRKVAVE-------RK 604
++H H+DHCG +P + + G+ G IY T PT + ILL D ++++ E R
Sbjct: 58 LTHAHIDHCGRIPKLVK-DGFRGRIYTTLPTAELCKILLLDSAHIQEMEAEWQTRKGRRV 116
Query: 605 GESN---FFTSQMIKDCMKKVTAVTLHQSVMVDNELEIKAYYAGHVL 736
GE + +T + C + V ++ + V+++L++ A H+L
Sbjct: 117 GEQDVEPLYTVEDATACFPLFSVVDQNEPITVNDDLKVCYRNAAHIL 163
>UniRef50_A5BWD3 Cluster: Putative uncharacterized protein; n=3;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 986
Score = 56.0 bits (129), Expect = 9e-07
Identities = 30/76 (39%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = +2
Query: 287 GAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISHF 466
G G ++GRSC+ + GK I+ DCG+ GY P F I P S ID +++ F
Sbjct: 527 GIGNEMGRSCVYTSYKGKTILFDCGVLPGYTGTVALPYFDEIDP-----STIDVLLVIPF 581
Query: 467 HLDHCGALP-YMSEMI 511
LDH +LP Y+ E I
Sbjct: 582 QLDHAASLPSYLGEDI 597
>UniRef50_A1ID10 Cluster: Metallo-beta-lactamase family protein;
n=2; Desulfobacterales|Rep: Metallo-beta-lactamase
family protein - Candidatus Desulfococcus oleovorans
Hxd3
Length = 525
Score = 55.2 bits (127), Expect = 2e-06
Identities = 37/129 (28%), Positives = 66/129 (51%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 448
+K+T GA Q+V S L I+LDCG+ G DE + + +P P T I
Sbjct: 1 MKLTCYGATQEVTGSMHRLCSEHDCILLDCGLFQGRRDET--AEKNRKMPIDPAT--ITN 56
Query: 449 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGESNFFTS 628
+I+SH H+DH G LP + + G+ G I T T+ + +L D + ++ ++++
Sbjct: 57 IILSHAHIDHSGRLPLVVK-DGFAGRIVSTRATRDVCEYMLPDAAHI---QESDADYLNY 112
Query: 629 QMIKDCMKK 655
+ +++ + K
Sbjct: 113 KAVRNALYK 121
>UniRef50_A4RR19 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 715
Score = 55.2 bits (127), Expect = 2e-06
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 3/144 (2%)
Frame = +2
Query: 314 CILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISHFHLDHCGALP 493
C +++ G NI+LDCG +ND +F D + P I ++D V+ISH H GALP
Sbjct: 2 CYHVSIDGCNILLDCG----WND--KF-DVDMLKPLAAIAPKVDAVLISHPDTAHLGALP 54
Query: 494 YMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGESNFFTSQMIKDCMKKVTAVTL 673
Y +G +Y T P + + + D ++ F+ + V
Sbjct: 55 YAFGKLGMNCKVYATLPVHKMGQMYMYDHFLTRQDQGDFQEVFSLDDVDTAFAAFVPVKY 114
Query: 674 HQSVMVDNE---LEIKAYYAGHVL 736
Q M+ + + + AY AGH L
Sbjct: 115 MQLSMLRGKGDGISVMAYAAGHTL 138
>UniRef50_A2BK26 Cluster: Putative exoribonuclease; n=1;
Hyperthermus butylicus DSM 5456|Rep: Putative
exoribonuclease - Hyperthermus butylicus (strain DSM
5456 / JCM 9403)
Length = 427
Score = 55.2 bits (127), Expect = 2e-06
Identities = 47/161 (29%), Positives = 74/161 (45%), Gaps = 3/161 (1%)
Frame = +2
Query: 260 MPDIKITPLGAGQDVGRSCILLTMGGKN---IMLDCGMHMGYNDERRFPDFSYIVPEGPI 430
M I + LG G +VGR +L+ + + I+LD G++ DE P F+ P
Sbjct: 1 MAKIALRILGGGGEVGRLSVLVRVRPEERDGILLDAGVNF---DEEDRPVFAATYPP--- 54
Query: 431 TSQIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGE 610
+ +I+SH HLDH G P I +Y T PT +A ++LED K+ G
Sbjct: 55 -KYVKAMILSHAHLDHIGTAPMY--FISGRPRVYATKPTLEMAKLMLEDFLKL----NGY 107
Query: 611 SNFFTSQMIKDCMKKVTAVTLHQSVMVDNELEIKAYYAGHV 733
+ + +K ++ + Q + +D +E Y AGHV
Sbjct: 108 YSPYEHYEVKLLLEAGEKIHYGQRIDIDG-VEATFYSAGHV 147
>UniRef50_A0JUX7 Cluster: Beta-lactamase domain protein; n=25;
Bacteria|Rep: Beta-lactamase domain protein -
Arthrobacter sp. (strain FB24)
Length = 563
Score = 54.4 bits (125), Expect = 3e-06
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Frame = +2
Query: 251 KLIMPDIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERR----FPDFSYIVP 418
KL+ ++I PLG ++GR+ + + GK +++DCG+ + PDFSYI
Sbjct: 14 KLLKDTLRIVPLGGLGEIGRNMTVFEIDGKLLIVDCGVLFPEETQPGVDLILPDFSYIEK 73
Query: 419 EGPITSQIDCVIISHFHLDHCGALPYM 499
I V+++H H DH GA+PY+
Sbjct: 74 R---LDDIVAVVLTHGHEDHIGAVPYL 97
>UniRef50_Q1B028 Cluster: Beta-lactamase-like protein; n=1;
Rubrobacter xylanophilus DSM 9941|Rep:
Beta-lactamase-like protein - Rubrobacter xylanophilus
(strain DSM 9941 / NBRC 16129)
Length = 813
Score = 54.0 bits (124), Expect = 4e-06
Identities = 36/105 (34%), Positives = 49/105 (46%)
Frame = +2
Query: 263 PDIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQI 442
P + LG +VG S LL G +++D G+ + PDF I P +
Sbjct: 390 PTLAFRALGGAGEVGGSSHLLDFGSTRVLVDAGIKPDGRGQLA-PDFEEIGP-------L 441
Query: 443 DCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLED 577
D II+H HLDHCGALP + + PIY T P+ + L D
Sbjct: 442 DGAIITHAHLDHCGALPLLVKNHPQL-PIYCTPPSAKLIVSALND 485
>UniRef50_Q07ZA5 Cluster: Beta-lactamase domain protein; n=3;
Alteromonadales|Rep: Beta-lactamase domain protein -
Shewanella frigidimarina (strain NCIMB 400)
Length = 521
Score = 54.0 bits (124), Expect = 4e-06
Identities = 33/93 (35%), Positives = 48/93 (51%), Gaps = 4/93 (4%)
Frame = +2
Query: 335 GKNI---MLDCGMHMGYNDE-RRFPDFSYIVPEGPITSQIDCVIISHFHLDHCGALPYMS 502
G NI ++DCG+ G + D I + I +II+H H+DH G +PY+
Sbjct: 34 GNNISSYLIDCGLFQGAETAGKSSADQLQITFD---IQHIKALIITHCHIDHVGRIPYLL 90
Query: 503 EMIGYTGPIYMTHPTKAIAPILLEDMRKVAVER 601
G+ PIY T T A+ P+++ED KV V R
Sbjct: 91 AA-GFNQPIYATTATAALLPLVIEDALKVGVTR 122
>UniRef50_Q01GI5 Cluster: Polyadenylation cleavage/specificity
factor 100 kDa subunit; n=1; Ostreococcus tauri|Rep:
Polyadenylation cleavage/specificity factor 100 kDa
subunit - Ostreococcus tauri
Length = 807
Score = 54.0 bits (124), Expect = 4e-06
Identities = 40/153 (26%), Positives = 63/153 (41%), Gaps = 3/153 (1%)
Frame = +2
Query: 287 GAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISHF 466
GAG+ C +++ G NI+LDCG + D + P I +D V+ISH
Sbjct: 40 GAGERA--MCYHVSIDGCNILLDCGWTDAF-------DVEMLKPLEAIAKDVDAVLISHP 90
Query: 467 HLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGESNFFTSQMIKDC 646
H GALPY +G +Y T P + + + D +++ F+ +
Sbjct: 91 DTAHLGALPYAFGKLGMNCKVYATLPVHKMGQMYMYDHFLTRQDQEDFQETFSLDDVDKA 150
Query: 647 MKKVTAVTLHQSVMVDNE---LEIKAYYAGHVL 736
V Q M+ + + + AY AGH L
Sbjct: 151 FAAFVPVKYQQLSMLRGKGEGISVMAYAAGHTL 183
>UniRef50_Q0W8H2 Cluster: MRNA 3-end processing factor; n=5;
Euryarchaeota|Rep: MRNA 3-end processing factor -
Uncultured methanogenic archaeon RC-I
Length = 432
Score = 54.0 bits (124), Expect = 4e-06
Identities = 44/155 (28%), Positives = 77/155 (49%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 448
I+I+ GAG++VGRS L+ I+LD G+ +D P++ P+G + ++
Sbjct: 21 IQISIHGAGREVGRSAFLID---DKILLDYGIKP--SDP---PEY----PQGDVRPEV-- 66
Query: 449 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGESNFFTS 628
V++SH HLDHCG +P + ++ + T PTK + +L ED ++A F +
Sbjct: 67 VVVSHGHLDHCGVVPNLMDL---EPKVIATPPTKQLTRLLAEDTMEIAESSHALVPFDPA 123
Query: 629 QMIKDCMKKVTAVTLHQSVMVDNELEIKAYYAGHV 733
M + ++ + + DN I + AGH+
Sbjct: 124 DM-RQLLRLTREMEYLDAYEHDNH-TITLFDAGHI 156
>UniRef50_Q8RAH0 Cluster: Predicted hydrolase of the
metallo-beta-lactamase superfamily; n=9; Bacteria|Rep:
Predicted hydrolase of the metallo-beta-lactamase
superfamily - Thermoanaerobacter tengcongensis
Length = 554
Score = 53.6 bits (123), Expect = 5e-06
Identities = 29/107 (27%), Positives = 56/107 (52%), Gaps = 4/107 (3%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYND----ERRFPDFSYIVPEGPITS 436
+KI PLG ++G++ + G I++DCG+ ++ + PD +Y++
Sbjct: 7 LKIIPLGGLNEIGKNMTVFEYGNDIIVVDCGLAFPDDEMLGIDLVIPDITYLLKN---RE 63
Query: 437 QIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLED 577
++ ++++H H DH GALPY+ + + PIY T T + L++
Sbjct: 64 KVKAIVLTHGHEDHIGALPYVLKQLNV--PIYGTRLTIGLVEYKLKE 108
>UniRef50_A4XTF4 Cluster: Beta-lactamase domain protein; n=12;
Gammaproteobacteria|Rep: Beta-lactamase domain protein -
Pseudomonas mendocina ymp
Length = 488
Score = 53.6 bits (123), Expect = 5e-06
Identities = 40/155 (25%), Positives = 72/155 (46%), Gaps = 5/155 (3%)
Frame = +2
Query: 287 GAGQDVGRSCILLTMGGKN-IMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISH 463
GA V SC L M ++ +++DCG+ G S + + I ++ +H
Sbjct: 10 GAVTGVTGSCHQLQMDERHGLLVDCGLFQGAETSPEGRAGSERLAIDFSLAGIKALVATH 69
Query: 464 FHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGESNFFTSQMIKD 643
H+DH G +PY+ G+ GPI + P+ + PI+L+D K+ R + + +K
Sbjct: 70 VHIDHVGRIPYLL-AAGFKGPILCSEPSAKLLPIVLKDAFKLGFSRDQKQ---VERYLKL 125
Query: 644 CMKKVTAVTLHQSV-MVDN---ELEIKAYYAGHVL 736
+++ A+ Q ++D I+ AGH+L
Sbjct: 126 IEQRIVALPYKQWFNLIDTPQLSARIRLQRAGHIL 160
>UniRef50_A3DMW0 Cluster: Beta-lactamase domain protein; n=1;
Staphylothermus marinus F1|Rep: Beta-lactamase domain
protein - Staphylothermus marinus (strain ATCC 43588 /
DSM 3639 / F1)
Length = 427
Score = 53.6 bits (123), Expect = 5e-06
Identities = 33/107 (30%), Positives = 54/107 (50%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 448
+ + LG G +VGR+ L+ K +LD G++ D +FP + PI ++
Sbjct: 2 VHVEILGGGNEVGRAAYLVVDNNKKFLLDYGVNFDEEDHPQFP-----LHVRPI--ELSG 54
Query: 449 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKV 589
+ I+H HLDH GA P + I +++T PT I +L+ D K+
Sbjct: 55 LAITHAHLDHIGAAPLL--YITGKPRVFVTKPTLEIGKLLISDFLKL 99
>UniRef50_A6PE29 Cluster: Beta-lactamase domain protein; n=1;
Shewanella sediminis HAW-EB3|Rep: Beta-lactamase domain
protein - Shewanella sediminis HAW-EB3
Length = 526
Score = 53.2 bits (122), Expect = 6e-06
Identities = 33/114 (28%), Positives = 57/114 (50%), Gaps = 3/114 (2%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKN-IMLDCGMHMGYND--ERRFPDFSYIVPEGPITSQ 439
++I GA V SC L + K+ +++DCG+ G G IT+
Sbjct: 7 VEIIHHGAVNGVTGSCHQLVINEKSSLLIDCGLFQGAETAGSSNAEQLKIAFDIGSITA- 65
Query: 440 IDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVER 601
++++H H+DH G +PY+ G+ PI+ T T A+ P+++ED +V V +
Sbjct: 66 ---LLVTHCHIDHVGRIPYLL-AAGFDQPIFATTATAALLPMVIEDAIRVGVTK 115
>UniRef50_Q2AEK6 Cluster: Beta-lactamase-like:RNA-metabolising
metallo-beta-lactamase; n=1; Halothermothrix orenii H
168|Rep: Beta-lactamase-like:RNA-metabolising
metallo-beta-lactamase - Halothermothrix orenii H 168
Length = 556
Score = 52.8 bits (121), Expect = 8e-06
Identities = 37/111 (33%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Frame = +2
Query: 260 MPD-IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRF----PDFSYIVPEG 424
MP I I PLG +++G + I++ I+LD G+ +D+ + PD SY+V
Sbjct: 1 MPQKISIIPLGGCREIGNNMIVIESKKDIIILDSGVLFPEDDDFGYELIIPDISYLVER- 59
Query: 425 PITSQIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLED 577
+I +I SH H DH GA+P++ E I P++ T T + LED
Sbjct: 60 --KKKIRGIIFSHGHEDHIGAVPFLLERI--NPPLFGTDLTMGLIKSKLED 106
>UniRef50_Q2GCU7 Cluster: Metallo-beta-lactamase family, beta-CASP
subfamily; n=1; Neorickettsia sennetsu str.
Miyayama|Rep: Metallo-beta-lactamase family, beta-CASP
subfamily - Neorickettsia sennetsu (strain Miyayama)
Length = 542
Score = 52.0 bits (119), Expect = 1e-05
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Frame = +2
Query: 281 PLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQ----IDC 448
PLG ++G + L G+ IM+DCG G+ D P +V + + +
Sbjct: 10 PLGGTGEIGMNVTLYGYKGRWIMIDCGA--GFADAE-LPGIDIVVADISFIEERKDDLLA 66
Query: 449 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPT 547
+II+H H DHCGALPY+ + + P+Y T T
Sbjct: 67 IIITHIHEDHCGALPYLWDRLAV--PVYTTQFT 97
>UniRef50_Q2S180 Cluster: Ysh1p: subunit of polyadenylation factor
I, putative; n=1; Salinibacter ruber DSM 13855|Rep:
Ysh1p: subunit of polyadenylation factor I, putative -
Salinibacter ruber (strain DSM 13855)
Length = 464
Score = 51.6 bits (118), Expect = 2e-05
Identities = 31/112 (27%), Positives = 50/112 (44%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 448
+K LG +G SC L + G I LD G + P F ++ S +D
Sbjct: 1 MKFLALGDTDGIGASCHFLDLNGSGIALDAGTDPQRDGPDSLPRFDWVGDRA--DSYVDH 58
Query: 449 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERK 604
+++H H DH G+LP + + +MT TK + ILL ++ +R+
Sbjct: 59 TLVTHAHHDHMGSLPVLVRRFPH-AMAHMTDATKKLLDILLPASARLQEKRR 109
>UniRef50_P56185 Cluster: UPF0036 protein HP_1430; n=26;
Epsilonproteobacteria|Rep: UPF0036 protein HP_1430 -
Helicobacter pylori (Campylobacter pylori)
Length = 689
Score = 51.2 bits (117), Expect = 3e-05
Identities = 31/94 (32%), Positives = 51/94 (54%), Gaps = 4/94 (4%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMG----YNDERRFPDFSYIVPEGPITS 436
+KITPLG ++G + +++ I++D GM + + PDFSY+ I
Sbjct: 141 VKITPLGGLGEIGGNMMVIETPKSAIVIDAGMSFPKEGLFGVDILIPDFSYL---HQIKD 197
Query: 437 QIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMT 538
+I +II+H H DH GA PY+ + + + P+Y T
Sbjct: 198 KIAGIIITHAHEDHIGATPYLFKELQF--PLYGT 229
>UniRef50_A7H6H0 Cluster: Beta-lactamase domain protein; n=2;
Anaeromyxobacter|Rep: Beta-lactamase domain protein -
Anaeromyxobacter sp. Fw109-5
Length = 550
Score = 50.8 bits (116), Expect = 3e-05
Identities = 29/108 (26%), Positives = 54/108 (50%), Gaps = 3/108 (2%)
Frame = +2
Query: 263 PDIKITPLGAGQDVGRSCILLTMGGKNIMLDCGM---HMGYNDERRFPDFSYIVPEGPIT 433
P ++I PLG ++G +C+ + G+ ++DCG+ + + PD ++
Sbjct: 3 PPVRIVPLGGLGEIGMNCMAIEADGRMAVVDCGILFPNEPIGVDVIAPDLGWLRER---R 59
Query: 434 SQIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLED 577
Q+ + ++H H DH GALP++ + P+Y T T A+ LE+
Sbjct: 60 EQVGAIYLTHGHEDHIGALPFLLREV--KAPVYGTRFTLALLRPRLEE 105
>UniRef50_Q9FMW0 Cluster: Genomic DNA, chromosome 5, P1 clone:MLE2;
n=8; Magnoliophyta|Rep: Genomic DNA, chromosome 5, P1
clone:MLE2 - Arabidopsis thaliana (Mouse-ear cress)
Length = 528
Score = 50.8 bits (116), Expect = 3e-05
Identities = 30/94 (31%), Positives = 52/94 (55%), Gaps = 4/94 (4%)
Frame = +2
Query: 263 PDIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPE-GPITS- 436
P ++I P+G ++G +C+L+ + I++D G+ DE P I+P+ G I
Sbjct: 108 PPLRILPIGGLGEIGMNCMLVGNYDRYILIDAGIMFPDYDE---PGIQKIMPDTGFIRRW 164
Query: 437 --QIDCVIISHFHLDHCGALPYMSEMIGYTGPIY 532
+I+ V+I+H H DH GALP++ + PI+
Sbjct: 165 KHKIEAVVITHGHEDHIGALPWVIPALDPNTPIF 198
>UniRef50_A6Q3H4 Cluster: RNA-metabolising metallo-beta-lactamase;
n=8; Proteobacteria|Rep: RNA-metabolising
metallo-beta-lactamase - Nitratiruptor sp. (strain
SB155-2)
Length = 462
Score = 50.4 bits (115), Expect = 4e-05
Identities = 42/167 (25%), Positives = 77/167 (46%), Gaps = 17/167 (10%)
Frame = +2
Query: 287 GAGQDVGRSCILLTMG-GKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISH 463
GA + V SC + G ++DCGM G ++ + + P G +ID ++++H
Sbjct: 8 GAAEVVTGSCHFVKFDDGTKALIDCGMFQGLDEWKNYE------PLGFNAKEIDYLLVTH 61
Query: 464 FHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVE----------RKGES 613
HLDH G +P + + G+ G I T T + I+L D + E R+GE
Sbjct: 62 GHLDHVGRIPLLYKE-GFRGKIIATAATFELMKIVLLDTAHLMQEDFETAFRKAQRRGEE 120
Query: 614 N-----FFTSQMIKDCMKKVTAVTLH-QSVMVDNELEIKAYYAGHVL 736
+ +T + +K +K V + Q++ + + ++ AGH++
Sbjct: 121 DLVKKPLYTKRDVKAALKLPRRVVKYGQNIKLSPNIAVRYKDAGHII 167
>UniRef50_A5URN4 Cluster: Beta-lactamase domain protein; n=5;
Chloroflexi (class)|Rep: Beta-lactamase domain protein -
Roseiflexus sp. RS-1
Length = 561
Score = 50.4 bits (115), Expect = 4e-05
Identities = 31/109 (28%), Positives = 56/109 (51%), Gaps = 4/109 (3%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYND----ERRFPDFSYIVPEGPITS 436
++ PLG +VGR+ +L + ++LDCG+ D + PD +Y+ +
Sbjct: 6 LRAIPLGGAGEVGRNMWVLEQNDEILVLDCGVMFPEADMLGVDLVLPDITYLRDQ---KD 62
Query: 437 QIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMR 583
+I ++++H H DH GA+PY+ + + PIY T T + L++ R
Sbjct: 63 KIKAIVLTHGHEDHIGAVPYLVPELDFP-PIYGTPLTLGMLAGKLKEHR 110
>UniRef50_Q6L0H4 Cluster: MRNA 3'-end processing factor; n=4;
Thermoplasmatales|Rep: MRNA 3'-end processing factor -
Picrophilus torridus
Length = 405
Score = 50.4 bits (115), Expect = 4e-05
Identities = 38/151 (25%), Positives = 70/151 (46%), Gaps = 1/151 (0%)
Frame = +2
Query: 284 LGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISH 463
+G ++VGR I + IM+D G+ E Y +P P+ + I+H
Sbjct: 1 MGGAEEVGRLAIKIEDKNDKIMIDYGVEPDKPPE-------YPLPPEPVND----IFITH 49
Query: 464 FHLDHCGALPYMSEMIGYTGPIYMTHPT-KAIAPILLEDMRKVAVERKGESNFFTSQMIK 640
HLDH GALP Y+ ++ T T ++ PI+ + ++ + +E E F ++
Sbjct: 50 AHLDHTGALPVYYH--NYSAKLHATAMTANSVVPIINDSLKIMRLENYVER--FNEDDVE 105
Query: 641 DCMKKVTAVTLHQSVMVDNELEIKAYYAGHV 733
+ + + + + ++N L +AY AGH+
Sbjct: 106 NLFRSLVTERYNTDIELNN-LTARAYSAGHI 135
>UniRef50_A7PHF3 Cluster: Chromosome chr17 scaffold_16, whole genome
shotgun sequence; n=4; Viridiplantae|Rep: Chromosome
chr17 scaffold_16, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 880
Score = 50.0 bits (114), Expect = 6e-05
Identities = 27/94 (28%), Positives = 54/94 (57%), Gaps = 4/94 (4%)
Frame = +2
Query: 263 PDIKITPLGAGQDVGRSCILLTMGGKNIMLDCG-MHMGYND---ERRFPDFSYIVPEGPI 430
P +++ P+G ++G +C+L+ + I++D G M Y++ ++ PD ++I
Sbjct: 76 PPLRVLPIGGLGEIGMNCMLVGNYDRYILIDAGVMFPDYDELGVQKIIPDTTFIKKW--- 132
Query: 431 TSQIDCVIISHFHLDHCGALPYMSEMIGYTGPIY 532
+ +I+ V+I+H H DH GALP++ + PI+
Sbjct: 133 SHKIEAVVITHGHEDHIGALPWVIPALDSHTPIF 166
>UniRef50_Q0C1C8 Cluster: Metallo-beta-lactamase family protein;
n=3; Alphaproteobacteria|Rep: Metallo-beta-lactamase
family protein - Hyphomonas neptunium (strain ATCC
15444)
Length = 565
Score = 49.2 bits (112), Expect = 1e-04
Identities = 46/161 (28%), Positives = 70/161 (43%), Gaps = 4/161 (2%)
Frame = +2
Query: 266 DIKITPLGAGQDVGRSCILLTMGGKN----IMLDCGMHMGYNDERRFPDFSYIVPEGPIT 433
++ PLG ++G + G N I++D G+ G +D D P+ I
Sbjct: 14 ELVFLPLGGCGEIGMNLNAYGYGPPNARRWIIVDVGVTFGNSDTPGI-DLICADPDYLIG 72
Query: 434 SQIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGES 613
ID V ++H H DH GA+ + M+ PIY T T ++ M + V++K
Sbjct: 73 EHIDAVFLTHAHEDHIGAVGLLYPMLKTKAPIYATPFT---CELVRSKMDERGVDQKWLK 129
Query: 614 NFFTSQMIKDCMKKVTAVTLHQSVMVDNELEIKAYYAGHVL 736
+K +VT VTL S+ N L I+ AG VL
Sbjct: 130 TISMGGTVKAGPFEVTYVTLTHSIPEPNALAIRT-PAGIVL 169
>UniRef50_A1ZG78 Cluster: Exonuclease of the beta-lactamase fold
involved in RNA processing; n=1; Microscilla marina ATCC
23134|Rep: Exonuclease of the beta-lactamase fold
involved in RNA processing - Microscilla marina ATCC
23134
Length = 476
Score = 48.8 bits (111), Expect = 1e-04
Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 5/108 (4%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGK-NIMLDCGMHMGYNDERRFPD----FSYIVPEGPIT 433
+++T GA + V S LL + +++DCG H + + D + I P P
Sbjct: 1 MRLTFWGAARQVTGSMHLLELDNDFKVLIDCG-HDLERERKPLTDENGLYQGIFPFEP-- 57
Query: 434 SQIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLED 577
SQI+ V+++H H+DH G LP + G+ G IY T T + +LL D
Sbjct: 58 SQINAVVLTHAHIDHSGFLPNLVRE-GFEGVIYCTDATYDLTNLLLHD 104
>UniRef50_Q4S732 Cluster: Chromosome 14 SCAF14723, whole genome
shotgun sequence; n=5; Euteleostomi|Rep: Chromosome 14
SCAF14723, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 765
Score = 48.4 bits (110), Expect = 2e-04
Identities = 38/151 (25%), Positives = 61/151 (40%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 448
IK+T + Q+ C LL + +LDCG DE D + Q+D
Sbjct: 5 IKLTAVSGVQEESALCYLLQVDEFRFLLDCGW-----DENFSMDIIDAMKR--YVHQVDA 57
Query: 449 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGESNFFTS 628
V++SH H GALPY +G IY T P + + + D+ + + + FT
Sbjct: 58 VLLSHPDPIHLGALPYAVGKLGLNCTIYATIPVYKMGQMFMYDLYQ-SRNNSEDFTLFTL 116
Query: 629 QMIKDCMKKVTAVTLHQSVMVDNELEIKAYY 721
+ K+ + Q V + +L K +
Sbjct: 117 DDVDSAFDKIQQLKYSQIVSLKGKLASKRLF 147
>UniRef50_Q605H9 Cluster: Metallo-beta-lactamase family protein;
n=1; Methylococcus capsulatus|Rep:
Metallo-beta-lactamase family protein - Methylococcus
capsulatus
Length = 461
Score = 48.4 bits (110), Expect = 2e-04
Identities = 30/97 (30%), Positives = 52/97 (53%), Gaps = 4/97 (4%)
Frame = +2
Query: 281 PLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITS----QIDC 448
PLG ++G + L G I +D G+ G +D FPD + ++P+ + ++
Sbjct: 12 PLGGTGEIGMNLTLYGHDGAWIAVDMGITFGGDD---FPDHAVMMPDPAFIAARRERLAG 68
Query: 449 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIA 559
++++H H DH GALPY+ + + P+Y T T A+A
Sbjct: 69 IVLTHGHEDHVGALPYLWKRL--RCPVYATPFTAALA 103
>UniRef50_Q1DC87 Cluster: Metallo-beta-lactamase family protein;
n=2; Cystobacterineae|Rep: Metallo-beta-lactamase family
protein - Myxococcus xanthus (strain DK 1622)
Length = 546
Score = 48.4 bits (110), Expect = 2e-04
Identities = 30/108 (27%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYND----ERRFPDFSYIVPEGPITS 436
+ + PLG ++G + +++ G+ +++D G+ + PDFS++ +
Sbjct: 2 LHVIPLGGLGEIGLNSMVIACRGEMLLIDAGLMFPSAGMPGVDIIIPDFSHLKQNA---A 58
Query: 437 QIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDM 580
Q+ V+++H H DH GALPY+ + P+Y T T A+A LE++
Sbjct: 59 QLKGVLLTHGHEDHLGALPYLLNEVPV--PVYGTRFTLAMARHRLEEL 104
>UniRef50_A7RPX1 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 737
Score = 48.4 bits (110), Expect = 2e-04
Identities = 39/159 (24%), Positives = 66/159 (41%), Gaps = 3/159 (1%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 448
IK+ L D C LL + +LDCG +N+ D + Q+D
Sbjct: 5 IKLNVLSGAHDEAPLCYLLQVDEFRFLLDCG----WNETL---DMEIMESIKRHVQQVDA 57
Query: 449 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGESNFFTS 628
V++S + H G LPY+ G PIY T P + + + D + + E + F+
Sbjct: 58 VLVSFPDIYHMGGLPYLVGKCGLHCPIYTTIPVYKMGQMFMYDWYQ-CHQNSEEFDVFSL 116
Query: 629 QMIKDCMKKVTAVTLHQSVMVDNE---LEIKAYYAGHVL 736
+ K+ + Q+V + + + I Y AGH++
Sbjct: 117 DDVDAVFDKIIQLKYSQTVSLKGKGHGITITPYAAGHMI 155
>UniRef50_A1I7A4 Cluster: Putative uncharacterized protein; n=1;
Candidatus Desulfococcus oleovorans Hxd3|Rep: Putative
uncharacterized protein - Candidatus Desulfococcus
oleovorans Hxd3
Length = 549
Score = 48.0 bits (109), Expect = 2e-04
Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 4/115 (3%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHM--GY--NDERRFPDFSYIVPEGPITS 436
+KITPLG +++G + ++ G +D G+ GY + PD YI +G
Sbjct: 2 LKITPLGGTREIGLNMTVIEYGDTAFAIDAGLMFPEGYMLGVDIVLPDMDYIREKG---K 58
Query: 437 QIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVER 601
V+++H H DH GA+PY+ + PI+ T T + LE+ +A R
Sbjct: 59 NFAAVVLTHGHEDHIGAIPYLLRDMNV--PIFGTPFTLGLVRHKLEEAGLLANAR 111
>UniRef50_Q9P2I0 Cluster: Cleavage and polyadenylation specificity
factor subunit 2; n=26; Coelomata|Rep: Cleavage and
polyadenylation specificity factor subunit 2 - Homo
sapiens (Human)
Length = 782
Score = 48.0 bits (109), Expect = 2e-04
Identities = 43/159 (27%), Positives = 66/159 (41%), Gaps = 3/159 (1%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 448
IK+T L Q+ C LL + +LDCG DE D + + QID
Sbjct: 5 IKLTTLSGVQEESALCYLLQVDEFRFLLDCGW-----DEHFSMDIIDSLRKH--VHQIDA 57
Query: 449 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGESNFFTS 628
V++SH H GALPY +G IY T P + + + D+ + + + FT
Sbjct: 58 VLLSHPDPLHLGALPYAVGKLGLNCAIYATIPVYKMGQMFMYDLYQ-SRHNTEDFTLFTL 116
Query: 629 QMIKDCMKKVTAVTLHQSVMVDNE---LEIKAYYAGHVL 736
+ K+ + Q V + + L I AGH++
Sbjct: 117 DDVDAAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMI 155
>UniRef50_Q3LW64 Cluster: Regulator of transcription that contains
myb domains; n=1; Bigelowiella natans|Rep: Regulator of
transcription that contains myb domains - Bigelowiella
natans (Pedinomonas minutissima) (Chlorarachnion
sp.(strain CCMP 621))
Length = 636
Score = 47.6 bits (108), Expect = 3e-04
Identities = 27/102 (26%), Positives = 57/102 (55%), Gaps = 6/102 (5%)
Frame = +2
Query: 245 VVKLIMPDIKITPLGAGQDVGRSCILLTMGGKNIMLDCGM------HMGYNDERRFPDFS 406
+ +++ DI + PLG ++G +C+L+ + I++DCG+ H+G ++ PD +
Sbjct: 65 IEQVLDKDIIVVPLGGLGEIGMNCMLIGSKKRFILIDCGIMFTDLSHLGI--QKVIPDIN 122
Query: 407 YIVPEGPITSQIDCVIISHFHLDHCGALPYMSEMIGYTGPIY 532
++ I + I+ +II+H H DH GA+ ++ ++ +Y
Sbjct: 123 FLT---HIQNLIEGLIITHGHEDHIGAINWVLPILRTDALVY 161
>UniRef50_Q1IPV7 Cluster: Beta-lactamase-like precursor; n=2;
Acidobacteria|Rep: Beta-lactamase-like precursor -
Acidobacteria bacterium (strain Ellin345)
Length = 556
Score = 47.2 bits (107), Expect = 4e-04
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYND----ERRFPDFSYIVPEGPITS 436
+++ PLG + G +C+ + G +++D GM + + PD SY+V
Sbjct: 6 LQVIPLGGLGEFGMNCMAVRYGDDIVVIDAGMMFPEAELLGVDIVVPDISYLVEN---RD 62
Query: 437 QIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLED 577
++ ++++H H DH GALP++ + PIY T T A LE+
Sbjct: 63 KVRAILLTHGHEDHIGALPWILSELNV--PIYGTEFTLAYVEGKLEE 107
>UniRef50_Q1GQ91 Cluster: Beta-lactamase-like protein; n=43;
Bacteria|Rep: Beta-lactamase-like protein - Sphingopyxis
alaskensis (Sphingomonas alaskensis)
Length = 473
Score = 47.2 bits (107), Expect = 4e-04
Identities = 35/104 (33%), Positives = 52/104 (50%), Gaps = 1/104 (0%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 448
I I LGA V S LL IM+DCG+ G E R ++ + + ID
Sbjct: 22 ISIAFLGAAGTVTGSRYLLGDRSAKIMIDCGLFQG-GRELRERNWEPALSDH---RAIDT 77
Query: 449 VIISHFHLDHCGALP-YMSEMIGYTGPIYMTHPTKAIAPILLED 577
++++H HLDH G +P ++ E G++G I T T + +LL D
Sbjct: 78 IVLTHAHLDHSGYIPRFVKE--GWSGRILCTDATADLCGLLLPD 119
>UniRef50_Q04EG7 Cluster: Predicted hydrolase of the
metallo-beta-lactamase superfamily; n=3;
Leuconostocaceae|Rep: Predicted hydrolase of the
metallo-beta-lactamase superfamily - Oenococcus oeni
(strain BAA-331 / PSU-1)
Length = 636
Score = 47.2 bits (107), Expect = 4e-04
Identities = 30/106 (28%), Positives = 54/106 (50%), Gaps = 4/106 (3%)
Frame = +2
Query: 254 LIMPDIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYND----ERRFPDFSYIVPE 421
++ + I P G ++ G++ +T+ + +LD G+ D + PDF+Y+V
Sbjct: 4 MVKTALSIIPFGGVRENGKNMYAVTVNDEIYILDAGLKYPETDLLGVDVVVPDFNYLVDH 63
Query: 422 GPITSQIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIA 559
Q+ V ++H H D GALPY+ E++ P++ T T A+A
Sbjct: 64 A---DQVVGVFLTHGHADAIGALPYLLEVLRV--PVFGTEFTLALA 104
>UniRef50_Q5NLC0 Cluster: Metallo-beta-lactamase hydrolase subunit;
n=8; Sphingomonadales|Rep: Metallo-beta-lactamase
hydrolase subunit - Zymomonas mobilis
Length = 546
Score = 46.8 bits (106), Expect = 6e-04
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 4/104 (3%)
Frame = +2
Query: 284 LGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQ----IDCV 451
LG ++G + L GK +M+D G+ G + +P I+P+ + + +
Sbjct: 13 LGGSGEIGMNANLYGCDGKWVMVDLGITFG---DASYPGVEVILPDIEFIEERAKDLLGI 69
Query: 452 IISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMR 583
+I+H H DH GA+PY++ +G PIY T T + L++ R
Sbjct: 70 VITHGHEDHIGAIPYLAADLGV--PIYATPFTAGLIRSKLQEER 111
>UniRef50_Q5GSG7 Cluster: Predicted hydrolase of the
metallo-beta-lactamase superfamily; n=10;
Rickettsiales|Rep: Predicted hydrolase of the
metallo-beta-lactamase superfamily - Wolbachia sp.
subsp. Brugia malayi (strain TRS)
Length = 544
Score = 46.8 bits (106), Expect = 6e-04
Identities = 36/110 (32%), Positives = 56/110 (50%), Gaps = 4/110 (3%)
Frame = +2
Query: 281 PLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQ----IDC 448
PLG +G + L GK IM+D G+ G+ DE P ++ + +Q +
Sbjct: 12 PLGGVGRIGMNVNLYHYRGKWIMIDLGI--GFADET-MPGIELLIADVSFIAQRKKDLLG 68
Query: 449 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVE 598
+II+H H DHCGA+PY+ + + PIY TK A L E +++ +E
Sbjct: 69 IIITHAHEDHCGAVPYLWKEL--QCPIY---TTKFTANFLKEKLKEFRLE 113
>UniRef50_A4EC75 Cluster: Putative uncharacterized protein; n=1;
Collinsella aerofaciens ATCC 25986|Rep: Putative
uncharacterized protein - Collinsella aerofaciens ATCC
25986
Length = 556
Score = 46.8 bits (106), Expect = 6e-04
Identities = 25/109 (22%), Positives = 53/109 (48%), Gaps = 4/109 (3%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRF----PDFSYIVPEGPITS 436
+KI PLG +G++ + G +++D G+ + + PD++Y++
Sbjct: 9 LKIIPLGGLDGIGKNMTVFECGDDMVLVDAGLMFPDDSQPGIDLVLPDYTYVLEN---EE 65
Query: 437 QIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMR 583
++ ++++H H DH G+LPY+ + + PI+ + T L + R
Sbjct: 66 KLRGIVVTHGHEDHTGSLPYLLQDLNNKVPIFSSKLTLGFIEGKLSEFR 114
>UniRef50_A1VFA6 Cluster: Beta-lactamase domain protein; n=4;
Desulfovibrionaceae|Rep: Beta-lactamase domain protein -
Desulfovibrio vulgaris subsp. vulgaris (strain DP4)
Length = 554
Score = 46.8 bits (106), Expect = 6e-04
Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
Frame = +2
Query: 263 PDIKITPLGAGQDVGRSCILLTMGGKNIMLDCGM------HMGYNDERRFPDFSYIVPEG 424
P ITPLG ++G +C + + +++DCG+ H+G + P F +I+ +
Sbjct: 6 PHFTITPLGGLGEIGLNCQVWSTADSTVLIDCGLMFPDDYHLGV--DVVIPRFDHILQQ- 62
Query: 425 PITSQIDCVIISHFHLDHCGALPYM 499
++ +I++H H DH GALP++
Sbjct: 63 --RDKVRGIILTHGHEDHIGALPWL 85
>UniRef50_P54122 Cluster: UPF0036 protein Cgl1970/cg2160; n=31;
Actinobacteria (class)|Rep: UPF0036 protein
Cgl1970/cg2160 - Corynebacterium glutamicum
(Brevibacterium flavum)
Length = 718
Score = 46.8 bits (106), Expect = 6e-04
Identities = 23/84 (27%), Positives = 48/84 (57%), Gaps = 4/84 (4%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPE-GPITS--- 436
++I LG ++GR+ + + +++DCG+ + E P I+P+ GPI
Sbjct: 155 LRIYALGGISEIGRNMTVFEYNNRLLIVDCGVLFPSSGE---PGVDLILPDFGPIEDHLH 211
Query: 437 QIDCVIISHFHLDHCGALPYMSEM 508
++D ++++H H DH GA+P++ ++
Sbjct: 212 RVDALVVTHGHEDHIGAIPWLLKL 235
>UniRef50_Q9NV88 Cluster: Integrator complex subunit 9; n=41;
Eumetazoa|Rep: Integrator complex subunit 9 - Homo
sapiens (Human)
Length = 658
Score = 46.8 bits (106), Expect = 6e-04
Identities = 23/62 (37%), Positives = 37/62 (59%)
Frame = +2
Query: 395 PDFSYIVPEGPITSQIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLE 574
P+F E S +D ++IS++H ALPY++E G+TG +Y T PT I +L+E
Sbjct: 81 PEFCLPETELIDLSTVDVILISNYHC--MMALPYITEHTGFTGTVYATEPTVQIGRLLME 138
Query: 575 DM 580
++
Sbjct: 139 EL 140
>UniRef50_Q3UGU6 Cluster: Melanocyte cDNA, RIKEN full-length
enriched library, clone:G270022C12 product:cleavage and
polyadenylation specific factor 2, full insert sequence;
n=5; Eutheria|Rep: Melanocyte cDNA, RIKEN full-length
enriched library, clone:G270022C12 product:cleavage and
polyadenylation specific factor 2, full insert sequence
- Mus musculus (Mouse)
Length = 412
Score = 46.4 bits (105), Expect = 7e-04
Identities = 42/159 (26%), Positives = 66/159 (41%), Gaps = 3/159 (1%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 448
IK+T L Q+ C LL + +LDCG DE D + + QID
Sbjct: 5 IKLTTLSGVQEESALCYLLQVDEFRFLLDCGW-----DEHFSVDIIDSLRKH--VHQIDA 57
Query: 449 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGESNFFTS 628
V++SH H GALP+ +G IY T P + + + D+ + + + FT
Sbjct: 58 VLLSHPDPLHLGALPFAVGKLGLNCAIYATIPVYKMGQMFMYDLYQ-SRHNTEDFTLFTL 116
Query: 629 QMIKDCMKKVTAVTLHQSVMVDNE---LEIKAYYAGHVL 736
+ K+ + Q V + + L I AGH++
Sbjct: 117 DDVDAAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMI 155
>UniRef50_A5TU13 Cluster: Metal-dependent hydrolase; n=3;
Fusobacterium nucleatum|Rep: Metal-dependent hydrolase -
Fusobacterium nucleatum subsp. polymorphum ATCC 10953
Length = 631
Score = 46.4 bits (105), Expect = 7e-04
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 4/110 (3%)
Frame = +2
Query: 239 LDVVKLIMPDIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVP 418
+ V K + + + PLG ++VG++C ++ + I++D G + DE P ++P
Sbjct: 70 IKVSKKDLDKMYVIPLGGLEEVGKNCTIIQYKDEIIIVDAGAI--FPDEN-LPGIDLVIP 126
Query: 419 EGPIT----SQIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAI 556
+ S++ + ++H H DH G +PY+ E I IY T A+
Sbjct: 127 DYTFLENNKSKVKGLFVTHGHEDHIGGIPYLYEKIEKDTVIYGGKLTNAL 176
>UniRef50_A3ZTP5 Cluster: Metallo-beta-lactamase family protein;
n=1; Blastopirellula marina DSM 3645|Rep:
Metallo-beta-lactamase family protein - Blastopirellula
marina DSM 3645
Length = 462
Score = 46.4 bits (105), Expect = 7e-04
Identities = 32/105 (30%), Positives = 51/105 (48%)
Frame = +2
Query: 272 KITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCV 451
+IT GA V S L+ G +++DCG+ G R ++ + P T ++ V
Sbjct: 3 RITFYGAAGTVTGSKYLVEAGKAKVLVDCGLFQGLKKLREL-NWKKL-PFDAAT--VNSV 58
Query: 452 IISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRK 586
+++H H+DH G LP G+ + T TK +A +LL D K
Sbjct: 59 VLTHAHIDHIGFLPRFVR-DGFRNKVVCTPATKELAKLLLLDSAK 102
>UniRef50_Q2YZG4 Cluster: Predicted exonuclease of the
beta-lactamase fold involved in RNA processing; n=1;
uncultured gamma proteobacterium|Rep: Predicted
exonuclease of the beta-lactamase fold involved in RNA
processing - uncultured gamma proteobacterium
Length = 426
Score = 46.0 bits (104), Expect = 0.001
Identities = 17/46 (36%), Positives = 30/46 (65%)
Frame = +2
Query: 440 IDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLED 577
+D +++SH H+DH G +P + + G+ GP+Y T PT + ++L D
Sbjct: 15 VDAMLVSHAHMDHSGNIPNLVKK-GFKGPVYATPPTVDLCQLMLRD 59
>UniRef50_O29718 Cluster: MRNA 3'-end processing factor, putative;
n=1; Archaeoglobus fulgidus|Rep: MRNA 3'-end processing
factor, putative - Archaeoglobus fulgidus
Length = 407
Score = 45.6 bits (103), Expect = 0.001
Identities = 40/150 (26%), Positives = 70/150 (46%)
Frame = +2
Query: 284 LGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISH 463
LG ++VGRS +++ IM+D G+ +D FP + + P VI+SH
Sbjct: 7 LGGCREVGRSAVMVD----GIMIDYGVKP--SDPPEFP-LNGLSPRA--------VILSH 51
Query: 464 FHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGESNFFTSQMIKD 643
HLDH G P ++ Y + +T P+ ++ ILL D K+ FT + ++
Sbjct: 52 GHLDHIGVAP---NLMYYDPEVILTPPSHELSMILLRDSMKIM-----HPPPFTKRELRQ 103
Query: 644 CMKKVTAVTLHQSVMVDNELEIKAYYAGHV 733
+ V + + V + E++ + AGH+
Sbjct: 104 FESNIREVEYEEPITV-GDYEVEFFNAGHI 132
>UniRef50_A4SYL2 Cluster: RNA-metabolising metallo-beta-lactamase;
n=8; Betaproteobacteria|Rep: RNA-metabolising
metallo-beta-lactamase - Polynucleobacter sp.
QLW-P1DMWA-1
Length = 471
Score = 44.0 bits (99), Expect = 0.004
Identities = 33/107 (30%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Frame = +2
Query: 269 IKITPLGAGQDV--GRSCILLTMGGK--NIMLDCGMHMGYNDERRFPDFSYIVPEGPITS 436
+KI GA +V R + + + GK + M+D G+ G R + + P
Sbjct: 1 MKIQFFGAAGEVTGSRHSVEVMLSGKPRHFMVDYGLFQG----GREANTKNLEPLPFAAK 56
Query: 437 QIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLED 577
I+ V+++H H+DH G LP + G+ G IY T T + ILL D
Sbjct: 57 DIEFVVLTHAHIDHSGLLPRLCAQ-GFKGSIYCTPATYELLKILLPD 102
>UniRef50_Q5V0H4 Cluster: MRNA 3'-end processing factor; n=4;
Halobacteriaceae|Rep: MRNA 3'-end processing factor -
Haloarcula marismortui (Halobacterium marismortui)
Length = 411
Score = 43.6 bits (98), Expect = 0.005
Identities = 42/152 (27%), Positives = 69/152 (45%), Gaps = 2/152 (1%)
Frame = +2
Query: 284 LGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPI-TSQIDCVIIS 460
LG ++GRS +L+ ++++LD GM + P+ P+ T D V++S
Sbjct: 6 LGGADEIGRSAVLID---ESLLLDFGM------------LTDSPPQFPVRTPSPDAVVVS 50
Query: 461 HFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGESNF-FTSQMI 637
H HLDH G +P + PI+ T PT +A L D K+ G N FT +
Sbjct: 51 HGHLDHVGTIPALVSG-DARPPIHWTPPTYELAMTLARDTLKL---HGGTVNCPFTETNV 106
Query: 638 KDCMKKVTAVTLHQSVMVDNELEIKAYYAGHV 733
+ + +V+ ++ E+ Y AGH+
Sbjct: 107 RR-VTQVSETHGYRESFEAAGYEVTFYNAGHI 137
>UniRef50_Q6MTU5 Cluster: CONSERVED HYPOTEHTICAL PROTEIN; n=3;
Mollicutes|Rep: CONSERVED HYPOTEHTICAL PROTEIN -
Mycoplasma mycoides subsp. mycoides SC
Length = 583
Score = 43.2 bits (97), Expect = 0.007
Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 4/112 (3%)
Frame = +2
Query: 260 MPDIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYND----ERRFPDFSYIVPEGP 427
MPDIK T LG + G++ +L + +LD G+ D + P F YI
Sbjct: 1 MPDIKFTALGGQDERGKNLYVLEIDNDFFILDAGVKYPEKDILGIDTVIPKFDYIKQN-- 58
Query: 428 ITSQIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMR 583
+I + +++ + GA+PY+ + I PIY T+ IA I + +R
Sbjct: 59 -KKKIKGIFLTNPSAYNMGAVPYLLKEI--KAPIYCNEITELIAKIKFQKLR 107
>UniRef50_Q2LTE7 Cluster: Metallo-beta-lactamase superfamily; n=1;
Syntrophus aciditrophicus SB|Rep: Metallo-beta-lactamase
superfamily - Syntrophus aciditrophicus (strain SB)
Length = 831
Score = 43.2 bits (97), Expect = 0.007
Identities = 32/106 (30%), Positives = 55/106 (51%), Gaps = 3/106 (2%)
Frame = +2
Query: 197 LIFIILKRIFS*ASL--DVVKLIMPDIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHM 370
L+FI++ + S+ V ++ ++ +T + Q G + ++ GGK ++LD G
Sbjct: 537 LLFIVMLTFLAGGSVLQSVQRINNRELTVTAIDVHQ--GSATLVRFPGGKTLLLDGGGLP 594
Query: 371 GYN-DERRFPDFSYIVPEGPITSQIDCVIISHFHLDHCGALPYMSE 505
G D RF ++ EG +ID V++SH H DH G LP++ E
Sbjct: 595 GDAFDVGRFVVAPFLWHEG--IRKIDIVVLSHPHADHLGGLPFILE 638
>UniRef50_A7D2T2 Cluster: Beta-lactamase domain protein; n=1;
Halorubrum lacusprofundi ATCC 49239|Rep: Beta-lactamase
domain protein - Halorubrum lacusprofundi ATCC 49239
Length = 414
Score = 43.2 bits (97), Expect = 0.007
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 1/103 (0%)
Frame = +2
Query: 284 LGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISH 463
LG ++VGRS +L+ +++D G+ D ++P PE D V++SH
Sbjct: 6 LGGAREVGRSAVLVDDA---LLIDYGLLTA--DPPQYPLRD---PEP------DAVVVSH 51
Query: 464 FHLDHCGALPYMSEMIGYTGP-IYMTHPTKAIAPILLEDMRKV 589
HLDH GA+P + + G P I+ T PT AIA +L D K+
Sbjct: 52 GHLDHVGAVPAL--LKGDRRPTIHWTPPTAAIARVLARDTLKL 92
>UniRef50_Q50EJ8 Cluster: Metallo-beta-lactamase superfamily
hydrolase; n=45; Lactobacillales|Rep:
Metallo-beta-lactamase superfamily hydrolase -
Lactobacillus reuteri
Length = 593
Score = 42.3 bits (95), Expect = 0.012
Identities = 28/112 (25%), Positives = 58/112 (51%), Gaps = 4/112 (3%)
Frame = +2
Query: 266 DIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYND----ERRFPDFSYIVPEGPIT 433
+IKI P G ++ G++ + + + +LD G+ N+ + PD+ Y+
Sbjct: 4 NIKIIPFGGVRENGKNMYAVEIEDQIFILDTGLKYPENELMGIDVVIPDWEYLREH---K 60
Query: 434 SQIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKV 589
+I V ++H H D GALPY ++ + P++ + T A+A + +++ ++V
Sbjct: 61 DKIVGVFLTHGHADSIGALPYF--LMDFNVPVFGSEMTIALAKLAVKNHKEV 110
>UniRef50_A6VTQ0 Cluster: Beta-lactamase domain protein; n=9;
Proteobacteria|Rep: Beta-lactamase domain protein -
Marinomonas sp. MWYL1
Length = 447
Score = 41.9 bits (94), Expect = 0.016
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 7/98 (7%)
Frame = +2
Query: 266 DIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDF--SYIVPEGP--IT 433
D+ PLG ++G + L G+ +M+DCG+ +N+ D S IV P I+
Sbjct: 7 DLWFLPLGGTGEIGMNMNLYGHDGQWLMVDCGV--SFNEPLTADDLRTSEIVCADPRFIS 64
Query: 434 SQ---IDCVIISHFHLDHCGALPYMSEMIGYTGPIYMT 538
Q + ++I+H H DH GALP++ + P+Y T
Sbjct: 65 EQKERLAGIVITHAHEDHVGALPFLWRR--FKCPVYTT 100
>UniRef50_UPI000049A022 Cluster: cleavage and polyadenylation
specificity factor; n=1; Entamoeba histolytica
HM-1:IMSS|Rep: cleavage and polyadenylation specificity
factor - Entamoeba histolytica HM-1:IMSS
Length = 693
Score = 41.5 bits (93), Expect = 0.021
Identities = 28/89 (31%), Positives = 42/89 (47%)
Frame = +2
Query: 320 LLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISHFHLDHCGALPYM 499
LL + I+LDCG+ + E I+ + S ID V+ISH L H GALPY+
Sbjct: 20 LLEINSTKILLDCGVDCNFTRE--------IIEKYDSISDIDIVLISHSDLRHMGALPYI 71
Query: 500 SEMIGYTGPIYMTHPTKAIAPILLEDMRK 586
+ IY T P + + +++ K
Sbjct: 72 ANK-NPNCSIYTTDPVGKMGYLCMKEAIK 99
>UniRef50_Q2SRM2 Cluster: Metallo-beta-lactamase superfamily
protein; n=4; Mollicutes|Rep: Metallo-beta-lactamase
superfamily protein - Mycoplasma capricolum subsp.
capricolum (strain California kid / ATCC27343 / NCTC
10154)
Length = 611
Score = 41.5 bits (93), Expect = 0.021
Identities = 28/115 (24%), Positives = 55/115 (47%), Gaps = 4/115 (3%)
Frame = +2
Query: 272 KITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYND----ERRFPDFSYIVPEGPITSQ 439
KI LG ++VG++ + + IM+D G+ + PD+SY+V +
Sbjct: 62 KIFALGGLEEVGKNTYCIEYDNELIMIDAGVKFPESTMLGVSAVIPDYSYLVEN---QKK 118
Query: 440 IDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERK 604
I + I+H H DH G + Y+ + + I + + K A ++ + +++ +E K
Sbjct: 119 IKALFITHGHEDHIGGIQYLVQQV----KIPVIYAPKLAAMLIRDRLKEYKIEDK 169
>UniRef50_Q1AW46 Cluster: Putative uncharacterized protein; n=1;
Rubrobacter xylanophilus DSM 9941|Rep: Putative
uncharacterized protein - Rubrobacter xylanophilus
(strain DSM 9941 / NBRC 16129)
Length = 547
Score = 41.5 bits (93), Expect = 0.021
Identities = 26/107 (24%), Positives = 52/107 (48%), Gaps = 6/107 (5%)
Frame = +2
Query: 275 ITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERR------FPDFSYIVPEGPITS 436
+ PLG ++G++ + +++D GM + DE PDF+Y+
Sbjct: 3 VVPLGGLGEIGKNMTAVHQRSGMLVVDAGM--AFPDEEMPGIDLVLPDFTYLREHA---D 57
Query: 437 QIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLED 577
++ ++++H H DH GA+PY+ + + P+Y T T + L++
Sbjct: 58 RLRGILLTHGHEDHVGAIPYL--LREFRAPVYGTRLTLGLVESKLQE 102
>UniRef50_Q54SH0 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 712
Score = 41.5 bits (93), Expect = 0.021
Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Frame = +2
Query: 434 SQIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGES 613
S ID ++IS++ + ALP+++E + G IY T PT I +LLE++ ++ + S
Sbjct: 115 STIDMILISNY--TNIYALPFITEYTNFQGKIYATEPTVQIGKLLLEELVQMDKQYSNSS 172
Query: 614 --NFFTSQMIKDCMKKV 658
N + + DC + +
Sbjct: 173 INNNNNNNNLSDCWQNI 189
>UniRef50_Q4PAM2 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 979
Score = 41.5 bits (93), Expect = 0.021
Identities = 30/116 (25%), Positives = 50/116 (43%), Gaps = 13/116 (11%)
Frame = +2
Query: 428 ITSQIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPI-LLE---------D 577
+ S ID V++SH LDH G Y +G +Y T P +++ + +LE D
Sbjct: 123 LASTIDLVLLSHSSLDHLGLYAYAHANLGLRCQVYATMPVQSMGKLTVLEAIQTWRSEVD 182
Query: 578 MRKVAVERKGESNFFTSQMIKDCMKKVTAVTLHQSVMVDNE---LEIKAYYAGHVL 736
+ K T ++D +++ V Q ++ + L + AY AGH L
Sbjct: 183 IEKECTSASTRRCLATPDQVEDAFEEIKTVRYMQPTHLEGKCASLTLTAYNAGHSL 238
>UniRef50_P47385 Cluster: UPF0036 protein MG139; n=4;
Mycoplasma|Rep: UPF0036 protein MG139 - Mycoplasma
genitalium
Length = 569
Score = 41.5 bits (93), Expect = 0.021
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Frame = +2
Query: 272 KITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYND----ERRFPDFSYIVPEGPITSQ 439
KI G Q+VG++ + + I++DCG+ +D P F +++ S+
Sbjct: 17 KIYAFGGIQEVGKNMYGIEYDDEIIIIDCGIKFASDDLLGINGIIPSFEHLIEN---QSK 73
Query: 440 IDCVIISHFHLDHCGALPYMSEMI 511
+ + I+H H DH G +PY+ + +
Sbjct: 74 VKALFITHGHEDHIGGVPYLLKQV 97
>UniRef50_A7Q525 Cluster: Chromosome undetermined scaffold_51, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_51, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 258
Score = 41.1 bits (92), Expect = 0.027
Identities = 23/65 (35%), Positives = 31/65 (47%)
Frame = +2
Query: 302 VGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISHFHLDHC 481
+GR + GK I+ DCG+ Y F I P S ID +++ FHLDH
Sbjct: 1 MGRYYAYTSYKGKTILFDCGILPTYTGTAALSYFDEIDP-----STIDVLLVIPFHLDHA 55
Query: 482 GALPY 496
+LPY
Sbjct: 56 ASLPY 60
>UniRef50_Q6KH27 Cluster: Predicted hydrolase; n=13; Mycoplasma|Rep:
Predicted hydrolase - Mycoplasma mobile
Length = 604
Score = 40.7 bits (91), Expect = 0.036
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Frame = +2
Query: 260 MPDIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRF----PDFSYIVPEGP 427
M K+ LG Q++G+S +L K ++D G+ + PD+SY+
Sbjct: 1 MQPTKLFGLGGVQEIGKSTFVLEHNKKIFIIDAGIKFADSFTTGIKGIIPDYSYLKAN-- 58
Query: 428 ITSQIDCVIISHFHLDHCGALPYM 499
I + I+H H DH G +PY+
Sbjct: 59 -QDNIQALFITHGHEDHIGGIPYL 81
>UniRef50_Q1NUX3 Cluster: Beta-lactamase-like:RNA-metabolising
metallo-beta-lactamase precursor; n=1; delta
proteobacterium MLMS-1|Rep:
Beta-lactamase-like:RNA-metabolising
metallo-beta-lactamase precursor - delta proteobacterium
MLMS-1
Length = 530
Score = 40.7 bits (91), Expect = 0.036
Identities = 30/95 (31%), Positives = 43/95 (45%)
Frame = +2
Query: 287 GAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISHF 466
G Q V S +L ++D G +G +D +P PE +I V I+H
Sbjct: 34 GGQQTVSGSLHVLKSPDGLYLIDVGRFIG-DDGANYP-----WPEDIPVGEIKAVFITHT 87
Query: 467 HLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILL 571
H DH G LP + GY GPI ++ + IA + L
Sbjct: 88 HADHIGRLPLLLRQ-GYRGPILLSRASYEIARLNL 121
>UniRef50_A0WB37 Cluster: DNA internalization-related competence
protein ComEC/Rec2 precursor; n=1; Geobacter lovleyi
SZ|Rep: DNA internalization-related competence protein
ComEC/Rec2 precursor - Geobacter lovleyi SZ
Length = 814
Score = 40.7 bits (91), Expect = 0.036
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVP--EGPITSQI 442
+++T L GQ G + ++ G+ +++D G ++ D R Y+VP G QI
Sbjct: 535 LRMTFLSVGQ--GDATLIQLPDGRTMLVDGGGYL--RDTGRDFGERYLVPALHGLSVKQI 590
Query: 443 DCVIISHFHLDHCGALPYMSE 505
D +++SH H DH G LP ++E
Sbjct: 591 DIMVLSHPHPDHLGGLPAVAE 611
>UniRef50_Q748A2 Cluster: Metallo-beta-lactamase family protein;
n=11; Proteobacteria|Rep: Metallo-beta-lactamase family
protein - Geobacter sulfurreducens
Length = 561
Score = 40.3 bits (90), Expect = 0.048
Identities = 30/120 (25%), Positives = 57/120 (47%), Gaps = 4/120 (3%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYND----ERRFPDFSYIVPEGPITS 436
++I PLG ++G + + G I+ DCG+ + PD +Y+
Sbjct: 14 LRIIPLGGLGEIGLNMMAYEHGEDIIVADCGLMFPEPQMLGIDLVIPDITYLRERA---G 70
Query: 437 QIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVAVERKGESN 616
++ ++++H H DH GALPY+ + + P+Y T T + E +++ +E + E N
Sbjct: 71 RVRGILLTHGHEDHIGALPYVLQELSL--PLYGTALTLG---FIREKLKEFDLESEVELN 125
>UniRef50_Q1IUF3 Cluster: Beta-lactamase-like precursor; n=1;
Acidobacteria bacterium Ellin345|Rep:
Beta-lactamase-like precursor - Acidobacteria bacterium
(strain Ellin345)
Length = 338
Score = 40.3 bits (90), Expect = 0.048
Identities = 22/69 (31%), Positives = 38/69 (55%)
Frame = +2
Query: 305 GRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISHFHLDHCG 484
G++ + +T G+++++D G +E R D + S+ID V+I+HFH DH G
Sbjct: 33 GQATLFVTPKGESLLIDTGWP---GNEGRDADRIAAAAKSAGLSRIDYVLITHFHDDHVG 89
Query: 485 ALPYMSEMI 511
+P + E I
Sbjct: 90 GVPNLVEKI 98
>UniRef50_Q03AI9 Cluster: Predicted hydrolase of the
metallo-beta-lactamase superfamily; n=1; Lactobacillus
casei ATCC 334|Rep: Predicted hydrolase of the
metallo-beta-lactamase superfamily - Lactobacillus casei
(strain ATCC 334)
Length = 413
Score = 39.9 bits (89), Expect = 0.063
Identities = 19/65 (29%), Positives = 34/65 (52%)
Frame = +2
Query: 380 DERRFPDFSYIVPEGPITSQIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIA 559
D + P + + P + + ISH H+DH GAL Y+ + I PIY++ P+ +
Sbjct: 47 DNGKLPHVPELFFDQPDVYTHEAIFISHLHIDHMGALQYLKKPI----PIYLSEPSYKLY 102
Query: 560 PILLE 574
+L++
Sbjct: 103 QLLIK 107
>UniRef50_Q02AY2 Cluster: Beta-lactamase domain protein; n=2;
Bacteria|Rep: Beta-lactamase domain protein - Solibacter
usitatus (strain Ellin6076)
Length = 415
Score = 39.5 bits (88), Expect = 0.084
Identities = 32/98 (32%), Positives = 47/98 (47%), Gaps = 2/98 (2%)
Frame = +2
Query: 260 MPDIKITPLGAGQDVGRSCI-LLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEG-PIT 433
M ++++T A +G +C+ + T G I+LD G + R ++P+ I
Sbjct: 1 MNEVRLTVHRATHQIGGNCVEISTEDGHRIILDVGRPLDAPQSARG-----LLPKSLDIG 55
Query: 434 SQIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPT 547
S ID V+ISH H DH G L E + PIY PT
Sbjct: 56 SPIDGVLISHPHQDHYGVL----EDVPADWPIYPGEPT 89
>UniRef50_A7AAI5 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Parabacteroides merdae ATCC 43184
Length = 261
Score = 39.5 bits (88), Expect = 0.084
Identities = 24/61 (39%), Positives = 32/61 (52%)
Frame = +2
Query: 308 RSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISHFHLDHCGA 487
R+ +L+ GK I+LDCG PDF + V T ++D V+ISH H DH G
Sbjct: 35 RTSVLVETDGKRILLDCG-----------PDFRWQVIRNK-TYRLDAVLISHEHYDHVGG 82
Query: 488 L 490
L
Sbjct: 83 L 83
>UniRef50_Q3LWF4 Cluster: Ysh1 3' mRNA end processing factor; n=1;
Bigelowiella natans|Rep: Ysh1 3' mRNA end processing
factor - Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 544
Score = 39.5 bits (88), Expect = 0.084
Identities = 23/75 (30%), Positives = 37/75 (49%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 448
+KI LG +G SCI + + +LD G+ +++ IT ++
Sbjct: 7 VKILQLGGTFQIGNSCIYVMIKNTIFILDIGIIRSDKYWMHLESINFLKK---ITKPLN- 62
Query: 449 VIISHFHLDHCGALP 493
+ISH+HLDH G+LP
Sbjct: 63 FLISHYHLDHIGSLP 77
>UniRef50_A6NRM5 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 768
Score = 39.1 bits (87), Expect = 0.11
Identities = 26/81 (32%), Positives = 42/81 (51%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 448
+ +T L GQ G+S ILLT G ++DCG G D+ Y+ G S +D
Sbjct: 529 LSVTVLDVGQ--GQS-ILLTAQGSTALVDCGGSGG--DDPGDIAADYVQAMG--RSTLDL 581
Query: 449 VIISHFHLDHCGALPYMSEMI 511
++++H+H DH +P + E +
Sbjct: 582 LVLTHYHSDHACGVPELMERL 602
>UniRef50_A0W430 Cluster: Beta-lactamase-like; n=1; Geobacter
lovleyi SZ|Rep: Beta-lactamase-like - Geobacter lovleyi
SZ
Length = 422
Score = 39.1 bits (87), Expect = 0.11
Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 5/112 (4%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 448
+K T ++G +CI ++ +I+LD G+ + N + + E + + D
Sbjct: 1 MKFTIHRGSHEIGGTCIRISTETISILLDAGLPLAANSQP--------LTEADLAA--DA 50
Query: 449 VIISHFHLDHCGALPYM-SEMIGYTGPIY--MTHPTKAIA--PILLEDMRKV 589
+IISH H DHCG L + S M Y G + + + T+ P+L D R +
Sbjct: 51 LIISHSHQDHCGLLDTIPSSMPVYIGKVAKGLLNATRLFLGHPLLANDFRTI 102
>UniRef50_Q1PWM3 Cluster: Similar to competence protein ComA; n=1;
Candidatus Kuenenia stuttgartiensis|Rep: Similar to
competence protein ComA - Candidatus Kuenenia
stuttgartiensis
Length = 829
Score = 38.7 bits (86), Expect = 0.15
Identities = 47/208 (22%), Positives = 84/208 (40%), Gaps = 7/208 (3%)
Frame = +2
Query: 128 LFL*NIVLIINTPRYLLANHFVSLIFIILKRIFS*ASLDVVKLIMPDIKITPLGAGQDVG 307
+F+ ++L R L+ H++ ++ L ++K +K+T L G G
Sbjct: 529 IFVYYLLLFFLLYRTYLSIHYLHIVLWGLISANVLTFSGIIKSRPHALKVTCLDVGH--G 586
Query: 308 RSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISHFHLDHCGA 487
+ + GKNI+ D G Y+ ++ ++ E +ID VI+SH H DH
Sbjct: 587 AALFIQFPNGKNILYDAGTWHNYDVGKQIVT-PFLWSEK--IKKIDLVILSHEHNDHWSG 643
Query: 488 LPYMSEMIG----YTGPIYMTHPTKAIAPILLEDMRKVAVERKGESNFFTSQMIKDCMKK 655
LP + E Y+ P + T I+ E + K + S+ + + K
Sbjct: 644 LPSIIERFNVKRVYSQPYFFQSET---GRIIHERLHKKNIHTAALSHGLEIKGFEPVTVK 700
Query: 656 VTAVTLHQSVMV---DNELEIKAYYAGH 730
+ + S + DN +K Y+GH
Sbjct: 701 ILHPSFSPSSSLSTNDNSCVVKIEYSGH 728
>UniRef50_Q024Z8 Cluster: Beta-lactamase domain protein precursor;
n=1; Solibacter usitatus Ellin6076|Rep: Beta-lactamase
domain protein precursor - Solibacter usitatus (strain
Ellin6076)
Length = 269
Score = 38.7 bits (86), Expect = 0.15
Identities = 27/93 (29%), Positives = 42/93 (45%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDC 448
+K L +G G + +L T + I++D G+ M +R + G ID
Sbjct: 12 VKFCVLASGSS-GNAALLATENTR-ILVDAGLSMRELRKR-------LALIGETLESIDA 62
Query: 449 VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPT 547
+I++H H DH LP ++ G IYMT T
Sbjct: 63 IIVTHEHSDHVSGLPVLARAKGLRAVIYMTRLT 95
>UniRef50_Q8TVW4 Cluster: Predicted hydrolase of the
metallo-beta-lactamase superfamily; n=1; Methanopyrus
kandleri|Rep: Predicted hydrolase of the
metallo-beta-lactamase superfamily - Methanopyrus
kandleri
Length = 334
Score = 38.7 bits (86), Expect = 0.15
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +2
Query: 356 CGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISHFHLDHCGALP 493
CG+ + Y D R F D + +GP + D VI++H H DH G +P
Sbjct: 10 CGVVVDYGDTRVFVDVTD--RKGPYVKRADAVIVTHPHRDHYGGVP 53
>UniRef50_Q0W6M0 Cluster: Metallo-beta-lactamase; n=3;
Euryarchaeota|Rep: Metallo-beta-lactamase - Uncultured
methanogenic archaeon RC-I
Length = 445
Score = 38.7 bits (86), Expect = 0.15
Identities = 30/129 (23%), Positives = 60/129 (46%), Gaps = 14/129 (10%)
Frame = +2
Query: 260 MPDIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMG---YNDERRFPDFSYI------ 412
M D+ I +G ++VGR+ + +G + +++D G+ + +++ + +
Sbjct: 1 MKDVGIIAVGGYEEVGRNMTAIRVGKEIVIMDMGVRLDRIQIHEDTEMENMHSLDLIQMG 60
Query: 413 -VPEGPITSQIDC----VIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLED 577
+P+ I +D ++ +H HLDH GA+P ++ Y PI T T + ++
Sbjct: 61 AIPDDKILKNVDGNVVGIVCTHGHLDHIGAVPKLAHR--YKCPIIGTPFTTELIRQEIKS 118
Query: 578 MRKVAVERK 604
RK V K
Sbjct: 119 ERKFKVTNK 127
>UniRef50_Q58271 Cluster: UPF0036 protein MJ0861; n=15; Archaea|Rep:
UPF0036 protein MJ0861 - Methanococcus jannaschii
Length = 448
Score = 38.7 bits (86), Expect = 0.15
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 14/104 (13%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSY----------IVP 418
++I +G ++VGR+ + + G+ I+LD G+ + D S I+P
Sbjct: 3 LEIIAIGGYEEVGRNMTAVNVDGEIIILDMGIRLDRVLIHEDTDISKLHSLELIEKGIIP 62
Query: 419 EGPITSQID----CVIISHFHLDHCGALPYMSEMIGYTGPIYMT 538
+ I+ +++SH HLDH GA+P ++ Y PI T
Sbjct: 63 NDTVMKNIEGEVKAIVLSHGHLDHIGAVPKLAHR--YNAPIIGT 104
>UniRef50_Q82SI4 Cluster: Metallo-beta-lactamase superfamily; n=4;
Proteobacteria|Rep: Metallo-beta-lactamase superfamily -
Nitrosomonas europaea
Length = 333
Score = 38.3 bits (85), Expect = 0.19
Identities = 29/96 (30%), Positives = 42/96 (43%), Gaps = 8/96 (8%)
Frame = +2
Query: 305 GRSCI-LLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISHFHLDHC 481
GR+ I L+T G K ++D G I PE QID + ++H HLDH
Sbjct: 32 GRAAIHLITEGDKAALVDTGTRFSVPGTMAALAHKQITPE-----QIDYIFLTHIHLDHA 86
Query: 482 GA-------LPYMSEMIGYTGPIYMTHPTKAIAPIL 568
G LP ++ G +M +P K IA ++
Sbjct: 87 GGASEFMKWLPNARLVVHPRGASHMANPIKLIAGVM 122
>UniRef50_Q6F968 Cluster: Competence factor involved in DNA uptake;
n=2; Acinetobacter|Rep: Competence factor involved in
DNA uptake - Acinetobacter sp. (strain ADP1)
Length = 792
Score = 38.3 bits (85), Expect = 0.19
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 5/93 (5%)
Frame = +2
Query: 248 VKLIMPDIKITPLGAG-QDVGRS-CILLTMGGKNIMLDCGMHMGYNDERRFP-DFSYIVP 418
V L++P I P DVG+ I + + I+LD G GY DE +F +VP
Sbjct: 522 VPLLIPSKMIRPTQISILDVGQGQSIFIQDQTQRILLDTG---GYYDESKFSIGKQVVVP 578
Query: 419 --EGPITSQIDCVIISHFHLDHCGALPYMSEMI 511
+ Q+D VI++H DH G LP + ++I
Sbjct: 579 FLKSQGVHQLDRVILTHLDQDHSGGLPAVLQLI 611
>UniRef50_A0RTJ7 Cluster: Hydrolase of the metallo-beta-lactamase
superfamily; n=1; Cenarchaeum symbiosum|Rep: Hydrolase
of the metallo-beta-lactamase superfamily - Cenarchaeum
symbiosum
Length = 496
Score = 38.3 bits (85), Expect = 0.19
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2
Query: 434 SQIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPI 565
+ +D V++SH H+DHC + Y+ I P+Y T TK I +
Sbjct: 87 TSVDAVLLSHAHVDHCAYIKYLRPEI----PVYCTEATKMILQV 126
>UniRef50_Q98JF7 Cluster: Mll1963 protein; n=1; Mesorhizobium
loti|Rep: Mll1963 protein - Rhizobium loti
(Mesorhizobium loti)
Length = 315
Score = 37.9 bits (84), Expect = 0.26
Identities = 21/58 (36%), Positives = 29/58 (50%)
Frame = +2
Query: 317 ILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISHFHLDHCGAL 490
++L MGGK IM+D G +G + + G ID ++ISHFH DH L
Sbjct: 91 VVLKMGGKLIMMDAGSGVGQWQANATHLPANMAAAGIDYKAIDTIMISHFHPDHVWGL 148
>UniRef50_Q8YS71 Cluster: All3220 protein; n=10; Cyanobacteria|Rep:
All3220 protein - Anabaena sp. (strain PCC 7120)
Length = 555
Score = 37.9 bits (84), Expect = 0.26
Identities = 24/84 (28%), Positives = 40/84 (47%)
Frame = +2
Query: 314 CILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISHFHLDHCGALP 493
C+L+ MG I+LDCG+ + ++ + V G S D V+++H H DH L
Sbjct: 35 CLLVRMGPHRILLDCGLADISSIQK---SLTPSVKRGNPPSPADLVLVTHAHPDHARGLL 91
Query: 494 YMSEMIGYTGPIYMTHPTKAIAPI 565
+ + PIY + T + P+
Sbjct: 92 ALHQAFPNL-PIYGSEVTSKLLPL 114
>UniRef50_Q4L6T9 Cluster: Similar to ComEC late competence protein
3; n=1; Staphylococcus haemolyticus JCSC1435|Rep:
Similar to ComEC late competence protein 3 -
Staphylococcus haemolyticus (strain JCSC1435)
Length = 726
Score = 37.9 bits (84), Expect = 0.26
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 6/91 (6%)
Frame = +2
Query: 257 IMPDIK-ITPLGAGQDVGRSCILLTMGGKNIMLDCG---MHMGYNDERRFPDFSYIVP-- 418
+ P++ IT GQ G S I T + +M+D G + +G D + +I+P
Sbjct: 462 VRPNVSTITFFDVGQ--GDSLIFQTTKQETVMVDTGGKEIKIGNIDNHNIAKY-HIMPTL 518
Query: 419 EGPITSQIDCVIISHFHLDHCGALPYMSEMI 511
+ ++ID +II+H H DH G LPY+++ I
Sbjct: 519 KQKRITKIDHLIITHPHADHIGELPYIAQHI 549
>UniRef50_A6CVL4 Cluster: Beta-lactamase-like protein; n=1; Vibrio
shilonii AK1|Rep: Beta-lactamase-like protein - Vibrio
shilonii AK1
Length = 542
Score = 37.9 bits (84), Expect = 0.26
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +2
Query: 422 GPITSQIDCVIISHFHLDHCGALPYMSEMIGYTG 523
G +++D + I+H H+DH G+LPY+ + G+ G
Sbjct: 166 GVALNELDKIFITHLHVDHFGSLPYLYQFGGWNG 199
>UniRef50_Q5KIP3 Cluster: Cleavage and polyadenylation specificity
factor subunit, putative; n=1; Filobasidiella
neoformans|Rep: Cleavage and polyadenylation specificity
factor subunit, putative - Cryptococcus neoformans
(Filobasidiella neoformans)
Length = 899
Score = 37.9 bits (84), Expect = 0.26
Identities = 27/97 (27%), Positives = 40/97 (41%), Gaps = 4/97 (4%)
Frame = +2
Query: 269 IKITPLGAGQ-DVGRS---CILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITS 436
I +TPL A + S C LL + I+LD G Y + + Y +
Sbjct: 2 ITLTPLSASAAETSPSEPICYLLELDDARILLDMGQR-DYRASSQQCSWDYEEAVRDLAP 60
Query: 437 QIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPT 547
+ V++SH ++ PY G T P+Y T PT
Sbjct: 61 TLSLVLLSHSSSNYLSLYPYARARWGLTCPVYATQPT 97
>UniRef50_Q9K9I5 Cluster: BH2662 protein; n=43; Bacteria|Rep: BH2662
protein - Bacillus halodurans
Length = 555
Score = 37.5 bits (83), Expect = 0.34
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Frame = +2
Query: 284 LGAGQDVGRSCILLTMGGKNIMLDCGMHMGYND----ERRFPDFSYIVPEGPITSQIDCV 451
LG ++G++ + + I++D G+ ++ + PD+SY+V ++I +
Sbjct: 14 LGGLGEIGKNTYAVQFQDEIILIDAGIKFPEDELLGIDYVIPDYSYLVKN---ENKIKGL 70
Query: 452 IISHFHLDHCGALPYMSEMIGYTGPIY 532
I+H H DH G +PY+ + PIY
Sbjct: 71 FITHGHEDHIGGIPYLLREVNI--PIY 95
>UniRef50_Q1ATH2 Cluster: Beta-lactamase-like protein; n=1;
Rubrobacter xylanophilus DSM 9941|Rep:
Beta-lactamase-like protein - Rubrobacter xylanophilus
(strain DSM 9941 / NBRC 16129)
Length = 271
Score = 37.5 bits (83), Expect = 0.34
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +2
Query: 434 SQIDCVIISHFHLDHCGALPY 496
S ID V+ISH HLDHCG L +
Sbjct: 98 SDIDIVVISHLHLDHCGCLDF 118
>UniRef50_A6TMT5 Cluster: Beta-lactamase domain protein; n=1;
Alkaliphilus metalliredigens QYMF|Rep: Beta-lactamase
domain protein - Alkaliphilus metalliredigens QYMF
Length = 404
Score = 37.5 bits (83), Expect = 0.34
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 3/113 (2%)
Frame = +2
Query: 242 DVVKLIMPDIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPE 421
D + L +KI + GQ G + +++T GK I++D G + + SYI +
Sbjct: 112 DELNLSNEVLKIHFIDVGQ--GDATLIMTPAGKTILVDAG-----DRNQGETVVSYIKAQ 164
Query: 422 GPITSQIDCVIISHFHLDHCGALPYMSEMIGYTGPIYM---THPTKAIAPILL 571
G T ID +I SH H DH G + + ++ G +YM T TK +LL
Sbjct: 165 GIET--IDLLIASHPHADHIGGMASVVQVF-EIGEVYMPEVTANTKTFETLLL 214
>UniRef50_A7I6D7 Cluster: Beta-lactamase domain protein; n=1;
Candidatus Methanoregula boonei 6A8|Rep: Beta-lactamase
domain protein - Methanoregula boonei (strain 6A8)
Length = 287
Score = 37.5 bits (83), Expect = 0.34
Identities = 26/88 (29%), Positives = 40/88 (45%)
Frame = +2
Query: 257 IMPDIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITS 436
I P I G D GR + + G NI + + G+N + YI+ G S
Sbjct: 3 ITPHIHALKTPLGPDPGRFVHVYLIYGDNITV---IDTGFNGTEKLIT-EYILSTGRNPS 58
Query: 437 QIDCVIISHFHLDHCGALPYMSEMIGYT 520
+I VI++H H DH G+ + ++ G T
Sbjct: 59 EIRLVILTHAHPDHTGSAKALRDLTGCT 86
>UniRef50_Q8DAV3 Cluster: Rec2-related protein; n=2; Vibrio
vulnificus|Rep: Rec2-related protein - Vibrio vulnificus
Length = 749
Score = 37.1 bits (82), Expect = 0.45
Identities = 31/122 (25%), Positives = 54/122 (44%), Gaps = 1/122 (0%)
Frame = +2
Query: 143 IVLIINTPRYLLANHFVSL-IFIILKRIFS*ASLDVVKLIMPDIKITPLGAGQDVGRSCI 319
+VL+ ++ HF+ + ++L + S +SL V L I + +G G +
Sbjct: 455 VVLVALCALAVMLRHFIRWQLSVVLIILLSISSLSVHSLSRTRIDVLDVGHGL-----AV 509
Query: 320 LLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISHFHLDHCGALPYM 499
L+ GK ++ D G + ++ G + +D VIISH DH G LPY+
Sbjct: 510 LIEKDGKTLLYDTGKSWHGGSIAQQVIEPILLSRG--SRSLDGVIISHQDDDHAGGLPYL 567
Query: 500 SE 505
+
Sbjct: 568 QQ 569
>UniRef50_Q72BD6 Cluster: Metallo-beta-lactamase family protein;
n=1; Desulfovibrio vulgaris subsp. vulgaris str.
Hildenborough|Rep: Metallo-beta-lactamase family protein
- Desulfovibrio vulgaris (strain Hildenborough / ATCC
29579 / NCIMB8303)
Length = 415
Score = 37.1 bits (82), Expect = 0.45
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYND-ERRFPDFSYIVPEGPITSQID 445
++IT Q++G SC+ L+ GG++I++D G + + E + D S+ +
Sbjct: 1 MEITIHRGTQEIGGSCVQLSSGGRSILIDAGSPLRESQCEVKLSDISF-----------E 49
Query: 446 CVIISHFHLDHCGAL 490
V++SH H DH G +
Sbjct: 50 AVLVSHPHQDHYGLI 64
>UniRef50_Q0EY53 Cluster: Putative uncharacterized protein; n=1;
Mariprofundus ferrooxydans PV-1|Rep: Putative
uncharacterized protein - Mariprofundus ferrooxydans
PV-1
Length = 552
Score = 37.1 bits (82), Expect = 0.45
Identities = 24/102 (23%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Frame = +2
Query: 263 PDIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPE----GPI 430
P ++ P G + G++ ++ + +++DCG MG+ + + +VP+ +
Sbjct: 4 PVLRCFPFGGVGEFGKNMMVYAVDDDAVIVDCG--MGFPEPGQH-GVDIVVPDIAALDEL 60
Query: 431 TSQIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAI 556
+I +I++H H DH G +P + + P+Y T T A+
Sbjct: 61 GLKIHALILTHGHEDHIGGVPILLPRLKL--PVYGTEVTLAL 100
>UniRef50_A5D4E8 Cluster: Predicted exonuclease of the
beta-lactamase fold; n=1; Pelotomaculum
thermopropionicum SI|Rep: Predicted exonuclease of the
beta-lactamase fold - Pelotomaculum thermopropionicum SI
Length = 436
Score = 37.1 bits (82), Expect = 0.45
Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 19/105 (18%)
Frame = +2
Query: 299 DVGRSCILLTMGGKNIMLDCGMHMGYNDERRF-------------------PDFSYIVPE 421
D+G SC+ L G I++D G+ + D+ RF PD +
Sbjct: 11 DIGGSCVELQSGDSRIIIDLGLPLAAKDDSRFDSSTLRLRTGAELVNSGILPDIRGLYAW 70
Query: 422 GPITSQIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAI 556
+ID + +SH H+DH G + ++S + P+Y T+ +
Sbjct: 71 DTECRRIDALFLSHAHIDHYGLVNFISPDV----PVYSGEATRRL 111
>UniRef50_A2EZM9 Cluster: Metallo-beta-lactamase superfamily
protein; n=1; Trichomonas vaginalis G3|Rep:
Metallo-beta-lactamase superfamily protein - Trichomonas
vaginalis G3
Length = 268
Score = 37.1 bits (82), Expect = 0.45
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Frame = +2
Query: 308 RSC-ILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISHFHLDHCG 484
R+C IL GKN+++DCG D R+ ++ EG + I+ +IISH H DH
Sbjct: 43 RTCGILKISNGKNVLIDCG-----TDIRKC-----LLREG--ITHIEGIIISHCHADHVH 90
Query: 485 ALPYMSEMI-GYTGPIY 532
LP + + G+ PIY
Sbjct: 91 GLPDLVKFYNGHPIPIY 107
>UniRef50_Q9HKD3 Cluster: Putative uncharacterized protein Ta0668;
n=2; Thermoplasma|Rep: Putative uncharacterized protein
Ta0668 - Thermoplasma acidophilum
Length = 322
Score = 37.1 bits (82), Expect = 0.45
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +2
Query: 437 QIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTH 541
+ID V I+H H+DH G + Y+ E G P YM H
Sbjct: 62 KIDFVFITHLHIDHLGGVLYLHEKYGI--PAYMNH 94
>UniRef50_Q18IK7 Cluster: Ribonuclease Z; n=1; Haloquadratum walsbyi
DSM 16790|Rep: Ribonuclease Z - Haloquadratum walsbyi
(strain DSM 16790)
Length = 304
Score = 37.1 bits (82), Expect = 0.45
Identities = 22/63 (34%), Positives = 30/63 (47%)
Frame = +2
Query: 305 GRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISHFHLDHCG 484
G SCI L + G I+ DCG ++R ++ + +D V ISHFH DH
Sbjct: 18 GTSCIYLNVFGDKILFDCGE----GSQQRLMKYNS-------SPNVDAVFISHFHADHTL 66
Query: 485 ALP 493
LP
Sbjct: 67 GLP 69
>UniRef50_Q2SR38 Cluster: Metallo-beta-lactamase superfamily
protein, putative; n=4; Mycoplasma|Rep:
Metallo-beta-lactamase superfamily protein, putative -
Mycoplasma capricolum subsp. capricolum (strain
California kid / ATCC27343 / NCTC 10154)
Length = 688
Score = 36.7 bits (81), Expect = 0.59
Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 2/118 (1%)
Frame = +2
Query: 143 IVLIINTPRYLLANHFVSLIFIILKRIFS*ASLDVVKLIMPDIKITPLGAGQDVGRSCIL 322
I+L+I + ++SLIFI+L S + LI P + + L G +C +
Sbjct: 425 IILVIIKYNFKSIWSWISLIFILL------LSYLISWLIKPSVFLVMLNVGNG---NCFI 475
Query: 323 LTMGGKN--IMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISHFHLDHCGAL 490
KN I+ DCG+ G++ + Y + +D +IISH H DH A+
Sbjct: 476 FHDKFKNTTIINDCGVGKGFSKNIGYEFLKYFG-----INHVDLIIISHNHADHYNAI 528
>UniRef50_A6LS78 Cluster: Beta-lactamase domain protein precursor;
n=1; Clostridium beijerinckii NCIMB 8052|Rep:
Beta-lactamase domain protein precursor - Clostridium
beijerinckii NCIMB 8052
Length = 293
Score = 36.7 bits (81), Expect = 0.59
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = +2
Query: 299 DVGRS-CILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISHFHLD 475
DVG+ CIL+ + KN+++D G +D R+ F+Y+ G +++D VI +H H D
Sbjct: 52 DVGQGDCILVQVNNKNLLIDSGPK---SDRRKL--FNYL--SGLNLNKLDYVIATHPHED 104
Query: 476 HCG 484
H G
Sbjct: 105 HIG 107
>UniRef50_A5IIH1 Cluster: Metal-dependent hydrolase of the
beta-lactamase superfamily III; n=4; Legionella
pneumophila|Rep: Metal-dependent hydrolase of the
beta-lactamase superfamily III - Legionella pneumophila
(strain Corby)
Length = 255
Score = 36.7 bits (81), Expect = 0.59
Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 6/110 (5%)
Frame = +2
Query: 269 IKITPLGAGQD--VG----RSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPI 430
+KIT LG+G +G +S +LL + +++D G + Y+ R SY
Sbjct: 3 LKITFLGSGSSFAIGPENYQSNVLLELENDTLLIDAGTDIKYS--LRDQGLSY------- 53
Query: 431 TSQIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDM 580
I V ISH H DHCG L + + +I Y P + P + +++++
Sbjct: 54 -KDIKNVYISHLHYDHCGGLEWFA-LITYFDPNHSHKPCLIASDKIIKEL 101
>UniRef50_A5CEC6 Cluster: Metallo-beta-lactamase family protein;
n=10; Rickettsieae|Rep: Metallo-beta-lactamase family
protein - Orientia tsutsugamushi (strain Boryong)
(Rickettsia tsutsugamushi)
Length = 578
Score = 36.7 bits (81), Expect = 0.59
Identities = 29/113 (25%), Positives = 52/113 (46%), Gaps = 5/113 (4%)
Frame = +2
Query: 254 LIMPD-IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYN----DERRFPDFSYIVP 418
LI D + P+G ++G + + G+ IM+DCG + D S+I
Sbjct: 16 LIQTDKLVFIPIGGCNEIGMNVNIYHYQGEFIMVDCGAGFPSDFTPGANMLITDLSFIKA 75
Query: 419 EGPITSQIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLED 577
G ++ +I++H H DH G + Y+ + + PIY T+ T + L++
Sbjct: 76 SG---KKLAGLILTHAHEDHLGGVQYLLQDLDC--PIYTTNFTANFLSLRLKE 123
>UniRef50_Q64AS7 Cluster: Putative uncharacterized protein; n=1;
uncultured archaeon GZfos29E12|Rep: Putative
uncharacterized protein - uncultured archaeon GZfos29E12
Length = 549
Score = 36.7 bits (81), Expect = 0.59
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Frame = +2
Query: 434 SQIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPIL--LEDMRKVAVERKG 607
S ID +++SH H+DH G + ++ I P+Y + T+ + + + + + A+ KG
Sbjct: 117 SYIDGILLSHAHMDHTGDIGFLHHAI----PLYCSEATRTLVAAIDAVTNFKSNAIRSKG 172
Query: 608 ESNFFT-SQMIKDCMKKVTAVTLHQS--VMVDNEL 703
S F + + C K V L ++ VM D E+
Sbjct: 173 SSIAFNKTGALAGCPKIVHKDELVRNCKVMADGEV 207
>UniRef50_P54123 Cluster: UPF0036 protein slr0551; n=38;
Cyanobacteria|Rep: UPF0036 protein slr0551 -
Synechocystis sp. (strain PCC 6803)
Length = 640
Score = 36.7 bits (81), Expect = 0.59
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERR----FPDFSYIVPEGPITS 436
+KI PLG ++G++ + + ++LD G+ +D PD +Y+
Sbjct: 10 LKILPLGGLHEIGKNTCVFEYDDEILLLDAGLAFPTDDMHGVNVVLPDMTYLREN---RE 66
Query: 437 QIDCVIISHFHLDHCGALPY 496
+I ++++H H DH G + Y
Sbjct: 67 KIKGMVVTHGHEDHIGGIAY 86
>UniRef50_Q97S10 Cluster: Metallo-beta-lactamase superfamily
protein; n=18; Streptococcaceae|Rep:
Metallo-beta-lactamase superfamily protein -
Streptococcus pneumoniae
Length = 553
Score = 36.3 bits (80), Expect = 0.78
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Frame = +2
Query: 260 MPDIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERR----FPDFSYIVPEGP 427
M +I +T LG ++ G++ + +G +L+ G+ N++ P+ Y+
Sbjct: 1 MSNISLTTLGGVRENGKNMYIAEIGESIFVLNVGLKYPENEQLGVDVVIPNMDYLFEN-- 58
Query: 428 ITSQIDCVIISHFHLDHCGALPYM 499
+ +I V ++H H D GALPY+
Sbjct: 59 -SDRIAGVFLTHGHADAIGALPYL 81
>UniRef50_A7DE09 Cluster: Beta-lactamase domain protein; n=2;
Methylobacterium extorquens PA1|Rep: Beta-lactamase
domain protein - Methylobacterium extorquens PA1
Length = 293
Score = 36.3 bits (80), Expect = 0.78
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = +2
Query: 332 GGKNIMLDCGM-HMGYNDERRFPDFSYIVPEGPITSQIDCVIISHFHLDHCGALPYMSEM 508
G K +++D G H G + R P + + G +I+ V+++H H DH G L
Sbjct: 70 GRKPVLIDSGYGHFGPDTMGRVP--AALALAGVAPEEIETVLLTHLHPDHAGGLVKADGS 127
Query: 509 IGYTGPIYMTHPTKA 553
Y + H T+A
Sbjct: 128 AAYPNAELVVHATEA 142
>UniRef50_A6PKD4 Cluster: Beta-lactamase domain protein precursor;
n=1; Victivallis vadensis ATCC BAA-548|Rep:
Beta-lactamase domain protein precursor - Victivallis
vadensis ATCC BAA-548
Length = 276
Score = 36.3 bits (80), Expect = 0.78
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +2
Query: 320 LLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISHFHLDHCGAL 490
+L GGK I++D G N +R + +G +IDC++++H H DH G L
Sbjct: 72 VLKRGGKLILVDAG-----NGGKRGAMLRKLEQDGIPPEKIDCILLTHMHGDHIGGL 123
>UniRef50_Q9HLY7 Cluster: Putative uncharacterized protein Ta0086;
n=2; Thermoplasma|Rep: Putative uncharacterized protein
Ta0086 - Thermoplasma acidophilum
Length = 207
Score = 36.3 bits (80), Expect = 0.78
Identities = 24/62 (38%), Positives = 34/62 (54%)
Frame = +2
Query: 320 LLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISHFHLDHCGALPYM 499
LLT+ GKNI++D G G ++ D Y G ++ D VI++H H DH G L +
Sbjct: 24 LLTLDGKNILIDTGTAGG---GKKIID--YFNKNG---TKPDYVIVTHHHADHVGGLKEI 75
Query: 500 SE 505
SE
Sbjct: 76 SE 77
>UniRef50_A1S008 Cluster: Beta-lactamase domain protein; n=1;
Thermofilum pendens Hrk 5|Rep: Beta-lactamase domain
protein - Thermofilum pendens (strain Hrk 5)
Length = 295
Score = 36.3 bits (80), Expect = 0.78
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +2
Query: 437 QIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHP 544
++D V++SH H DH G LP + E G+ P+ + HP
Sbjct: 70 EVDAVVLSHRHYDHAGGLPALLEKAGFK-PV-VAHP 103
>UniRef50_Q55470 Cluster: Uncharacterized protein sll0514; n=1;
Synechocystis sp. PCC 6803|Rep: Uncharacterized protein
sll0514 - Synechocystis sp. (strain PCC 6803)
Length = 554
Score = 36.3 bits (80), Expect = 0.78
Identities = 28/100 (28%), Positives = 43/100 (43%)
Frame = +2
Query: 266 DIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQID 445
+I P G G G C+ L +G I+LDCG+ D + ++ P T +D
Sbjct: 14 NISFLPYGVGPRDGGICLELHLGPYRILLDCGLE----------DLTPLLAADPGT--VD 61
Query: 446 CVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPI 565
V SH H DH L + + PI + T+ + P+
Sbjct: 62 LVFCSHAHRDHGLGLWQFHQQFPHI-PILASEVTQRLLPL 100
>UniRef50_Q5SJ74 Cluster: Metallo-beta-lactamase superfamily
protein; n=3; Deinococci|Rep: Metallo-beta-lactamase
superfamily protein - Thermus thermophilus (strain HB8 /
ATCC 27634 / DSM 579)
Length = 573
Score = 35.9 bits (79), Expect = 1.0
Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 5/92 (5%)
Frame = +2
Query: 269 IKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQ--- 439
++I PLG ++G++ + + +LD G+ E P ++P +
Sbjct: 28 VEIIPLGGMGEIGKNITVFRFRDEIFVLDGGLAF---PEEGMPGVDLLIPRVDYLIEHRH 84
Query: 440 -IDCVIISHFHLDHCGALPYMSEMI-GYTGPI 529
I +++H H DH G LP++ MI G P+
Sbjct: 85 KIKAWVLTHGHEDHIGGLPFLLPMIFGKESPV 116
>UniRef50_Q0LNU4 Cluster: Beta-lactamase-like; n=1; Herpetosiphon
aurantiacus ATCC 23779|Rep: Beta-lactamase-like -
Herpetosiphon aurantiacus ATCC 23779
Length = 391
Score = 35.9 bits (79), Expect = 1.0
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +2
Query: 338 KNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISHFHLDHCGAL 490
K +M+DCG G++D+ + + +T+ ID VI++H DHC L
Sbjct: 27 KVVMIDCGSDRGFDDDLITSGRALLRNLIGVTNLIDTVILTHHDGDHCNQL 77
>UniRef50_A3ERL5 Cluster: Putative hydrolase of the
metallo-beta-lactamase superfamily; n=1; Leptospirillum
sp. Group II UBA|Rep: Putative hydrolase of the
metallo-beta-lactamase superfamily - Leptospirillum sp.
Group II UBA
Length = 562
Score = 35.9 bits (79), Expect = 1.0
Identities = 20/82 (24%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Frame = +2
Query: 263 PDIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYND----ERRFPDFSYIVPEGPI 430
P ++I PLG ++G + +++DCG+ +D + PD +++
Sbjct: 13 PWVRIIPLGGIGEIGMNMTAYETPDGIVVVDCGVLFPEDDLLGIDLIIPDMTFLKEN--- 69
Query: 431 TSQIDCVIISHFHLDHCGALPY 496
+++ + ++H H DH GA+PY
Sbjct: 70 RNRLLALFLTHGHEDHIGAIPY 91
>UniRef50_Q331V3 Cluster: Putative uncharacterized protein; n=1;
Clostridium phage c-st|Rep: Putative uncharacterized
protein - Clostridium botulinum C bacteriophage
Length = 231
Score = 35.9 bits (79), Expect = 1.0
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +2
Query: 431 TSQIDCVIISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLED 577
T +++C+ + H H DH +P + G+ G IY T T I L D
Sbjct: 65 TEELECIFLFHAHADHSALIPALINK-GFKGKIYCTRATAEICYHLFMD 112
>UniRef50_A4YGQ9 Cluster: Beta-lactamase domain protein; n=3;
Sulfolobaceae|Rep: Beta-lactamase domain protein -
Metallosphaera sedula DSM 5348
Length = 259
Score = 35.9 bits (79), Expect = 1.0
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 6/52 (11%)
Frame = +2
Query: 413 VPEGPITSQIDCVIISHFHLDHCGALP-----YMSEMIGYTG-PIYMTHPTK 550
V + ++D V+++H H+DH GAL Y S++I Y G Y+ PTK
Sbjct: 40 VMDASFLDKLDYVVVTHLHIDHVGALSEIVQRYKSKVIVYQGYSKYLRDPTK 91
>UniRef50_Q45493 Cluster: UPF0036 protein ykqC; n=110; Bacilli|Rep:
UPF0036 protein ykqC - Bacillus subtilis
Length = 555
Score = 35.9 bits (79), Expect = 1.0
Identities = 20/87 (22%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Frame = +2
Query: 284 LGAGQDVGRSCILLTMGGKNIMLDCGMHMGYND----ERRFPDFSYIVPEGPITSQIDCV 451
LG ++G++ + + +++D G+ ++ + PD++Y+V +I +
Sbjct: 14 LGGLGEIGKNTYAVQFQDEIVLIDAGIKFPEDELLGIDYVIPDYTYLVKN---EDKIKGL 70
Query: 452 IISHFHLDHCGALPYMSEMIGYTGPIY 532
I+H H DH G +PY+ + P+Y
Sbjct: 71 FITHGHEDHIGGIPYLLRQVNI--PVY 95
>UniRef50_UPI00015B9771 Cluster: UPI00015B9771 related cluster; n=1;
unknown|Rep: UPI00015B9771 UniRef100 entry - unknown
Length = 416
Score = 35.5 bits (78), Expect = 1.4
Identities = 24/89 (26%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Frame = +2
Query: 296 QDVGRSCILLTMGGKNIMLDCGMHM--GYNDERRFPDFSYIVPEGPITSQIDCVIISHFH 469
+++G +C+ L GG ++LD G+ + +D R P + + G + + +++SH H
Sbjct: 10 REIGGTCVELEHGGARLLLDLGLPLDGDPDDTSRHPAINGLTGGGDLLA----LVLSHGH 65
Query: 470 LDHCGALPYMSEMIGYTGPIYMTHPTKAI 556
DH G +S + G P+ M T I
Sbjct: 66 RDHVG----LSHLAGPDLPVAMGTATLRI 90
>UniRef50_Q2Q0D8 Cluster: Putative mRNA processing factor; n=1;
uncultured organism HF10_3D09|Rep: Putative mRNA
processing factor - uncultured organism HF10_3D09
Length = 437
Score = 35.5 bits (78), Expect = 1.4
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 1/104 (0%)
Frame = +2
Query: 284 LGAGQDVGRSCILLTMGGKN-IMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIIS 460
LG G +VG I+L N ++LD G+ R+P+ E P + II+
Sbjct: 26 LGGGNEVGNVGIVLEDPTSNRLLLDYGI--APTKPPRYPN------EAP---HVLNAIIT 74
Query: 461 HFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPILLEDMRKVA 592
H H+DH G +P+++ + ++ T T AI+ ++ D KV+
Sbjct: 75 HSHIDHLGMVPWLAS--NHNTTLHATDLTAAISEMMWYDCHKVS 116
>UniRef50_A0VNF9 Cluster: Beta-lactamase domain protein; n=7;
Rhodobacterales|Rep: Beta-lactamase domain protein -
Dinoroseobacter shibae DFL 12
Length = 266
Score = 35.5 bits (78), Expect = 1.4
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Frame = +2
Query: 320 LLTMGGKNIMLDCGMHMGYNDERRFP----DFSYIVPEGPITSQIDCVIISHFHLDHCGA 487
LL G + I++D G M + R P + P G I+ VI++H H DH G
Sbjct: 42 LLRRGPETILVDTGYDMDEGERRARPIRTDPAEALAPLGVSPDSIEQVIVTHLHYDHAGG 101
Query: 488 L 490
L
Sbjct: 102 L 102
>UniRef50_Q387M8 Cluster: Cleavage and polyadenylation specificity
factor, putative; n=2; Trypanosoma|Rep: Cleavage and
polyadenylation specificity factor, putative -
Trypanosoma brucei
Length = 818
Score = 35.5 bits (78), Expect = 1.4
Identities = 21/64 (32%), Positives = 32/64 (50%)
Frame = +2
Query: 320 LLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISHFHLDHCGALPYM 499
LL + G I++DCG + G+ + SY+ P + V+ S L CGALP++
Sbjct: 32 LLEIDGVRILMDCGWNDGF-------ETSYLDALLPYLGDLHAVLFSTPELSSCGALPFV 84
Query: 500 SEMI 511
E I
Sbjct: 85 MEHI 88
>UniRef50_UPI0000164CFE Cluster: hypothetical protein DR_2417m; n=1;
Deinococcus radiodurans R1|Rep: hypothetical protein
DR_2417m - Deinococcus radiodurans R1
Length = 579
Score = 35.1 bits (77), Expect = 1.8
Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Frame = +2
Query: 263 PDIKITPLGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRF----PDFSYIVPEGPI 430
P +++ PLG ++G++ + G + +++D G+ + P Y++
Sbjct: 17 PTLEVIPLGGMGEIGKNITVFRYGDEIVVVDGGLAFPKAHQMGIDLIVPRIDYLLEH--- 73
Query: 431 TSQIDCVIISHFHLDHCGALPYM 499
+I I++H H DH G LPY+
Sbjct: 74 QDKIKGWILTHGHEDHIGGLPYI 96
>UniRef50_Q9K890 Cluster: BH3116 protein; n=19; Bacillaceae|Rep:
BH3116 protein - Bacillus halodurans
Length = 305
Score = 35.1 bits (77), Expect = 1.8
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +2
Query: 302 VGRSCILLTMGGKNIMLD--CGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISHFHLD 475
+G S LL M G NI+ D ++G++ P S + E P +ID V+ISH H D
Sbjct: 61 IGHSSFLLQMKGLNILTDPVFAKYLGFSKRLISPGLS--IDELP---EIDIVVISHGHYD 115
Query: 476 H 478
H
Sbjct: 116 H 116
>UniRef50_Q12M67 Cluster: Putative uncharacterized protein
precursor; n=1; Shewanella denitrificans OS217|Rep:
Putative uncharacterized protein precursor - Shewanella
denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013)
Length = 303
Score = 35.1 bits (77), Expect = 1.8
Identities = 28/109 (25%), Positives = 47/109 (43%), Gaps = 4/109 (3%)
Frame = +2
Query: 284 LGAGQDVGRSCILLTMGGKNIMLDCGMHMGYNDERRFPD---FSYIVPEGPITSQIDCVI 454
LG +G +L+ K I+ D + + P+ F + E P + ID +
Sbjct: 50 LGTAHYLGNEGVLVVGTQKKILFDPMFNKNFQRFSLVPESLKFKILENEAPFEN-IDVIF 108
Query: 455 ISHFHLDHCGALPYMSEMIGYTGPIYMTHPTKAIAPI-LLEDMRKVAVE 598
ISH H DH A + + Y + + PT+ I + LL D +K+ +
Sbjct: 109 ISHSHADHFDAKEVSAYLHKYQN-VQLIAPTQVIEKLKLLGDDKKITTQ 156
>UniRef50_Q0LFP8 Cluster: Beta-lactamase-like; n=1; Herpetosiphon
aurantiacus ATCC 23779|Rep: Beta-lactamase-like -
Herpetosiphon aurantiacus ATCC 23779
Length = 216
Score = 35.1 bits (77), Expect = 1.8
Identities = 20/68 (29%), Positives = 33/68 (48%)
Frame = +2
Query: 311 SCILLTMGGKNIMLDCGMHMGYNDERRFPDFSYIVPEGPITSQIDCVIISHFHLDHCGAL 490
+C LL +++D GM ++ F + G SQI +I++H+H DH G
Sbjct: 24 NCYLLKADHGWVVIDTGMRYAQAEQTWQATFEQL---GIAWSQIKQIIVTHYHPDHYGMA 80
Query: 491 PYMSEMIG 514
+M+E G
Sbjct: 81 GWMAERSG 88
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 751,397,809
Number of Sequences: 1657284
Number of extensions: 15797655
Number of successful extensions: 33443
Number of sequences better than 10.0: 332
Number of HSP's better than 10.0 without gapping: 32223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33194
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 59677054775
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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