Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc8c05
(313 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.25
SB_36850| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.44
SB_12462| Best HMM Match : Kinesin (HMM E-Value=0) 29 0.58
SB_45518| Best HMM Match : Prothymosin (HMM E-Value=0.9) 29 0.77
SB_40598| Best HMM Match : Stap_Strp_toxin (HMM E-Value=2.7) 29 0.77
SB_1847| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.8
SB_33977| Best HMM Match : CUE (HMM E-Value=0.52) 27 2.3
SB_3594| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.3
SB_55200| Best HMM Match : E-MAP-115 (HMM E-Value=0.85) 27 3.1
SB_53232| Best HMM Match : OAR (HMM E-Value=0.92) 27 3.1
SB_49614| Best HMM Match : E-MAP-115 (HMM E-Value=0.85) 27 3.1
SB_40579| Best HMM Match : E-MAP-115 (HMM E-Value=0.85) 27 3.1
SB_31788| Best HMM Match : Kazal_1 (HMM E-Value=0) 27 3.1
SB_51620| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.1
SB_2123| Best HMM Match : PKD_channel (HMM E-Value=0) 27 3.1
SB_29377| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.1
SB_36161| Best HMM Match : SecIII_SopE_N (HMM E-Value=4.1) 27 4.1
SB_48996| Best HMM Match : ASC (HMM E-Value=7.1e-08) 26 5.4
SB_48994| Best HMM Match : ASC (HMM E-Value=1.3e-11) 26 5.4
SB_25197| Best HMM Match : TatC (HMM E-Value=1.8) 26 5.4
SB_55246| Best HMM Match : DUF1168 (HMM E-Value=0.32) 26 7.2
SB_26781| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.2
SB_34| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.2
SB_57868| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.5
SB_50356| Best HMM Match : PaaX (HMM E-Value=3.6) 25 9.5
SB_48968| Best HMM Match : Dehydrin (HMM E-Value=0.99) 25 9.5
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 30.7 bits (66), Expect = 0.25
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3
Query: 90 KAHRNGIKKPRKTRHESTLGM 152
K HRNGIKKPR R+ S G+
Sbjct: 175 KWHRNGIKKPRTNRYPSLKGV 195
>SB_36850| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1008
Score = 29.9 bits (64), Expect = 0.44
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +3
Query: 42 IKMAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLGMDPKFLRNQR 179
IK N HNQ + + KK RK RH DP+ L+ ++
Sbjct: 123 IKQTSDNNKPQHNQKNTSKK---KKKRKDRHRKKQDQDPEPLKEKK 165
>SB_12462| Best HMM Match : Kinesin (HMM E-Value=0)
Length = 803
Score = 29.5 bits (63), Expect = 0.58
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +1
Query: 10 LSSESKWIENASKWQSQRIIQIITKTAKLTEMVSKSQGRPGTNPP 144
+ +E W E A KW + +ITKT+ T V PG N P
Sbjct: 634 IKAECTWDEEAGKWNMPEL--VITKTSLPTPGVMPGGLTPGGNTP 676
>SB_45518| Best HMM Match : Prothymosin (HMM E-Value=0.9)
Length = 413
Score = 29.1 bits (62), Expect = 0.77
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +3
Query: 45 KMAKSKNHTNHNQNRKAHRNGIKKPRKTRHEST 143
K AKSK NH ++ K R KK ++T +ST
Sbjct: 145 KNAKSKIKRNHGEDNKPKRISTKKRKRTDKDST 177
>SB_40598| Best HMM Match : Stap_Strp_toxin (HMM E-Value=2.7)
Length = 192
Score = 29.1 bits (62), Expect = 0.77
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +3
Query: 51 AKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLGMD 155
+K+ N TN NQ K P+KT ++T+ D
Sbjct: 153 SKNNNQTNRNQGNTGITENTKSPKKTNIDATVPSD 187
>SB_1847| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 27.9 bits (59), Expect = 1.8
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +1
Query: 115 SQGRPGTNPPLAWIQN 162
S GRPG N P+AW+ +
Sbjct: 31 SPGRPGPNAPIAWVND 46
>SB_33977| Best HMM Match : CUE (HMM E-Value=0.52)
Length = 1183
Score = 27.5 bits (58), Expect = 2.3
Identities = 9/36 (25%), Positives = 18/36 (50%)
Frame = +1
Query: 34 ENASKWQSQRIIQIITKTAKLTEMVSKSQGRPGTNP 141
E +W +R++ + + KL E + ++GR P
Sbjct: 1031 EKYREWHMKRVLPLFVQDTKLREKIENAEGRTSGGP 1066
>SB_3594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 162
Score = 27.5 bits (58), Expect = 2.3
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = +3
Query: 42 IKMAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLGMDPKFLR 170
I + + H +HN +R + N IK + RH T F R
Sbjct: 115 IGVVRHVRHDDHNLSRSHNNNAIKSRNQNRHFVTQSQQHVFTR 157
>SB_55200| Best HMM Match : E-MAP-115 (HMM E-Value=0.85)
Length = 929
Score = 27.1 bits (57), Expect = 3.1
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 9/70 (12%)
Frame = +3
Query: 36 KRIKMAKSKNHTNHNQN---------RKAHRNGIKKPRKTRHESTLGMDPKFLRNQRFCK 188
K IK AK K++ N+N RKA R K +TR E K + QR
Sbjct: 16 KEIKRAKDKDYYEKNRNKKIAQVIERRKARREETKGKSRTRTEIKKAASKKRRKEQRATA 75
Query: 189 KGNLKPAKQL 218
+ L+ +Q+
Sbjct: 76 REELERKRQI 85
>SB_53232| Best HMM Match : OAR (HMM E-Value=0.92)
Length = 806
Score = 27.1 bits (57), Expect = 3.1
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 9/70 (12%)
Frame = +3
Query: 36 KRIKMAKSKNHTNHNQN---------RKAHRNGIKKPRKTRHESTLGMDPKFLRNQRFCK 188
K IK AK K++ N+N RKA R K +TR E K + QR
Sbjct: 38 KEIKRAKDKDYYEKNRNKKIAQVIERRKARREETKGKSRTRTEIKKAASKKRRKEQRATA 97
Query: 189 KGNLKPAKQL 218
+ L+ +Q+
Sbjct: 98 REELERKRQI 107
>SB_49614| Best HMM Match : E-MAP-115 (HMM E-Value=0.85)
Length = 838
Score = 27.1 bits (57), Expect = 3.1
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 9/70 (12%)
Frame = +3
Query: 36 KRIKMAKSKNHTNHNQN---------RKAHRNGIKKPRKTRHESTLGMDPKFLRNQRFCK 188
K IK AK K++ N+N RKA R K +TR E K + QR
Sbjct: 16 KEIKRAKDKDYYEKNRNKKIAQVIERRKARREETKGKSRTRTEIKKAASKKRRKEQRATA 75
Query: 189 KGNLKPAKQL 218
+ L+ +Q+
Sbjct: 76 REELERKRQI 85
>SB_40579| Best HMM Match : E-MAP-115 (HMM E-Value=0.85)
Length = 929
Score = 27.1 bits (57), Expect = 3.1
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 9/70 (12%)
Frame = +3
Query: 36 KRIKMAKSKNHTNHNQN---------RKAHRNGIKKPRKTRHESTLGMDPKFLRNQRFCK 188
K IK AK K++ N+N RKA R K +TR E K + QR
Sbjct: 16 KEIKRAKDKDYYEKNRNKKIAQVIERRKARREETKGKSRTRTEIKKAASKKRRKEQRATA 75
Query: 189 KGNLKPAKQL 218
+ L+ +Q+
Sbjct: 76 REELERKRQI 85
>SB_31788| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 352
Score = 27.1 bits (57), Expect = 3.1
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 36 KRIKMAKSKNHTNHNQNRKAHRNGIKKPRKTRHEST 143
K IK AK N+N RK G K+P++ R ++T
Sbjct: 86 KPIKKAKVSK-VNNNGRRKEKNRGQKRPKRCRPDTT 120
>SB_51620| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 451
Score = 27.1 bits (57), Expect = 3.1
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +3
Query: 48 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHE 137
+ S +HN + R GIK+PR+++ E
Sbjct: 342 LTTSPTMISHNNQQNDSRRGIKRPRRSQEE 371
>SB_2123| Best HMM Match : PKD_channel (HMM E-Value=0)
Length = 672
Score = 27.1 bits (57), Expect = 3.1
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -1
Query: 313 FFFYFLCVYLLITNVHFLAFASR 245
FF F+ V L T + FLAF SR
Sbjct: 328 FFIVFVAVLLAFTQLGFLAFGSR 350
>SB_29377| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 548
Score = 26.6 bits (56), Expect = 4.1
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 217 SRGRLREKLPEKQRPRNE 270
SRGR EK PEKQR +++
Sbjct: 267 SRGRSAEKSPEKQRDKSD 284
>SB_36161| Best HMM Match : SecIII_SopE_N (HMM E-Value=4.1)
Length = 535
Score = 26.6 bits (56), Expect = 4.1
Identities = 14/60 (23%), Positives = 23/60 (38%)
Frame = +3
Query: 39 RIKMAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLGMDPKFLRNQRFCKKGNLKPAKQL 218
+ K K K +H N NG+ P+K + + + K ++ C N K L
Sbjct: 90 KTKFKKIKKEGDHGNNNTEKPNGVSSPKKKKKKHHHKHEEKHFTDRDHCILDNPKEKTHL 149
>SB_48996| Best HMM Match : ASC (HMM E-Value=7.1e-08)
Length = 294
Score = 26.2 bits (55), Expect = 5.4
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -2
Query: 90 CGFGYDLYDSLT 55
CGFGY LY S+T
Sbjct: 41 CGFGYQLYKSIT 52
>SB_48994| Best HMM Match : ASC (HMM E-Value=1.3e-11)
Length = 538
Score = 26.2 bits (55), Expect = 5.4
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -2
Query: 90 CGFGYDLYDSLT 55
CGFGY LY S+T
Sbjct: 41 CGFGYQLYKSIT 52
>SB_25197| Best HMM Match : TatC (HMM E-Value=1.8)
Length = 622
Score = 26.2 bits (55), Expect = 5.4
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +3
Query: 42 IKMAKSKNHTNHNQNRKAH-RNGIKKPRKTRHESTL 146
I KSK+H NHN+ + H + I K H+ T+
Sbjct: 572 IVYCKSKHHANHNKGCERHFEDDINKCGCRNHDHTI 607
>SB_55246| Best HMM Match : DUF1168 (HMM E-Value=0.32)
Length = 943
Score = 25.8 bits (54), Expect = 7.2
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 96 HRNGIKKPRKTRHESTLGMDPKFLRNQR 179
H+N + PR +R T P F RNQR
Sbjct: 373 HKNIRRIPRASRGSITQARGPDFARNQR 400
>SB_26781| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 707
Score = 25.8 bits (54), Expect = 7.2
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 9/70 (12%)
Frame = +3
Query: 36 KRIKMAKSKNHTNHNQN---------RKAHRNGIKKPRKTRHESTLGMDPKFLRNQRFCK 188
K IK K K++ N+N RKA R K +TR E K + QR
Sbjct: 16 KEIKRVKDKDYYEKNRNKKIAQVIERRKARREETKGKSRTRTEIKKAASKKRRKEQRATA 75
Query: 189 KGNLKPAKQL 218
+ L+ +Q+
Sbjct: 76 REELETKRQI 85
>SB_34| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 122
Score = 25.8 bits (54), Expect = 7.2
Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = +3
Query: 60 KNHTN-HNQNRKAHRNGIKKPRKTRHESTLGMDPKFLRNQR 179
+NH HN+NRK N I+K R+ D + R
Sbjct: 66 RNHKEPHNRNRKEPGNRIRKVEHNRNRKDYSRDERIHNRSR 106
>SB_57868| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 281
Score = 25.4 bits (53), Expect = 9.5
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 2 LLFCPLNLSGLKTHQNGKVKE 64
L FC ++ SG K H+ K KE
Sbjct: 10 LAFCAVSTSGAKKHKKSKEKE 30
>SB_50356| Best HMM Match : PaaX (HMM E-Value=3.6)
Length = 210
Score = 25.4 bits (53), Expect = 9.5
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +3
Query: 99 RNGIKKPRKTRHESTLGMDPKFLR 170
R+GIKK K RH ST G F +
Sbjct: 27 RSGIKKLTKARHGSTQGRLDSFFK 50
>SB_48968| Best HMM Match : Dehydrin (HMM E-Value=0.99)
Length = 355
Score = 25.4 bits (53), Expect = 9.5
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 9/70 (12%)
Frame = +3
Query: 36 KRIKMAKSKNHTNHNQN---------RKAHRNGIKKPRKTRHESTLGMDPKFLRNQRFCK 188
K IK K K++ N+N RKA R K +TR E K + QR
Sbjct: 16 KEIKRTKDKDYYEKNRNKKIAQVIERRKARREETKGKSRTRTEIKKAASKKRRKEQRATA 75
Query: 189 KGNLKPAKQL 218
+ L+ +Q+
Sbjct: 76 REELERKRQI 85
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,084,088
Number of Sequences: 59808
Number of extensions: 168481
Number of successful extensions: 560
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 525
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 558
length of database: 16,821,457
effective HSP length: 72
effective length of database: 12,515,281
effective search space used: 387973711
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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