Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc8c04
(694 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79755-6|CAB02104.1| 192|Caenorhabditis elegans Hypothetical pr... 113 1e-25
AF169201-2|AAF01679.1| 192|Caenorhabditis elegans CPN-1 protein. 113 1e-25
AF040641-1|AAB94947.2| 203|Caenorhabditis elegans Calponin prot... 72 5e-13
AF039711-7|AAB96713.3| 154|Caenorhabditis elegans Calponin prot... 61 8e-10
U97013-5|AAB52338.1| 142|Caenorhabditis elegans Calponin protei... 60 1e-09
U64856-6|AAB04989.1| 406|Caenorhabditis elegans Hypothetical pr... 37 0.016
U64856-5|AAT81185.1| 301|Caenorhabditis elegans Hypothetical pr... 31 0.59
U04712-3|AAA81903.1| 357|Caenorhabditis elegans unc-87 protein. 31 0.78
U04712-2|AAA81902.1| 565|Caenorhabditis elegans unc-87 protein. 31 0.78
U04712-1|AAA81901.1| 374|Caenorhabditis elegans unc-87 protein. 31 0.78
U04711-2|AAA81900.1| 357|Caenorhabditis elegans unc-87 protein. 31 0.78
U04711-1|AAA81899.1| 374|Caenorhabditis elegans unc-87 protein. 31 0.78
AF106590-6|AAT68897.1| 544|Caenorhabditis elegans Uncoordinated... 31 0.78
AF106590-5|AAC78234.1| 565|Caenorhabditis elegans Uncoordinated... 31 0.78
AF106590-4|AAK68303.1| 374|Caenorhabditis elegans Uncoordinated... 31 0.78
U28734-1|AAB52603.2| 397|Caenorhabditis elegans Hypothetical pr... 30 1.4
AC084153-10|AAK84591.1| 184|Caenorhabditis elegans Hypothetical... 28 5.5
AF016657-1|AAB93653.1| 361|Caenorhabditis elegans Hypothetical ... 27 9.6
>Z79755-6|CAB02104.1| 192|Caenorhabditis elegans Hypothetical
protein F43G9.9 protein.
Length = 192
Score = 113 bits (271), Expect = 1e-25
Identities = 57/103 (55%), Positives = 75/103 (72%), Gaps = 1/103 (0%)
Frame = +2
Query: 5 MENINAFLEAARQLGVPAQETFQTVDLWERQNLNSVVICLQSLGRKAG-TYGKPSIGPKE 181
MENI+ FL+ A + V E FQTVDL+E Q+ N+V+ICL SL RK+ +G+ +GPKE
Sbjct: 91 MENISFFLKFAEEY-VQKSELFQTVDLYEGQDPNAVLICLASLARKSEKNFGRSGLGPKE 149
Query: 182 AEKNVRNFSEEQLRAGQGVISLQYGSNKGANQSGINFGNTRHM 310
A+ + R +++EQL+AG VI LQ GSNKGA SG+N GNTRHM
Sbjct: 150 AQGDRREWTDEQLKAGHNVIGLQMGSNKGATASGLNMGNTRHM 192
>AF169201-2|AAF01679.1| 192|Caenorhabditis elegans CPN-1 protein.
Length = 192
Score = 113 bits (271), Expect = 1e-25
Identities = 57/103 (55%), Positives = 75/103 (72%), Gaps = 1/103 (0%)
Frame = +2
Query: 5 MENINAFLEAARQLGVPAQETFQTVDLWERQNLNSVVICLQSLGRKAG-TYGKPSIGPKE 181
MENI+ FL+ A + V E FQTVDL+E Q+ N+V+ICL SL RK+ +G+ +GPKE
Sbjct: 91 MENISFFLKFAEEY-VQKSELFQTVDLYEGQDPNAVLICLASLARKSEKNFGRSGLGPKE 149
Query: 182 AEKNVRNFSEEQLRAGQGVISLQYGSNKGANQSGINFGNTRHM 310
A+ + R +++EQL+AG VI LQ GSNKGA SG+N GNTRHM
Sbjct: 150 AQGDRREWTDEQLKAGHNVIGLQMGSNKGATASGLNMGNTRHM 192
>AF040641-1|AAB94947.2| 203|Caenorhabditis elegans Calponin protein
2 protein.
Length = 203
Score = 71.7 bits (168), Expect = 5e-13
Identities = 42/99 (42%), Positives = 58/99 (58%), Gaps = 4/99 (4%)
Frame = +2
Query: 5 MENINAFLEAARQLGVPAQETFQTVDLWERQNLNSVVICLQSLGRKAGTYGK----PSIG 172
MENI+ FL AA+Q GV FQTVDL+E + V+ CL+ L A + P+
Sbjct: 91 MENISNFLAAAKQFGVMEISCFQTVDLYENKQCYKVIECLRLLAAVAQSRSSHLEHPAWV 150
Query: 173 PKEAEKNVRNFSEEQLRAGQGVISLQYGSNKGANQSGIN 289
K A+ + R F E +R G+ VI LQYG+NK A+Q G++
Sbjct: 151 VKLAQSSPRQFPEAVMRRGEMVIPLQYGTNKCASQKGMS 189
>AF039711-7|AAB96713.3| 154|Caenorhabditis elegans Calponin protein
4 protein.
Length = 154
Score = 60.9 bits (141), Expect = 8e-10
Identities = 32/64 (50%), Positives = 42/64 (65%)
Frame = +2
Query: 2 CMENINAFLEAARQLGVPAQETFQTVDLWERQNLNSVVICLQSLGRKAGTYGKPSIGPKE 181
C+ENIN F AAR LGV +ETFQ+VDL++ ++L SV + LQSL RK G PK+
Sbjct: 88 CLENINQFSTAARSLGVKDEETFQSVDLFDGRDLFSVTVTLQSLARKVEKLG--ITPPKQ 145
Query: 182 AEKN 193
K+
Sbjct: 146 VSKD 149
>U97013-5|AAB52338.1| 142|Caenorhabditis elegans Calponin protein 3
protein.
Length = 142
Score = 60.1 bits (139), Expect = 1e-09
Identities = 30/53 (56%), Positives = 39/53 (73%)
Frame = +2
Query: 2 CMENINAFLEAARQLGVPAQETFQTVDLWERQNLNSVVICLQSLGRKAGTYGK 160
CMENINAF+E A++ GVP +ETFQ+V+L E ++L SV + L SLGR GK
Sbjct: 85 CMENINAFVEFAKKQGVPNEETFQSVELVEGRDLFSVCVTLLSLGRVLQKAGK 137
>U64856-6|AAB04989.1| 406|Caenorhabditis elegans Hypothetical
protein T25F10.6a protein.
Length = 406
Score = 36.7 bits (81), Expect = 0.016
Identities = 29/75 (38%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Frame = +2
Query: 89 ERQNLNSVVICLQSLGRK-AGTYGKPSIGPKEAEKNVRNFSEEQLRAGQGVISLQYGSNK 265
E+ + ++ LQS K A G IG +VR + +Q R QG I LQ G+NK
Sbjct: 192 EKARASDGIVPLQSGTNKLASQAGMTGIGMPRIV-DVRR-TNDQDRDSQGFIHLQMGTNK 249
Query: 266 GANQSGI-NFGNTRH 307
ANQ+G+ FG RH
Sbjct: 250 FANQAGMTGFGMPRH 264
Score = 31.9 bits (69), Expect = 0.45
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +2
Query: 209 EEQLRAGQGVISLQYGSNKGANQSGI 286
EE+ RA G++ LQ G+NK A+Q+G+
Sbjct: 191 EEKARASDGIVPLQSGTNKLASQAGM 216
Score = 31.5 bits (68), Expect = 0.59
Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Frame = +2
Query: 92 RQNLNSVVICLQSLGRKAGTY--GKPSIGPKEAEKNVRNFSEEQLRAGQGVISLQYGSNK 265
RQ +N QS+ RK Y GKPS ++E+L +G+I +Q GSNK
Sbjct: 62 RQQVNFTPSIPQSVLRKQQNYSSGKPST----------IHTKEKLMRSEGIIPIQAGSNK 111
Query: 266 GANQSGI-NFGNTR 304
A+Q G+ FG R
Sbjct: 112 YASQKGMTGFGVPR 125
>U64856-5|AAT81185.1| 301|Caenorhabditis elegans Hypothetical
protein T25F10.6b protein.
Length = 301
Score = 31.5 bits (68), Expect = 0.59
Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Frame = +2
Query: 92 RQNLNSVVICLQSLGRKAGTY--GKPSIGPKEAEKNVRNFSEEQLRAGQGVISLQYGSNK 265
RQ +N QS+ RK Y GKPS ++E+L +G+I +Q GSNK
Sbjct: 62 RQQVNFTPSIPQSVLRKQQNYSSGKPST----------IHTKEKLMRSEGIIPIQAGSNK 111
Query: 266 GANQSGI-NFGNTR 304
A+Q G+ FG R
Sbjct: 112 YASQKGMTGFGVPR 125
>U04712-3|AAA81903.1| 357|Caenorhabditis elegans unc-87 protein.
Length = 357
Score = 31.1 bits (67), Expect = 0.78
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +2
Query: 209 EEQLRAGQGVISLQYGSNKGANQSGI-NFGNTR 304
EE++R +G++ LQ G+NK +Q G+ FG R
Sbjct: 120 EEKIRMSEGIVRLQAGTNKYDSQKGMTGFGTGR 152
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +2
Query: 215 QLRAGQGVISLQYGSNKGANQSG-INFGNTRH 307
Q R QG++ LQ G+N+ A+Q+G I FG R+
Sbjct: 256 QNRKSQGMVRLQSGTNRFASQAGMIGFGTCRN 287
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 188 KNVRNFSEEQLRAGQGVISLQYGSNKGANQSGI-NFGNTRH 307
K V ++ QLR G+I Q G NKG +Q + NFG R+
Sbjct: 12 KRVGRWTLAQLRQTDGIIPSQAGWNKGDSQKLMTNFGTPRN 52
>U04712-2|AAA81902.1| 565|Caenorhabditis elegans unc-87 protein.
Length = 565
Score = 31.1 bits (67), Expect = 0.78
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +2
Query: 209 EEQLRAGQGVISLQYGSNKGANQSGI-NFGNTR 304
EE++R +G++ LQ G+NK +Q G+ FG R
Sbjct: 328 EEKIRMSEGIVRLQAGTNKYDSQKGMTGFGTGR 360
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +2
Query: 215 QLRAGQGVISLQYGSNKGANQSG-INFGNTRH 307
Q R QG++ LQ G+N+ A+Q+G I FG R+
Sbjct: 464 QNRKSQGMVRLQSGTNRFASQAGMIGFGTCRN 495
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 188 KNVRNFSEEQLRAGQGVISLQYGSNKGANQSGI-NFGNTRH 307
K V ++ QLR G+I Q G NKG +Q + NFG R+
Sbjct: 220 KRVGRWTLAQLRQTDGIIPSQAGWNKGDSQKLMTNFGTPRN 260
>U04712-1|AAA81901.1| 374|Caenorhabditis elegans unc-87 protein.
Length = 374
Score = 31.1 bits (67), Expect = 0.78
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +2
Query: 209 EEQLRAGQGVISLQYGSNKGANQSGI-NFGNTR 304
EE++R +G++ LQ G+NK +Q G+ FG R
Sbjct: 137 EEKIRMSEGIVRLQAGTNKYDSQKGMTGFGTGR 169
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +2
Query: 215 QLRAGQGVISLQYGSNKGANQSG-INFGNTRH 307
Q R QG++ LQ G+N+ A+Q+G I FG R+
Sbjct: 273 QNRKSQGMVRLQSGTNRFASQAGMIGFGTCRN 304
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 188 KNVRNFSEEQLRAGQGVISLQYGSNKGANQSGI-NFGNTRH 307
K V ++ QLR G+I Q G NKG +Q + NFG R+
Sbjct: 29 KRVGRWTLAQLRQTDGIIPSQAGWNKGDSQKLMTNFGTPRN 69
>U04711-2|AAA81900.1| 357|Caenorhabditis elegans unc-87 protein.
Length = 357
Score = 31.1 bits (67), Expect = 0.78
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +2
Query: 209 EEQLRAGQGVISLQYGSNKGANQSGI-NFGNTR 304
EE++R +G++ LQ G+NK +Q G+ FG R
Sbjct: 120 EEKIRMSEGIVRLQAGTNKYDSQKGMTGFGTGR 152
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +2
Query: 215 QLRAGQGVISLQYGSNKGANQSG-INFGNTRH 307
Q R QG++ LQ G+N+ A+Q+G I FG R+
Sbjct: 256 QNRKSQGMVRLQSGTNRFASQAGMIGFGTCRN 287
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 188 KNVRNFSEEQLRAGQGVISLQYGSNKGANQSGI-NFGNTRH 307
K V ++ QLR G+I Q G NKG +Q + NFG R+
Sbjct: 12 KRVGRWTLAQLRQTDGIIPSQAGWNKGDSQKLMTNFGTPRN 52
>U04711-1|AAA81899.1| 374|Caenorhabditis elegans unc-87 protein.
Length = 374
Score = 31.1 bits (67), Expect = 0.78
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +2
Query: 209 EEQLRAGQGVISLQYGSNKGANQSGI-NFGNTR 304
EE++R +G++ LQ G+NK +Q G+ FG R
Sbjct: 137 EEKIRMSEGIVRLQAGTNKYDSQKGMTGFGTGR 169
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +2
Query: 215 QLRAGQGVISLQYGSNKGANQSG-INFGNTRH 307
Q R QG++ LQ G+N+ A+Q+G I FG R+
Sbjct: 273 QNRKSQGMVRLQSGTNRFASQAGMIGFGTCRN 304
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 188 KNVRNFSEEQLRAGQGVISLQYGSNKGANQSGI-NFGNTRH 307
K V ++ QLR G+I Q G NKG +Q + NFG R+
Sbjct: 29 KRVGRWTLAQLRQTDGIIPSQAGWNKGDSQKLMTNFGTPRN 69
>AF106590-6|AAT68897.1| 544|Caenorhabditis elegans Uncoordinated
protein 87, isoform c protein.
Length = 544
Score = 31.1 bits (67), Expect = 0.78
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +2
Query: 209 EEQLRAGQGVISLQYGSNKGANQSGI-NFGNTR 304
EE++R +G++ LQ G+NK +Q G+ FG R
Sbjct: 307 EEKIRMSEGIVRLQAGTNKYDSQKGMTGFGTGR 339
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +2
Query: 215 QLRAGQGVISLQYGSNKGANQSG-INFGNTRH 307
Q R QG++ LQ G+N+ A+Q+G I FG R+
Sbjct: 443 QNRKSQGMVRLQSGTNRFASQAGMIGFGTCRN 474
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 188 KNVRNFSEEQLRAGQGVISLQYGSNKGANQSGI-NFGNTRH 307
K V ++ QLR G+I Q G NKG +Q + NFG R+
Sbjct: 199 KRVGRWTLAQLRQTDGIIPSQAGWNKGDSQKLMTNFGTPRN 239
>AF106590-5|AAC78234.1| 565|Caenorhabditis elegans Uncoordinated
protein 87, isoform a protein.
Length = 565
Score = 31.1 bits (67), Expect = 0.78
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +2
Query: 209 EEQLRAGQGVISLQYGSNKGANQSGI-NFGNTR 304
EE++R +G++ LQ G+NK +Q G+ FG R
Sbjct: 328 EEKIRMSEGIVRLQAGTNKYDSQKGMTGFGTGR 360
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +2
Query: 215 QLRAGQGVISLQYGSNKGANQSG-INFGNTRH 307
Q R QG++ LQ G+N+ A+Q+G I FG R+
Sbjct: 464 QNRKSQGMVRLQSGTNRFASQAGMIGFGTCRN 495
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 188 KNVRNFSEEQLRAGQGVISLQYGSNKGANQSGI-NFGNTRH 307
K V ++ QLR G+I Q G NKG +Q + NFG R+
Sbjct: 220 KRVGRWTLAQLRQTDGIIPSQAGWNKGDSQKLMTNFGTPRN 260
>AF106590-4|AAK68303.1| 374|Caenorhabditis elegans Uncoordinated
protein 87, isoform b protein.
Length = 374
Score = 31.1 bits (67), Expect = 0.78
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +2
Query: 209 EEQLRAGQGVISLQYGSNKGANQSGI-NFGNTR 304
EE++R +G++ LQ G+NK +Q G+ FG R
Sbjct: 137 EEKIRMSEGIVRLQAGTNKYDSQKGMTGFGTGR 169
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +2
Query: 215 QLRAGQGVISLQYGSNKGANQSG-INFGNTRH 307
Q R QG++ LQ G+N+ A+Q+G I FG R+
Sbjct: 273 QNRKSQGMVRLQSGTNRFASQAGMIGFGTCRN 304
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 188 KNVRNFSEEQLRAGQGVISLQYGSNKGANQSGI-NFGNTRH 307
K V ++ QLR G+I Q G NKG +Q + NFG R+
Sbjct: 29 KRVGRWTLAQLRQTDGIIPSQAGWNKGDSQKLMTNFGTPRN 69
>U28734-1|AAB52603.2| 397|Caenorhabditis elegans Hypothetical
protein C53C9.2 protein.
Length = 397
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +2
Query: 197 RNFSEEQLRAGQGVISLQYGSNKGANQSGI-NFGNTRH 307
++ EE + +G++ LQ G+NK A+Q G+ FG R+
Sbjct: 241 KDIEEELKQKSEGIVPLQSGTNKLASQRGMTGFGTPRN 278
>AC084153-10|AAK84591.1| 184|Caenorhabditis elegans Hypothetical
protein Y22D7AL.2 protein.
Length = 184
Score = 28.3 bits (60), Expect = 5.5
Identities = 24/66 (36%), Positives = 34/66 (51%)
Frame = -2
Query: 198 RTFFSASFGPIDGFP*VPAFLPSDCKQITTELRFCLSHRSTV*KVSCAGTPNCLAASRKA 19
RT + SF G P V A S + T LR +H++T +C GTPN AAS+
Sbjct: 88 RTHQTTSFTSNCGTPNVSA--ASKQPPLHTSLR---THQTTSFTSNC-GTPNVSAASKNN 141
Query: 18 LIFSMH 1
+F++H
Sbjct: 142 HLFTLH 147
>AF016657-1|AAB93653.1| 361|Caenorhabditis elegans Hypothetical
protein C16C4.7 protein.
Length = 361
Score = 27.5 bits (58), Expect = 9.6
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Frame = +2
Query: 305 HM*NCLNVHI*MACYKHARCF*VT---VLKFRRENFYILNNSHSLQKSLYLDSNNVGKND 475
H+ L HI C+ H + T K+R + + LN + K+LY NV KN
Sbjct: 20 HLLLSLKSHIRPFCFLHKQQKKKTSNETCKYRENSTFTLNARSNFSKTLYKYRENVPKNS 79
Query: 476 I 478
I
Sbjct: 80 I 80
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,559,891
Number of Sequences: 27780
Number of extensions: 328471
Number of successful extensions: 751
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 717
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 748
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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