Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc8c02
(712 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryo... 286 3e-76
UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryo... 279 5e-74
UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1; L... 217 2e-55
UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Scleroti... 216 4e-55
UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n... 203 3e-51
UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Ol... 195 8e-49
UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, pu... 191 1e-47
UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL... 186 5e-46
UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; E... 181 1e-44
UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1, pu... 180 2e-44
UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia b... 178 1e-43
UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephal... 175 7e-43
UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brug... 172 6e-42
UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; ... 164 2e-39
UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2; Cryptomo... 164 2e-39
UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trich... 150 4e-35
UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lambli... 137 3e-31
UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13; Euryar... 123 4e-27
UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2; Endopterygot... 118 2e-25
UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9; Archaea... 112 9e-24
UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;... 97 5e-19
UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2; Euryarc... 97 5e-19
UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3; Archaea... 94 3e-18
UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9; Euryarc... 89 8e-17
UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal ... 89 1e-16
UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiell... 87 4e-16
UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8; Archaea... 82 2e-14
UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4; Thermop... 80 5e-14
UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2; Thermoprotei... 80 6e-14
UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal ... 75 2e-12
UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974, w... 70 7e-11
UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1; Nanoarc... 67 5e-10
UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarc... 66 1e-09
UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular org... 51 3e-05
UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2; ... 44 0.003
UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium c... 44 0.004
UniRef50_A7QKL2 Cluster: Chromosome chr2 scaffold_113, whole gen... 42 0.015
UniRef50_Q6ZR89 Cluster: CDNA FLJ46551 fis, clone THYMU3038687; ... 38 0.32
UniRef50_Q9VDD2 Cluster: CG17299-PF, isoform F; n=18; Diptera|Re... 36 0.98
UniRef50_Q5NB71 Cluster: Putative uncharacterized protein P0431F... 36 1.3
UniRef50_A7SGS6 Cluster: Predicted protein; n=1; Nematostella ve... 36 1.3
UniRef50_UPI000058888F Cluster: PREDICTED: similar to ENSANGP000... 35 2.3
UniRef50_UPI000023E82F Cluster: hypothetical protein FG01599.1; ... 34 4.0
UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3; ... 34 4.0
UniRef50_UPI00015B4B32 Cluster: PREDICTED: hypothetical protein;... 33 5.2
UniRef50_A1FG00 Cluster: Putative uncharacterized protein; n=1; ... 33 5.2
UniRef50_Q7QNZ3 Cluster: GLP_149_9791_7437; n=2; Giardia lamblia... 33 6.9
UniRef50_A4RCN1 Cluster: Putative uncharacterized protein; n=2; ... 33 6.9
UniRef50_P04196 Cluster: Histidine-rich glycoprotein precursor; ... 33 6.9
UniRef50_UPI0000F2E6E2 Cluster: PREDICTED: hypothetical protein;... 33 9.2
UniRef50_A3UKR0 Cluster: Probable C-5 cytosine-specific DNA meth... 33 9.2
UniRef50_A1HES9 Cluster: Putative uncharacterized protein; n=1; ... 33 9.2
UniRef50_A0GGU8 Cluster: Putative uncharacterized protein; n=1; ... 33 9.2
UniRef50_Q2H7T6 Cluster: Putative uncharacterized protein; n=1; ... 33 9.2
>UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70;
Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens
(Human)
Length = 427
Score = 286 bits (702), Expect = 3e-76
Identities = 136/205 (66%), Positives = 156/205 (76%)
Frame = +2
Query: 98 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 277
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 278 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXX 457
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQ 119
Query: 458 XXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSD 637
++GH IE++PELPLVV DKV+ KTK+AV+ L++LKAW+D
Sbjct: 120 KRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWND 179
Query: 638 ILKVYKSQRLRAGKGKMRNRRRIQR 712
I KVY SQR+RAGKGKMRNRRRIQR
Sbjct: 180 IKKVYASQRMRAGKGKMRNRRRIQR 204
>UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96;
Eukaryota|Rep: 60S ribosomal protein L4 - Drosophila
melanogaster (Fruit fly)
Length = 401
Score = 279 bits (684), Expect = 5e-74
Identities = 134/207 (64%), Positives = 156/207 (75%)
Frame = +2
Query: 92 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKE 271
MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60
Query: 272 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 451
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 61 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNV 120
Query: 452 XXXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAW 631
Q++GH+I+ + E PLVV+D+VQ++ KTKQAVIFLRRLK W
Sbjct: 121 NQRRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIW 180
Query: 632 SDILKVYKSQRLRAGKGKMRNRRRIQR 712
+DI KVYKSQR RAG+G MR+RRRI R
Sbjct: 181 ADIQKVYKSQRFRAGRGTMRDRRRIAR 207
>UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1;
Leishmania major strain Friedlin|Rep: Ribosomal protein
L1a, putative - Leishmania major strain Friedlin
Length = 432
Score = 217 bits (531), Expect = 2e-55
Identities = 108/202 (53%), Positives = 132/202 (65%)
Frame = +2
Query: 107 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQT 286
ARP VSVYS S++V G PLP VF APIR D+V VH +M+KNSRQ Y V++ +G
Sbjct: 3 ARPSVSVYSASSDSVVGTC-PLPAVFTAPIRSDIVKFVHTNMAKNSRQAYAVNRLSGMNH 61
Query: 287 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXX 466
SA SWGTGRAVARIPR+ GGGT SG GAFGNMCRGGRMFAPTK +RRWH
Sbjct: 62 SAHSWGTGRAVARIPRISGGGTSTSGAGAFGNMCRGGRMFAPTKIFRRWHRKINLHQKRF 121
Query: 467 XXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILK 646
+RGH I +PE+PLVV D +Q KTK+A+ FL+ + A D+ +
Sbjct: 122 AVVSALAASSVPSLVMSRGHQIGNVPEVPLVVEDSIQGYEKTKEAMAFLKAIAAIDDVNR 181
Query: 647 VYKSQRLRAGKGKMRNRRRIQR 712
V S+ +RAG+GKMRNRR + R
Sbjct: 182 VNDSREIRAGRGKMRNRRYVAR 203
>UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2;
Sclerotiniaceae|Rep: 60S ribosomal protein L4 -
Sclerotinia sclerotiorum 1980
Length = 373
Score = 216 bits (528), Expect = 4e-55
Identities = 111/205 (54%), Positives = 131/205 (63%), Gaps = 3/205 (1%)
Frame = +2
Query: 107 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQT 286
+RP VSV S T G PLP VF +PIRPD+V VH M+KN RQPY VS++AGHQT
Sbjct: 3 SRPTVSVLSADG-TATGTTIPLPKVFTSPIRPDIVQTVHTGMAKNKRQPYAVSEKAGHQT 61
Query: 287 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXX 466
SAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPTK WR+WH
Sbjct: 62 SAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPTKVWRKWHQKINLGQKRF 121
Query: 467 XXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQE---INKTKQAVIFLRRLKAWSD 637
ARGH I ++ E+PLV+ +V E I +T A L+ + A D
Sbjct: 122 ATVSALAASGVPALLFARGHQISEVAEVPLVINSEVFEGAKIARTAAAAGLLKTVGALKD 181
Query: 638 ILKVYKSQRLRAGKGKMRNRRRIQR 712
+ KV S++LRAGKGK+R RR QR
Sbjct: 182 VEKVKDSRKLRAGKGKLRGRRHRQR 206
>UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n=4;
Cryptosporidium|Rep: 60S ribosomal protein-like,
putative - Cryptosporidium parvum Iowa II
Length = 394
Score = 203 bits (496), Expect = 3e-51
Identities = 104/205 (50%), Positives = 129/205 (62%), Gaps = 2/205 (0%)
Frame = +2
Query: 98 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 277
++ ARP+VSV+ T ++ PLP VF +P+R DLV V +MSKN RQ Y VS +AG
Sbjct: 1 MTFARPIVSVFPSNDSTKATSSIPLPTVFVSPLRHDLVRYVFTNMSKNKRQAYGVSTKAG 60
Query: 278 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXX 457
HQ SAESWGTGRAVARIPRV GT RSGQGAFGNMCRGG MF+P K +RR+H
Sbjct: 61 HQHSAESWGTGRAVARIPRVSASGTSRSGQGAFGNMCRGGHMFSPNKTYRRFHRKINTTE 120
Query: 458 XXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRL-KAWS 634
ARGH I +PELPLV+++++Q INKT AV F + K
Sbjct: 121 KRHAVAAAIAATGCPSLVMARGHRINNVPELPLVISNEIQNINKTSTAVEFFKNFGKGLE 180
Query: 635 DILK-VYKSQRLRAGKGKMRNRRRI 706
+ +K + S +R GKGKMRNRRR+
Sbjct: 181 EEMKRIESSIAIRCGKGKMRNRRRV 205
>UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2;
Oligohymenophorea|Rep: Ribosomal protein L4, putative -
Paramecium tetraurelia
Length = 406
Score = 195 bits (476), Expect = 8e-49
Identities = 97/197 (49%), Positives = 122/197 (61%), Gaps = 1/197 (0%)
Frame = +2
Query: 113 PLVSVYSEKSET-VQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTS 289
PLVSV+S T V PLP VF+ PIRPD+V+ VH +++KN RQ + V+ +AG Q S
Sbjct: 5 PLVSVFSADDSTKVTAKHIPLPAVFQTPIRPDIVSFVHTNIAKNRRQAHAVNPQAGMQHS 64
Query: 290 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXX 469
AESWGTGRAVARIPRV G GTHRSGQ AFGN CR GRM P K WRRWH
Sbjct: 65 AESWGTGRAVARIPRVSGSGTHRSGQAAFGNQCRKGRMSLPIKVWRRWHRRVNIKQKRHA 124
Query: 470 XXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKV 649
ARGH I ++P++PLVV DK++ KT A+ FL+R A+ D+ KV
Sbjct: 125 AATAVAATGIVPLVLARGHRISQVPQIPLVVEDKIESYEKTTDALNFLKRFGAFEDVQKV 184
Query: 650 YKSQRLRAGKGKMRNRR 700
++ +RAG K R ++
Sbjct: 185 VSTKVVRAGISKQRGKK 201
>UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L4/L1, putative - Plasmodium chabaudi
Length = 411
Score = 191 bits (466), Expect = 1e-47
Identities = 96/201 (47%), Positives = 123/201 (61%)
Frame = +2
Query: 98 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 277
++ RPL +VY + V G + +P VF+ PIR DL+ + +MSKN R PY V AG
Sbjct: 1 MATIRPLANVYGINGKKVVGEVE-IPVVFQTPIRHDLIEYIFSNMSKNIRHPYAVKLGAG 59
Query: 278 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXX 457
++TSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCRGG MF PTK WRRW
Sbjct: 60 YETSAESWGTGRAVARIPRVPGGGTHRAGQAAFGNMCRGGGMFNPTKIWRRWGRKINLKE 119
Query: 458 XXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSD 637
ARGH I + E+PLV ++ ++ + KTK A+ FL L +
Sbjct: 120 KRYAVCSSIAASGITSLVLARGHRISNLKEVPLVASNDIESMQKTKDALKFLISLGLRDE 179
Query: 638 ILKVYKSQRLRAGKGKMRNRR 700
+ ++ KS +LRA GKMRNR+
Sbjct: 180 VNRLIKSXKLRARXGKMRNRK 200
>UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL4 -
Streblomastix strix
Length = 492
Score = 186 bits (453), Expect = 5e-46
Identities = 94/199 (47%), Positives = 121/199 (60%)
Frame = +2
Query: 116 LVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAE 295
L +VY+ + A P + +PIRPD+V+ VH++++KN RQP+ AGHQ SAE
Sbjct: 7 LTTVYNTDGKARDTTAVPSVIRY-SPIRPDVVHFVHMNLAKNERQPFGRYYLAGHQHSAE 65
Query: 296 SWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXX 475
SWGTGRAVAR+PR+ G GT R+GQ AF N RGG M++P K WRRWH
Sbjct: 66 SWGTGRAVARVPRISGSGTSRNGQAAFANSARGGHMYSPLKVWRRWHRMVNVTQRRFAMC 125
Query: 476 XXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYK 655
ARGH I+ +PELPLVV+D V++I KTK+AV L LKA D+ +
Sbjct: 126 SAIAASSNPSLVLARGHKIDNVPELPLVVSDDVEQIKKTKEAVKVLAALKASDDVKHSAE 185
Query: 656 SQRLRAGKGKMRNRRRIQR 712
S+R+R G GK RNRR QR
Sbjct: 186 SKRIRVGSGKARNRRYTQR 204
>UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L4 - Entamoeba histolytica HM-1:IMSS
Length = 431
Score = 181 bits (441), Expect = 1e-44
Identities = 95/203 (46%), Positives = 126/203 (62%), Gaps = 1/203 (0%)
Frame = +2
Query: 107 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQT 286
+RP V++Y + + LP VF APIR D+V+ V+ + SKN+RQP VS +AG Q
Sbjct: 3 SRPFVTIYDGITGEAEKTQVRLPAVFLAPIRGDVVHFVYRNQSKNTRQPEGVSTKAGKQH 62
Query: 287 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXX 466
SA SWGTGRAVARIPR+ G G+ R+GQGAFGNM R G MF+P K +R+W
Sbjct: 63 SAISWGTGRAVARIPRISGSGSGRNGQGAFGNMTRKGHMFSPLKNFRKWQRKTPKQMRRF 122
Query: 467 XXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADK-VQEINKTKQAVIFLRRLKAWSDIL 643
ARGH I +P++PLVV K + I KTKQAV L+++ A+SD+L
Sbjct: 123 AVASCIAASAVPALVSARGHHIAGVPQIPLVVNSKSISVIKKTKQAVYLLKKINAYSDVL 182
Query: 644 KVYKSQRLRAGKGKMRNRRRIQR 712
KV S+ +RAG+GKMR R+ +R
Sbjct: 183 KVIASKTVRAGQGKMRGRKIKER 205
>UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=2; Theileria|Rep: 60S ribosomal subunit
protein L4/L1, putative - Theileria annulata
Length = 426
Score = 180 bits (439), Expect = 2e-44
Identities = 88/196 (44%), Positives = 120/196 (61%)
Frame = +2
Query: 104 VARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 283
V RP+VSV+S +E G+ +P VF P+R DLV+ VH +MSKN RQ Y +S+ +G+Q
Sbjct: 2 VHRPVVSVFSVSTEKRMGSTI-MPRVFSTPLRSDLVHYVHTNMSKNKRQAYAISRMSGYQ 60
Query: 284 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXX 463
TSA SWGTGRA++R PRV+GGGTHRSGQ A+ N CR G MFAPT+ WR WH
Sbjct: 61 TSARSWGTGRALSRTPRVKGGGTHRSGQAAYANFCRAGGMFAPTRTWRHWHRKINLKEKR 120
Query: 464 XXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDIL 643
+RGH +E +PELPLV+ D ++ + KT+ AV L + ++
Sbjct: 121 LALAVSVAATASVPLVMSRGHRVESVPELPLVLDDTMETLTKTRDAVELLNSMGLADELK 180
Query: 644 KVYKSQRLRAGKGKMR 691
+V ++R + KGK R
Sbjct: 181 RVSVTKRTKR-KGKKR 195
>UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia
bovis|Rep: Ribosomal protein RPL4A - Babesia bovis
Length = 360
Score = 178 bits (433), Expect = 1e-43
Identities = 90/193 (46%), Positives = 119/193 (61%), Gaps = 1/193 (0%)
Frame = +2
Query: 110 RPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTS 289
RP VSV++ GA +P VF AP+R DLV VH +MSKN RQ Y VSK +G+QTS
Sbjct: 4 RPEVSVHNATDGERVGATL-MPKVFSAPLRLDLVRIVHTNMSKNRRQAYAVSKMSGYQTS 62
Query: 290 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXX 469
A SWGTGRA+AR+PRV+GGGTHR+GQ A+ N CR G M+APT+ WRRWH
Sbjct: 63 ARSWGTGRAMARVPRVKGGGTHRAGQAAYANFCRAGGMYAPTRVWRRWHRKVNLKEKRQA 122
Query: 470 XXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKV 649
+RGH IE + E+P+VV D +++INKTK AV L + +++ ++
Sbjct: 123 LASALAATAVVPVVMSRGHRIEALREVPMVVDDAIEQINKTKDAVKLLETIGLGAELKRI 182
Query: 650 YK-SQRLRAGKGK 685
K + R R G+ K
Sbjct: 183 DKVTGRARDGRKK 195
>UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L4 -
Encephalitozoon cuniculi
Length = 335
Score = 175 bits (427), Expect = 7e-43
Identities = 92/198 (46%), Positives = 113/198 (57%)
Frame = +2
Query: 119 VSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAES 298
++ Y TV+ LP VF PIR DLV + +RQPY VSK AG Q SAES
Sbjct: 5 INCYEADGVTVKKTLD-LPEVFSVPIRQDLVLKTYSLYRMKTRQPYAVSKNAGMQHSAES 63
Query: 299 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXX 478
WGTGRA+AR+PRV+GGGT R+GQGAF N CR GRM PTK RRW
Sbjct: 64 WGTGRAIARVPRVKGGGTRRAGQGAFANFCRKGRMAHPTKTHRRWARKVVENTKKIAEAM 123
Query: 479 XXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKS 658
+ARGH I + LP++V+D + + KTK AV LR L ++ +V KS
Sbjct: 124 AVAASAQASLVEARGHRISDVKMLPIIVSDDIAKARKTKDAVEILRNLNMTEELKRVEKS 183
Query: 659 QRLRAGKGKMRNRRRIQR 712
+ +R GKGKMRNRR QR
Sbjct: 184 RGVRCGKGKMRNRRYTQR 201
>UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brugia
malayi (Filarial nematode worm)
Length = 306
Score = 172 bits (419), Expect = 6e-42
Identities = 79/104 (75%), Positives = 88/104 (84%)
Frame = +2
Query: 125 VYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWG 304
VY++KSE + LP VF+AP+RPD+V+ VH + KN RQPY VS EAGHQTSAESWG
Sbjct: 127 VYNDKSEPTDTQIR-LPGVFRAPLRPDIVSFVHDQIRKNKRQPYAVSVEAGHQTSAESWG 185
Query: 305 TGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 436
TGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 186 TGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKVFRRWH 229
>UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 349
Score = 164 bits (399), Expect = 2e-39
Identities = 81/162 (50%), Positives = 99/162 (61%), Gaps = 3/162 (1%)
Frame = +2
Query: 236 KNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT 415
++++ V +AGHQTSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPT
Sbjct: 22 ESTKDTLTVPNKAGHQTSAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPT 81
Query: 416 KPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKV---QEIN 586
K WR+WH ARGH + +PE+PLV++ I
Sbjct: 82 KVWRKWHQKINLNQKRFATASALAASGSPALLMARGHNVSTVPEVPLVISSTAFADAAIR 141
Query: 587 KTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQR 712
KT AV L+ + A +D K S++LRAGKGK+R RR QR
Sbjct: 142 KTSAAVALLKAVGAGADCEKAKNSRKLRAGKGKLRGRRHKQR 183
>UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2;
Cryptomonadaceae|Rep: 60s ribosomal protein L1 -
Guillardia theta (Cryptomonas phi)
Length = 255
Score = 164 bits (398), Expect = 2e-39
Identities = 81/177 (45%), Positives = 107/177 (60%)
Frame = +2
Query: 170 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 349
+P VF + IR D+V VH +M KN RQ Y VS AG TSA SWGTGRAV+R+PRV G G
Sbjct: 19 IPKVFFSKIRVDIVRFVHKNMCKNKRQVYAVSSTAGMGTSAVSWGTGRAVSRVPRVPGSG 78
Query: 350 THRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHI 529
THRSGQGA N CRGGR+F PT WR+WH +RG+
Sbjct: 79 THRSGQGAIANFCRGGRIFNPTTIWRKWHHKINKNQRKSAIFSAIASSSIVSIIVSRGYR 138
Query: 530 IEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRR 700
++ IPE+P V+ D +++I KT+ + L L + I++ ++L++GKGKMRNRR
Sbjct: 139 VKTIPEIPFVIEDSIEKIPKTRDLIKILTTL-GINSIVRNKLKRKLKSGKGKMRNRR 194
>UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 370
Score = 150 bits (363), Expect = 4e-35
Identities = 74/196 (37%), Positives = 114/196 (58%)
Frame = +2
Query: 104 VARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 283
++R V+V +++ + + + LP VF PIR ++V +V+V+++KN++QP+ AG +
Sbjct: 1 MSRQTVNVLTQEGQ--KASTIELPKVFDTPIRAEVVKEVYVNLAKNAQQPHANDPMAGKK 58
Query: 284 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXX 463
SA SWGTGRA A +PRV G G++R+GQGA+ N CRGG F P RRW
Sbjct: 59 VSAISWGTGRAKACVPRVNGSGSNRNGQGAYANFCRGGHRFNPPTLLRRWFRPVPSRQRK 118
Query: 464 XXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDIL 643
QARGH++ ++ E+P+VV D VQEI +T+ AV L+++ + D+
Sbjct: 119 FAIASAIAATAVVPLVQARGHVLGEVKEVPIVVVDAVQEIKRTRDAVELLKKVGVYGDVQ 178
Query: 644 KVYKSQRLRAGKGKMR 691
+V R+ KGK R
Sbjct: 179 RVLDGSVHRSSKGKFR 194
>UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_79_45017_44067 - Giardia lamblia
ATCC 50803
Length = 316
Score = 137 bits (331), Expect = 3e-31
Identities = 79/200 (39%), Positives = 101/200 (50%)
Frame = +2
Query: 113 PLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSA 292
P V V+ V A P P VF P+RPD++N VH + K R PY VS+ AG Q +A
Sbjct: 3 PTVKVFGPTGTQV--AELPRPKVFNVPLRPDIINFVHTQLRKCLRTPYAVSRYAGVQCTA 60
Query: 293 ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXX 472
SWG GRAVAR+PR G G GA+ N RGG M PT RRW
Sbjct: 61 HSWGPGRAVARLPRKHG------GIGAYANFARGGHMAHPTTVIRRWCRKVNLNQRRYAV 114
Query: 473 XXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVY 652
+ARGH I +P +PLVV + KTK A+ ++ + D+ +
Sbjct: 115 ASALAASANAALVEARGHRIADVPSIPLVV--DTDNVTKTKDALAIIKAVGVLRDVERCK 172
Query: 653 KSQRLRAGKGKMRNRRRIQR 712
S+ +RAG+GKMRNRR I R
Sbjct: 173 DSRHIRAGRGKMRNRRYITR 192
>UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanopyrus kandleri
Length = 260
Score = 123 bits (297), Expect = 4e-27
Identities = 66/200 (33%), Positives = 105/200 (52%), Gaps = 1/200 (0%)
Frame = +2
Query: 113 PLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSA 292
P+ ++ E+ +TV+ LP F+ P+R DL+ ++ N RQPY AG +TSA
Sbjct: 4 PVFNLEGEEVDTVE-----LPSFFEEPVRKDLIRRAVLAAQANRRQPYGTDPRAGFRTSA 58
Query: 293 ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG-RMFAPTKPWRRWHXXXXXXXXXXX 469
ESWG G VA +PRV+G +G+ A GG + APT P + W
Sbjct: 59 ESWGAGHGVAMVPRVKGRRHPAAGRAARVAQAVGGQKAHAPT-PEKDWTQRVNRKERRAA 117
Query: 470 XXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKV 649
+ RGH+I+ +P LP+VV D+++ +NK ++ F + + W+D+ +
Sbjct: 118 LRSALAATAKPEFVKERGHVIDDVPHLPVVVVDELKSLNKAREVREFFKSVGLWADVERA 177
Query: 650 YKSQRLRAGKGKMRNRRRIQ 709
++R+RAGKGK R RR ++
Sbjct: 178 KSNRRIRAGKGKRRGRRYVK 197
>UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2;
Endopterygota|Rep: Ribosomal protein 23 - Lonomia
obliqua (Moth)
Length = 274
Score = 118 bits (283), Expect = 2e-25
Identities = 51/65 (78%), Positives = 62/65 (95%)
Frame = +2
Query: 518 RGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNR 697
RG++++ + E+PLVV+DK+QEINKTKQAVIFLRR+KAWSD+LKVYKSQRLRAGKGKMRNR
Sbjct: 5 RGYVVDNVSEIPLVVSDKIQEINKTKQAVIFLRRIKAWSDVLKVYKSQRLRAGKGKMRNR 64
Query: 698 RRIQR 712
RR+ R
Sbjct: 65 RRLHR 69
>UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9;
Archaea|Rep: 50S ribosomal protein L4P - Pyrobaculum
aerophilum
Length = 283
Score = 112 bits (269), Expect = 9e-24
Identities = 63/176 (35%), Positives = 86/176 (48%)
Frame = +2
Query: 173 PFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGT 352
P F PIRPDL+ ++S QP V + AG + S ES+G G +ARIPR +G
Sbjct: 45 PLHFLEPIRPDLIRRAYLSALSARFQPKGVYEGAGKEHSCESFGVGLGIARIPRYKGSLW 104
Query: 353 HRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHII 532
R G F RGGR P K ++ H ARGH++
Sbjct: 105 PR---GCFAPNTRGGRRAHPPKVEKKLHEEINKKEKKLAIRSAIAATAYRSWVAARGHVV 161
Query: 533 EKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRR 700
EK+P LP+VV ++IN+ K+A L W D+ + + ++RAGKGKMR RR
Sbjct: 162 EKVPSLPVVVVGDAEKINRAKEAKKLFEALGLWPDVERAAEGVKIRAGKGKMRGRR 217
>UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;
Ostreococcus tauri|Rep: Ribosomal protein
RPL1/RPL2/RL4L4 - Ostreococcus tauri
Length = 404
Score = 96.7 bits (230), Expect = 5e-19
Identities = 66/195 (33%), Positives = 89/195 (45%), Gaps = 9/195 (4%)
Frame = +2
Query: 155 GAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPR 334
GA+ +P VF +PIR D+VN VH ++KN + + + A PR
Sbjct: 15 GASCAMPEVFLSPIRADIVNAVHTGLAKNDSTTDEIQLCFLLDSQGKRTPCTDVPATKPR 74
Query: 335 VRGGGTHRSGQGAFGNMCRGGRMFAPTK---------PWRRWHXXXXXXXXXXXXXXXXX 487
G + +CR AP K WRRWH
Sbjct: 75 PSPGAP--VARSLVFRVCRAVVPTAPVKGRSVTCAAVTWRRWHRRVNIKEKRYAVCSAIA 132
Query: 488 XXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRL 667
ARGH +E +PE+PLVV D I KT +AV L++L A++DI KV S+ +
Sbjct: 133 ASAVPSLLLARGHRVEGVPEVPLVVDDSASSIKKTAKAVELLKQLGAYADIEKVKASRNV 192
Query: 668 RAGKGKMRNRRRIQR 712
R+GKGKMRNRR +QR
Sbjct: 193 RSGKGKMRNRRYVQR 207
>UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 259
Score = 96.7 bits (230), Expect = 5e-19
Identities = 54/194 (27%), Positives = 95/194 (48%)
Frame = +2
Query: 119 VSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAES 298
++VYS K + + LP +F+ RPD++ +SM QP+ AG +T+AES
Sbjct: 4 INVYSLKGDITEEIE--LPEIFEEEYRPDVIKRAVISMQTARIQPWGTDPMAGKRTTAES 61
Query: 299 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXX 478
+G+GR A +PRV+G S + AF GGR P + +H
Sbjct: 62 FGSGRGAAMVPRVKG-----SSKAAFVPQAIGGRKAHPPRVNTIYHEKINKKERTLAIRS 116
Query: 479 XXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKS 658
+ RGH + ++ ++P V+ D+++ + TK+ + L DI++ K
Sbjct: 117 AIAATANKELVEQRGHQVSELEQIPFVIDDEIETVKTTKETREIFKDLGIMDDIVRAKKG 176
Query: 659 QRLRAGKGKMRNRR 700
+++++GKGK+R R+
Sbjct: 177 RKIKSGKGKLRGRK 190
>UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3;
Archaea|Rep: 50S ribosomal protein L4P - Sulfolobus
solfataricus
Length = 267
Score = 94.3 bits (224), Expect = 3e-18
Identities = 54/177 (30%), Positives = 85/177 (48%)
Frame = +2
Query: 170 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 349
LP +F P+R DL+ V ++ +S QP AG +TSAES+G +AR+PRV+
Sbjct: 25 LPIIFSFPVRKDLIRRVFIAEFTHSLQPKGRDPNAGKRTSAESFGINLGMARVPRVKN-- 82
Query: 350 THRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHI 529
SG+ A GGR+ P ++ +ARGH+
Sbjct: 83 ---SGEAALAPNTVGGRLAFPPSVNKKLAEEANVKEKRLAVISALSATADIAFVRARGHV 139
Query: 530 IEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRR 700
+ P+VV D + + T + FL+++ + D+ +V + R+RAGKGKMR R+
Sbjct: 140 FKDSVRFPIVVTDDIVNLKTTSEVEEFLKKIGVYDDVERVKERIRIRAGKGKMRGRK 196
>UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Archaeoglobus fulgidus
Length = 252
Score = 89.4 bits (212), Expect = 8e-17
Identities = 52/181 (28%), Positives = 85/181 (46%)
Frame = +2
Query: 170 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 349
LP VF RPD++ +++ + RQPY + +G S E+WG G AR+PR + G
Sbjct: 18 LPEVFAEEFRPDIIKRAVLALQSHRRQPYGPNPLSGVDYSWENWGPGHGYARVPRWKLGR 77
Query: 350 THRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHI 529
+ GGR P KP R+W + R H+
Sbjct: 78 -----RAVVVPQAVGGRRAHPPKPERKWAEKINKKEMRKALKSAIAATANEELVRQRSHV 132
Query: 530 IEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQ 709
E ELP VV+++++ + +TK R + ++D+ + + +R RAG+GKMR RR ++
Sbjct: 133 FEG--ELPKVVSNELESVKRTKDVAEVFRAIGVYADVERAKERKRYRAGRGKMRGRRYVK 190
Query: 710 R 712
+
Sbjct: 191 K 191
>UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 253
Score = 88.6 bits (210), Expect = 1e-16
Identities = 39/60 (65%), Positives = 51/60 (85%)
Frame = +2
Query: 515 ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRN 694
++GH I ++PELPLVV DKV+ KT++AV+ L++LKAW+DI KVY SQR+RAGKGKMRN
Sbjct: 2 SKGHRIGEVPELPLVVEDKVEGYKKTEEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRN 61
>UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiella
natans|Rep: Ribosomal protein L4A - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 278
Score = 87.0 bits (206), Expect = 4e-16
Identities = 41/133 (30%), Positives = 67/133 (50%)
Frame = +2
Query: 272 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXX 451
+G+Q SA+SWG GR +ARIPR++G GT ++GQGA NMCRGGR+F ++W+
Sbjct: 59 SGNQVSAKSWGPGRGLARIPRIKGSGTRKAGQGALANMCRGGRLFGNRNYSKKWNIKTNR 118
Query: 452 XXXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAW 631
+RGH ++ + P+++ ++ I + ++ L+ +
Sbjct: 119 KVKVSAFKTALLSTLFETLVVSRGHSLKDVKNFPMIIDSILKYIWHPSELLMLLKLYGGY 178
Query: 632 SDILKVYKSQRLR 670
SD K S R
Sbjct: 179 SDFKKAMISHAKR 191
>UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8;
Archaea|Rep: 50S ribosomal protein L4P - Aeropyrum
pernix
Length = 272
Score = 81.8 bits (193), Expect = 2e-14
Identities = 60/196 (30%), Positives = 87/196 (44%), Gaps = 1/196 (0%)
Frame = +2
Query: 116 LVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAE 295
+V VY E+ LP +F+ P+R DL+ +S QP AG +TSA
Sbjct: 15 IVPVYDERGGEKDSVV--LPQIFRFPVRKDLIRRAFLSEFTARLQPKGRDPMAGKRTSAV 72
Query: 296 SWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXX 475
S G GR VAR+PR++G S + A NM RGGR P + +
Sbjct: 73 SLGVGRGVARVPRIKG-----SLRAALVNMARGGRAAHPPRVEKVLKEYINKKEKRLATI 127
Query: 476 XXXXXXXXXXXXQARGHIIEKIPELPLVVADKV-QEINKTKQAVIFLRRLKAWSDILKVY 652
+ RGH LP+V+ V +I+ ++A L + + D+L+
Sbjct: 128 SAISATSREDLVRQRGHRF-SAETLPIVLDSSVLAKISTAREARSLLESVGVYEDVLRAK 186
Query: 653 KSQRLRAGKGKMRNRR 700
+ +R AGKGKMR RR
Sbjct: 187 EGKRYNAGKGKMRGRR 202
>UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L4P -
Thermoplasma acidophilum
Length = 255
Score = 80.2 bits (189), Expect = 5e-14
Identities = 56/194 (28%), Positives = 89/194 (45%)
Frame = +2
Query: 119 VSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAES 298
V +YS E ++G LP VF +R D++ ++S + RQPY S AG + +
Sbjct: 5 VPIYSVSGE-MKGEID-LPEVFDTEVREDIIRRAFRAISLSMRQPYGSSPLAGMRRVGHT 62
Query: 299 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXX 478
G ++R+PR+ GG A G G+ + + +
Sbjct: 63 TRPGLGISRMPRIAGGSRVVGIASAVG-----GKSAHSPRTTKNLYVKINDRERKMAKYS 117
Query: 479 XXXXXXXXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKS 658
+ RGH ++ +LP+VV D V+ INKTK A+ L+ L + DI + +
Sbjct: 118 AIALTASVEAVKKRGHRFKEGLKLPIVVEDGVEGINKTKDAIALLKNLGVYEDIERSREG 177
Query: 659 QRLRAGKGKMRNRR 700
+ +RAG+GKMR RR
Sbjct: 178 KHIRAGRGKMRGRR 191
>UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2;
Thermoprotei|Rep: Ribosomal protein L4 - Cenarchaeum
symbiosum
Length = 271
Score = 79.8 bits (188), Expect = 6e-14
Identities = 54/184 (29%), Positives = 82/184 (44%), Gaps = 2/184 (1%)
Frame = +2
Query: 152 QGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWG--TGRAVAR 325
+G LP VF P R DL+ + + + QP AG SA+S TG AR
Sbjct: 12 KGKEITLPPVFGTPYRRDLIKKAYTILDTHHFQPKGTHPTAGMDVSADSLNPPTGHGQAR 71
Query: 326 IPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXX 505
I R++GGG R G+ RGGR P K + H
Sbjct: 72 IARMKGGGGRRRGEAGEVASIRGGRQAHPPKVQKVIHKKINKKEKKLALCSAIAATASKS 131
Query: 506 XXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGK 685
RGHII+ I ELP+V++D ++ ++K + L L ++D+ ++ + ++ R GK
Sbjct: 132 TVAGRGHIIDGI-ELPIVISDDIESVSKASEVRKILSALGLFADVNRL-EGRKPRTGKSA 189
Query: 686 MRNR 697
+R R
Sbjct: 190 LRGR 193
>UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 248
Score = 74.5 bits (175), Expect = 2e-12
Identities = 33/49 (67%), Positives = 39/49 (79%)
Frame = +2
Query: 203 DLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 349
D+VN VH ++ KN QPY VS+ AG+QTSAESWGTGRA +PRVRGGG
Sbjct: 25 DVVNFVHSNLHKNDSQPYAVSESAGYQTSAESWGTGRARGPMPRVRGGG 73
Score = 72.9 bits (171), Expect = 7e-12
Identities = 33/48 (68%), Positives = 40/48 (83%)
Frame = +2
Query: 569 KVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRRRIQR 712
KV+ KTK+ V+ L++LKAW+DI KVY SQR+RAGKGKMRNRR IQR
Sbjct: 98 KVEGYKKTKEEVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRPIQR 145
>UniRef50_A7R5H8 Cluster: Chromosome undetermined scaffold_974,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_974, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 386
Score = 69.7 bits (163), Expect = 7e-11
Identities = 32/66 (48%), Positives = 41/66 (62%)
Frame = +2
Query: 515 ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRN 694
ARGH IE +PELPLV+ D + + KT A+ L++ A+ D K S + GKGKMRN
Sbjct: 2 ARGHRIESVPELPLVIGDSAESVEKTSAAIDILKQFDAYLDTEKAKDSHAIHPGKGKMRN 61
Query: 695 RRRIQR 712
RR I R
Sbjct: 62 RRYISR 67
>UniRef50_P60847 Cluster: 50S ribosomal protein L4P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L4P -
Nanoarchaeum equitans
Length = 268
Score = 66.9 bits (156), Expect = 5e-10
Identities = 58/192 (30%), Positives = 87/192 (45%), Gaps = 11/192 (5%)
Frame = +2
Query: 170 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSA------ESWGT--GRAVAR 325
LP F IR D++ +++ + RQPY S AG Q SA SW T GR ++R
Sbjct: 18 LPPQFNEKIRFDVIKRAFLAIQSHKRQPYGASPIAGKQHSAWTSKRRRSWRTSYGRGISR 77
Query: 326 IPRV---RGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXX 496
+ R R G +G + P K + W+
Sbjct: 78 VSRAILRRHGALFYWVARNIAQAVKGKKAHPP-KAEKDWYEKINKKERRLAIRSALAATK 136
Query: 497 XXXXXQARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAG 676
+ARGHII+K +P+VV D ++++ KTK+ L +L ++ +VY+ +R RAG
Sbjct: 137 ELDLVKARGHIIDK--PVPIVV-DGLEQLRKTKEIQQLLLKLGLEKELERVYEIKR-RAG 192
Query: 677 KGKMRNRRRIQR 712
KGK R R I+R
Sbjct: 193 KGKRRGRAYIER 204
>UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarcula
marismortui|Rep: 50S ribosomal protein L4P - Haloarcula
marismortui (Halobacterium marismortui)
Length = 246
Score = 65.7 bits (153), Expect = 1e-09
Identities = 49/177 (27%), Positives = 81/177 (45%)
Frame = +2
Query: 170 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 349
LP VF+ P+R DL+ + N +Q Y + AG +T AES+G+GR A +P+ + G
Sbjct: 18 LPDVFETPVRSDLIGKAVRAAQANRKQDYGSDEYAGLRTPAESFGSGRGQAHVPK-QDGR 76
Query: 350 THRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHI 529
R Q GR P K + RGH
Sbjct: 77 ARRVPQAV------KGRSAHPPKTEKDRSLDLNDKERQLAVRSALAATADADLVADRGHE 130
Query: 530 IEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRR 700
++ E+P+VV+D +++ KT++ V L L +DI + ++ +++AG+G R R+
Sbjct: 131 FDR-DEVPVVVSDDFEDLVKTQEVVSLLEALDVHADIDRADET-KIKAGQGSARGRK 185
>UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular
organisms|Rep: Ribosomal protein L4 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 304
Score = 50.8 bits (116), Expect = 3e-05
Identities = 54/208 (25%), Positives = 77/208 (37%), Gaps = 22/208 (10%)
Frame = +2
Query: 143 ETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK-------EAGHQTSAESW 301
E G A LP VF IR DL+ ++ N RQ Y + +AG + S E W
Sbjct: 41 EAKNGKAVTLPDVFSGEIREDLIRRAVLASRANRRQSYGHREHDGKRKPQAGMKHSVEWW 100
Query: 302 GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXX 481
G GR V+RI R G T A RGGR K + W
Sbjct: 101 GKGRGVSRIMRKAGQRT-----AAQNPHTRGGRRAHGPKVDKDWSQKINSKENRIARDSA 155
Query: 482 XXXXXXXXXXQARGHIIEKIPELPLVV---------ADKVQEIN------KTKQAVIFLR 616
RGH E P+++ D+ ++ T++ V +
Sbjct: 156 IAASASSNLVSERGHHFEASLRFPIIIDGYVESREGGDEKYDLESLPLQYSTRKFVAMME 215
Query: 617 RLKAWSDILKVYKSQRLRAGKGKMRNRR 700
L +D+ + + +RAGKG MR R+
Sbjct: 216 GLGLGADLDRARTGRTIRAGKGTMRGRK 243
>UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major strain Friedlin
Length = 534
Score = 44.4 bits (100), Expect = 0.003
Identities = 37/119 (31%), Positives = 50/119 (42%), Gaps = 2/119 (1%)
Frame = +1
Query: 346 WYS*VRSGCLR*HVSWWTYVRPHEALAALAPSRQPPTAESGLGGSRCCYRRPSARSG*RT 525
W VR C+R HV WW +VR E L LAP QP A L C R A +G
Sbjct: 134 WNEHVRRRCVRQHVPWWPHVRADEDLPPLAPQDQP--APEALRCGVCARRVVCAVAGDVA 191
Query: 526 HY*KDSRA--SLGCSRQSPRDQQDQTGCHLPEAPQGMV*YP*GVQVSASSCW*G*NAQP 696
RA + G P ++D+ G +PE + +++ CW +AQP
Sbjct: 192 RPPDRQRAGGAAGGGGLDPGLREDEGGYGVPEGDRCDRRREPRERLARDPCWPRQDAQP 250
>UniRef50_Q95YH2 Cluster: Ribosomal protein L4; n=1; Paramecium
caudatum|Rep: Ribosomal protein L4 - Paramecium caudatum
Length = 252
Score = 44.0 bits (99), Expect = 0.004
Identities = 19/47 (40%), Positives = 30/47 (63%)
Frame = +2
Query: 560 VADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNRR 700
V DK++ KTK A+ FL+R A+ D+ KV ++ +RAG K R ++
Sbjct: 1 VEDKIESYEKTKDALNFLKRFGAFEDVQKVVSTKTIRAGVSKSRGKK 47
>UniRef50_A7QKL2 Cluster: Chromosome chr2 scaffold_113, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr2 scaffold_113, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 145
Score = 41.9 bits (94), Expect = 0.015
Identities = 18/44 (40%), Positives = 28/44 (63%)
Frame = +2
Query: 515 ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILK 646
ARGH IE + ELPLV+ D + ++KT + L+++ A D+ K
Sbjct: 24 ARGHRIESVLELPLVIGDSTKSVDKTSTTIDILKQVGACPDVEK 67
>UniRef50_Q6ZR89 Cluster: CDNA FLJ46551 fis, clone THYMU3038687;
n=1; Homo sapiens|Rep: CDNA FLJ46551 fis, clone
THYMU3038687 - Homo sapiens (Human)
Length = 189
Score = 37.5 bits (83), Expect = 0.32
Identities = 22/74 (29%), Positives = 30/74 (40%), Gaps = 5/74 (6%)
Frame = +1
Query: 307 WTCCRPNSACPWW-----WYS*VRSGCLR*HVSWWTYVRPHEALAALAPSRQPPTAESGL 471
WT CR +AC W W++ V +GC W + H R+P E L
Sbjct: 79 WTGCRSTAACSRWRGCRPWWASVCTGCRSCVQRWRNSHQDHVLWGGPPEPRRPVGVERSL 138
Query: 472 GGSRCCYRRPSARS 513
G+ C P+ RS
Sbjct: 139 HGAPSCLSTPAPRS 152
>UniRef50_Q9VDD2 Cluster: CG17299-PF, isoform F; n=18; Diptera|Rep:
CG17299-PF, isoform F - Drosophila melanogaster (Fruit
fly)
Length = 1400
Score = 35.9 bits (79), Expect = 0.98
Identities = 29/88 (32%), Positives = 35/88 (39%), Gaps = 2/88 (2%)
Frame = +2
Query: 146 TVQGAAKP--LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAV 319
TV G A P P +F RP +D K+ P A T + S GTG A
Sbjct: 670 TVHGIASPNRRPTIFDV-FRPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPAT 728
Query: 320 ARIPRVRGGGTHRSGQGAFGNMCRGGRM 403
+ GG +GQGA G GG M
Sbjct: 729 SSAAGGAGGAAAAAGQGAAGG--AGGLM 754
>UniRef50_Q5NB71 Cluster: Putative uncharacterized protein
P0431F01.18; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0431F01.18 - Oryza sativa subsp. japonica (Rice)
Length = 320
Score = 35.5 bits (78), Expect = 1.3
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = +2
Query: 320 ARIPRVRGGGTHRSGQGAFGNMCRGG 397
AR PR GGG HR GA G + RGG
Sbjct: 201 ARRPRAAGGGKHRGAHGANGGVARGG 226
>UniRef50_A7SGS6 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 263
Score = 35.5 bits (78), Expect = 1.3
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = -3
Query: 404 TYVHHDTCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQHWFGDQP 270
TY+ H Y +HP T+ YHH H + ++ Q+P + H + P
Sbjct: 114 TYLTHR--YHQHPQVTHRYHHQ-HPQVTHRYHQHPQVTHRYHQHP 155
Score = 33.9 bits (74), Expect = 4.0
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = -3
Query: 380 YRRHPDRTYEYHHHGHAEFGRQHVQYPMIQHWFGDQP 270
Y +HP T+ YHH R H Q P I H + P
Sbjct: 75 YHQHPQVTHRYHHQHPQVTYRYHHQQPQITHRYHQHP 111
Score = 33.1 bits (72), Expect = 6.9
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = -3
Query: 404 TYVHHDTCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQHWFGDQPP 267
T + +++HP T+ YHH H + ++ Q+P + H + Q P
Sbjct: 3 TPTSYSQLFQQHPQVTHHYHHQ-HPQVTHRYHQHPQVTHRYQYQHP 47
>UniRef50_UPI000058888F Cluster: PREDICTED: similar to
ENSANGP00000014064; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to ENSANGP00000014064
- Strongylocentrotus purpuratus
Length = 300
Score = 34.7 bits (76), Expect = 2.3
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -3
Query: 392 HDTCYRRHPDRTYEYHHHGHAEFGRQH 312
H+ YR H + +HHHGH+ G H
Sbjct: 106 HERAYRPHSNSDGHHHHHGHSHHGHSH 132
>UniRef50_UPI000023E82F Cluster: hypothetical protein FG01599.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG01599.1 - Gibberella zeae PH-1
Length = 1347
Score = 33.9 bits (74), Expect = 4.0
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = -3
Query: 401 YVHHD-TCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQH 288
Y H+D Y +H D + HHHG +G H + +H
Sbjct: 478 YDHNDYNYYHKHHDNKHYDHHHGDKHYGHHHEHHKHYEH 516
>UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 150
Score = 33.9 bits (74), Expect = 4.0
Identities = 17/37 (45%), Positives = 19/37 (51%)
Frame = +2
Query: 290 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 400
A+SW TGRA A + R R GG R A N G R
Sbjct: 36 AQSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72
>UniRef50_UPI00015B4B32 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 1628
Score = 33.5 bits (73), Expect = 5.2
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = -3
Query: 377 RRHPDRTYEYHHHGHAEFGRQHVQ-YPMIQHWF 282
R PD + +HHHGH G HV+ YP F
Sbjct: 181 RGAPDTRHGHHHHGHHNHGHHHVEPYPATDSLF 213
>UniRef50_A1FG00 Cluster: Putative uncharacterized protein; n=1;
Pseudomonas putida W619|Rep: Putative uncharacterized
protein - Pseudomonas putida W619
Length = 852
Score = 33.5 bits (73), Expect = 5.2
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +3
Query: 420 PGGVGTVASTSDSGERPWRQPLLLPASQRSFRLEDTLLKRFPSFP 554
P V +V SD G WRQ L + + FRL LK P+ P
Sbjct: 321 PAFVSSVVKVSDRGPYTWRQALAISDAALKFRLNIGKLKASPALP 365
>UniRef50_Q7QNZ3 Cluster: GLP_149_9791_7437; n=2; Giardia lamblia
ATCC 50803|Rep: GLP_149_9791_7437 - Giardia lamblia ATCC
50803
Length = 784
Score = 33.1 bits (72), Expect = 6.9
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = +2
Query: 101 SVARPLVSVYSEKS--ETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEA 274
SVA P VYS+++ T +P P + + P ++ V + + + S+ PY +S+ +
Sbjct: 350 SVASP--PVYSDRAPHSTDFQRLRPAPLLPQTPSSDSNISLVTLPLGQESKDPYSLSRTS 407
Query: 275 GHQTSAESWGTGRAVARIPR 334
Q SA + R A+ PR
Sbjct: 408 LSQNSATTTNEFRVSAKTPR 427
>UniRef50_A4RCN1 Cluster: Putative uncharacterized protein; n=2;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 578
Score = 33.1 bits (72), Expect = 6.9
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = -3
Query: 410 GRTYVH-HDTCYRRHPDRTYEYHHHGHAEFGRQ-HVQYPMIQHWFGDQ 273
GR++ H H TC +HP + +HHH H H P H + D+
Sbjct: 455 GRSHNHDHHTC-GQHPSHHHHHHHHHHCSVSHSVHCDDPNHHHEYEDE 501
>UniRef50_P04196 Cluster: Histidine-rich glycoprotein precursor;
n=19; Eutheria|Rep: Histidine-rich glycoprotein
precursor - Homo sapiens (Human)
Length = 525
Score = 33.1 bits (72), Expect = 6.9
Identities = 15/45 (33%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = -3
Query: 395 HHDTCYRRHPDRTYEYHHHGHAEFGRQ-HVQYPMIQHWFGDQPPC 264
HH + H T+ H HGH G H +P H G P C
Sbjct: 364 HHPHAHHPHEHDTHRQHPHGHHPHGHHPHGHHPHGHHPHGHHPHC 408
>UniRef50_UPI0000F2E6E2 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 293
Score = 32.7 bits (71), Expect = 9.2
Identities = 18/37 (48%), Positives = 19/37 (51%)
Frame = +1
Query: 406 RPHEALAALAPSRQPPTAESGLGGSRCCYRRPSARSG 516
RP A AA P RQ P E GGS Y P+ RSG
Sbjct: 122 RPGPAQAARPPPRQWPCTECPGGGSGVVYHLPTERSG 158
>UniRef50_A3UKR0 Cluster: Probable C-5 cytosine-specific DNA
methylase; n=1; Oceanicaulis alexandrii HTCC2633|Rep:
Probable C-5 cytosine-specific DNA methylase -
Oceanicaulis alexandrii HTCC2633
Length = 681
Score = 32.7 bits (71), Expect = 9.2
Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Frame = +2
Query: 155 GAAKPLPFVFKAPIRPDLVNDVHVS----MSKNSRQPYCVSKEAGHQTSAESWGTGRAVA 322
G + F++K P +PD + HV+ +N+ +P+ + E H +A G A
Sbjct: 427 GEEDNVTFLYKHPAQPDALQVAHVAPHIMTMRNAGKPFTAANEPTHTVTAGGAGLSLVAA 486
Query: 323 RIPRVRGGGTHRSGQG 370
+ + GG S G
Sbjct: 487 FMAQHNGGANMESHAG 502
>UniRef50_A1HES9 Cluster: Putative uncharacterized protein; n=1;
Ralstonia pickettii 12J|Rep: Putative uncharacterized
protein - Ralstonia pickettii 12J
Length = 453
Score = 32.7 bits (71), Expect = 9.2
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +2
Query: 236 KNSRQPYCVSKEAGH-QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMC-RGGRM 403
+N+ P V+KEAGH Q +A G V R+ + GTH G+G GN RGG +
Sbjct: 49 ENAHGPQHVAKEAGHLQAAAFGNGLDHQVGRVADI-SVGTHEHGRG--GNRAQRGGAL 103
>UniRef50_A0GGU8 Cluster: Putative uncharacterized protein; n=1;
Burkholderia phytofirmans PsJN|Rep: Putative
uncharacterized protein - Burkholderia phytofirmans PsJN
Length = 753
Score = 32.7 bits (71), Expect = 9.2
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -3
Query: 407 RTYVHHDTCYRRHPDRTYEYHHHGHAEFGRQ 315
R + HHD C R R ++HHHGH GR+
Sbjct: 478 RDHHHHDRCLRDR--RRRDHHHHGHRLRGRR 506
>UniRef50_Q2H7T6 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 455
Score = 32.7 bits (71), Expect = 9.2
Identities = 22/60 (36%), Positives = 32/60 (53%)
Frame = -1
Query: 619 APQEDDSLFGLVDLLDFVGYNQGKLGNLFNNVSSSLNERWDAGSSNGCRQGRSPLSEVDA 440
A Q D S+F L ++ + L N + +SSL RWD+G +N CR+ P+ E DA
Sbjct: 25 ADQADLSVFALGGKINLSTVTEA-LSNA--SETSSLVIRWDSGDTNHCRKVSLPVVESDA 81
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 716,428,078
Number of Sequences: 1657284
Number of extensions: 14839772
Number of successful extensions: 51005
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 47096
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50484
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57024798702
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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