Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc8b23
         (156 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF283269-1|AAG15374.1|  114|Anopheles gambiae ribosomal protein ...    58   5e-11
U43499-1|AAA93302.1|  278|Anopheles gambiae a-emp protein.             22   2.2  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    21   3.9  
AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeo...    21   5.2  

>AF283269-1|AAG15374.1|  114|Anopheles gambiae ribosomal protein S26
           protein.
          Length = 114

 Score = 57.6 bits (133), Expect = 5e-11
 Identities = 25/35 (71%), Positives = 30/35 (85%)
 Frame = +2

Query: 11  HSKVVRNRSKKDRRIRTPPKSNFPRDMSRPQAVQR 115
           HSKVVRNRSK+ RRIRTPP+ +FP+DM+R Q  QR
Sbjct: 79  HSKVVRNRSKETRRIRTPPQRSFPKDMNRQQNAQR 113


>U43499-1|AAA93302.1|  278|Anopheles gambiae a-emp protein.
          Length = 278

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +3

Query: 45  TEESVLLPRVTSLGTCHVHRQ 107
           T+ S+  PR+T   T HV+ +
Sbjct: 176 TDGSIFPPRITKNSTLHVYEK 196


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = -1

Query: 120 HFLCTACG 97
           H+LC ACG
Sbjct: 138 HYLCNACG 145


>AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeotic
           protein protein.
          Length = 324

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +2

Query: 26  RNRSKKDRRIRTPPKSNFPRDMSRPQA 106
           R + KK+ + +  P S    DM+ PQ+
Sbjct: 296 RMKWKKENKTKGEPGSGDENDMTPPQS 322


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,084
Number of Sequences: 2352
Number of extensions: 1673
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 563,979
effective HSP length: 31
effective length of database: 491,067
effective search space used:  9821340
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)