Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc8b23
(156 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X77770-1|CAA54808.1| 115|Homo sapiens ribosomal protein S26 pro... 34 0.097
X69654-1|CAA49345.1| 115|Homo sapiens ribosomal protein S26 pro... 34 0.097
U41448-1|AAC26987.1| 115|Homo sapiens ribosomal protein S26 pro... 34 0.097
BC105798-1|AAI05799.1| 115|Homo sapiens ribosomal protein S26 p... 34 0.097
BC105276-1|AAI05277.1| 115|Homo sapiens ribosomal protein S26 p... 34 0.097
BC070220-1|AAH70220.1| 115|Homo sapiens ribosomal protein S26 p... 34 0.097
BC015832-1|AAH15832.1| 115|Homo sapiens ribosomal protein S26 p... 34 0.097
BC002604-1|AAH02604.1| 115|Homo sapiens ribosomal protein S26 p... 34 0.097
AL136526-7|CAI39559.1| 115|Homo sapiens protein ( for propionyl... 34 0.097
AC073072-2|AAS07540.1| 115|Homo sapiens unknown protein. 34 0.097
AB007161-1|BAA25824.1| 45|Homo sapiens ribosomal protein S26 p... 34 0.097
AL929401-1|CAI40435.1| 115|Homo sapiens ribosomal protein S26-l... 31 0.90
BC112343-1|AAI12344.1| 508|Homo sapiens SFRS12 protein protein. 28 4.8
BC067770-1|AAH67770.1| 508|Homo sapiens splicing factor, argini... 28 4.8
AF459094-1|AAL67778.1| 508|Homo sapiens splicing factor, argini... 28 4.8
AB209694-1|BAD92931.1| 206|Homo sapiens splicing factor, argini... 28 4.8
>X77770-1|CAA54808.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 33.9 bits (74), Expect = 0.097
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +2
Query: 11 HSKVVRNRSKKDRRIRTPP 67
HSKVVRNRS++ R+ RTPP
Sbjct: 80 HSKVVRNRSREARKDRTPP 98
>X69654-1|CAA49345.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 33.9 bits (74), Expect = 0.097
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +2
Query: 11 HSKVVRNRSKKDRRIRTPP 67
HSKVVRNRS++ R+ RTPP
Sbjct: 80 HSKVVRNRSREARKDRTPP 98
>U41448-1|AAC26987.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 33.9 bits (74), Expect = 0.097
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +2
Query: 11 HSKVVRNRSKKDRRIRTPP 67
HSKVVRNRS++ R+ RTPP
Sbjct: 80 HSKVVRNRSREARKDRTPP 98
>BC105798-1|AAI05799.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 33.9 bits (74), Expect = 0.097
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +2
Query: 11 HSKVVRNRSKKDRRIRTPP 67
HSKVVRNRS++ R+ RTPP
Sbjct: 80 HSKVVRNRSREARKDRTPP 98
>BC105276-1|AAI05277.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 33.9 bits (74), Expect = 0.097
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +2
Query: 11 HSKVVRNRSKKDRRIRTPP 67
HSKVVRNRS++ R+ RTPP
Sbjct: 80 HSKVVRNRSREARKDRTPP 98
>BC070220-1|AAH70220.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 33.9 bits (74), Expect = 0.097
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +2
Query: 11 HSKVVRNRSKKDRRIRTPP 67
HSKVVRNRS++ R+ RTPP
Sbjct: 80 HSKVVRNRSREARKDRTPP 98
>BC015832-1|AAH15832.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 33.9 bits (74), Expect = 0.097
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +2
Query: 11 HSKVVRNRSKKDRRIRTPP 67
HSKVVRNRS++ R+ RTPP
Sbjct: 80 HSKVVRNRSREARKDRTPP 98
>BC002604-1|AAH02604.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 33.9 bits (74), Expect = 0.097
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +2
Query: 11 HSKVVRNRSKKDRRIRTPP 67
HSKVVRNRS++ R+ RTPP
Sbjct: 80 HSKVVRNRSREARKDRTPP 98
>AL136526-7|CAI39559.1| 115|Homo sapiens protein ( for propionyl
Coenzyme A ).).
Length = 115
Score = 33.9 bits (74), Expect = 0.097
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +2
Query: 11 HSKVVRNRSKKDRRIRTPP 67
HSKVVRNRS++ R+ RTPP
Sbjct: 80 HSKVVRNRSREARKDRTPP 98
>AC073072-2|AAS07540.1| 115|Homo sapiens unknown protein.
Length = 115
Score = 33.9 bits (74), Expect = 0.097
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +2
Query: 11 HSKVVRNRSKKDRRIRTPP 67
HSKVVRNRS++ R+ RTPP
Sbjct: 80 HSKVVRNRSREARKDRTPP 98
>AB007161-1|BAA25824.1| 45|Homo sapiens ribosomal protein S26
protein.
Length = 45
Score = 33.9 bits (74), Expect = 0.097
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +2
Query: 11 HSKVVRNRSKKDRRIRTPP 67
HSKVVRNRS++ R+ RTPP
Sbjct: 19 HSKVVRNRSREARKDRTPP 37
>AL929401-1|CAI40435.1| 115|Homo sapiens ribosomal protein S26-like
1 protein.
Length = 115
Score = 30.7 bits (66), Expect = 0.90
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +2
Query: 11 HSKVVRNRSKKDRRIRTPP 67
HSKVVRNRS++ + RTPP
Sbjct: 80 HSKVVRNRSREACKDRTPP 98
>BC112343-1|AAI12344.1| 508|Homo sapiens SFRS12 protein protein.
Length = 508
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 14 SKVVRNRSKKDRRIRTPPKSNFPRDMSRPQAVQR 115
SK + + KKD++ RTPP+S SR + +R
Sbjct: 348 SKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRER 381
>BC067770-1|AAH67770.1| 508|Homo sapiens splicing factor,
arginine/serine-rich 12 protein.
Length = 508
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 14 SKVVRNRSKKDRRIRTPPKSNFPRDMSRPQAVQR 115
SK + + KKD++ RTPP+S SR + +R
Sbjct: 348 SKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRER 381
>AF459094-1|AAL67778.1| 508|Homo sapiens splicing factor,
arginine/serine-rich 12 protein.
Length = 508
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 14 SKVVRNRSKKDRRIRTPPKSNFPRDMSRPQAVQR 115
SK + + KKD++ RTPP+S SR + +R
Sbjct: 348 SKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRER 381
>AB209694-1|BAD92931.1| 206|Homo sapiens splicing factor,
arginine/serine-rich 12 variant protein.
Length = 206
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 14 SKVVRNRSKKDRRIRTPPKSNFPRDMSRPQAVQR 115
SK + + KKD++ RTPP+S SR + +R
Sbjct: 139 SKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRER 172
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,807,772
Number of Sequences: 237096
Number of extensions: 218319
Number of successful extensions: 872
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 872
length of database: 76,859,062
effective HSP length: 31
effective length of database: 69,509,086
effective search space used: 1390181720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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