Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc8b12
         (694 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    23   1.8  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   7.2  

>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 14/55 (25%), Positives = 28/55 (50%)
 Frame = +3

Query: 411 YLYL*INICTI*NISEYIIILYYVNLQMYTIVTHTYFFFQVYPYYLEPLPISMMH 575
           Y  + I + TI   S  + + +  N  MY   TH +FFF +   ++  + ++++H
Sbjct: 43  YFIIAIYVLTILTSSVTLHVCF--NSYMYAF-THIFFFFAICCDFIALIVVNIVH 94


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/26 (30%), Positives = 12/26 (46%)
 Frame = +3

Query: 462 IIILYYVNLQMYTIVTHTYFFFQVYP 539
           ++ +YY         TH Y  F +YP
Sbjct: 295 LLCIYYFCRAFIIFPTHFYCAFSLYP 320


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,104
Number of Sequences: 336
Number of extensions: 2999
Number of successful extensions: 3
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)