Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc8b12
         (694 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF487781-1|AAL96668.1|  533|Anopheles gambiae cytochrome P450 CY...    25   2.3  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    25   3.0  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    23   6.9  

>AF487781-1|AAL96668.1|  533|Anopheles gambiae cytochrome P450
           CYP9L1 protein protein.
          Length = 533

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +3

Query: 459 YIIILYYVNLQMYTIVTHTYFFFQVYP 539
           Y+I +  V + +Y  +TH   FF+ YP
Sbjct: 7   YVIGIVSVLVALYVYLTHNNDFFKKYP 33


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +3

Query: 72  LTSPQRKAPQIYKNIFSECL 131
           LT+  RK   I+K +F ECL
Sbjct: 447 LTAAIRKHTDIFKKLFQECL 466


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 13/33 (39%), Positives = 15/33 (45%)
 Frame = +1

Query: 31  GWWYLQVRTHNKVFLRVRREKPLRFTRTSFQNV 129
           G W L   TH K   R  R   LR   ++FQ V
Sbjct: 791 GRWVLDKETHRKSVQRAHRPGALR-VASAFQTV 822


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 639,428
Number of Sequences: 2352
Number of extensions: 11998
Number of successful extensions: 56
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 56
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)