Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc8b11
         (694 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         25   2.3  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         25   2.3  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    24   4.0  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          24   5.2  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    24   5.2  
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    23   9.1  

>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 13/47 (27%), Positives = 21/47 (44%)
 Frame = +2

Query: 242 SHPRDITPPPEAMSPRRERTLVEAHVVELGRRGSEGCETRGRTVRTP 382
           SHP+ I P P+  S  R  +L   + +    +    C + G +  TP
Sbjct: 205 SHPQPIVPQPQRASLERRDSLFRPYDIS---KSPRLCSSNGSSSATP 248


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 13/47 (27%), Positives = 21/47 (44%)
 Frame = +2

Query: 242 SHPRDITPPPEAMSPRRERTLVEAHVVELGRRGSEGCETRGRTVRTP 382
           SHP+ I P P+  S  R  +L   + +    +    C + G +  TP
Sbjct: 205 SHPQPIVPQPQRASLERRDSLFRPYDIS---KSPRLCSSNGSSSATP 248


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -3

Query: 497 SNTTSTRSPPTETWTS 450
           S   +TR+P T TWTS
Sbjct: 90  SRQRATRAPTTSTWTS 105


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +2

Query: 527  ESPTMPKKADEPHGLSQYSWTSAMPGAEPS 616
            E+P  P     P+GLS  + + A+P   P+
Sbjct: 1112 ETPAFPVTPRTPYGLSNGTSSPALPPKSPT 1141



 Score = 23.0 bits (47), Expect = 9.1
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = +2

Query: 374 RTPSVVVSDYSDGVAVGA 427
           RTP   VSDYS   A  A
Sbjct: 696 RTPLTAVSDYSPATAAAA 713


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -1

Query: 421 HCNSIRVVADNDTGRPDRTASC 356
           HC++  V+ +  TGR   T  C
Sbjct: 558 HCDTNNVMTEEQTGRRKNTQGC 579


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 286 RRHGLRWRGNIAWMRVPPKP 227
           R+  LRW   +  M VPP+P
Sbjct: 351 RKTRLRWMMEMPGMSVPPQP 370


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 647,687
Number of Sequences: 2352
Number of extensions: 11213
Number of successful extensions: 98
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 98
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)