Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc8b11
         (694 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC146811-1|AAI46812.1|  854|Homo sapiens ZNF341 protein protein.       31   5.2  
BC132873-1|AAI32874.1|  854|Homo sapiens ZNF341 protein protein.       31   5.2  
AL050349-3|CAI21796.2|  847|Homo sapiens zinc finger protein 341...    31   5.2  
AF039696-1|AAC18045.1|  195|Homo sapiens antigen NY-CO-28 protein.     30   9.0  

>BC146811-1|AAI46812.1|  854|Homo sapiens ZNF341 protein protein.
          Length = 854

 Score = 30.7 bits (66), Expect = 5.2
 Identities = 14/39 (35%), Positives = 24/39 (61%)
 Frame = +3

Query: 537 RCQKRQTSLMDSHSTHGRQQCQGQSQAAAYLLILPTSLF 653
           +C+K+  SL  +  TH R+QCQG + A A + +   S++
Sbjct: 57  KCKKQFNSL-PAFMTHKREQCQGNAPALATVSLATNSIY 94


>BC132873-1|AAI32874.1|  854|Homo sapiens ZNF341 protein protein.
          Length = 854

 Score = 30.7 bits (66), Expect = 5.2
 Identities = 14/39 (35%), Positives = 24/39 (61%)
 Frame = +3

Query: 537 RCQKRQTSLMDSHSTHGRQQCQGQSQAAAYLLILPTSLF 653
           +C+K+  SL  +  TH R+QCQG + A A + +   S++
Sbjct: 57  KCKKQFNSL-PAFMTHKREQCQGNAPALATVSLATNSIY 94


>AL050349-3|CAI21796.2|  847|Homo sapiens zinc finger protein 341
           protein.
          Length = 847

 Score = 30.7 bits (66), Expect = 5.2
 Identities = 14/39 (35%), Positives = 24/39 (61%)
 Frame = +3

Query: 537 RCQKRQTSLMDSHSTHGRQQCQGQSQAAAYLLILPTSLF 653
           +C+K+  SL  +  TH R+QCQG + A A + +   S++
Sbjct: 57  KCKKQFNSL-PAFMTHKREQCQGNAPALATVSLATNSIY 94


>AF039696-1|AAC18045.1|  195|Homo sapiens antigen NY-CO-28 protein.
          Length = 195

 Score = 29.9 bits (64), Expect = 9.0
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = +1

Query: 268 TGGHVAETGEDSRRGACGRAGQKRQRR 348
           TG H  E G   +RGA GR G++ QRR
Sbjct: 115 TGEHRRERGGREQRGADGRRGRRGQRR 141


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,926,968
Number of Sequences: 237096
Number of extensions: 1825868
Number of successful extensions: 6816
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6350
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6816
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)