Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc8b10
(704 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EU019710-1|ABU25222.1| 475|Tribolium castaneum dopa decarboxyla... 27 0.20
AJ845188-1|CAH60165.1| 517|Tribolium castaneum putative esteras... 25 0.60
AJ845187-1|CAH60164.1| 515|Tribolium castaneum esterase protein. 25 0.60
AJ844897-1|CAH59956.1| 517|Tribolium castaneum esterase protein. 25 0.60
AJ845189-1|CAH60166.1| 515|Tribolium castaneum putative esteras... 24 1.0
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 22 4.2
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 22 4.2
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 22 4.2
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 22 4.2
U63132-1|AAB38392.1| 372|Tribolium castaneum decapentaplegic pr... 22 5.6
AM292323-1|CAL23135.2| 587|Tribolium castaneum gustatory recept... 22 5.6
U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein. 21 7.4
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 21 7.4
DQ342040-1|ABC69932.1| 822|Tribolium castaneum STIP protein. 21 7.4
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 21 7.4
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 21 7.4
>EU019710-1|ABU25222.1| 475|Tribolium castaneum dopa decarboxylase
protein.
Length = 475
Score = 26.6 bits (56), Expect = 0.20
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +3
Query: 564 SVPTLRRSLYNGSGLCLGAVWICGPALTK 650
S P + + +G+ C+G WI PA T+
Sbjct: 85 SYPAIVADILSGAIACIGFSWIASPACTE 113
>AJ845188-1|CAH60165.1| 517|Tribolium castaneum putative esterase
protein.
Length = 517
Score = 25.0 bits (52), Expect = 0.60
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -2
Query: 310 LLMKNAYWLSELIFPITNPMNTRQFPITDK*KSIEDKI 197
L+ + Y+L ++IF I T +FPI S+E K+
Sbjct: 372 LIHTDTYFLRDIIFAIRQHAVTAKFPIYLYRMSVETKL 409
>AJ845187-1|CAH60164.1| 515|Tribolium castaneum esterase protein.
Length = 515
Score = 25.0 bits (52), Expect = 0.60
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -2
Query: 310 LLMKNAYWLSELIFPITNPMNTRQFPITDK*KSIEDKI 197
L+ + Y+L ++IF I T +FPI S+E K+
Sbjct: 370 LIHTDTYFLRDIIFAIRQHAITAKFPIYLYRMSVETKL 407
>AJ844897-1|CAH59956.1| 517|Tribolium castaneum esterase protein.
Length = 517
Score = 25.0 bits (52), Expect = 0.60
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -2
Query: 310 LLMKNAYWLSELIFPITNPMNTRQFPITDK*KSIEDKI 197
L+ + Y+L ++IF I T +FPI S+E K+
Sbjct: 372 LIHTDTYFLRDIIFAIRQHAITAKFPIYLYRMSVETKL 409
>AJ845189-1|CAH60166.1| 515|Tribolium castaneum putative esterase
protein.
Length = 515
Score = 24.2 bits (50), Expect = 1.0
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -2
Query: 310 LLMKNAYWLSELIFPITNPMNTRQFPITDK*KSIEDKI 197
L+ + Y+L ++IF I T +FPI S+E K+
Sbjct: 370 LIHTDTYFLRDIIFAIRQHAVTAKFPIYLYRISVETKL 407
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 22.2 bits (45), Expect = 4.2
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = +2
Query: 596 WLWAMSWSSLDMWT 637
WL + +W +L +WT
Sbjct: 470 WLLSQTWITLHIWT 483
Score = 21.0 bits (42), Expect = 9.8
Identities = 10/42 (23%), Positives = 23/42 (54%)
Frame = +3
Query: 225 SVIGNCLVFIGFVIGKINSDNQYAFFISNLLILLGHLVALMT 350
+++ NC+ F+ V+G ++ N+ + ++I L + A T
Sbjct: 198 AMLTNCICFVPGVLGLLSRSNKESQRFLKVIIDLFAIAAQAT 239
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 22.2 bits (45), Expect = 4.2
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = +2
Query: 596 WLWAMSWSSLDMWT 637
WL + +W +L +WT
Sbjct: 470 WLLSQTWITLHIWT 483
Score = 21.0 bits (42), Expect = 9.8
Identities = 10/42 (23%), Positives = 23/42 (54%)
Frame = +3
Query: 225 SVIGNCLVFIGFVIGKINSDNQYAFFISNLLILLGHLVALMT 350
+++ NC+ F+ V+G ++ N+ + ++I L + A T
Sbjct: 198 AMLTNCICFVPGVLGLLSRSNKESQRFLKVIIDLFAIAAQAT 239
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 22.2 bits (45), Expect = 4.2
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = +2
Query: 596 WLWAMSWSSLDMWT 637
WL + +W +L +WT
Sbjct: 470 WLLSQTWITLHIWT 483
Score = 21.0 bits (42), Expect = 9.8
Identities = 10/42 (23%), Positives = 23/42 (54%)
Frame = +3
Query: 225 SVIGNCLVFIGFVIGKINSDNQYAFFISNLLILLGHLVALMT 350
+++ NC+ F+ V+G ++ N+ + ++I L + A T
Sbjct: 198 AMLTNCICFVPGVLGLLSRSNKESQRFLKVIIDLFAIAAQAT 239
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 22.2 bits (45), Expect = 4.2
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = +2
Query: 596 WLWAMSWSSLDMWT 637
WL + +W +L +WT
Sbjct: 470 WLLSQTWITLHIWT 483
Score = 21.0 bits (42), Expect = 9.8
Identities = 10/42 (23%), Positives = 23/42 (54%)
Frame = +3
Query: 225 SVIGNCLVFIGFVIGKINSDNQYAFFISNLLILLGHLVALMT 350
+++ NC+ F+ V+G ++ N+ + ++I L + A T
Sbjct: 198 AMLTNCICFVPGVLGLLSRSNKESQRFLKVIIDLFAIAAQAT 239
>U63132-1|AAB38392.1| 372|Tribolium castaneum decapentaplegic
protein protein.
Length = 372
Score = 21.8 bits (44), Expect = 5.6
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = -2
Query: 703 KEFDDLRERRDVQSVQPHLVRAGPHIQTAPRH 608
+ F + D + V PH R +I + PRH
Sbjct: 86 RSFTHVESPIDEKFVHPHRFRLKFNISSIPRH 117
>AM292323-1|CAL23135.2| 587|Tribolium castaneum gustatory receptor
candidate 2 protein.
Length = 587
Score = 21.8 bits (44), Expect = 5.6
Identities = 8/23 (34%), Positives = 17/23 (73%)
Frame = +3
Query: 195 IILSSIDFYLSVIGNCLVFIGFV 263
+ILS +D+++ ++ + LV I F+
Sbjct: 390 LILSFVDYFVFLLCSILVNIAFI 412
>U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein.
Length = 283
Score = 21.4 bits (43), Expect = 7.4
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -3
Query: 534 RIHLVHYSNSTFTFVRFPYRNSFLYTR 454
++H+ SN TF P R YTR
Sbjct: 216 KVHVAGASNGTFAPGMEPKRQRTAYTR 242
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 21.4 bits (43), Expect = 7.4
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -3
Query: 534 RIHLVHYSNSTFTFVRFPYRNSFLYTR 454
++H+ SN TF P R YTR
Sbjct: 216 KVHVAGASNGTFAPGMEPKRQRTAYTR 242
>DQ342040-1|ABC69932.1| 822|Tribolium castaneum STIP protein.
Length = 822
Score = 21.4 bits (43), Expect = 7.4
Identities = 5/10 (50%), Positives = 6/10 (60%)
Frame = +2
Query: 596 WLWAMSWSSL 625
W W M WS +
Sbjct: 629 WYWVMDWSDM 638
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 21.4 bits (43), Expect = 7.4
Identities = 10/40 (25%), Positives = 21/40 (52%)
Frame = +1
Query: 514 IVH*MNPLVCDLSDAIEVYLPYVGHCIMALGYVLEQFGYV 633
++H ++ CD D IE++ + + L ++L+ G V
Sbjct: 1396 LIHKIDAQDCDFVDEIEMFSMFERFHVNKLHFLLQIIGGV 1435
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 21.4 bits (43), Expect = 7.4
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -3
Query: 534 RIHLVHYSNSTFTFVRFPYRNSFLYTR 454
++H+ SN TF P R YTR
Sbjct: 216 KVHVAGASNGTFAPGMEPKRQRTAYTR 242
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,421
Number of Sequences: 336
Number of extensions: 4020
Number of successful extensions: 26
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -