Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc8b10
         (704 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase...    27   0.43 
AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase...    27   0.43 
AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...    25   1.8  
M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    24   5.4  

>AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase
           isoform 2 protein.
          Length = 484

 Score = 27.5 bits (58), Expect = 0.43
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +3

Query: 564 SVPTLRRSLYNGSGLCLGAVWICGPALTK 650
           S P +   + +G+  C+G  WI  PA T+
Sbjct: 95  SYPAIVADMLSGAIACIGFTWIASPACTE 123


>AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase
           isoform 1 protein.
          Length = 515

 Score = 27.5 bits (58), Expect = 0.43
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +3

Query: 564 SVPTLRRSLYNGSGLCLGAVWICGPALTK 650
           S P +   + +G+  C+G  WI  PA T+
Sbjct: 126 SYPAIVADMLSGAIACIGFTWIASPACTE 154


>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
            symporter protein.
          Length = 1127

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = +1

Query: 127  SCELRLFPKCHRPTDVNYEQ 186
            SC+LR+F   +R T++ +EQ
Sbjct: 971  SCKLRVFALANRKTELEFEQ 990


>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 15/49 (30%), Positives = 27/49 (55%)
 Frame = +2

Query: 104 NNRLL*YLVVSCDYFQNATDQRMSTTNKAQDYFVFYRLLLISNRKLSSI 250
           NN+LL +L  +C+ F+N T+  +++   A    V   +L   +  LSS+
Sbjct: 78  NNQLL-WLCKNCNEFRNGTNSLLTSEIAALLELVKAEILTTIDSSLSSL 125


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 752,254
Number of Sequences: 2352
Number of extensions: 14838
Number of successful extensions: 20
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71922660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)