Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc8b10
         (704 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-761|AAF47837.1|  454|Drosophila melanogaster CG14995-PA...    32   0.87 
AY058468-1|AAL13697.1|  439|Drosophila melanogaster GH27361p pro...    30   2.7  
AE014296-2939|AAF49320.2|  439|Drosophila melanogaster CG7497-PA...    30   2.7  

>AE014296-761|AAF47837.1|  454|Drosophila melanogaster CG14995-PA,
           isoform A protein.
          Length = 454

 Score = 31.9 bits (69), Expect = 0.87
 Identities = 22/74 (29%), Positives = 29/74 (39%)
 Frame = -2

Query: 670 VQSVQPHLVRAGPHIQTAPRHSPEPLYNDLRKVGTLL*HQIDHTLKDSFSALFKFHIHVR 491
           VQ+ QP      P     P H P P+YN + K      HQ D +      +    +  VR
Sbjct: 233 VQAAQPLKGSQPPTPTKEPVHPPSPMYNTITKEQRTSYHQYDRSPGSDQESSPHTYREVR 292

Query: 490 TFSIPKFISLYSPK 449
               P  IS +S K
Sbjct: 293 PTPFPPSISAHSMK 306


>AY058468-1|AAL13697.1|  439|Drosophila melanogaster GH27361p
           protein.
          Length = 439

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
 Frame = +3

Query: 192 RIILSSIDFYLSVIGNCLVFIGFVIGKINSDNQYAFFISNLLILLGHLVALMTEL-TTLY 368
           R+I+  I   L V GN L        K+N +++Y   +    +   +LVAL+  L TTL 
Sbjct: 58  RLIIGVIIMVLGVFGNSLALFILARKKLNKNSKYTLMLR--CLATNNLVALLGMLTTTLL 115

Query: 369 EDYL 380
           + YL
Sbjct: 116 KMYL 119


>AE014296-2939|AAF49320.2|  439|Drosophila melanogaster CG7497-PA
           protein.
          Length = 439

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
 Frame = +3

Query: 192 RIILSSIDFYLSVIGNCLVFIGFVIGKINSDNQYAFFISNLLILLGHLVALMTEL-TTLY 368
           R+I+  I   L V GN L        K+N +++Y   +    +   +LVAL+  L TTL 
Sbjct: 58  RLIIGVIIMVLGVFGNSLALFILARKKLNKNSKYTLMLR--CLATNNLVALLGMLTTTLL 115

Query: 369 EDYL 380
           + YL
Sbjct: 116 KMYL 119


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,585,164
Number of Sequences: 53049
Number of extensions: 661829
Number of successful extensions: 1412
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1368
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1409
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3108380451
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)