Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc8b08
(733 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_39478| Best HMM Match : No HMM Matches (HMM E-Value=.) 137 1e-32
SB_36597| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07) 60 2e-09
SB_30389| Best HMM Match : Helicase_C (HMM E-Value=3.3e-21) 50 1e-06
SB_7987| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_57688| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08) 49 3e-06
SB_30093| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08) 49 3e-06
SB_14063| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08) 49 3e-06
SB_44019| Best HMM Match : TPR_2 (HMM E-Value=4.9e-12) 47 2e-05
SB_20056| Best HMM Match : zf-C3HC4 (HMM E-Value=9e-11) 46 3e-05
SB_16517| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-07) 46 4e-05
SB_20851| Best HMM Match : Cbl_N3 (HMM E-Value=0) 45 7e-05
SB_51713| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04
SB_26589| Best HMM Match : DUF477 (HMM E-Value=5.2e-18) 43 3e-04
SB_44886| Best HMM Match : zf-C3HC4 (HMM E-Value=1.3e-06) 42 4e-04
SB_43903| Best HMM Match : FHA (HMM E-Value=4.6e-13) 42 4e-04
SB_56584| Best HMM Match : zf-C3HC4 (HMM E-Value=1.3e-06) 42 5e-04
SB_30772| Best HMM Match : zf-C3HC4 (HMM E-Value=2.4e-09) 41 0.001
SB_18658| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_24395| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_11042| Best HMM Match : zf-C3HC4 (HMM E-Value=0.00013) 41 0.001
SB_8394| Best HMM Match : zf-C3HC4 (HMM E-Value=8.6e-08) 41 0.001
SB_56644| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07) 40 0.002
SB_30107| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07) 40 0.002
SB_18584| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_39287| Best HMM Match : NHL (HMM E-Value=1.5e-21) 40 0.002
SB_3354| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_38572| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0034) 39 0.004
SB_22201| Best HMM Match : zf-C3HC4 (HMM E-Value=8.1e-10) 39 0.005
SB_27080| Best HMM Match : zf-C3HC4 (HMM E-Value=8.1e-10) 39 0.005
SB_18255| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.005
SB_54221| Best HMM Match : zf-B_box (HMM E-Value=2.1e-17) 38 0.008
SB_26592| Best HMM Match : zf-B_box (HMM E-Value=1.3e-18) 38 0.008
SB_6628| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09) 38 0.008
SB_46701| Best HMM Match : zf-B_box (HMM E-Value=1.4e-17) 38 0.011
SB_21628| Best HMM Match : zf-B_box (HMM E-Value=1.4e-17) 38 0.011
SB_47995| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09) 38 0.011
SB_43880| Best HMM Match : zf-B_box (HMM E-Value=5.1e-15) 38 0.011
SB_11572| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.011
SB_6802| Best HMM Match : zf-B_box (HMM E-Value=5e-18) 38 0.011
SB_28248| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10) 37 0.015
SB_6888| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.015
SB_57045| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.015
SB_53640| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10) 37 0.015
SB_51226| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09) 37 0.015
SB_48731| Best HMM Match : zf-C3HC4 (HMM E-Value=6.5e-08) 37 0.015
SB_48027| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10) 37 0.015
SB_22421| Best HMM Match : zf-B_box (HMM E-Value=4e-17) 37 0.015
SB_9017| Best HMM Match : zf-C3HC4 (HMM E-Value=7.9e-12) 37 0.015
SB_12329| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.019
SB_16819| Best HMM Match : BIR (HMM E-Value=7.5e-30) 37 0.019
SB_57762| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.026
SB_18515| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.026
SB_5620| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.026
SB_4090| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.026
SB_50665| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.034
SB_41431| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.034
SB_38753| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.034
SB_38368| Best HMM Match : zf-C3HC4 (HMM E-Value=4.4e-15) 36 0.034
SB_35560| Best HMM Match : zf-B_box (HMM E-Value=1e-20) 36 0.034
SB_29221| Best HMM Match : zf-C3HC4 (HMM E-Value=7.5e-10) 36 0.034
SB_23299| Best HMM Match : zf-C3HC4 (HMM E-Value=5.9e-06) 36 0.034
SB_22842| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.034
SB_4835| Best HMM Match : WWE (HMM E-Value=3.7e-19) 36 0.034
SB_37786| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.045
SB_25082| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.045
SB_11979| Best HMM Match : zf-C3HC4 (HMM E-Value=0.061) 36 0.045
SB_8282| Best HMM Match : NHL (HMM E-Value=9.2e-23) 36 0.045
SB_2107| Best HMM Match : zf-B_box (HMM E-Value=3.9e-08) 35 0.059
SB_24514| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.059
SB_18762| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.059
SB_59028| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-05) 35 0.078
SB_40057| Best HMM Match : zf-B_box (HMM E-Value=1.4e-08) 35 0.078
SB_29995| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-05) 35 0.078
SB_944| Best HMM Match : zf-B_box (HMM E-Value=6.7e-15) 35 0.078
SB_13725| Best HMM Match : zf-B_box (HMM E-Value=6e-14) 34 0.10
SB_33568| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.10
SB_384| Best HMM Match : IBR (HMM E-Value=1.1e-12) 34 0.10
SB_37011| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.14
SB_27455| Best HMM Match : Extensin_2 (HMM E-Value=0.75) 34 0.14
SB_3322| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_56142| Best HMM Match : zf-B_box (HMM E-Value=2.9e-10) 33 0.24
SB_52170| Best HMM Match : zf-C3HC4 (HMM E-Value=7.4e-08) 33 0.24
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.24
SB_4488| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.24
SB_27532| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.32
SB_14837| Best HMM Match : UCH (HMM E-Value=1.10002e-42) 33 0.32
SB_23934| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-07) 33 0.32
SB_57365| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.42
SB_13054| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.42
SB_11289| Best HMM Match : zf-TRAF (HMM E-Value=1.7e-08) 32 0.42
SB_24396| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.55
SB_904| Best HMM Match : zf-C3HC4 (HMM E-Value=7.4e-08) 32 0.55
SB_31692| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.73
SB_33822| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0022) 31 0.73
SB_42290| Best HMM Match : Band_41 (HMM E-Value=3.6e-09) 31 0.96
SB_31765| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.96
SB_22639| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.96
SB_7109| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0029) 31 0.96
SB_55125| Best HMM Match : zf-C2HC (HMM E-Value=1.5e-13) 31 0.96
SB_41147| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_41628| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_39493| Best HMM Match : zf-TRAF (HMM E-Value=1.5e-09) 31 1.3
SB_24485| Best HMM Match : zf-CCCH (HMM E-Value=3e-09) 30 1.7
SB_19782| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_37872| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_59357| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_37345| Best HMM Match : zf-B_box (HMM E-Value=1.3e-23) 30 2.2
SB_35671| Best HMM Match : zf-C3HC4 (HMM E-Value=0.01) 30 2.2
SB_32934| Best HMM Match : K_tetra (HMM E-Value=7.79963e-42) 30 2.2
SB_53581| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_49946| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4) 29 2.9
SB_14351| Best HMM Match : zf-B_box (HMM E-Value=2.3e-12) 29 2.9
SB_106| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_50209| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_3579| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_52129| Best HMM Match : Sec23_trunk (HMM E-Value=0) 29 3.9
SB_23642| Best HMM Match : Neuromodulin (HMM E-Value=4.7) 29 3.9
SB_54202| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_40458| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_34466| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_16508| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_10780| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_31352| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_48235| Best HMM Match : zf-C3HC4 (HMM E-Value=0.12) 28 6.8
SB_41371| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_12595| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_51720| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_26397| Best HMM Match : zf-C3HC4 (HMM E-Value=0.78) 28 6.8
SB_58524| Best HMM Match : Ank (HMM E-Value=3.4e-16) 28 9.0
SB_30956| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
SB_38560| Best HMM Match : zf-C3HC4 (HMM E-Value=3.1) 28 9.0
SB_37498| Best HMM Match : MATH (HMM E-Value=1.8e-28) 28 9.0
SB_29658| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0012) 28 9.0
SB_5871| Best HMM Match : IBR (HMM E-Value=0.00018) 28 9.0
>SB_39478| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 254
Score = 137 bits (331), Expect = 1e-32
Identities = 54/69 (78%), Positives = 64/69 (92%)
Frame = +2
Query: 206 ECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAISREKVIPLYGRGNT 385
ECNICLDTARDAV+SMCGHLFCWPCLH+WLETRP+R +CPVCKA IS+EKVIPL+GRG++
Sbjct: 62 ECNICLDTARDAVISMCGHLFCWPCLHRWLETRPNRSMCPVCKAGISKEKVIPLFGRGSS 121
Query: 386 KQEDPRNKV 412
+DPR+ V
Sbjct: 122 SNQDPRHLV 130
>SB_36597| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07)
Length = 346
Score = 59.7 bits (138), Expect = 2e-09
Identities = 25/62 (40%), Positives = 39/62 (62%)
Frame = +2
Query: 185 KHDERMLECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAISREKVIP 364
K D+ +L CNIC+ +A+ ++CGH FC CL WL +RP Q CP C++ + +IP
Sbjct: 11 KIDQNLL-CNICVGVLENAITTICGHSFCESCLETWL-SRPEVQSCPSCRSHVLSLDLIP 68
Query: 365 LY 370
++
Sbjct: 69 VH 70
>SB_30389| Best HMM Match : Helicase_C (HMM E-Value=3.3e-21)
Length = 380
Score = 50.4 bits (115), Expect = 1e-06
Identities = 21/78 (26%), Positives = 40/78 (51%)
Frame = +2
Query: 206 ECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAISREKVIPLYGRGNT 385
EC ICLD D ++ C H+FC CL +E CP+C+A +++ +++ +
Sbjct: 64 ECPICLDPLDDPSITRCAHVFCTGCLTDVIENEGLAPRCPMCRAPVNQNELVKVPEERLR 123
Query: 386 KQEDPRNKVPPRPAGQRT 439
++E + AG+++
Sbjct: 124 EKETEKEGGKEETAGRKS 141
>SB_7987| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 466
Score = 49.2 bits (112), Expect = 3e-06
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = +2
Query: 209 CNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAIS 346
C IC + + + C H FC C+ +WL+ ++ CPVCKA+IS
Sbjct: 160 CAICKEVLTQPIATPCDHYFCVLCICEWLDQTYNKSGCPVCKASIS 205
>SB_57688| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08)
Length = 262
Score = 49.2 bits (112), Expect = 3e-06
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = +2
Query: 209 CNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAIS 346
C IC + + + C H FC C+ +WL+ ++ CPVCKA+IS
Sbjct: 34 CAICKEVLTQPIATPCDHYFCVLCICEWLDQTYNKSGCPVCKASIS 79
>SB_30093| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08)
Length = 301
Score = 49.2 bits (112), Expect = 3e-06
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = +2
Query: 209 CNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAIS 346
C IC + + + C H FC C+ +WL+ ++ CPVCKA+IS
Sbjct: 160 CAICKEVLTQPIATPCDHYFCVLCICEWLDQTYNKSGCPVCKASIS 205
>SB_14063| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08)
Length = 301
Score = 49.2 bits (112), Expect = 3e-06
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = +2
Query: 209 CNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAIS 346
C IC + + + C H FC C+ +WL+ ++ CPVCKA+IS
Sbjct: 160 CAICKEVLTQPIATPCDHYFCVLCICEWLDQTYNKSGCPVCKASIS 205
>SB_44019| Best HMM Match : TPR_2 (HMM E-Value=4.9e-12)
Length = 654
Score = 46.8 bits (106), Expect = 2e-05
Identities = 17/54 (31%), Positives = 33/54 (61%)
Frame = +2
Query: 206 ECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAISREKVIPL 367
EC +C + V + CGH+FC CL++ L+ RP CP+C++++++ + +
Sbjct: 378 ECTLCCRLFYNPVTTPCGHVFCRACLNRSLDHRPG---CPICRSSLTQNVTVAI 428
>SB_20056| Best HMM Match : zf-C3HC4 (HMM E-Value=9e-11)
Length = 471
Score = 46.0 bits (104), Expect = 3e-05
Identities = 18/48 (37%), Positives = 29/48 (60%)
Frame = +2
Query: 206 ECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAISR 349
EC +C + + V S+CGH FC CL++ L+ R CP C+A +++
Sbjct: 329 ECKLCFNLLLEPVTSLCGHSFCRDCLYRSLDHRVE---CPCCRAPLTK 373
Score = 34.7 bits (76), Expect = 0.078
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 197 RMLECNICLDTARDAVVSMCGHLFCWPCL 283
R EC +C D D V +CGH +C C+
Sbjct: 18 RFFECGLCGDFYVDPVTILCGHTYCLACI 46
>SB_16517| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-07)
Length = 306
Score = 45.6 bits (103), Expect = 4e-05
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Frame = +2
Query: 185 KHDERMLECNICLDTARDAVVSMCGHLFCWPCLHQWL-----ETRPSRQVCPVCKAAISR 349
K D +L C IC + AV++ CGH FC CL W+ E CP C+A + +
Sbjct: 11 KVDPNLL-CGICAEVLERAVLTPCGHSFCGVCLETWMNAKLEENEKCPASCPSCRADLYQ 69
Query: 350 EKVIPL 367
IP+
Sbjct: 70 GDTIPV 75
>SB_20851| Best HMM Match : Cbl_N3 (HMM E-Value=0)
Length = 695
Score = 44.8 bits (101), Expect = 7e-05
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = +2
Query: 209 CNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAI 343
C IC + +D + CGHL C CL QW E CP C++ I
Sbjct: 185 CKICAENNKDVRIEPCGHLMCHLCLEQWQE--KGGDGCPFCRSPI 227
>SB_51713| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 43.6 bits (98), Expect = 2e-04
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = +2
Query: 209 CNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKA 337
C IC + +D + CGHL C CL QW E CP C++
Sbjct: 381 CKICAENNKDVRIEPCGHLMCHLCLEQWQE--KGGDGCPFCRS 421
>SB_26589| Best HMM Match : DUF477 (HMM E-Value=5.2e-18)
Length = 398
Score = 42.7 bits (96), Expect = 3e-04
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = +2
Query: 209 CNICLDTARDAVVS---MCGHLFCWPCLHQWLETRPSRQVCPVCKAAISR 349
C ICL+ + +CGH +C PCL +WLE + CP+C+ SR
Sbjct: 262 CPICLEEFTPETPTRLLVCGHKYCEPCLSRWLE---NNTTCPICRKPTSR 308
>SB_44886| Best HMM Match : zf-C3HC4 (HMM E-Value=1.3e-06)
Length = 406
Score = 42.3 bits (95), Expect = 4e-04
Identities = 20/61 (32%), Positives = 30/61 (49%)
Frame = +2
Query: 188 HDERMLECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAISREKVIPL 367
H R L C C +DA+++ C H+FC+ CL +TR ++ CP C A +
Sbjct: 348 HQAR-LTCPCCNTRKKDAILTKCFHVFCYECLKTRYDTR--QRKCPKCNATFGSNDFHKM 404
Query: 368 Y 370
Y
Sbjct: 405 Y 405
>SB_43903| Best HMM Match : FHA (HMM E-Value=4.6e-13)
Length = 553
Score = 42.3 bits (95), Expect = 4e-04
Identities = 18/55 (32%), Positives = 24/55 (43%)
Frame = +2
Query: 194 ERMLECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAISREKV 358
E C +C + A C H FC CL WL R CP+C+ A+ + V
Sbjct: 366 EDEFSCIVCQELFIRATTLTCSHSFCEYCLQSWLR---KRNTCPICRCAVQSQPV 417
>SB_56584| Best HMM Match : zf-C3HC4 (HMM E-Value=1.3e-06)
Length = 158
Score = 41.9 bits (94), Expect = 5e-04
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = +2
Query: 203 LECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAISREKVIPLY 370
L C C +DA+++ C H+FC+ CL +TR ++ CP C A +Y
Sbjct: 104 LTCPCCNTRKKDAILTKCFHVFCYECLKTRYDTR--QRKCPKCNATFGSNDFHKMY 157
>SB_30772| Best HMM Match : zf-C3HC4 (HMM E-Value=2.4e-09)
Length = 207
Score = 41.1 bits (92), Expect = 0.001
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = +2
Query: 203 LECNICLDTARDA-VVSMCGHLFCWPCLHQWLETRPSRQVCPVC--KAAISREKV 358
L C++C + D ++ C H FC CLH+ L R CP+C K A+ R V
Sbjct: 66 LRCSVCYEVFSDPRTLTACLHSFCKECLHKMLSKRSKYIHCPLCRKKTAVPRRGV 120
>SB_18658| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 337
Score = 41.1 bits (92), Expect = 0.001
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +2
Query: 206 ECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPV-C-KAAISREKVIP 364
+C IC D +V+ CGH+FC CL W+ CP+ C + AI K IP
Sbjct: 56 KCGICFGVLEDPLVTTCGHVFCSQCLVHWI---AENGTCPLTCEQLAIDDLKKIP 107
>SB_24395| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 887
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +2
Query: 191 DERMLECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAI 343
D L C IC +T + V C H FC CL + + ++ VCP C+ ++
Sbjct: 11 DHYRLVCGICQETYNNPKVLPCLHSFCQNCLDKSIRSQERVLVCPTCQCSV 61
>SB_11042| Best HMM Match : zf-C3HC4 (HMM E-Value=0.00013)
Length = 499
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = +2
Query: 185 KHDERMLECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAISREKVIP 364
+H +L C+IC+ VV+ C +FC C+ WL + C C++ + + P
Sbjct: 324 EHLVSILVCSICMGVPSTPVVTQCDQIFCSGCITAWLR---NAGACSSCRSVLEVSDIDP 380
Query: 365 LYG 373
L G
Sbjct: 381 LKG 383
>SB_8394| Best HMM Match : zf-C3HC4 (HMM E-Value=8.6e-08)
Length = 1631
Score = 40.7 bits (91), Expect = 0.001
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +2
Query: 203 LECNICLDTARDAVV-SMCGHLFCWPCLHQWLETRPSRQVCPVCKA 337
+ C +CL+ + +V CGH C CL + P +CPVC++
Sbjct: 21 ISCPVCLEVFEEPLVLPSCGHSVCLQCLQNMTKRNPPSLLCPVCRS 66
>SB_56644| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07)
Length = 858
Score = 40.3 bits (90), Expect = 0.002
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +2
Query: 206 ECNICLDTAR-DAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCK 334
EC ICL+T + CGH FC PC+ E S ++CP C+
Sbjct: 677 ECPICLETITYPETLQGCGHTFCRPCI---TEASKSSKLCPTCR 717
>SB_30107| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07)
Length = 911
Score = 40.3 bits (90), Expect = 0.002
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +2
Query: 206 ECNICLDTAR-DAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCK 334
EC ICL+T + CGH FC PC+ E S ++CP C+
Sbjct: 752 ECPICLETITYPETLQGCGHTFCRPCI---TEASKSSKLCPTCR 792
>SB_18584| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1022
Score = 40.3 bits (90), Expect = 0.002
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +2
Query: 209 CNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKA 337
C +C +T D V+ C H FC C+ + + R + VCP C+A
Sbjct: 405 CGVCRETYTDPRVAPCLHSFCKECVTKLVTERQGKFVCPDCQA 447
>SB_39287| Best HMM Match : NHL (HMM E-Value=1.5e-21)
Length = 645
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +2
Query: 203 LECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAIS 346
L C++CL+ R+ + C H FC CL + ++ +CP C+ S
Sbjct: 20 LTCSVCLEQFREPKMLPCFHTFCKECLEKTKQSFRGNLLCPTCRTKTS 67
>SB_3354| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 632
Score = 39.1 bits (87), Expect = 0.004
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +2
Query: 194 ERMLECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQ--VCPVCKAAISR 349
E +L C C + ++ ++ C H FC CL++ +RP + CP CK I +
Sbjct: 11 EELLTCRQCSNVFKNPRITPCLHSFCAECLNEIARSRPYQAYIACPTCKYEIRK 64
>SB_38572| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0034)
Length = 671
Score = 39.1 bits (87), Expect = 0.004
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +2
Query: 221 LDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAISREKVI 361
L+ ++ VV H+FC PCL WL T + CP C+ I++++ +
Sbjct: 107 LEKVKEPVVCPNQHVFCSPCLDLWLRT---NRYCPTCRTPINQDQPV 150
>SB_22201| Best HMM Match : zf-C3HC4 (HMM E-Value=8.1e-10)
Length = 604
Score = 38.7 bits (86), Expect = 0.005
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = +2
Query: 209 CNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQV-CPVC--KAAISREKV 358
C++CL+ +D V C H +C CL +E R V CP C K IS E+V
Sbjct: 17 CSLCLEQYQDPRVLACLHTYCRHCLESLVEHSQERTVSCPQCREKIVISVEEV 69
>SB_27080| Best HMM Match : zf-C3HC4 (HMM E-Value=8.1e-10)
Length = 462
Score = 38.7 bits (86), Expect = 0.005
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = +2
Query: 209 CNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQV-CPVC--KAAISREKV 358
C++CL+ +D V C H +C CL +E R V CP C K IS E+V
Sbjct: 17 CSLCLEQYQDPRVLACLHTYCRHCLESLVEHSQERTVSCPQCREKIVISVEEV 69
>SB_18255| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1457
Score = 38.7 bits (86), Expect = 0.005
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +2
Query: 251 MCGHLFCWPCLHQWLETRPSRQVCPVCKAAISREKVI 361
MCG +FC C + W+ T SR++ VC+ + +K I
Sbjct: 965 MCGRIFCHSCSNNWVRTPHSRKMKRVCQCCLENDKQI 1001
>SB_54221| Best HMM Match : zf-B_box (HMM E-Value=2.1e-17)
Length = 455
Score = 37.9 bits (84), Expect = 0.008
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +2
Query: 194 ERMLECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSR--QVCPVCKA 337
E + C+IC++ D V C H FC CL + R VCP+CKA
Sbjct: 10 EDEVTCSICIEHFNDPRVLPCFHSFCLHCLEELAVHSEGRGKLVCPLCKA 59
>SB_26592| Best HMM Match : zf-B_box (HMM E-Value=1.3e-18)
Length = 355
Score = 37.9 bits (84), Expect = 0.008
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +2
Query: 194 ERMLECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSR--QVCPVCKA 337
E + C+IC++ D V C H FC CL + R VCP+CKA
Sbjct: 10 EDEVRCSICIEHFNDPRVLPCFHSFCRHCLEELAVHSEGRGKLVCPLCKA 59
>SB_6628| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09)
Length = 89
Score = 37.9 bits (84), Expect = 0.008
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +2
Query: 194 ERMLECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSR--QVCPVCKAAISR 349
E + C+IC++ D V C H FC CL + R VCP+CKA +
Sbjct: 10 EDEVTCSICIEHFNDPRVLPCFHSFCRHCLEELAVHSEGRGKLVCPLCKAEFQK 63
>SB_46701| Best HMM Match : zf-B_box (HMM E-Value=1.4e-17)
Length = 442
Score = 37.5 bits (83), Expect = 0.011
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +2
Query: 194 ERMLECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSR--QVCPVCKA 337
E + C+IC++ D V C H FC CL + R VCP+CKA
Sbjct: 10 EDEVTCSICIEHFNDPRVLPCFHSFCRHCLEELAVHSEGRGKLVCPLCKA 59
>SB_21628| Best HMM Match : zf-B_box (HMM E-Value=1.4e-17)
Length = 291
Score = 37.5 bits (83), Expect = 0.011
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +2
Query: 194 ERMLECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSR--QVCPVCKA 337
E + C+IC++ D V C H FC CL + R VCP+CKA
Sbjct: 10 EDEVTCSICIEHFNDPRVLPCFHSFCRHCLEELAVHSEGRGKLVCPLCKA 59
>SB_47995| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09)
Length = 745
Score = 37.5 bits (83), Expect = 0.011
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +2
Query: 194 ERMLECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSR--QVCPVCKA 337
E + C+IC++ D V C H FC CL + R VCP+CKA
Sbjct: 10 EDEVTCSICIEHFNDPRVLPCFHSFCRHCLEELAVHSEGRGKLVCPLCKA 59
>SB_43880| Best HMM Match : zf-B_box (HMM E-Value=5.1e-15)
Length = 405
Score = 37.5 bits (83), Expect = 0.011
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +2
Query: 194 ERMLECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSR--QVCPVCKA 337
E + C+IC++ D V C H FC CL + R VCP+CKA
Sbjct: 9 EDEVTCSICIEHFNDPRVLPCFHSFCRHCLEELAVHSEGRGKLVCPLCKA 58
>SB_11572| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 888
Score = 37.5 bits (83), Expect = 0.011
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +2
Query: 194 ERMLECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSR--QVCPVCKAAISR 349
E + C+IC++ D V C H FC CL + R VCP+CKA +
Sbjct: 9 EDEVTCSICIEHFNDPRVLPCLHSFCRHCLEELAVHSEGRGKLVCPLCKAEFQK 62
>SB_6802| Best HMM Match : zf-B_box (HMM E-Value=5e-18)
Length = 316
Score = 37.5 bits (83), Expect = 0.011
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +2
Query: 194 ERMLECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSR--QVCPVCKA 337
E + C+IC++ D V C H FC CL + R VCP+CKA
Sbjct: 10 EDEVTCSICIEHLNDPRVLPCLHSFCRHCLEELAVHSEGRGKLVCPLCKA 59
>SB_28248| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10)
Length = 119
Score = 37.1 bits (82), Expect = 0.015
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +2
Query: 194 ERMLECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSR--QVCPVCKA 337
E + C+IC++ D V C H FC CL + R VCP+CKA
Sbjct: 10 EDEVTCSICIEHFNDPRVLPCLHSFCRHCLEELAVHSEGRGKLVCPLCKA 59
>SB_6888| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1257
Score = 37.1 bits (82), Expect = 0.015
Identities = 14/56 (25%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +2
Query: 206 ECNICLDTARD-AVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAISREKVIPLY 370
+C +C + +S CG++FC+PC++++L CPV ++++++ +Y
Sbjct: 1200 QCPLCAKVRTNPTALSTCGYVFCYPCIYRYL---GQHGCCPVTHLPSTQQQLVRIY 1252
>SB_57045| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 362
Score = 37.1 bits (82), Expect = 0.015
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = +2
Query: 194 ERMLECNICLDTARDAVVSMCGHLFCWPCLHQWLETR---PSRQVCPVCKAAI 343
++ +EC ICL+ +D V C H FC+ CL L +R + CP CK +
Sbjct: 11 QKEVECPICLERFKDPRVLPCLHTFCYECL-VGLASRYKTEGKWPCPQCKMVV 62
>SB_53640| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10)
Length = 62
Score = 37.1 bits (82), Expect = 0.015
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +2
Query: 194 ERMLECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSR--QVCPVCKA 337
E + C+IC++ D V C H FC CL + R VCP+CKA
Sbjct: 10 EDEVTCSICIEHFNDPRVLPCLHSFCRHCLEELAVHSEGRGKLVCPLCKA 59
>SB_51226| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-09)
Length = 82
Score = 37.1 bits (82), Expect = 0.015
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = +2
Query: 209 CNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSR--QVCPVCKA 337
C+IC++ D V C H FC CL + R VCP+CKA
Sbjct: 15 CSICIEHFNDPRVLPCFHSFCRHCLEELAVHSEGRGKLVCPLCKA 59
>SB_48731| Best HMM Match : zf-C3HC4 (HMM E-Value=6.5e-08)
Length = 688
Score = 37.1 bits (82), Expect = 0.015
Identities = 18/62 (29%), Positives = 32/62 (51%)
Frame = +2
Query: 200 MLECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAISREKVIPLYGRG 379
M C + L A+ ++ C H+FC C+ W + Q CP+C+A ++ + P++ G
Sbjct: 483 MPTCQVKL--AKQIMLRTCKHIFCEDCISLWFD---REQTCPMCRARVAGD---PMWRDG 534
Query: 380 NT 385
T
Sbjct: 535 TT 536
>SB_48027| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-10)
Length = 62
Score = 37.1 bits (82), Expect = 0.015
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +2
Query: 194 ERMLECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSR--QVCPVCKA 337
E + C+IC++ D V C H FC CL + R VCP+CKA
Sbjct: 10 EGEVTCSICIEHFNDPRVLPCLHSFCRHCLEELAVHSEGRGKLVCPLCKA 59
>SB_22421| Best HMM Match : zf-B_box (HMM E-Value=4e-17)
Length = 463
Score = 37.1 bits (82), Expect = 0.015
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +2
Query: 194 ERMLECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSR--QVCPVCKA 337
E + C+IC++ D V C H FC CL + R VCP+CKA
Sbjct: 10 EDEVTCSICIEHFNDPRVLPCLHSFCRHCLEELAVHSEGRGKLVCPLCKA 59
>SB_9017| Best HMM Match : zf-C3HC4 (HMM E-Value=7.9e-12)
Length = 203
Score = 37.1 bits (82), Expect = 0.015
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = +2
Query: 194 ERMLECNICLDTARDAVVSMCGHLFCWPCLHQWLETR---PSRQVCPVCKAAI 343
++ +EC ICL+ +D V C H FC+ CL L +R + CP CK +
Sbjct: 11 QKEVECPICLERFKDPRVLPCLHTFCYECL-VGLASRYKTEGKWPCPQCKMVV 62
>SB_12329| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 197
Score = 36.7 bits (81), Expect = 0.019
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +2
Query: 203 LECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAI 343
L C +C+D +AV+ CGH+ C C + + + CPVC+ AI
Sbjct: 144 LRCKVCMDEQINAVLIPCGHMVC--C----EQCAMNLEACPVCRGAI 184
>SB_16819| Best HMM Match : BIR (HMM E-Value=7.5e-30)
Length = 514
Score = 36.7 bits (81), Expect = 0.019
Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = +2
Query: 194 ERMLE---CNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAI 343
ERM E C IC+D V CGHL C P + +E +CP+C+A I
Sbjct: 465 ERMQEERLCKICMDAEVGIVFLPCGHLSCCPGCAEGME------LCPMCRAPI 511
>SB_57762| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 639
Score = 36.3 bits (80), Expect = 0.026
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +2
Query: 194 ERMLECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSR--QVCPVCKA 337
E + C++C++ D V C H FC CL + R VCP+CKA
Sbjct: 10 EDEVTCSLCIEHFNDPRVLPCLHSFCRHCLEELAVHSEGRGKLVCPLCKA 59
>SB_18515| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 391
Score = 36.3 bits (80), Expect = 0.026
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +2
Query: 194 ERMLECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSR--QVCPVCKA 337
E + C++C++ D V C H FC CL + R VCP+CKA
Sbjct: 10 EDEVTCSLCIEHFNDPRVLPCLHSFCRHCLEELAVHSEGRGKLVCPLCKA 59
>SB_5620| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 937
Score = 36.3 bits (80), Expect = 0.026
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +2
Query: 203 LECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQV-CPVCKAAI 343
L C ICLD ++ C H C CL SR + CP+C++ I
Sbjct: 19 LLCPICLDEFKEPKTLSCMHDLCRKCLEDMAARESSRVIRCPLCRSEI 66
>SB_4090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2342
Score = 36.3 bits (80), Expect = 0.026
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +2
Query: 194 ERMLECNICLDTARDAVVSMCGHLFCWPCLHQWL--ETRPSRQVCPVCKA 337
E + C++C++ D V C H FC CL + + VCP+CKA
Sbjct: 10 EDEVTCSLCIEHFNDPRVLPCFHSFCRHCLEELAVHSEGKGKLVCPLCKA 59
>SB_50665| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 625
Score = 35.9 bits (79), Expect = 0.034
Identities = 14/46 (30%), Positives = 19/46 (41%)
Frame = +2
Query: 209 CNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAIS 346
C ICLD + S C H C C E CP+C+ ++
Sbjct: 168 CAICLDVLEKPLSSKCQHSCCSDCWKSAFELGEKHPACPICQETLA 213
>SB_41431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 667
Score = 35.9 bits (79), Expect = 0.034
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = +2
Query: 209 CNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSR--QVCPVCKA 337
C+IC++ D V C H FC CL + R VCP+CKA
Sbjct: 20 CSICIEHFDDPRVLPCLHSFCRHCLEELAVHSEGRGKLVCPLCKA 64
>SB_38753| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 35.9 bits (79), Expect = 0.034
Identities = 14/46 (30%), Positives = 19/46 (41%)
Frame = +2
Query: 209 CNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAIS 346
C ICLD + S C H C C E CP+C+ ++
Sbjct: 76 CAICLDVLEKPLSSKCQHSCCSDCWKSAFELGEKHPACPICQETLA 121
>SB_38368| Best HMM Match : zf-C3HC4 (HMM E-Value=4.4e-15)
Length = 846
Score = 35.9 bits (79), Expect = 0.034
Identities = 14/46 (30%), Positives = 19/46 (41%)
Frame = +2
Query: 209 CNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAIS 346
C ICLD + S C H C C E CP+C+ ++
Sbjct: 316 CAICLDVLEKPLSSKCQHSCCSDCWKSAFELGEKHPACPICQETLA 361
Score = 35.9 bits (79), Expect = 0.034
Identities = 14/46 (30%), Positives = 19/46 (41%)
Frame = +2
Query: 209 CNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAIS 346
C ICLD + S C H C C E CP+C+ ++
Sbjct: 642 CAICLDVLEKPLSSKCQHSCCSDCWKSAFELGEKHPACPICQETLA 687
>SB_35560| Best HMM Match : zf-B_box (HMM E-Value=1e-20)
Length = 470
Score = 35.9 bits (79), Expect = 0.034
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +2
Query: 185 KHDERMLECNICLDTARDAVVSMCGHLFCWPCLHQWLE-TRPSRQVCPVCK 334
K E + C IC++ D + C H FC CL E + + VCP+CK
Sbjct: 7 KQLEDEVTCAICIEHFTDPRLLPCLHTFCRHCLEDLAEHSGKGKLVCPLCK 57
>SB_29221| Best HMM Match : zf-C3HC4 (HMM E-Value=7.5e-10)
Length = 337
Score = 35.9 bits (79), Expect = 0.034
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +2
Query: 185 KHDERMLE---CNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAIS 346
+ DE+ +E C ICL + VV C H FC C Q + + CP+C+ IS
Sbjct: 26 QQDEKDIEDFTCPICLQLLVEPVVLPCEHEFCKMCFTQ--NVQEANLQCPMCRIRIS 80
>SB_23299| Best HMM Match : zf-C3HC4 (HMM E-Value=5.9e-06)
Length = 418
Score = 35.9 bits (79), Expect = 0.034
Identities = 14/46 (30%), Positives = 19/46 (41%)
Frame = +2
Query: 209 CNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAIS 346
C ICLD + S C H C C E CP+C+ ++
Sbjct: 174 CAICLDVLEKPLSSKCQHSCCSDCWKSAFELGEKHPACPICQETLA 219
>SB_22842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 757
Score = 35.9 bits (79), Expect = 0.034
Identities = 14/46 (30%), Positives = 19/46 (41%)
Frame = +2
Query: 209 CNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAIS 346
C ICLD + S C H C C E CP+C+ ++
Sbjct: 319 CAICLDVLEKPLSSKCQHSCCSDCWKSAFELGEKHPACPICQETLA 364
>SB_4835| Best HMM Match : WWE (HMM E-Value=3.7e-19)
Length = 320
Score = 35.9 bits (79), Expect = 0.034
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +2
Query: 206 ECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAISREKV-IPLYGRGN 382
+C +CL A V CGH+FC+ C+ + + R SR+ C +C+ IS + + P +
Sbjct: 70 DCPVCLQQASYPVRLPCGHMFCFLCI-KGVALR-SRK-CAICRQPISPDYLDKPTLVKVV 126
Query: 383 TKQEDPRNKVPPRP 424
+ Q +K P P
Sbjct: 127 SGQSSSSDKAPSDP 140
>SB_37786| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 434
Score = 35.5 bits (78), Expect = 0.045
Identities = 14/46 (30%), Positives = 19/46 (41%)
Frame = +2
Query: 209 CNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAIS 346
C ICLD + S C H C C E CP+C+ ++
Sbjct: 172 CAICLDVLEKPLSSKCQHSCCSDCWKSAFELGGKHPACPICQETLA 217
>SB_25082| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 585
Score = 35.5 bits (78), Expect = 0.045
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +2
Query: 206 ECNICLDTARDAVVSMCGHL-FCWPCLHQWLETRPSRQVCPVCKAAISREKVIPLY 370
+C ICL+ R+ V+ CGH+ C C Q + CPVC+ I R ++P+Y
Sbjct: 537 QCVICLENQRNVVLLNCGHVCSCRTCAQQIHQ-------CPVCRGDIVR--MVPIY 583
>SB_11979| Best HMM Match : zf-C3HC4 (HMM E-Value=0.061)
Length = 63
Score = 35.5 bits (78), Expect = 0.045
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +2
Query: 203 LECNICLDTARDAVVSM-CGHLFCWPCLHQWLETRPSRQVCPVCKAAISREKVIPLY 370
++C IC++ +VS+ C H+ C C WL T ++++CP C S + +Y
Sbjct: 9 VKCLICMEPYTVPLVSISCWHVHCEEC---WLRTLGAKKLCPQCNMITSPNDLRKIY 62
>SB_8282| Best HMM Match : NHL (HMM E-Value=9.2e-23)
Length = 877
Score = 35.5 bits (78), Expect = 0.045
Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +2
Query: 197 RMLECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPS-RQVCPVCKAAI 343
+ L C IC RDA V C H +C C+ + R S R CP C I
Sbjct: 141 QQLACGICHALLRDARVLPCLHTYCRRCIEDIILHRQSVRAHCPSCNREI 190
>SB_2107| Best HMM Match : zf-B_box (HMM E-Value=3.9e-08)
Length = 599
Score = 35.1 bits (77), Expect = 0.059
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = +2
Query: 209 CNICLDTARDAVVSMCGHLFCWPCLHQWLE-TRPSRQVCPVC--KAAISREKV 358
C++CL+ +D V C H +C CL +E ++ CP C K IS E+V
Sbjct: 26 CSLCLEQYQDPRVLACLHTYCRHCLESLVEHSKECTVSCPQCREKIEISVEEV 78
>SB_24514| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 402
Score = 35.1 bits (77), Expect = 0.059
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +2
Query: 191 DERMLECNICLDTARDAV---VSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAI--SREK 355
DE C ICLD ++ + C H + C+ WL ++ CPVCK + S++K
Sbjct: 295 DEYYDVCAICLDEYKEGDKLRILPCDHAYHCKCVDPWLTE--GKRTCPVCKRPVETSKKK 352
Query: 356 VIPLYGRGNTKQ 391
+ G + +Q
Sbjct: 353 KQGIQGSADAEQ 364
>SB_18762| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 261
Score = 35.1 bits (77), Expect = 0.059
Identities = 13/46 (28%), Positives = 19/46 (41%)
Frame = +2
Query: 209 CNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAIS 346
C ICLD + S C H C C + CP+C+ ++
Sbjct: 25 CAICLDVLEKPLSSKCQHSCCSDCWESAFDLGEKHPACPICQETLA 70
>SB_59028| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-05)
Length = 362
Score = 34.7 bits (76), Expect = 0.078
Identities = 14/46 (30%), Positives = 19/46 (41%)
Frame = +2
Query: 209 CNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAIS 346
C ICLD + S C H C C E + CP+C ++
Sbjct: 118 CAICLDVLGKPLSSKCQHSCCSDCWKSAFELGETHPACPICHETLA 163
>SB_40057| Best HMM Match : zf-B_box (HMM E-Value=1.4e-08)
Length = 584
Score = 34.7 bits (76), Expect = 0.078
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Frame = +2
Query: 191 DERMLECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQV-CPVC--KAAISREKV 358
D + + C +CL+ +D V C H +C CL E + CP C K IS +KV
Sbjct: 10 DVKDVTCCLCLEQYQDPRVLACLHTYCRHCLESLAEHSQGDSISCPQCREKIQISVDKV 68
>SB_29995| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-05)
Length = 362
Score = 34.7 bits (76), Expect = 0.078
Identities = 14/46 (30%), Positives = 19/46 (41%)
Frame = +2
Query: 209 CNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAIS 346
C ICLD + S C H C C E + CP+C ++
Sbjct: 118 CAICLDVLGKPLSSKCQHSCCSDCWKSAFELGETHPACPICHETLA 163
>SB_944| Best HMM Match : zf-B_box (HMM E-Value=6.7e-15)
Length = 629
Score = 34.7 bits (76), Expect = 0.078
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +2
Query: 194 ERMLECNICLDTARDAVVSMCGHLFCWPCLHQWL--ETRPSRQVCPVCKA 337
E + C++C++ D V C H FC CL + + VCP+CK+
Sbjct: 130 EDEVTCSLCIEHFNDPRVLPCLHSFCRHCLEELAVHSEGKGKLVCPLCKS 179
>SB_13725| Best HMM Match : zf-B_box (HMM E-Value=6e-14)
Length = 594
Score = 34.3 bits (75), Expect = 0.10
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +2
Query: 191 DERMLECNICLDTARDAVVSMCGHLFCWPCLHQWLE-TRPSRQVCPVCKAAI 343
D + + C +CL+ +D V C H +C CL +E ++ CP C+ I
Sbjct: 10 DVKDVTCCLCLEQYQDPRVLACLHTYCRHCLESLVEHSKECTVSCPQCREKI 61
>SB_33568| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1555
Score = 34.3 bits (75), Expect = 0.10
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +2
Query: 209 CNICLDTARDAVVSMCGHLFCWPCLHQW 292
C IC +D +++ CGH +C C+ +W
Sbjct: 30 CAICHIVVKDPILTSCGHSYCKCCIQKW 57
>SB_384| Best HMM Match : IBR (HMM E-Value=1.1e-12)
Length = 259
Score = 34.3 bits (75), Expect = 0.10
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = +2
Query: 185 KHDERMLECNICL---DTARDAVVSMCGHLFCWPCLHQWL 295
+H + L C ICL T + A++ CG FC CL Q++
Sbjct: 16 RHRPKTLYCKICLADCPTKKGAILKSCGCFFCKECLKQYV 55
>SB_37011| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1829
Score = 33.9 bits (74), Expect = 0.14
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = +2
Query: 209 CNICLDTARDAVVSMCGHLFCWPCLHQWLE-TRPSRQVCPVC--KAAISREKV 358
C++CL +D V C H +C CL +E ++ CP C K IS E+V
Sbjct: 17 CSLCLGQYQDPRVLACLHTYCRHCLESLVEHSKECTVSCPQCREKIEISVEEV 69
>SB_27455| Best HMM Match : Extensin_2 (HMM E-Value=0.75)
Length = 159
Score = 33.9 bits (74), Expect = 0.14
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = +1
Query: 346 QRESDPALWKRKHKAGRPKKQGAPPAGRTAHGAGEYER---LPRFRLRRGIPHVVRDRSL 516
+R+S P WKR+ + K+ +PP + +++R P+++L P RD S
Sbjct: 28 KRDSSPPQWKRESTPPQWKRDSSPPQWKRDSSPPQWKRDSSPPQWKLDSSPPQWKRDSSP 87
Query: 517 PVW 525
P W
Sbjct: 88 PQW 90
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/72 (26%), Positives = 30/72 (41%), Gaps = 3/72 (4%)
Frame = +1
Query: 346 QRESDPALWKRKHKAGRPKKQGAPPAGRTAHGAGEYER---LPRFRLRRGIPHVVRDRSL 516
+R+S P WKR + K +PP + +++R P+++ P RD S
Sbjct: 55 KRDSSPPQWKRDSSPPQWKLDSSPPQWKRDSSPPQWKRDSSPPQWKRDSSPPQWKRDSSP 114
Query: 517 PVWNFHLDI*FW 552
P W L W
Sbjct: 115 PQWKQDLSPPQW 126
>SB_3322| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 777
Score = 33.5 bits (73), Expect = 0.18
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +2
Query: 191 DERMLECNICLDTARDAVVSMCGHL-FCWPC-LHQWLETR 304
D+ +LEC IC+ RD ++ C HL C C H L+ R
Sbjct: 243 DDNVLECVICMSDFRDTLILPCRHLCLCKACAFHALLQIR 282
>SB_56142| Best HMM Match : zf-B_box (HMM E-Value=2.9e-10)
Length = 691
Score = 33.1 bits (72), Expect = 0.24
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = +2
Query: 191 DERMLECNICLDTARDAVVSMCGHLFCWPCLHQWLE--TRPSRQVCPVCK 334
DE+ + C +CLD D + C H +C CL + + CP C+
Sbjct: 10 DEKDVTCLLCLDIFTDPRLLPCLHTYCKKCLEDLVSQCQKKGEIYCPQCR 59
>SB_52170| Best HMM Match : zf-C3HC4 (HMM E-Value=7.4e-08)
Length = 291
Score = 33.1 bits (72), Expect = 0.24
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +2
Query: 209 CNICLDTARDAVVSM-CGHLFCWPCLHQWLETRPSRQVCPVCKAAISREK-VIPLYGRGN 382
C +C DA + C H FC C+ ++LET CPVC A I + + ++ + R N
Sbjct: 48 CVLCGGYLVDATTIIECLHSFCRCCIVRYLET---SYRCPVCDAEIHKTRPLLNIRRRKN 104
Query: 383 TKQE 394
T ++
Sbjct: 105 TSEQ 108
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 33.1 bits (72), Expect = 0.24
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 7/54 (12%)
Frame = -2
Query: 546 LNVEVKIPNGKA--PIPND-MWN-PSPKPKPGKP---LVLSGSVRCPAGRGGTL 406
+NV+VK+P+GK PIP +W P PK KP P +++ + + A G TL
Sbjct: 181 VNVKVKMPDGKEYDPIPKQFLWTLPPPKKKPPAPDPLMLVKVAAKAGAHAGATL 234
>SB_4488| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 33.1 bits (72), Expect = 0.24
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 203 LECNICLDTARDAVVSMCGHLFCWPCL 283
L C +C +D V++ CGH FC C+
Sbjct: 192 LFCPLCRRVFKDPVITSCGHTFCQACI 218
>SB_27532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 649
Score = 32.7 bits (71), Expect = 0.32
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +2
Query: 203 LECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQV--CPVCK 334
L C +CL ++ ++ C H FC C+ + L + V CP C+
Sbjct: 18 LMCPVCLGEYKNPMLLRCYHSFCLRCVQELLHQSGEKGVVKCPQCR 63
>SB_14837| Best HMM Match : UCH (HMM E-Value=1.10002e-42)
Length = 1712
Score = 32.7 bits (71), Expect = 0.32
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Frame = +2
Query: 209 CNICLDTARDAVVSM---CGHLFCWPCLHQWLETRPSRQVCPVC 331
C++CL+ +A++ CG +FC CL L+ CP+C
Sbjct: 782 CSLCLEDRTNAMLLTHDGCGRMFCRQCLGVMLKDADRTIDCPIC 825
>SB_23934| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-07)
Length = 617
Score = 32.7 bits (71), Expect = 0.32
Identities = 18/55 (32%), Positives = 23/55 (41%), Gaps = 5/55 (9%)
Frame = +2
Query: 206 ECNICLDTARDAVVSM---CGHLFCWPCLHQWL--ETRPSRQVCPVCKAAISREK 355
EC ICLD + + CGH F C+ WL + CP C+ R K
Sbjct: 559 ECVICLDEFKPGCTLLGLPCGHSFHQHCIEVWLAGDNTAPHHCCPNCRWPAYRAK 613
>SB_57365| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 366
Score = 32.3 bits (70), Expect = 0.42
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = -2
Query: 642 RIATHRNIFDRNCSSSNWAVPRGAALGLGSPKLNVEVKIPNGKAPIPNDMWNPSPKP 472
++AT +FD N + N V LG+ K+N + +P K +NP PKP
Sbjct: 20 KVATEEMVFDTN-DNINTGVKHNRQHSLGNDKVNPKPSLPPIKEEHHTPDFNPPPKP 75
>SB_13054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 549
Score = 32.3 bits (70), Expect = 0.42
Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +2
Query: 203 LECNICLDTARDA-VVSMCGHLFCWPCLHQWLETRPSRQVCPVCK 334
L C +CL+ ++ ++ C H C PCL + CP C+
Sbjct: 15 LTCPVCLEELKEPKCLTSCAHNVCKPCLDRMTFNGEKEIRCPTCR 59
>SB_11289| Best HMM Match : zf-TRAF (HMM E-Value=1.7e-08)
Length = 230
Score = 32.3 bits (70), Expect = 0.42
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +2
Query: 209 CNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAISREKVIPL 367
C IC DAV GH+FC C+ L+ + CP+ ++ +S E + P+
Sbjct: 19 CPICQFIIEDAVCCPQGHIFCRSCVVVHLQQFGNGN-CPLDRSELSLEDIRPV 70
>SB_24396| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 288
Score = 31.9 bits (69), Expect = 0.55
Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
Frame = +2
Query: 188 HDERMLECNICLDTARDAVVSMCGHLFCWPCL--HQWLETRPSRQVCPVCK 334
+ + L C C + + C H FC CL H L + VCP+C+
Sbjct: 9 YSPQSLNCRACHKVFTEPKILDCLHTFCQKCLGTHDILGAGTNSIVCPLCR 59
>SB_904| Best HMM Match : zf-C3HC4 (HMM E-Value=7.4e-08)
Length = 510
Score = 31.9 bits (69), Expect = 0.55
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +2
Query: 209 CNICLDTARDAVVSM-CGHLFCWPCLHQWLETRPSRQVCPVCKAAISREKVIPLYGRGNT 385
C +C DA + C H FC C+ ++LET CPVC A I + + + L R +
Sbjct: 16 CVLCGGYLVDATTIIECLHSFCRCCIVRYLET---SYRCPVCDAEIHKTRPL-LNIRADN 71
Query: 386 KQEDPRNKVPP 418
+D KV P
Sbjct: 72 VLQDIVYKVVP 82
>SB_31692| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 598
Score = 31.5 bits (68), Expect = 0.73
Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = +2
Query: 206 ECNICLDTARDAV-VSMCGHLFCWPCLHQ 289
EC IC RD + + CGH FC CL +
Sbjct: 25 ECPICQLAFRDPIQIEECGHRFCQSCLQE 53
>SB_33822| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0022)
Length = 229
Score = 31.5 bits (68), Expect = 0.73
Identities = 19/56 (33%), Positives = 24/56 (42%)
Frame = +2
Query: 209 CNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAISREKVIPLYGR 376
C IC + V ++ H C CL Q L S CPVCK +S I + R
Sbjct: 133 CPICSELLDKPVETIFTHNACGACLTQALAVNSS---CPVCKTILSSGDDIKKFNR 185
>SB_42290| Best HMM Match : Band_41 (HMM E-Value=3.6e-09)
Length = 474
Score = 31.1 bits (67), Expect = 0.96
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +2
Query: 203 LECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSR-QVCPVCKAAIS 346
L C IC+D + CGH++C C +T S CP+CK I+
Sbjct: 404 LTCQICMDAEVNTAFCPCGHVYC--C-----QTCASNLYYCPLCKTFIT 445
>SB_31765| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 241
Score = 31.1 bits (67), Expect = 0.96
Identities = 19/60 (31%), Positives = 26/60 (43%)
Frame = +2
Query: 209 CNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAISREKVIPLYGRGNTK 388
C IC + V ++ H C CL Q L S CPVCK +S I + + + K
Sbjct: 112 CPICSELLDKPVETIFTHNACGACLTQALAVNSS---CPVCKTILSSGDDIKKFNQQDIK 168
>SB_22639| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 956
Score = 31.1 bits (67), Expect = 0.96
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Frame = +2
Query: 206 ECNICLDTARDAVVSMCGHLFCWPCL-HQWLETRPSRQV--CPVCKAAI 343
EC++C T + + C H FC CL + E + + CP CK I
Sbjct: 97 ECSLCHKTPSEPKILKCFHTFCNECLTEKSAEFKGDGETFSCPSCKTRI 145
>SB_7109| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0029)
Length = 232
Score = 31.1 bits (67), Expect = 0.96
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = +2
Query: 209 CNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAIS 346
C IC + V ++ H C CL Q L S CPVCK +S
Sbjct: 86 CPICCELLDKPVETIFTHNACGACLTQALAVNSS---CPVCKTILS 128
>SB_55125| Best HMM Match : zf-C2HC (HMM E-Value=1.5e-13)
Length = 405
Score = 31.1 bits (67), Expect = 0.96
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Frame = -2
Query: 672 GQANTSHSTNRIATHRNIFDRNCSSSNWAVPR---GAALGLGSPKLNVEVKIPNGKAPIP 502
G +T H T R +THR+I ++ + + A + +PK + +P+ P P
Sbjct: 299 GCDSTGHVTGRFSTHRSIGACPIAAESRKAEKLQEKADSIISTPKTSA---VPSPATPNP 355
Query: 501 NDMWNPSPKPKPGKP 457
+D P PK +PG+P
Sbjct: 356 DD---PPPKKRPGRP 367
>SB_41147| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 332
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +2
Query: 206 ECNICLDTARDAVVSM-CGHLFCWPCLHQWLETRPSRQVCPVCKAAISREKVIP 364
+C IC RD V + CGH FC CL P+ + ISR+KV P
Sbjct: 41 QCPICQLPFRDPVQTRDCGHRFCESCLE------------PILRRCISRDKVYP 82
>SB_41628| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 690
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Frame = +2
Query: 206 ECNICLDTARD---AVVSMCGHLFCWPCLHQWLETRPSR 313
EC IC R+ + CGH FC C +L+++ SR
Sbjct: 311 ECGICFGDFRENKMTALMSCGHSFCTECWEFYLKSQISR 349
>SB_39493| Best HMM Match : zf-TRAF (HMM E-Value=1.5e-09)
Length = 310
Score = 30.7 bits (66), Expect = 1.3
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +2
Query: 203 LECNICLDTARDAVVSMCGHLFCWPCLHQWL 295
L C IC D + +++ C H +C C+ WL
Sbjct: 16 LLCCICRDVLEEPLMAPCEHSYCSACVLGWL 46
>SB_24485| Best HMM Match : zf-CCCH (HMM E-Value=3e-09)
Length = 321
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = +2
Query: 191 DERMLECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPV 328
D C +C T ++ VV+ C H FC C Q + VC V
Sbjct: 239 DNLPFACIMCRKTFKNPVVTKCLHYFCEACALQHYKKNSKCFVCGV 284
>SB_19782| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 728
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/59 (23%), Positives = 25/59 (42%)
Frame = +2
Query: 206 ECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAISREKVIPLYGRGN 382
+C++C + + + C H++C CL ET + + + K EK G N
Sbjct: 13 KCSLCSEVLTEPKILRCFHVYCQKCLQ--AETNEAGEKSKILKCPCCLEKTETANGEAN 69
>SB_37872| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 357
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 7/63 (11%)
Frame = +2
Query: 185 KHDERMLECNIC---LDTARDAV-VSMCGHLFCWPCLHQWL---ETRPSRQVCPVCKAAI 343
+H + EC C L+T +D CG +FC C + TR QVC C A +
Sbjct: 279 EHKDDARECRNCQKPLNTNKDKYHCHHCGKIFCEGCRSKTFSNSSTRRPHQVCDACYATL 338
Query: 344 SRE 352
+ +
Sbjct: 339 TND 341
>SB_59357| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1716
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +2
Query: 209 CNICLDTARDAVVSM-CGHLFCWPCLHQWLETRPSRQVCPVCKAAISREK 355
C +C DA + C H FC C+ WL+ + CPVC + + +
Sbjct: 1366 CVLCGGYLVDATTIVECLHSFCRSCIVSWLQ---ASYHCPVCDTEVHKTR 1412
>SB_37345| Best HMM Match : zf-B_box (HMM E-Value=1.3e-23)
Length = 581
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/48 (27%), Positives = 21/48 (43%)
Frame = +2
Query: 203 LECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAIS 346
L C +C + + + C H FC CL + R CP C+ ++
Sbjct: 143 LFCPLCHEMFANPRLLPCLHTFCKRCLENLVPPRSHTLSCPSCRLDVA 190
>SB_35671| Best HMM Match : zf-C3HC4 (HMM E-Value=0.01)
Length = 527
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = +2
Query: 209 CNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAISREKVIPLYGR 376
C IC + V ++ H C CL Q L +CPVCK +S I + R
Sbjct: 252 CPICSELLDKPVETIFTHNACDACLTQALAV---NSLCPVCKTILSSGDDIKKFNR 304
>SB_32934| Best HMM Match : K_tetra (HMM E-Value=7.79963e-42)
Length = 1207
Score = 29.9 bits (64), Expect = 2.2
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 248 SMCGHLFCWPCLHQW 292
+MCG FCW CL W
Sbjct: 846 TMCGGHFCWECLKDW 860
>SB_53581| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1584
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +3
Query: 267 SAGHVYINGWKPDPVGKSVPFARPPSAERK 356
S H + W P PV +P A PPS ++
Sbjct: 1473 STQHTVDHSWAPSPVSAPLPMAAPPSPPQR 1502
>SB_49946| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 139
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 3/45 (6%)
Frame = +2
Query: 209 CNICL---DTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCK 334
C ICL + C HLF C+ WLE S CPVC+
Sbjct: 62 CPICLGDYEKGESTKQMPCDHLFHPGCILPWLEKTNS---CPVCR 103
>SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4)
Length = 330
Score = 29.5 bits (63), Expect = 2.9
Identities = 24/74 (32%), Positives = 32/74 (43%), Gaps = 6/74 (8%)
Frame = -2
Query: 660 TSHSTNRIATHRNIFD----RNCSSSNWA--VPRGAALGLGSPKLNVEVKIPNGKAPIPN 499
+SHSTNR H + ++ SSS+ +P LGL L G PIP+
Sbjct: 216 SSHSTNRSHHHHHHHSSSHYKSSSSSSLKPLIPPSPTLGLRDKHLASSSS--KGHPPIPS 273
Query: 498 DMWNPSPKPKPGKP 457
N +P P P P
Sbjct: 274 ASQNATPPPPPPPP 287
>SB_14351| Best HMM Match : zf-B_box (HMM E-Value=2.3e-12)
Length = 549
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/68 (25%), Positives = 27/68 (39%), Gaps = 3/68 (4%)
Frame = +2
Query: 209 CNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAIS--REKVIP-LYGRG 379
C C D + C H C CL + + CPVC + E+++P + R
Sbjct: 21 CRYCNGIFEDPRLLPCLHSLCKKCLKDIEQAQEGAIACPVCLTDVECHLEELLPNVLARS 80
Query: 380 NTKQEDPR 403
K+ + R
Sbjct: 81 KLKERENR 88
>SB_106| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 362
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 13/55 (23%)
Frame = +2
Query: 209 CNICLDTA---------RDAVVSMCGHLFCWPCLHQWLETRPSR----QVCPVCK 334
C +CLD R ++ C H FC C+ +W + + + CP+C+
Sbjct: 174 CAVCLDVVMSKPKQSERRFGILPNCIHAFCLECIRKWRKASHAEKKVVRACPICR 228
>SB_50209| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 473
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/78 (19%), Positives = 34/78 (43%)
Frame = +3
Query: 114 KWRRLVKRERAPRRLGATLVAKKTNMTKEC*NATSVWTQPVMQSSVCAATSSAGHVYING 293
+WR +K +P G+ V ++++ + N+T W +Q ++++
Sbjct: 162 QWRWNLKNFTSPTSTGSNGVMFRSSVNETLRNSTLQWRNVSLQCEWNLKNLYLANIHLLQ 221
Query: 294 WKPDPVGKSVPFARPPSA 347
W P+ + FA P++
Sbjct: 222 WPSSPMNTTYAFASVPAS 239
>SB_3579| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Frame = +2
Query: 191 DERMLECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQ-VCPVCKAAISREKVIPL 367
D+ C+ C + + C ++ CL L T P+ +CP CK S+ +P
Sbjct: 181 DDHEDACSECKASGELLMCDTCTLVYHLSCLDPPLTTIPTGMWICPKCKETASKSDTVPW 240
Query: 368 YG 373
G
Sbjct: 241 PG 242
>SB_52129| Best HMM Match : Sec23_trunk (HMM E-Value=0)
Length = 942
Score = 29.1 bits (62), Expect = 3.9
Identities = 21/69 (30%), Positives = 29/69 (42%)
Frame = +1
Query: 232 P*CSRQYVRPPLLLAMFTSMVGNQTQSASLSRLQGRHQQRESDPALWKRKHKAGRPKKQG 411
P Q + PP A S+ G QT + LQ Q+ P H +G+PK+ G
Sbjct: 249 PNAQAQQMTPPSSAAPPQSLPGLQTSPS----LQPPSQRSTPSPQSMSALH-SGKPKRPG 303
Query: 412 APPAGRTAH 438
PP+ H
Sbjct: 304 MPPSPSVPH 312
>SB_23642| Best HMM Match : Neuromodulin (HMM E-Value=4.7)
Length = 286
Score = 29.1 bits (62), Expect = 3.9
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +1
Query: 343 QQRESDPALWKRKHKAGRPKKQGAPPAGRTAHGAGEYERLPRFRLRRGIPHVVRDRSLP 519
Q+R S +L ++K +G P G P +A G+G+ + + + P VV D+ LP
Sbjct: 50 QERVSSRSLQEKKVTSGTPATSGVKPG--SARGSGKSRSANKQKTK---PQVVNDKPLP 103
>SB_54202| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 118
Score = 28.7 bits (61), Expect = 5.1
Identities = 24/66 (36%), Positives = 28/66 (42%), Gaps = 16/66 (24%)
Frame = +2
Query: 203 LECNICL-----DTARDAVVS--MCGHLFCWPCLHQWLETRP-SRQ-------VCPVC-K 334
+EC IC DT D CG F CL++WL + P SRQ CP C K
Sbjct: 51 MECGICYAYRLNDTIPDKACDDPRCGQPFHRDCLYEWLRSLPSSRQSFNMVFGECPYCSK 110
Query: 335 AAISRE 352
I E
Sbjct: 111 VGIDEE 116
>SB_40458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +2
Query: 284 HQWLETRPSRQVCPVCKAAISREKVIPLYGRGNTKQEDPRNKVPPRPAGQRTEPESTS 457
HQ + + S CP CK S E R ++E+P + V R +RT+ E++S
Sbjct: 371 HQKQKEQGSTPECPKCKGVHSLETCEE--NRNGEERENPESSVINRIVTKRTQNEASS 426
>SB_34466| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 522
Score = 28.7 bits (61), Expect = 5.1
Identities = 8/33 (24%), Positives = 17/33 (51%)
Frame = +2
Query: 278 CLHQWLETRPSRQVCPVCKAAISREKVIPLYGR 376
C+ +WL+ + CP C A ++ + +Y +
Sbjct: 155 CIERWLKAKGGSDKCPQCNAPAKKKDIRNIYAK 187
>SB_16508| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 514
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/43 (30%), Positives = 17/43 (39%)
Frame = +2
Query: 203 LECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVC 331
L C++C R + C H FC CL + CP C
Sbjct: 18 LNCSLCHRLIRGPKLLPCLHSFCLACLEDLVTENDVGFNCPQC 60
>SB_10780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 126
Score = 28.7 bits (61), Expect = 5.1
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +2
Query: 206 ECNICLDTARDAVVSMCGHLFC 271
+C +C+ AR ++ CGH FC
Sbjct: 99 QCPVCITDARFLTMTNCGHEFC 120
>SB_31352| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 401
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +2
Query: 209 CNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAIS 346
C IC+D CGH+ C C +E + CP+C++ I+
Sbjct: 352 CQICMDVEVATAFCPCGHVVC--C----VECSALCKECPLCRSQIT 391
>SB_48235| Best HMM Match : zf-C3HC4 (HMM E-Value=0.12)
Length = 109
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/45 (26%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +2
Query: 203 LECNICLDTARDAV--VSMCGHLFCWPCLHQWLETRPSRQVCPVC 331
+EC IC + D + ++ C CL+ W + + R + P C
Sbjct: 1 MECLICKEEEEDVMETINCCKQPMHHRCLNDWYKVQEYRGLLPTC 45
>SB_41371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 362
Score = 28.3 bits (60), Expect = 6.8
Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = -2
Query: 564 GLGSPKLNVEVKIPNGKAPIPNDMWNPSPKPKPGKPLVLSGS---VRCPAGRGGTLFLGS 394
GL + ++ + NG + P D P G LS S +CPAG GGT S
Sbjct: 227 GLNATPADLNLPPKNGYSA-PLDPCKSEPCQNNGTCAALSASDYNCKCPAGFGGT-ECNS 284
Query: 393 SCFV-FP 376
+CF+ FP
Sbjct: 285 TCFISFP 291
>SB_12595| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 162
Score = 28.3 bits (60), Expect = 6.8
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 209 CNICLDTARDAVVSMCGHLFCWPCL 283
C+ C +DAV + CGH +C C+
Sbjct: 61 CSKCGFILKDAVQTDCGHRYCLSCI 85
>SB_51720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 107
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/45 (26%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +2
Query: 203 LECNICLDTARDAV--VSMCGHLFCWPCLHQWLETRPSRQVCPVC 331
+EC IC + D + ++ C CL+ W + + R + P C
Sbjct: 1 MECLICKEEEEDVMETINCCKQPMHHRCLNDWYKVQEYRGLLPTC 45
>SB_26397| Best HMM Match : zf-C3HC4 (HMM E-Value=0.78)
Length = 110
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +2
Query: 203 LECNICLDTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVC 331
+EC IC + V+ C CL+ W + + R + P C
Sbjct: 1 MECIICKEEEIMDVIQCCKQTMQNRCLNDWYKVQEYRGIEPTC 43
>SB_58524| Best HMM Match : Ank (HMM E-Value=3.4e-16)
Length = 1003
Score = 27.9 bits (59), Expect = 9.0
Identities = 17/48 (35%), Positives = 18/48 (37%), Gaps = 3/48 (6%)
Frame = -2
Query: 525 PNGKAPIPNDMWNPSPKPKPGKPLVLSGSVRCPAG---RGGTLFLGSS 391
P P PN W KP+ P S S R G GG L L S
Sbjct: 444 PKASPPEPNTHWRGKRKPRSADPYRPSNSRRLSKGSQTNGGALSLSGS 491
>SB_30956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 135
Score = 27.9 bits (59), Expect = 9.0
Identities = 21/63 (33%), Positives = 27/63 (42%)
Frame = -2
Query: 615 DRNCSSSNWAVPRGAALGLGSPKLNVEVKIPNGKAPIPNDMWNPSPKPKPGKPLVLSGSV 436
DR+ S N + G PK N PN P PN NP+P P P L L+ ++
Sbjct: 79 DRSLLSHNPRSTPSQLMQRGIPKTNPN---PN---PNPNPNPNPNPNPNPNLTLTLTLTI 132
Query: 435 RCP 427
P
Sbjct: 133 PKP 135
>SB_38560| Best HMM Match : zf-C3HC4 (HMM E-Value=3.1)
Length = 197
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/51 (29%), Positives = 19/51 (37%), Gaps = 9/51 (17%)
Frame = +2
Query: 209 CNICLD--------TARDAVVSMCGHLFCW-PCLHQWLETRPSRQVCPVCK 334
C ICLD +D C H C PC +W +CP C+
Sbjct: 65 CLICLDPRIHKLAHVIKDYTYLPCCHQVCHKPCFWKWAHRHQGEVICPHCR 115
>SB_37498| Best HMM Match : MATH (HMM E-Value=1.8e-28)
Length = 562
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +2
Query: 191 DERMLECNICLDTARDAVVSMCGHLFCWPC 280
DER C IC ++ + + CGH C C
Sbjct: 29 DERF-RCTICKHVLQEPLQTTCGHRICESC 57
>SB_29658| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0012)
Length = 450
Score = 27.9 bits (59), Expect = 9.0
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Frame = +2
Query: 203 LECNICL----DTARDAVVSMCGHLFCWPCLHQWLETRPSRQVCPVCKAAISRE 352
L C IC D R + CGH C CL Q +T+ CP +A ++ +
Sbjct: 12 LTCPICYHEFEDRQRGPISLACGHTICKACLSQLHKTQ-----CPFDQATVNTD 60
>SB_5871| Best HMM Match : IBR (HMM E-Value=0.00018)
Length = 843
Score = 27.9 bits (59), Expect = 9.0
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = +2
Query: 254 CGHLFCWPCLHQWLETRPSRQVCPVCK 334
C H FC C+ + E + CP CK
Sbjct: 351 CSHTFCTECIMKIKELQGDVVECPTCK 377
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,243,445
Number of Sequences: 59808
Number of extensions: 576260
Number of successful extensions: 1914
Number of sequences better than 10.0: 135
Number of HSP's better than 10.0 without gapping: 1636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1897
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1962001171
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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