Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc8a20
(741 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284; Eukary... 348 7e-95
UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5; Eukaryot... 316 5e-85
UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2; Cyt... 274 2e-72
UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26; Eukaryo... 270 2e-71
UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S riboso... 247 3e-64
UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal ... 239 4e-62
UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1; Encephal... 225 1e-57
UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S riboso... 200 3e-50
UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n... 180 3e-44
UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5; Sulfolo... 169 8e-41
UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6; Euryarc... 166 4e-40
UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n... 163 3e-39
UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34; Archae... 163 3e-39
UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7; Archaea... 159 9e-38
UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3; Halobac... 157 2e-37
UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus N... 154 2e-36
UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|R... 150 4e-35
UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum l... 149 5e-35
UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1; Cenarch... 144 2e-33
UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured m... 140 2e-32
UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n... 139 8e-32
UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 ... 137 3e-31
UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1; Nanoarc... 132 7e-30
UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella... 132 1e-29
UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n... 131 2e-29
UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n... 125 1e-27
UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length... 124 3e-27
UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, wh... 123 4e-27
UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 119 7e-26
UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n... 117 3e-25
UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1; ... 111 2e-23
UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8; Euthe... 109 5e-23
UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep... 108 2e-22
UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n... 107 2e-22
UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal ... 89 1e-16
UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2... 89 1e-16
UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2; Firmicut... 86 1e-15
UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3; Fusobact... 86 1e-15
UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 85 2e-15
UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiel... 82 1e-14
UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 82 2e-14
UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3; Mycoplas... 81 4e-14
UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17; Bacteri... 79 9e-14
UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast p... 78 2e-13
UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6; Bacteria... 77 5e-13
UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n... 77 6e-13
UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S riboso... 75 2e-12
UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1; Ch... 73 6e-12
UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 73 7e-12
UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellula... 73 7e-12
UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2; Deinococ... 72 1e-11
UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5; Bacteria... 71 2e-11
UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;... 71 3e-11
UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole ge... 71 3e-11
UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 70 5e-11
UniRef50_Q50301 Cluster: 30S ribosomal protein S5; n=2; Mycoplas... 69 9e-11
UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n... 69 2e-10
UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128; Bacter... 66 6e-10
UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep... 66 9e-10
UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40; Bacteri... 66 9e-10
UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellul... 64 5e-09
UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellula... 63 8e-09
UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9; Firmicut... 62 1e-08
UniRef50_Q7MTN0 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 62 2e-08
UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8; Bacteria... 62 2e-08
UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellul... 61 3e-08
UniRef50_Q7UN03 Cluster: 30S ribosomal protein S5; n=3; Bacteria... 60 6e-08
UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S riboso... 58 2e-07
UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae ... 58 2e-07
UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7; Chlamydi... 58 2e-07
UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 56 7e-07
UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11; Bacteri... 56 9e-07
UniRef50_Q4FLN5 Cluster: 30S ribosomal protein S5; n=4; Ricketts... 55 2e-06
UniRef50_Q2GEC2 Cluster: 30S ribosomal protein S5; n=1; Neoricke... 55 2e-06
UniRef50_A4S3U8 Cluster: Predicted protein; n=2; Ostreococcus|Re... 54 3e-06
UniRef50_A0CLK5 Cluster: Chromosome undetermined scaffold_20, wh... 53 6e-06
UniRef50_A3BJ14 Cluster: Putative uncharacterized protein; n=3; ... 51 3e-05
UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;... 51 3e-05
UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondr... 50 6e-05
UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis gr... 49 1e-04
UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1; N... 49 1e-04
UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1; ... 48 2e-04
UniRef50_Q6CAL1 Cluster: Similar to sp|P33759 Saccharomyces cere... 48 3e-04
UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1; ... 46 7e-04
UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1; ... 46 0.001
UniRef50_Q4PBG0 Cluster: Putative uncharacterized protein; n=1; ... 42 0.016
UniRef50_A6S1U3 Cluster: Putative uncharacterized protein; n=2; ... 42 0.016
UniRef50_UPI0000DA3DCA Cluster: PREDICTED: similar to 40S riboso... 41 0.028
UniRef50_UPI00015B5E49 Cluster: PREDICTED: similar to 28S riboso... 39 0.11
UniRef50_Q7R438 Cluster: GLP_254_52826_53383; n=1; Giardia lambl... 39 0.11
UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1; ... 37 0.45
UniRef50_Q7PLU5 Cluster: CG40049-PB, isoform B; n=3; Drosophila ... 36 1.0
UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial... 36 1.0
UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium falciparu... 35 2.4
UniRef50_UPI0000F2DE4B Cluster: PREDICTED: similar to thioredoxi... 33 5.6
UniRef50_Q2JDT3 Cluster: Exodeoxyribonuclease III; n=30; Bacteri... 33 5.6
UniRef50_Q9RS86 Cluster: Ribosomal protein S2-related protein; n... 33 7.4
UniRef50_A4MJQ3 Cluster: Heat shock protein DnaJ domain protein;... 33 7.4
UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella ve... 33 7.4
UniRef50_Q29F16 Cluster: GA16916-PA; n=1; Drosophila pseudoobscu... 33 9.7
>UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284;
Eukaryota|Rep: 40S ribosomal protein S2 - Homo sapiens
(Human)
Length = 293
Score = 348 bits (856), Expect = 7e-95
Identities = 164/190 (86%), Positives = 174/190 (91%)
Frame = +1
Query: 172 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 351
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPVQ
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQ 113
Query: 352 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 531
KQTRAGQRTRFKAFVAIGD NGH+GLGVKCSKEVATAIRGAIILAKLS++PVRRGYWGNK
Sbjct: 114 KQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNK 173
Query: 532 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTL 711
IGKPHTVPCKVTG+CGSV VRLIPAPRGTGIVSAPVPKKLL MAG+ DCYTSARG T TL
Sbjct: 174 IGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATL 233
Query: 712 GNFAKATYAA 741
GNFAKAT+ A
Sbjct: 234 GNFAKATFDA 243
>UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5;
Eukaryota|Rep: 40S ribosomal protein S2 -
Schizosaccharomyces pombe (Fission yeast)
Length = 253
Score = 316 bits (775), Expect = 5e-85
Identities = 137/190 (72%), Positives = 171/190 (90%)
Frame = +1
Query: 172 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 351
++++KEWVPVTKLGRLV+ GKI +E IYL+SLPIKE++I+D+FL P LNDEV+K++PVQ
Sbjct: 28 RDEEKEWVPVTKLGRLVKAGKIKSIEEIYLYSLPIKEYQIVDYFL-PRLNDEVMKVVPVQ 86
Query: 352 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 531
KQTRAGQRTRFKAFV IGD++GH+GLG+KC+KEVATAIRGAII+ KLS++P+RRGYWG
Sbjct: 87 KQTRAGQRTRFKAFVVIGDSDGHVGLGIKCAKEVATAIRGAIIMGKLSIMPIRRGYWGTA 146
Query: 532 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTL 711
+G PHTVP KV+GKCGSVTVRL+PAPRG G+V+APV K+ LQ+AG++DCYT +RGST TL
Sbjct: 147 LGDPHTVPVKVSGKCGSVTVRLVPAPRGAGLVAAPVTKRFLQLAGIEDCYTQSRGSTKTL 206
Query: 712 GNFAKATYAA 741
GNF KA +AA
Sbjct: 207 GNFVKAAFAA 216
>UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2; n=12;
Eukaryota|Rep: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2 -
Ostreococcus lucimarinus CCE9901
Length = 273
Score = 274 bits (671), Expect = 2e-72
Identities = 127/189 (67%), Positives = 154/189 (81%)
Frame = +1
Query: 175 EDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQK 354
+D+ WVP TKLGRLV++GKI LE I+LFSLPIKE +I++ F+G L DEV+KI PVQK
Sbjct: 45 DDKDVWVPCTKLGRLVQQGKIKSLEHIFLFSLPIKEHQIVEHFIGGELKDEVMKICPVQK 104
Query: 355 QTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKI 534
QT AGQR RFKAFV +GD NGHIGLGVK KEVA +I+G++ILAKL+++PVRRGYWG+K+
Sbjct: 105 QTTAGQRMRFKAFVVVGDCNGHIGLGVKACKEVAHSIQGSMILAKLNIVPVRRGYWGSKL 164
Query: 535 GKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLG 714
G+PHT+P KV GKCGSV VRLIPAPRG GIV++ KK+L MAG+ D YT +RG T TLG
Sbjct: 165 GEPHTIPTKVHGKCGSVHVRLIPAPRGAGIVASGTVKKVLAMAGLHDVYTCSRGHTRTLG 224
Query: 715 NFAKATYAA 741
N KATY A
Sbjct: 225 NSVKATYEA 233
>UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26;
Eukaryota|Rep: 40S ribosomal protein S2 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 254
Score = 270 bits (663), Expect = 2e-71
Identities = 125/188 (66%), Positives = 152/188 (80%)
Frame = +1
Query: 178 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQ 357
++K WVPVTKLGRLV+ GKI +E I+L SLP+KEF+IID L P L DEV+ I PVQKQ
Sbjct: 31 EEKGWVPVTKLGRLVKAGKITTIEEIFLHSLPVKEFQIIDTLL-PGLQDEVMNIKPVQKQ 89
Query: 358 TRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIG 537
TRAGQRTRFKA V +GD+NGH+GLG+K +KEVA AIR II+AKLSV+P+RRGYWG +G
Sbjct: 90 TRAGQRTRFKAVVVVGDSNGHVGLGIKTAKEVAGAIRAGIIIAKLSVIPIRRGYWGTNLG 149
Query: 538 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 717
+PH++ K TGKCGSVTVRLIPAPRG+GIV++P KKLLQ+AGV+D YT + G T TL N
Sbjct: 150 QPHSLATKTTGKCGSVTVRLIPAPRGSGIVASPAVKKLLQLAGVEDVYTQSNGKTRTLEN 209
Query: 718 FAKATYAA 741
KA + A
Sbjct: 210 TLKAAFVA 217
>UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 237
Score = 247 bits (604), Expect = 3e-64
Identities = 116/138 (84%), Positives = 125/138 (90%)
Frame = +1
Query: 322 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 501
DEVLKIMPVQKQT AGQRTRF AFVAIGD NGH GLGVKCSKEVATAIR AIILAKLS++
Sbjct: 48 DEVLKIMPVQKQTCAGQRTRFTAFVAIGDYNGHFGLGVKCSKEVATAIREAIILAKLSIV 107
Query: 502 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCY 681
P+R+GYWGNKIGKP+TVPCKVTG CGSV V LIPAPRGTG+VSAPVPKKLL MAG+ DCY
Sbjct: 108 PLRQGYWGNKIGKPNTVPCKVTGHCGSVLVCLIPAPRGTGMVSAPVPKKLLMMAGIDDCY 167
Query: 682 TSARGSTGTLGNFAKATY 735
TSAR T +LGNFAKAT+
Sbjct: 168 TSARDCTASLGNFAKATF 185
>UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S2 - Macaca mulatta
Length = 272
Score = 239 bits (586), Expect = 4e-62
Identities = 114/139 (82%), Positives = 121/139 (87%)
Frame = +1
Query: 193 VPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQ 372
+PVTKLG L+ + KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPVQKQT AGQ
Sbjct: 1 MPVTKLGHLINDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTCAGQ 60
Query: 373 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTV 552
TRFKAFV IGD NGH+GL VKCSKEVATAIRGAIILAKLS++PV RGYWGNKIGKPHTV
Sbjct: 61 HTRFKAFVPIGDYNGHVGLSVKCSKEVATAIRGAIILAKLSIVPVCRGYWGNKIGKPHTV 120
Query: 553 PCKVTGKCGSVTVRLIPAP 609
PCKVTG+C SV V LIPAP
Sbjct: 121 PCKVTGRCSSVLVHLIPAP 139
>UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S2 -
Encephalitozoon cuniculi
Length = 242
Score = 225 bits (549), Expect = 1e-57
Identities = 105/190 (55%), Positives = 137/190 (72%)
Frame = +1
Query: 172 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 351
++++ EW+P T +GRLV+ KI LE I+ FS I+E EI+D G S+ +EVL I VQ
Sbjct: 15 RKEESEWIPKTAVGRLVKMLKITSLEQIFKFSHVIREPEIVDLLCGNSIKEEVLSIKSVQ 74
Query: 352 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 531
KQTRAGQ+TR KA V +GD GH+G+G K SKE A+AIRGAI AK ++ PVR G W
Sbjct: 75 KQTRAGQKTRIKAVVVVGDRKGHVGIGTKASKEAASAIRGAIARAKCAIRPVRLGLWDGA 134
Query: 532 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTL 711
GKPHTV CK +GKCG+ V++IPAPRGTGI+S V KK+ ++AG++D YT + G+T T
Sbjct: 135 QGKPHTVSCKGSGKCGTSVVQVIPAPRGTGIISGSVNKKIFELAGIKDLYTLSFGATSTT 194
Query: 712 GNFAKATYAA 741
NFAKA+ AA
Sbjct: 195 ENFAKASIAA 204
>UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 213
Score = 200 bits (488), Expect = 3e-50
Identities = 92/118 (77%), Positives = 101/118 (85%)
Frame = +1
Query: 373 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTV 552
+ RFKAFVAIGD+NG +G GVKCSKE ATAIRGA+ILAKLS+LPV RGYWGN+I KPHTV
Sbjct: 61 KIRFKAFVAIGDDNGQVGPGVKCSKEAATAIRGAVILAKLSILPVPRGYWGNEIRKPHTV 120
Query: 553 PCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAK 726
P KVTG+CGSV VRLIPAPRGTG VSAPVPKKLL MAG+ DCYTSARG T T G +
Sbjct: 121 PGKVTGRCGSVLVRLIPAPRGTGFVSAPVPKKLLMMAGIDDCYTSARGHTATWGTLPR 178
Score = 33.5 bits (73), Expect = 5.6
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +1
Query: 178 DQKEWVPVTKLGRLVREGKI 237
+ KEW+PVT LGRLV++ KI
Sbjct: 43 EDKEWIPVTGLGRLVKDMKI 62
>UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC060C UniRef100 entry -
Rattus norvegicus
Length = 206
Score = 180 bits (439), Expect = 3e-44
Identities = 101/167 (60%), Positives = 119/167 (71%)
Frame = +1
Query: 196 PVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQR 375
P +KLG LV++ +I L IYLFSLPIKE EIID FLG +L DEVLK +P QK TR GQ
Sbjct: 51 PASKLGCLVKD-EIKSLGEIYLFSLPIKETEIIDIFLGAALKDEVLKSLPEQKGTRVGQ- 108
Query: 376 TRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVP 555
+KA GD NGH+ G+ EVA I+ IIL KL ++PV RGY G+K KPHTV
Sbjct: 109 -YYKA----GDYNGHVITGL---DEVANTIQRVIILTKLPIVPVWRGYCGSKTSKPHTVL 160
Query: 556 CKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARG 696
CKVTG GSV++ LIPAPR T I SAP+PKKLL MAG+ DC+TSARG
Sbjct: 161 CKVTGH-GSVSLHLIPAPRDTVISSAPMPKKLLMMAGINDCHTSARG 206
>UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S5P -
Sulfolobus solfataricus
Length = 214
Score = 169 bits (410), Expect = 8e-41
Identities = 85/188 (45%), Positives = 126/188 (67%), Gaps = 2/188 (1%)
Frame = +1
Query: 184 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTR 363
+EW P T +G LV+EGKI ++ ++ +LPI E EI+D L P L EV+ I VQKQT
Sbjct: 11 EEWKPRTSIGSLVKEGKISSIKELFDRNLPITEPEIVDVLL-PKLKYEVVDIKVVQKQTD 69
Query: 364 AGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGY--WGNKIG 537
AG+ +R+K V +G+ +G++ +G +K++ AI+ AI AK++++PVRRG W G
Sbjct: 70 AGEISRYKVLVIMGNMDGYVSIGTGKAKQLRVAIQKAIRDAKMNIIPVRRGCGSWQCTCG 129
Query: 538 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 717
+PH++P KV GK GSV V L+PAP+GTG+V V K LL AG++D +++ +G T T N
Sbjct: 130 EPHSLPFKVVGKAGSVEVDLLPAPKGTGLVVGSVLKTLLTYAGIKDAWSTTKGETRTTEN 189
Query: 718 FAKATYAA 741
F +A Y+A
Sbjct: 190 FVRAGYSA 197
>UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S5P -
Methanococcus maripaludis
Length = 225
Score = 166 bits (404), Expect = 4e-40
Identities = 86/192 (44%), Positives = 123/192 (64%), Gaps = 2/192 (1%)
Frame = +1
Query: 172 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 351
K + + W P T++GR+V+EG I + I LP+ E EI+D L P L ++VL + VQ
Sbjct: 10 KFNTEAWEPKTQIGRMVKEGTISDISYIMDKGLPLLEPEIVDALL-PDLEEQVLDVKLVQ 68
Query: 352 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGY--WG 525
+ ++G+R R++A V +G+ NG++G+G+ SKEV AIR AI AKLS++ VR G W
Sbjct: 69 RMHKSGRRARYRATVVVGNKNGYVGVGMGKSKEVGPAIRKAIAHAKLSLIKVRVGCGSWE 128
Query: 526 NKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTG 705
G PH++P G CGSV V L+PAPRG G+V+ V K +L +AGV+D +T G T
Sbjct: 129 CGCGSPHSIPFTAKGACGSVKVELLPAPRGVGLVAGNVAKAVLGLAGVKDAWTKTFGDTR 188
Query: 706 TLGNFAKATYAA 741
T NFA+AT+ A
Sbjct: 189 TTYNFAEATFDA 200
>UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n=1;
Bos taurus|Rep: UPI000057EB46 UniRef100 entry - Bos
Taurus
Length = 258
Score = 163 bits (397), Expect = 3e-39
Identities = 95/185 (51%), Positives = 119/185 (64%)
Frame = +1
Query: 181 QKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQT 360
+ +W+P+TKLG LV+E KI LE IY FSL + + F P+ KQT
Sbjct: 51 EDKWLPITKLGCLVKEMKIKSLEEIYFFSLLSRNLRSLTFSWEH----------PLIKQT 100
Query: 361 RAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGK 540
Q+TRFKA V +G + GH+ LG+K S EVA IILAKLS++PV G ++ +
Sbjct: 101 CTDQQTRFKASVTVG-SYGHVSLGIKYSMEVA------IILAKLSIIPVETATGGKRL-E 152
Query: 541 PHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNF 720
PH VPC+VTG+CGS+ V LIPAPRGTG VSAPVP KLL MAG+ D +SA G T TLGNF
Sbjct: 153 PHMVPCRVTGRCGSLLVHLIPAPRGTGTVSAPVP-KLLMMAGIDDS-SSASGCTATLGNF 210
Query: 721 AKATY 735
KA +
Sbjct: 211 TKAIF 215
>UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34;
Archaea|Rep: 30S ribosomal protein S5P - Pyrococcus
furiosus
Length = 236
Score = 163 bits (397), Expect = 3e-39
Identities = 89/191 (46%), Positives = 120/191 (62%), Gaps = 6/191 (3%)
Frame = +1
Query: 187 EWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLN----DEVLKIMPVQK 354
EW P TKLG +V+EG+I + I+ IKE EIID L P +N EVL I +
Sbjct: 15 EWEPKTKLGMMVKEGQITDIHEIFRRGYQIKEPEIIDVLL-PEVNARENQEVLDIALTVR 73
Query: 355 QTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGY--WGN 528
T +G+R RF+ A+G+ +G++GLG+ KEV AIR AI AKL+++ ++RG W
Sbjct: 74 MTDSGRRVRFRVLAAVGNRDGYVGLGIGHGKEVGIAIRKAINYAKLNIIEIKRGCGSWEC 133
Query: 529 KIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGT 708
+ +PH+VP V GK GSV VRLIP PRG G+V V KK+L++AGVQD ++ G T T
Sbjct: 134 RCRRPHSVPFAVEGKEGSVRVRLIPGPRGLGLVIGDVGKKILRLAGVQDVWSQTFGETRT 193
Query: 709 LGNFAKATYAA 741
NFAKA + A
Sbjct: 194 TVNFAKAVFNA 204
>UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7;
Archaea|Rep: 30S ribosomal protein S5P - Picrophilus
torridus
Length = 221
Score = 159 bits (385), Expect = 9e-38
Identities = 80/188 (42%), Positives = 117/188 (62%), Gaps = 2/188 (1%)
Frame = +1
Query: 184 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTR 363
+EW P T+LGRLV G+I + LP+KE++I+D+ + P L DEV+ I Q+ T
Sbjct: 3 EEWTPRTELGRLVANGEIKTISEALHSKLPLKEYQIVDYLI-PDLKDEVINIERAQRMTD 61
Query: 364 AGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGY--WGNKIG 537
+G+R + +G+ NG++G+G +KE A AI+ AI AKL+++ ++RG W G
Sbjct: 62 SGRRMNYSITAVVGNGNGYVGVGRGKAKEAAPAIKKAIDNAKLNIIEIKRGCGSWECGCG 121
Query: 538 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 717
KPHT+P V GK GSV+V L PAP+G G+ V K +L+MAG+ D + A G T T N
Sbjct: 122 KPHTLPFLVNGKSGSVSVTLKPAPQGVGLAVGDVVKVILRMAGIDDAWGFAAGHTKTTVN 181
Query: 718 FAKATYAA 741
+A AT+ A
Sbjct: 182 YALATFDA 189
>UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3;
Halobacteriaceae|Rep: 30S ribosomal protein S5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 212
Score = 157 bits (382), Expect = 2e-37
Identities = 81/186 (43%), Positives = 117/186 (62%), Gaps = 2/186 (1%)
Frame = +1
Query: 190 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAG 369
W P T+LG+ V EG+ID ++ LP+KE E++D + P L DEVL I VQ+ T +G
Sbjct: 7 WEPRTRLGKQVVEGEIDSMQEALNSGLPLKESEVVDQLV-PDLEDEVLDINMVQRMTDSG 65
Query: 370 QRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGY--WGNKIGKP 543
+R +F+ VA+G+ +G IG +V AI+ AI +AKL+++ V RG W G+P
Sbjct: 66 RRVKFRCVVAVGNRDGLIGYAEGRDDQVGGAIQKAIDIAKLNIIDVSRGCGSWECGCGRP 125
Query: 544 HTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFA 723
HTV + GK GSV V L PAPRG G+ +K+L++AG++D +T + G+T T NFA
Sbjct: 126 HTVALRTEGKAGSVEVELQPAPRGLGLAGGETVRKVLELAGIEDIWTRSSGNTRTTVNFA 185
Query: 724 KATYAA 741
KAT+ A
Sbjct: 186 KATFNA 191
>UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 238
Score = 154 bits (373), Expect = 2e-36
Identities = 83/186 (44%), Positives = 119/186 (63%), Gaps = 2/186 (1%)
Frame = +1
Query: 178 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQ 357
+++ WVP T LG+ V G+I LE I L I+E II L P L EV+ + +QK
Sbjct: 42 EEEVWVPKTILGQKVASGEISSLEEIIELGLRIQEAGIIKKLL-PDLKSEVVDVGIIQKM 100
Query: 358 TRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGY--WGNK 531
T GQ TRFKA VA G+ NG++G+G SK++ AI A A L+V P++ G W +
Sbjct: 101 TSNGQSTRFKAIVATGNENGYLGIGQGKSKQMRIAIEKATNAAYLNVNPIKMGCGSWECR 160
Query: 532 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTL 711
+ H+VP KV GK GSVT+ +IPAPRG G+V+ K+LL++AG++D +T+A+GST T+
Sbjct: 161 CDQKHSVPFKVKGKGGSVTIEIIPAPRGLGLVAGGKIKRLLELAGLKDAWTTAKGSTPTM 220
Query: 712 GNFAKA 729
+ +KA
Sbjct: 221 NSTSKA 226
>UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|Rep:
Ribosomal protein S2 - Rattus norvegicus (Rat)
Length = 121
Score = 150 bits (363), Expect = 4e-35
Identities = 71/86 (82%), Positives = 76/86 (88%)
Frame = +1
Query: 172 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 351
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPVQ
Sbjct: 29 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQ 88
Query: 352 KQTRAGQRTRFKAFVAIGDNNGHIGL 429
KQTRAGQRTRFKAFVAIGD NGH+GL
Sbjct: 89 KQTRAGQRTRFKAFVAIGDYNGHVGL 114
>UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S5 -
Halorubrum lacusprofundi ATCC 49239
Length = 265
Score = 149 bits (362), Expect = 5e-35
Identities = 78/186 (41%), Positives = 118/186 (63%), Gaps = 2/186 (1%)
Frame = +1
Query: 190 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAG 369
W P T+LGR V+ G I +E LP+KE EI+D L P L DEVL I VQ+ T +G
Sbjct: 58 WEPRTRLGRKVQNGDISSMEQALDSGLPLKEAEIVDQLL-PGLEDEVLDINMVQRMTDSG 116
Query: 370 QRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGY--WGNKIGKP 543
+R +F+ VA+G+ +G++G +V AI+ AI +AKL+++ V RG W ++ G
Sbjct: 117 RRVKFRCVVAVGNRDGYLGYAQARDDQVGGAIQKAIDVAKLNIIEVDRGSGSWEDQPGGT 176
Query: 544 HTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFA 723
+++ K GK GSVTV + PAP+G G+ +A + +L++AGV+D +T++ G+T T N A
Sbjct: 177 NSLTRKAEGKAGSVTVEIQPAPQGLGLAAAETVRNILELAGVEDAWTNSDGNTRTTVNLA 236
Query: 724 KATYAA 741
KAT+ A
Sbjct: 237 KATFNA 242
>UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1;
Cenarchaeum symbiosum|Rep: 30S ribosomal protein S5P -
Cenarchaeum symbiosum
Length = 219
Score = 144 bits (350), Expect = 2e-33
Identities = 79/186 (42%), Positives = 115/186 (61%), Gaps = 2/186 (1%)
Frame = +1
Query: 178 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQ 357
++ WVP T LG+ V G+I LE I I+E II L P L EV+ + +QK
Sbjct: 23 EEAPWVPKTALGKRVNAGEITSLEEIQEAGARIQESGIIKKLL-PDLKTEVVDVGIIQKM 81
Query: 358 TRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGY--WGNK 531
T GQ TRFKA VA G+ NG++G+G +K++ AI A A L+V P++ G W +
Sbjct: 82 TSNGQSTRFKAIVAAGNENGYLGIGQGKAKQMRIAIEKANNQALLNVGPIKLGCGSWECR 141
Query: 532 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTL 711
+ H+VP KV GK GSV + ++PAPRG G+V+ ++LL++AG++D YT+A+GST T
Sbjct: 142 CDQKHSVPFKVRGKGGSVVIEILPAPRGLGLVAGGKIRRLLELAGLKDAYTTAKGSTPTT 201
Query: 712 GNFAKA 729
+ +KA
Sbjct: 202 NSTSKA 207
>UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein S5 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 202
Score = 140 bits (340), Expect = 2e-32
Identities = 73/177 (41%), Positives = 112/177 (63%), Gaps = 2/177 (1%)
Frame = +1
Query: 217 LVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFV 396
+V +GKI E LPI+E EI+D L P L+D+VL + +Q+ T +G+R RF
Sbjct: 1 MVADGKILSYEEALATGLPIREVEIVDALL-PGLDDDVLAVNMIQRMTDSGRRVRFNVLC 59
Query: 397 AIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR--GYWGNKIGKPHTVPCKVTG 570
+G+++G++GL + KEVA+ IR AI AKL+++PV R G W + G +VP K+TG
Sbjct: 60 VVGNSDGYVGLAICKGKEVASTIRKAIDKAKLNMIPVMRGNGSWESGGGPGTSVPLKITG 119
Query: 571 KCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAKATYAA 741
+ GS V L+PAP G G+V + +++L +AGV D ++ + G T T N+A+AT+ A
Sbjct: 120 RSGSTRVTLMPAPAGKGLVVSDYGRRVLTLAGVTDVWSRSAGQTRTTINYAQATFNA 176
>UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB449D UniRef100
entry - Canis familiaris
Length = 196
Score = 139 bits (336), Expect = 8e-32
Identities = 78/147 (53%), Positives = 95/147 (64%)
Frame = +1
Query: 295 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 474
D L ++ + ++I +K+T AGQ+TRFKAFV D NGH+ L EVATAIRGA
Sbjct: 1 DMSLLAAVKGKGIRIKSYKKKTHAGQQTRFKAFVVFRDYNGHVSL------EVATAIRGA 54
Query: 475 IILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLL 654
IIL + S+ G+ GNKI KPHTV C+VT SV V I APRGT I+SAPVPKKLL
Sbjct: 55 IILDRSSIAIAWGGWSGNKIAKPHTVSCRVTRLYCSVLVHHISAPRGTDILSAPVPKKLL 114
Query: 655 QMAGVQDCYTSARGSTGTLGNFAKATY 735
+MA + D + ARG T L N KATY
Sbjct: 115 RMASIDDGDSLARGCTAILDNVIKATY 141
>UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 -
Mus musculus (Mouse); n=3; Murinae|Rep: RBM27_MOUSE
Isoform 2 of Q5SFM8 - Mus musculus (Mouse) - Rattus
norvegicus
Length = 266
Score = 137 bits (331), Expect = 3e-31
Identities = 94/188 (50%), Positives = 112/188 (59%)
Frame = +1
Query: 178 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQ 357
+ K+W+PV KL LVR + L FSL K+ II FFL SL DE IMPVQ Q
Sbjct: 59 EDKQWMPVIKLCHLVRTWRYRDLP----FSLLNKKSMIIGFFLRTSLRDE---IMPVQTQ 111
Query: 358 TRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIG 537
T R FK FV+I D + H+ L KCSK+ ATAI VL V +G ++G
Sbjct: 112 TWLPSRP-FKDFVSIRDYSSHVDLDDKCSKKTATAI----------VL-VWKGTRETRLG 159
Query: 538 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 717
TV CKVTG+C SV + LIP R I+SAPVPKKLL +A + DCYTSARG T TL N
Sbjct: 160 SL-TVSCKVTGQCVSVLICLIPPTRN--IISAPVPKKLLLLANIDDCYTSARGCTATLDN 216
Query: 718 FAKATYAA 741
F KAT+ A
Sbjct: 217 FDKATFNA 224
>UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S5P -
Nanoarchaeum equitans
Length = 231
Score = 132 bits (320), Expect = 7e-30
Identities = 78/201 (38%), Positives = 114/201 (56%), Gaps = 15/201 (7%)
Frame = +1
Query: 184 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPV----- 348
+EW P TKLGRLV+EGKI ++ I I+E EI+D L P+L E +K +
Sbjct: 5 EEWQPKTKLGRLVKEGKITNIDEILSNKYVIREPEIVDVLL-PNLEVEFMKWRIIRGKFR 63
Query: 349 --------QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLP 504
QK+T G +TR++ +GD +GH+G+G+ S ++ A AI AKL+++
Sbjct: 64 SKKPYRMAQKKTAEGNKTRYEVIAIVGDKDGHVGVGLGRSSDLLIAREKAINRAKLNIIK 123
Query: 505 VRRGY--WGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDC 678
V RG W G PH++P +V GK GSV V L PAP+G GIV+ KK+ ++AG++D
Sbjct: 124 VARGCGSWECACGAPHSIPYQVEGKSGSVRVILKPAPKGVGIVADDEIKKIFRLAGIKDV 183
Query: 679 YTSARGSTGTLGNFAKATYAA 741
+ + G T T N A + A
Sbjct: 184 WVRSFGKTKTKMNHVFAVFDA 204
>UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella
natans|Rep: Ribosomal protein S2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 266
Score = 132 bits (318), Expect = 1e-29
Identities = 62/166 (37%), Positives = 107/166 (64%)
Frame = +1
Query: 244 LESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHI 423
L+ ++L + ++++ G SL +V++ + V + T++G++ + K V +GD +GH+
Sbjct: 84 LDYLFLKRIFFHNNKLVNILFGKSLKYKVIQNLMVSRLTKSGRQYKKKVAVLVGDLDGHV 143
Query: 424 GLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIP 603
GLGVK S + I+ A+ AKL++ +RRGYW + GKP+T+ K +GK GSV V + P
Sbjct: 144 GLGVKSSMDSKAGIKAALRKAKLAITKIRRGYWEIEEGKPNTIKYKTSGKAGSVVVCIKP 203
Query: 604 APRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAKATYAA 741
AP+GTGIV++ +L+++G++DC+T + G T + N KAT+ A
Sbjct: 204 APKGTGIVASKFQLNVLKISGIRDCFTKSFGRTKSSFNTIKATFNA 249
>UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n=1;
Mus musculus|Rep: UPI0000D62CF0 UniRef100 entry - Mus
musculus
Length = 215
Score = 131 bits (317), Expect = 2e-29
Identities = 92/184 (50%), Positives = 113/184 (61%), Gaps = 1/184 (0%)
Frame = +1
Query: 193 VPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQ 372
+PVTKLG LV++ KI L P+KEFEI DFFL SL D+VLKI+P+ + R Q
Sbjct: 1 IPVTKLGCLVKDIKIKYL--------PVKEFEINDFFLEASLKDKVLKIIPLSR-FRNDQ 51
Query: 373 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS-VLPVRRGYWGNKIGKPHT 549
TRF +F I + GH G+GVKCSK+V TA+ + + LS LP R Y GN I KP T
Sbjct: 52 WTRFNSFDTI-NYGGHNGIGVKCSKKVGTAVGLSSWSSFLSSCLP--RDYCGNNIRKP-T 107
Query: 550 VPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAKA 729
PCK TG S++ L P IVS VP+KL+ A + CYTSAR T TLGN AKA
Sbjct: 108 YPCKRTG--WSISF-LFPETLAF-IVSVLVPRKLMLRASIDSCYTSARSYTVTLGNIAKA 163
Query: 730 TYAA 741
T+ A
Sbjct: 164 TFDA 167
>UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBFACC UniRef100 entry -
Rattus norvegicus
Length = 172
Score = 125 bits (302), Expect = 1e-27
Identities = 67/128 (52%), Positives = 80/128 (62%)
Frame = +1
Query: 349 QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGN 528
QKQT+ GQ+ R K F GD NGH+GLG+KCSKEVATA +G + +L
Sbjct: 1 QKQTQTGQKNRLKTFCCYGDYNGHVGLGIKCSKEVATAFQGLWVKMQLGE---------T 51
Query: 529 KIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGT 708
++ + V KVT GSV V LIPAPRGTGIVSAPV K L AG+ +CY SAR T T
Sbjct: 52 RLSRSTLVQYKVTSHYGSVLVHLIPAPRGTGIVSAPVLTKFLMNAGIYNCYISARCYTAT 111
Query: 709 LGNFAKAT 732
L NF+K T
Sbjct: 112 LYNFSKPT 119
>UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length
enriched library, clone:1200003H09 product:ribosomal
protein S2, full insert sequence; n=13; Eutheria|Rep:
Adult male lung cDNA, RIKEN full-length enriched
library, clone:1200003H09 product:ribosomal protein S2,
full insert sequence - Mus musculus (Mouse)
Length = 235
Score = 124 bits (298), Expect = 3e-27
Identities = 59/72 (81%), Positives = 63/72 (87%)
Frame = +1
Query: 172 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 351
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPVQ
Sbjct: 54 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQ 113
Query: 352 KQTRAGQRTRFK 387
KQTRAGQRTRFK
Sbjct: 114 KQTRAGQRTRFK 125
Score = 113 bits (271), Expect = 6e-24
Identities = 52/61 (85%), Positives = 55/61 (90%)
Frame = +1
Query: 559 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAKATYA 738
KVTG+CGSV VRLIPAPRGTGIVSAPVPKKLL MAG+ DCYTSARG T TLGNFAKAT+
Sbjct: 125 KVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFD 184
Query: 739 A 741
A
Sbjct: 185 A 185
>UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_75,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 327
Score = 123 bits (297), Expect = 4e-27
Identities = 59/96 (61%), Positives = 78/96 (81%)
Frame = +1
Query: 181 QKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQT 360
++EWVP+TKLGRLV+ GKI LE+I+ FS+PIKE++I+D FL +L +E L I PVQKQT
Sbjct: 61 EQEWVPLTKLGRLVKGGKIKSLETIFQFSIPIKEYQIVDHFL-KTLKEEPLAIGPVQKQT 119
Query: 361 RAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 468
AGQ+TRFKA+V +GD++ HIGLG K +KEV AI+
Sbjct: 120 CAGQKTRFKAYVVVGDSHQHIGLGWKSAKEVQGAIQ 155
Score = 43.6 bits (98), Expect = 0.005
Identities = 23/61 (37%), Positives = 29/61 (47%)
Frame = +3
Query: 501 TSSKRLLG*QDRKATHRPLQGHRQVWFCNSPADSCPSWYWNCVCASS*EASSDGWCTGLL 680
+S KR+LG QDR TH P+Q R+ S S YW E ++GW LL
Sbjct: 169 SSQKRILGKQDRLTTHSPMQSDRKGRISQSQIGSSTQRYWYSCSHHIQEGLTNGWYPRLL 228
Query: 681 H 683
H
Sbjct: 229 H 229
>UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome F of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 262
Score = 119 bits (287), Expect = 7e-26
Identities = 71/190 (37%), Positives = 112/190 (58%), Gaps = 2/190 (1%)
Frame = -1
Query: 741 GSICGFSKISQGAS*TTS*GVAVLYTSHLKKLLRNWRRHNSSTTRGRNQPDCYRTTLAGD 562
G+ G + Q + T+ GV + TS L +LL +W ++ T+ NQ + TTL
Sbjct: 40 GNESGLQSVFQSSGGTSRRGVDIFNTSQLHQLLDSWGGDDTGTSWSWNQSNGNGTTLTRG 99
Query: 561 LARDGVWLSDLVTPVTSSNW*NRQLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCLE 382
L GV L+ + TPVTSS+W N QL D++ S+G+ +FL+ L+TQT++TV V N + LE
Sbjct: 100 LGSQGVRLTQVGTPVTSSDWDNGQLGDDDTGSDGTSNFLSGLNTQTDVTVGVTNDDDSLE 159
Query: 381 TCALSGTCLFLYRHDL*NLIIQGRAEEEINDLEFFDW*RKQVNALEFVDFSFANKTAEFG 202
+ +L+ + L L R D+ N I+Q ++ +NDLEF DW R Q + + D + +++ + G
Sbjct: 160 SGSLTSSGLLLDRLDVHNFILQ-VWQQLVNDLEFLDWQRVQEDFFDGRDLAGLHQSTQLG 218
Query: 201 DRNP--LFLV 178
+ NP FLV
Sbjct: 219 NWNPTLFFLV 228
>UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC004A UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 117 bits (281), Expect = 3e-25
Identities = 79/167 (47%), Positives = 94/167 (56%), Gaps = 1/167 (0%)
Frame = +1
Query: 172 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 351
K + K WV + LG LV+E KI LES FS +II+FFLG L DEVL+ M Q
Sbjct: 18 KAEDKAWVFINNLGCLVKE-KIKSLESCSPFS----SSDIIEFFLGEHLKDEVLRTMLAQ 72
Query: 352 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 531
Q RTR K F + + L V CSKEV TA + AI L + + GY GNK
Sbjct: 73 NQ-----RTRIKVFFFLTIRSPMTTL-VNCSKEVGTAAQRAITLLSF-LFSTQTGYKGNK 125
Query: 532 IGKPHTVPCKVTG-KCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGV 669
IG PHT+PC VT + V V L APRGTG VSA VPKKL +A +
Sbjct: 126 IGNPHTIPCDVTATEKNLVLVCLTTAPRGTGTVSASVPKKLPLLASI 172
>UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 181
Score = 111 bits (266), Expect = 2e-23
Identities = 59/131 (45%), Positives = 85/131 (64%)
Frame = -1
Query: 564 DLARDGVWLSDLVTPVTSSNW*NRQLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCL 385
+LA GV +DLVTPV S++ N QL +D+S ++G G FLAAL QT++ V V +G++ L
Sbjct: 18 NLAGHGVGFTDLVTPVASTHRNNGQLGQDDSPTDGGGHFLAALDAQTDVAVAVTDGDEGL 77
Query: 384 ETCALSGTCLFLYRHDL*NLIIQGRAEEEINDLEFFDW*RKQVNALEFVDFSFANKTAEF 205
E L+GT L L HDL + ++Q A+EEI+DLE F+ R QV+ L+ D + A++ +
Sbjct: 78 EARTLTGTGLLLDGHDLQHFVLQRAAQEEIDDLELFNGQRVQVDLLQGADLAIAHQATQL 137
Query: 204 GDRNPLFLVFL 172
G NP VFL
Sbjct: 138 GHWNPFLRVFL 148
>UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8;
Eutheria|Rep: ribosomal protein S2 - Rattus norvegicus
Length = 233
Score = 109 bits (263), Expect = 5e-23
Identities = 53/72 (73%), Positives = 58/72 (80%)
Frame = +1
Query: 172 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 351
K + KEW+P TKLG LV++ KI LE IYLFSLPIK EIIDFFLG SL +EVLK MPVQ
Sbjct: 54 KAEDKEWIPFTKLGHLVKDMKIKSLEEIYLFSLPIKGSEIIDFFLGASLKNEVLKTMPVQ 113
Query: 352 KQTRAGQRTRFK 387
KQTRAGQ TRFK
Sbjct: 114 KQTRAGQWTRFK 125
Score = 99.1 bits (236), Expect = 1e-19
Identities = 48/61 (78%), Positives = 51/61 (83%)
Frame = +1
Query: 559 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAKATYA 738
KVTG+CGSV VRL APRGTGIVSAPVPKKLL MA + DCYT ARG T TLGNFAKAT+
Sbjct: 125 KVTGRCGSVLVRLFSAPRGTGIVSAPVPKKLLMMA-IDDCYTLARGCTATLGNFAKATFD 183
Query: 739 A 741
A
Sbjct: 184 A 184
>UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep:
MGC27348 protein - Homo sapiens (Human)
Length = 172
Score = 108 bits (259), Expect = 2e-22
Identities = 53/65 (81%), Positives = 56/65 (86%)
Frame = +1
Query: 232 KIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 411
KI LE IYLFSLPIKE EIIDFFLG SL DEVLKIMPV+K+TRAGQRTRFKAFVAI D
Sbjct: 2 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVRKETRAGQRTRFKAFVAIRDY 61
Query: 412 NGHIG 426
NG+ G
Sbjct: 62 NGYAG 66
Score = 69.7 bits (163), Expect = 7e-11
Identities = 40/113 (35%), Positives = 56/113 (49%), Gaps = 1/113 (0%)
Frame = +3
Query: 405 RQQRSYWFGCEVQQGSRHCHSRRYYPC*VVCFTSSKRLLG*QDRKATHRPLQGHRQVWFC 584
R Y EV QG H R ++P + ++RLLG QDR+A HRPLQG R + C
Sbjct: 59 RDYNGYAGRVEVLQGGGRRHPRGHHPDQALHCHRAQRLLGEQDRQAPHRPLQGDRPLRLC 118
Query: 585 NSPADSCPSWYWNCVCASS*EASSDGWCTGLLHLSSWFNWHLGKFC*SHI-CC 740
+W+ + + + EA+ D W LLHLS + H G+ H+ CC
Sbjct: 119 AGALHPRAQGHWHRLSSCAQEAAHDSWYLRLLHLSQGLHCHPGQLRQRHLGCC 171
>UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000502977 UniRef100 entry -
Rattus norvegicus
Length = 140
Score = 107 bits (258), Expect = 2e-22
Identities = 52/73 (71%), Positives = 56/73 (76%)
Frame = +1
Query: 523 GNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 702
GNKIGK H V CKVTG CGSV V LIPA RGTGI SAPVP K L MAG+ DCYTSARG T
Sbjct: 7 GNKIGKTHIVLCKVTGCCGSVLVHLIPAHRGTGISSAPVPTKPLMMAGIDDCYTSARGCT 66
Query: 703 GTLGNFAKATYAA 741
+L FA+AT+ A
Sbjct: 67 ASLDYFAQATFDA 79
>UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Pan troglodytes|Rep: PREDICTED: similar
to ribosomal protein S2 - Pan troglodytes
Length = 223
Score = 88.6 bits (210), Expect = 1e-16
Identities = 46/93 (49%), Positives = 64/93 (68%)
Frame = +1
Query: 220 VREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVA 399
V++ K+ L+ +YLFSLPIKEFE+ DF LG L D+VLK+M VQKQ +AG+R RFK V
Sbjct: 132 VKDMKMKSLK-VYLFSLPIKEFEVTDFLLGVPLKDKVLKLMFVQKQPKAGRRIRFKVIVT 190
Query: 400 IGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 498
I D N ++ LGV+ KE+ A+ +L+ + V
Sbjct: 191 IRDCNDNVSLGVEWPKELLIAVCRTNVLSIILV 223
>UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2
protein - Homo sapiens (Human)
Length = 97
Score = 88.6 bits (210), Expect = 1e-16
Identities = 40/47 (85%), Positives = 42/47 (89%)
Frame = +1
Query: 601 PAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAKATYAA 741
PAPRGTGIVSAPVPKKLL MAG+ DCYTSARG T TLGNFAKAT+ A
Sbjct: 1 PAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDA 47
>UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2;
Firmicutes|Rep: 30S ribosomal protein S5 - Ureaplasma
parvum (Ureaplasma urealyticum biotype 1)
Length = 203
Score = 85.8 bits (203), Expect = 1e-15
Identities = 49/140 (35%), Positives = 79/140 (56%)
Frame = +1
Query: 313 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 492
+ + V+KI + K T+ G+ RF A V IGD NG +G G+ S EV AI+ AI A
Sbjct: 48 NFEERVVKIKRISKTTKGGRMMRFSALVVIGDKNGTVGFGMGKSIEVPDAIKKAIKNANN 107
Query: 493 SVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQ 672
+++ V++ K ++ V G+ G+ V L+PAP GTGI++ + ++++AG
Sbjct: 108 NLIKVKQ-------TKKGSIYHDVNGRHGAAKVMLLPAPEGTGIIAGGPVRAVVELAGFT 160
Query: 673 DCYTSARGSTGTLGNFAKAT 732
D YT +RG+ + N +AT
Sbjct: 161 DIYTKSRGANAPM-NVIRAT 179
>UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3;
Fusobacterium nucleatum|Rep: 30S ribosomal protein S5 -
Fusobacterium nucleatum subsp. nucleatum
Length = 164
Score = 85.8 bits (203), Expect = 1e-15
Identities = 48/140 (34%), Positives = 77/140 (55%)
Frame = +1
Query: 322 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 501
+++LKI V K T+ G+ F A+GD G IGLG+ + V AIR AI AK +++
Sbjct: 11 EKLLKISRVSKTTKGGRTISFSVLAAVGDGEGKIGLGLGKANGVPDAIRKAIAAAKKNIV 70
Query: 502 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCY 681
+ K +T+P ++ GK G+ T+ + PA GTG+++ +++L++ GV D
Sbjct: 71 KISL--------KNNTIPHEIAGKWGATTLWMAPAYEGTGVIAGSASREILELVGVHDIL 122
Query: 682 TSARGSTGTLGNFAKATYAA 741
T +GS N A+AT A
Sbjct: 123 TKIKGSRNK-HNVARATVEA 141
>UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 136
Score = 85.0 bits (201), Expect = 2e-15
Identities = 41/78 (52%), Positives = 55/78 (70%)
Frame = +1
Query: 196 PVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQR 375
PVTKLGRLV++GK+ ++ I+ F + IKE++I+D L L +EV+ I VQKQT G+
Sbjct: 36 PVTKLGRLVKDGKVKSIDQIFEFGIKIKEYQIVDHLLS-RLKEEVMTIDQVQKQTSRGKE 94
Query: 376 TRFKAFVAIGDNNGHIGL 429
R KA VAIGD+NGH L
Sbjct: 95 PRLKASVAIGDHNGHRAL 112
>UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiella
natans|Rep: Ribosomal protein rpS5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 219
Score = 82.2 bits (194), Expect = 1e-14
Identities = 48/145 (33%), Positives = 79/145 (54%)
Frame = +1
Query: 307 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 486
GP ++VL++ + K + G+ F+A VA+GD NG IGLG +KEV A+ A + A
Sbjct: 68 GPRFEEKVLQVRRITKVVKGGKNMGFRALVAVGDKNGKIGLGCASAKEVMVAVEKASMEA 127
Query: 487 KLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAG 666
K + + V I K +++P ++ + G+ +V + PA GTG+V+ + +L++AG
Sbjct: 128 KKTAITV-------PITKDYSLPHRLDVEWGAASVMMKPASVGTGLVAGGAVRTILELAG 180
Query: 667 VQDCYTSARGSTGTLGNFAKATYAA 741
Q+ G+ L N AKA A
Sbjct: 181 YQNARGKQLGTDNALNN-AKAVLEA 204
>UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Oceanobacillus
iheyensis
Length = 167
Score = 81.8 bits (193), Expect = 2e-14
Identities = 49/139 (35%), Positives = 78/139 (56%)
Frame = +1
Query: 316 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 495
L + V+ + V K + G+R RF A V +GD NGH+G G ++EV AI+ A+ AK +
Sbjct: 12 LEERVVTVNRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEVPEAIKKAVDDAKKN 71
Query: 496 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 675
++ V +G T+P ++ G+ GS V + PA GTG++S + +L++AGV D
Sbjct: 72 LISV------PIVGT--TIPHEIHGQFGSGNVLMKPAAEGTGVISGGPVRAILELAGVGD 123
Query: 676 CYTSARGSTGTLGNFAKAT 732
T + GS + N +AT
Sbjct: 124 ILTKSLGSNTPI-NMIRAT 141
>UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
penetrans
Length = 234
Score = 80.6 bits (190), Expect = 4e-14
Identities = 47/139 (33%), Positives = 77/139 (55%)
Frame = +1
Query: 316 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 495
L ++++ + + K T+ G+ RF A IGD G++G G+ S EV AIR A+ AK +
Sbjct: 78 LEEKIVGVKKISKTTKGGRNMRFSALAVIGDRKGNVGFGLGKSIEVPVAIRKALKSAKNN 137
Query: 496 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 675
+ V K+ K T+ +V GK G+ V + PAP+GTG+++ K +L++ G +D
Sbjct: 138 MYKV-------KMNKNFTLYHEVIGKHGAGKVLIKPAPKGTGVIAGGPIKVVLELCGFKD 190
Query: 676 CYTSARGSTGTLGNFAKAT 732
Y+ G +L N +AT
Sbjct: 191 VYSKNLGKNTSL-NMVRAT 208
>UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17;
Bacteria|Rep: 30S ribosomal protein S5 - Leptospira
interrogans
Length = 187
Score = 79.4 bits (187), Expect = 9e-14
Identities = 49/141 (34%), Positives = 76/141 (53%)
Frame = +1
Query: 319 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 498
+++V+KI V K + G+R F A +GD G +G+G + EV AIR +I AK +
Sbjct: 31 SEKVVKIDRVAKVVKGGRRFSFNALSVVGDQRGKVGIGFGKANEVPDAIRKSIESAKKHL 90
Query: 499 LPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDC 678
+ + K HT+P +V GK S V L P+ GTGI++ + +++ AG+QD
Sbjct: 91 VKINF--------KGHTIPHEVIGKFKSARVILKPSTAGTGIIAGASVRSIVEKAGIQDV 142
Query: 679 YTSARGSTGTLGNFAKATYAA 741
T + GS+ + N KAT A
Sbjct: 143 LTKSWGSSNPV-NIVKATLDA 162
>UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast
precursor; n=12; cellular organisms|Rep: 30S ribosomal
protein S5, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 303
Score = 78.2 bits (184), Expect = 2e-13
Identities = 45/140 (32%), Positives = 78/140 (55%)
Frame = +1
Query: 322 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 501
+ V+++ V K + G++ +F+A V +GD G++G+G +KEV A++ + I A+ +++
Sbjct: 149 ERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQGNVGVGCAKAKEVVAAVQKSAIDARRNIV 208
Query: 502 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCY 681
V + K T P + G G+ V L PA GTG+++ + +L+MAGV++
Sbjct: 209 QV-------PMTKYSTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENAL 261
Query: 682 TSARGSTGTLGNFAKATYAA 741
GS L N A+AT AA
Sbjct: 262 GKQLGSNNALNN-ARATLAA 280
>UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6;
Bacteria|Rep: 30S ribosomal protein S5 - Thermotoga
maritima
Length = 178
Score = 77.0 bits (181), Expect = 5e-13
Identities = 47/139 (33%), Positives = 78/139 (56%), Gaps = 2/139 (1%)
Frame = +1
Query: 322 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV- 498
+++++I K T+ G+ F+ +G+ NG +GLG+ ++EV AIR AI AK ++
Sbjct: 17 EKIIEIRRTSKVTKGGKNLSFRVVAIVGNKNGKVGLGIGKAREVPEAIRKAISAAKRNIV 76
Query: 499 -LPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 675
+PV G T+P +V G+ + V L PA GTGI++ + ++++AG+Q+
Sbjct: 77 EVPVING----------TIPHEVIGRQDASKVLLKPAAPGTGIIAGGTVRAVVELAGIQN 126
Query: 676 CYTSARGSTGTLGNFAKAT 732
T + GST L N A AT
Sbjct: 127 ILTKSLGSTNPL-NLALAT 144
>UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n=1;
Mus musculus|Rep: UPI000056598D UniRef100 entry - Mus
musculus
Length = 239
Score = 76.6 bits (180), Expect = 6e-13
Identities = 68/191 (35%), Positives = 88/191 (46%), Gaps = 7/191 (3%)
Frame = +1
Query: 190 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAG 369
W+ +T L L + KI E + LF P K I F G SL D+++ + + +
Sbjct: 34 WLQITTLYGLFKNMKIKSQEEVCLFCCPSKSLFTITDFPGESLKDDLMMASGLGSRLLSS 93
Query: 370 QRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL-SVLPVRRGYWGNKIGK-- 540
QRT+ GH GL CS EVATAI+ I + L S P+ R GN GK
Sbjct: 94 QRTK-----------GHSGLSSMCSGEVATAIQVLGITSYLGSPWPLCRE--GNMTGKSL 140
Query: 541 PHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKK----LLQMAGVQDCYTSARGSTGT 708
P P ++ S+ LI AP T I+S VPK LL +A D SA G T
Sbjct: 141 PSVCPMQIRDYHSSMLACLITAP-STCIISGLVPKNLLLLLLLLASTDDRCISASGCTDA 199
Query: 709 LGNFAKATYAA 741
LG AK T+ A
Sbjct: 200 LGRLAKTTFDA 210
>UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 170
Score = 74.9 bits (176), Expect = 2e-12
Identities = 42/84 (50%), Positives = 54/84 (64%)
Frame = +1
Query: 232 KIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 411
KI L+ +YLFS PIKEFE+ DF L L D+VLK+M V+KQ AG+ RFK V I
Sbjct: 2 KIKSLK-VYLFSRPIKEFEVTDFLLEVPLKDKVLKLMFVKKQPEAGRWIRFKVIVTIRYC 60
Query: 412 NGHIGLGVKCSKEVATAIRGAIIL 483
N ++ LGV+ KE+ A+ IIL
Sbjct: 61 NDNVSLGVERPKELLIAVCRTIIL 84
>UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1;
Chlamydomonas reinhardtii|Rep: Ribosomal protein S5
precursor - Chlamydomonas reinhardtii
Length = 673
Score = 73.3 bits (172), Expect = 6e-12
Identities = 44/149 (29%), Positives = 78/149 (52%)
Frame = +1
Query: 295 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 474
DF G + + ++++ V K + G+ F+ IG+ NG +G+G + +EVATA++ A
Sbjct: 506 DFDDGENWQERIIELSRVTKVVKGGKLMGFRCTAIIGNGNGLVGVGCQAGREVATAVKRA 565
Query: 475 IILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLL 654
++ AK SV+ V + T+P +V K + ++PA GTG+++ + +L
Sbjct: 566 LVDAKKSVVRV-------PLVGAGTIPHRVEAKFNAARCVMVPAADGTGVLAGSSIRSVL 618
Query: 655 QMAGVQDCYTSARGSTGTLGNFAKATYAA 741
++AGVQ+ G L N A+ AA
Sbjct: 619 ELAGVQNVLAKRIGCRSLLNN-ARCAVAA 646
>UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Mesoplasma
florum (Acholeplasma florum)
Length = 206
Score = 72.9 bits (171), Expect = 7e-12
Identities = 45/144 (31%), Positives = 74/144 (51%)
Frame = +1
Query: 301 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAII 480
F ++V+ I V K T+ G+ RF A V +GD G +GLG + EV AI+ A+
Sbjct: 38 FQKDDFEEKVVTIRRVTKVTKGGRHFRFAAVVVVGDKKGQVGLGTGKANEVPEAIKKAVK 97
Query: 481 LAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQM 660
AK +++ V + TVP +V G G+ V + PA GTG+++ + ++++
Sbjct: 98 EAKKNLIRVPL--------RGTTVPHEVIGHFGAGQVLIKPAKPGTGVIAGGPARAVIEL 149
Query: 661 AGVQDCYTSARGSTGTLGNFAKAT 732
AG+ D Y + G + N +AT
Sbjct: 150 AGIADVYAKSLGRNNPI-NMIRAT 172
>UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellular
organisms|Rep: 30S ribosomal protein S5 - Gloeobacter
violaceus
Length = 223
Score = 72.9 bits (171), Expect = 7e-12
Identities = 38/139 (27%), Positives = 76/139 (54%)
Frame = +1
Query: 322 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 501
+ V++I V K + G++ F+A + +GD NG +G+GV + +V A++ + A+ +++
Sbjct: 68 ERVVQIRRVTKVVKGGKKLSFRAVIVVGDGNGRVGVGVGKANDVIGAVKKGVSDARKALI 127
Query: 502 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCY 681
V + K +++P ++G G+ V L PA GTG+++ + +L++AG+++
Sbjct: 128 RV-------PLNKINSIPHPMSGSSGAANVFLKPASGGTGVIAGGAVRTVLELAGIKNVL 180
Query: 682 TSARGSTGTLGNFAKATYA 738
+ GS L N A A
Sbjct: 181 AKSLGSKSPLNNARAAADA 199
>UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2;
Deinococcus|Rep: 30S ribosomal protein S5 - Deinococcus
radiodurans
Length = 196
Score = 72.1 bits (169), Expect = 1e-11
Identities = 43/140 (30%), Positives = 76/140 (54%), Gaps = 2/140 (1%)
Frame = +1
Query: 322 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 501
+++L + K + G+R RF A V +GD NG +G+G+ +KEV AI A +A+ +++
Sbjct: 19 EKMLFVNRTSKTYQGGRRFRFAALVILGDRNGRVGMGIGKAKEVPVAIEKAKAVARKNMI 78
Query: 502 --PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 675
PV G T+P ++ G+ + V L PA GTG+++ VP+ + ++AG+ +
Sbjct: 79 TVPVENG----------TIPHEIVGENSTSRVLLKPAGPGTGVIAGTVPRSIAELAGITN 128
Query: 676 CYTSARGSTGTLGNFAKATY 735
+ GS + N A A +
Sbjct: 129 MLSKELGSRNKV-NVAYAVF 147
>UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5;
Bacteria|Rep: 30S ribosomal protein S5 - Aquifex
aeolicus
Length = 208
Score = 71.3 bits (167), Expect = 2e-11
Identities = 47/144 (32%), Positives = 70/144 (48%), Gaps = 2/144 (1%)
Frame = +1
Query: 316 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 495
L + ++ + T+ G+R F V +GD GH+G G +KEV AI I AK +
Sbjct: 28 LEERLIYANRTARVTKGGRRFSFSTLVVVGDRKGHVGFGHGKAKEVTLAIAKGIEKAKKN 87
Query: 496 VL--PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGV 669
V+ P+ G TVP V G G+ + ++PA RGTG+V+ K + ++AG
Sbjct: 88 VIRVPIVDG----------TVPHDVIGTFGATKIIVLPARRGTGVVAGGAAKPVFELAGY 137
Query: 670 QDCYTSARGSTGTLGNFAKATYAA 741
D T GST N +A + A
Sbjct: 138 TDVLTKIIGSTNP-DNVVRAVFDA 160
>UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;
n=2; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 208
Score = 70.9 bits (166), Expect = 3e-11
Identities = 40/81 (49%), Positives = 50/81 (61%)
Frame = -2
Query: 731 VALAKFPKVPVEPRAEV*QSCTPAI*RSFLGTGADTIPVPRGAGISRTVTEPHLPVTLQG 552
+ LAK PKV V+P A V QS P+ FLGT A+ +PVP GAG+ T TEP P+TL G
Sbjct: 8 IVLAKSPKVAVQPLAHVQQSSIPSSSSHFLGTEAEVMPVPMGAGMKSTRTEPQWPITLCG 67
Query: 551 TVCGFPILLPQ*PLRTGKTDN 489
+CG LLP P+ + DN
Sbjct: 68 -LCGACCLLP--PVASTHRDN 85
>UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 340
Score = 70.9 bits (166), Expect = 3e-11
Identities = 43/140 (30%), Positives = 74/140 (52%)
Frame = +1
Query: 322 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 501
+ V+++ V K + G++ F+A V +GD G +G+GV +KEV A++ + A+ +++
Sbjct: 186 ERVVQVRRVTKVVKGGKQLHFRAVVVVGDKQGQVGVGVGKAKEVIAAVQKSATNARRNII 245
Query: 502 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCY 681
V + K T P + G G+ V L PA GTG+++ + +L+MAGV++
Sbjct: 246 TV-------PMTKYLTFPHRADGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENAL 298
Query: 682 TSARGSTGTLGNFAKATYAA 741
S L N A+AT A
Sbjct: 299 GKQIRSKNALNN-ARATVVA 317
>UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Onion yellows
phytoplasma
Length = 171
Score = 70.1 bits (164), Expect = 5e-11
Identities = 45/131 (34%), Positives = 66/131 (50%), Gaps = 1/131 (0%)
Frame = +1
Query: 310 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 489
P L ++V+KI + K + G R RF A V +GD G IG +KE+ AI+ A+ AK
Sbjct: 13 PLLEEKVVKINRITKVVKGGARFRFSALVVVGDKKGQIGFATAKAKEIVEAIKKALEKAK 72
Query: 490 LSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS-APVPKKLLQMAG 666
+ VR G T+P G+ G+ L PA +GTGIV+ + +L++ G
Sbjct: 73 KQL--VRIPITGT------TIPHDTIGRFGASKFFLKPASKGTGIVAGGKAARTILELVG 124
Query: 667 VQDCYTSARGS 699
+ D T GS
Sbjct: 125 INDVLTKTFGS 135
>UniRef50_Q50301 Cluster: 30S ribosomal protein S5; n=2;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
pneumoniae
Length = 219
Score = 69.3 bits (162), Expect = 9e-11
Identities = 39/127 (30%), Positives = 67/127 (52%), Gaps = 2/127 (1%)
Frame = +1
Query: 322 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA--KLS 495
+ ++K+ + K T+ G+ RF V +G+ G IG G+ + EV AI+ AI A L
Sbjct: 68 ERIVKLKRISKTTKGGRNMRFSVLVVVGNRKGKIGYGIAKALEVPNAIKKAIKAAHNSLH 127
Query: 496 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 675
+ + +G ++ +V G+ G+ V L PAP+GTGI++ + ++++AG D
Sbjct: 128 TIEIHKG----------SIYHEVIGRSGASRVLLKPAPQGTGIIAGGAIRAIIELAGYSD 177
Query: 676 CYTSARG 696
YT G
Sbjct: 178 IYTKNLG 184
>UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n=3;
cellular organisms|Rep: Chloroplast 30S ribosomal
protein S5 - Thalassiosira pseudonana (Marine diatom)
Length = 179
Score = 68.5 bits (160), Expect = 2e-10
Identities = 39/139 (28%), Positives = 73/139 (52%)
Frame = +1
Query: 322 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 501
+ ++KI V K T+ G++ F+A V IGD NG +G+GV +++V A + A + +++
Sbjct: 28 ERLIKISRVTKVTKGGKKLSFRAVVVIGDENGKVGVGVGKAEDVVNAFKKAKTDGRKNLI 87
Query: 502 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCY 681
V I K ++P V G G+ + + P+ G+G+++ + +L++AG+++
Sbjct: 88 DV-------PITKSLSIPHAVIGDLGACKIIMRPSIEGSGVIAGGAVRTVLEVAGIKNVI 140
Query: 682 TSARGSTGTLGNFAKATYA 738
GS L N A A
Sbjct: 141 AKQLGSDNLLNNARTAIVA 159
>UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128;
Bacteria|Rep: 30S ribosomal protein S5 - Mycobacterium
bovis
Length = 220
Score = 66.5 bits (155), Expect = 6e-10
Identities = 48/140 (34%), Positives = 68/140 (48%)
Frame = +1
Query: 322 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 501
+ V+ I V K + G+R F A V +GD NG +G+G +KEV AI + A+ S
Sbjct: 44 ERVVAINRVSKVVKGGRRFSFTALVIVGDGNGMVGVGYGKAKEVPAAIAKGVEEARKSFF 103
Query: 502 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCY 681
V IG T P V G+ + V L PA GTG+++ + +L+ AGV D
Sbjct: 104 RV------PLIGGTITHP--VQGEAAAGVVLLRPASPGTGVIAGGAARAVLECAGVHDIL 155
Query: 682 TSARGSTGTLGNFAKATYAA 741
+ GS + N AT AA
Sbjct: 156 AKSLGSDNAI-NVVHATVAA 174
>UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep:
Ribosomal protein S5 - Victivallis vadensis ATCC BAA-548
Length = 181
Score = 66.1 bits (154), Expect = 9e-10
Identities = 43/141 (30%), Positives = 70/141 (49%)
Frame = +1
Query: 319 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 498
++ V+ I K + G+ F A V +GD G +G G + EV+ AIR A+ ++
Sbjct: 16 DESVISINRSAKVVKGGKNFSFGALVVVGDRKGRVGYGYGKANEVSDAIRKGGEAARRNL 75
Query: 499 LPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDC 678
+ V T+P +V K G V L PA GTG+++ + +L++AGV+D
Sbjct: 76 VTVPM--------HGQTLPHEVEVKFGGARVLLRPASAGTGLIAGGAVRAILELAGVEDV 127
Query: 679 YTSARGSTGTLGNFAKATYAA 741
+ G++ N AKAT+ A
Sbjct: 128 LAKSLGASNA-ANVAKATFKA 147
>UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40;
Bacteria|Rep: 30S ribosomal protein S5 - Bifidobacterium
longum
Length = 233
Score = 66.1 bits (154), Expect = 9e-10
Identities = 48/145 (33%), Positives = 69/145 (47%)
Frame = +1
Query: 307 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 486
G L D V+ I V K + G+ F A V +GD NG +G+G S+EV AI + A
Sbjct: 42 GDELLDRVVTINRVSKTHKGGRTFSFAALVVVGDGNGTVGVGYGKSREVPAAIAKGQLDA 101
Query: 487 KLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAG 666
K + V R T+ V G + TV L PA GTG+++ + +++ AG
Sbjct: 102 KKHMFSVPR--------VRGTITHPVQGHDAAGTVLLRPAAPGTGVIAGGSVRAVMECAG 153
Query: 667 VQDCYTSARGSTGTLGNFAKATYAA 741
+ D T + GS T N +AT A
Sbjct: 154 ITDVLTKSMGS-ATAVNVVRATVDA 177
>UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellular
organisms|Rep: 30S ribosomal protein S5 - Zymomonas
mobilis
Length = 233
Score = 63.7 bits (148), Expect = 5e-09
Identities = 45/147 (30%), Positives = 73/147 (49%), Gaps = 2/147 (1%)
Frame = +1
Query: 307 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 486
G L ++++ I V K + G+R F A V +GD G +G G ++EV AI A A
Sbjct: 56 GEELIEKLVHINRVSKTVKGGKRFGFAALVVVGDGKGRVGFGHGKAREVPEAISKATAAA 115
Query: 487 KLSVL--PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQM 660
K +++ P+R G + G+ G+ G+ V L AP GTGI++ + + +
Sbjct: 116 KKTMIRVPLREGRTLHHDGR---------GRFGAGLVYLRSAPSGTGIIAGGPMRAIFES 166
Query: 661 AGVQDCYTSARGSTGTLGNFAKATYAA 741
GV D T + G++ N +AT+ A
Sbjct: 167 LGVADVVTKSVGTSNPY-NMIRATFEA 192
>UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellular
organisms|Rep: 30S ribosomal protein S5 - Synechocystis
sp. (strain PCC 6803)
Length = 173
Score = 62.9 bits (146), Expect = 8e-09
Identities = 37/139 (26%), Positives = 68/139 (48%)
Frame = +1
Query: 322 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 501
+ V++I V K + G++ F+A V +G+ G +G+GV + +V A+R + K ++
Sbjct: 19 ERVIQIRRVSKVVKGGKKLSFRAIVVVGNETGQVGVGVGKAGDVIGAVRKGVADGKKQLI 78
Query: 502 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCY 681
V + K +++ G G V + PA GTG+++ + +L++AGV++
Sbjct: 79 EV-------PLTKSNSITHITNGVSGGAKVVVRPAAPGTGVIAGGAVRTVLELAGVKNIL 131
Query: 682 TSARGSTGTLGNFAKATYA 738
GS L N A A
Sbjct: 132 AKQLGSNNPLNNARAAINA 150
>UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9;
Firmicutes|Rep: 30S ribosomal protein S5 - Mycoplasma
mobile
Length = 243
Score = 62.5 bits (145), Expect = 1e-08
Identities = 43/140 (30%), Positives = 72/140 (51%)
Frame = +1
Query: 322 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 501
++++ I V + G+R F A V +GD G +G G + EV AI+ A+ A+ +++
Sbjct: 91 EKIVNIARVTNVVKGGRRFSFAAVVVVGDKKGRVGYGHGKALEVPDAIKKAVKDAQNNLI 150
Query: 502 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCY 681
V I TVP + K + V L PAP+G GI+++ + ++++AG D Y
Sbjct: 151 RV-------PIINKSTVPHEQWAKFLASKVMLKPAPKGKGIIASNSVRAVVELAGYTDIY 203
Query: 682 TSARGSTGTLGNFAKATYAA 741
T + GS + N KA + A
Sbjct: 204 TKSYGSR-SKENVVKAVFDA 222
>UniRef50_Q7MTN0 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 172
Score = 61.7 bits (143), Expect = 2e-08
Identities = 45/144 (31%), Positives = 68/144 (47%), Gaps = 2/144 (1%)
Frame = +1
Query: 316 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 495
L D ++ I V K T+ G+ F A V +G+ +G IG G+ + EV AI + AK +
Sbjct: 16 LKDRLVAINRVTKVTKGGRTFTFAAIVVVGNEDGVIGWGLGKAGEVPAAIAKGVEAAKKN 75
Query: 496 VL--PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGV 669
++ PV G T+P + G +V L PA GTG+ + + +L GV
Sbjct: 76 LIRVPVHNG----------TIPHEQAASYGGASVFLKPATTGTGVKAGGAMRAVLDSVGV 125
Query: 670 QDCYTSARGSTGTLGNFAKATYAA 741
D ++GS+ N KAT A
Sbjct: 126 TDVLAKSKGSSNP-HNLVKATIQA 148
>UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8;
Bacteria|Rep: 30S ribosomal protein S5 - Desulfotalea
psychrophila
Length = 171
Score = 61.7 bits (143), Expect = 2e-08
Identities = 44/139 (31%), Positives = 68/139 (48%)
Frame = +1
Query: 316 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 495
L ++++ I V K + G+R F A V +GD NG +G G+ + +V AIR + A+
Sbjct: 16 LIEKIVFINRVAKVVKGGRRFSFSAIVVVGDGNGKVGYGLGKANQVPEAIRKGVERARKD 75
Query: 496 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 675
+ V + PH +V G G+ V L PA GTG+++ + +L+ AGV +
Sbjct: 76 MALVSL----TDVSIPH----QVIGHYGAGRVFLRPASAGTGLIAGGPVRAVLEAAGVSN 127
Query: 676 CYTSARGSTGTLGNFAKAT 732
T GS N KAT
Sbjct: 128 ILTKCLGSHNP-HNMVKAT 145
>UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellular
organisms|Rep: 30S ribosomal protein S5 - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 189
Score = 60.9 bits (141), Expect = 3e-08
Identities = 46/142 (32%), Positives = 69/142 (48%), Gaps = 2/142 (1%)
Frame = +1
Query: 322 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK--LS 495
D+++ I V K + G+R F A V +GD G +G G ++EV AIR A AK L
Sbjct: 24 DKLVAINRVAKVVKGGRRFGFAALVVVGDQKGRVGFGHGKAREVPEAIRKATEAAKRDLI 83
Query: 496 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 675
+P+R G T+ V G+ G+ V L A GTGI++ + + + GV D
Sbjct: 84 FVPLRGG---------RTLHHDVHGRHGAGKVLLRSAKPGTGIIAGGPMRAVFETLGVHD 134
Query: 676 CYTSARGSTGTLGNFAKATYAA 741
+ GS+ N +AT+ A
Sbjct: 135 VVAKSTGSSNPY-NMVRATFDA 155
>UniRef50_Q7UN03 Cluster: 30S ribosomal protein S5; n=3;
Bacteria|Rep: 30S ribosomal protein S5 - Rhodopirellula
baltica
Length = 177
Score = 60.1 bits (139), Expect = 6e-08
Identities = 43/148 (29%), Positives = 71/148 (47%), Gaps = 2/148 (1%)
Frame = +1
Query: 304 LGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL 483
L L D V+KI + G+R F A V +G+ +G +G G + EV +++ A
Sbjct: 17 LEAGLLDRVVKIKRCAAVVKGGRRFSFAAMVVVGNGSGQVGWGYGKANEVPPSVQKAQKQ 76
Query: 484 AKLSVL--PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQ 657
A S++ P+ G ++P +V G+ G+ V LIPA GTGI++ + + +
Sbjct: 77 ASRSMIHVPLVEG----------SIPHQVWGRYGAARVVLIPAGAGTGIIAGQAVRAVCE 126
Query: 658 MAGVQDCYTSARGSTGTLGNFAKATYAA 741
G+ D T + G+ + KAT A
Sbjct: 127 ACGIHDILTKSYGTNNPV-TLVKATLDA 153
>UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 181
Score = 58.4 bits (135), Expect = 2e-07
Identities = 26/36 (72%), Positives = 30/36 (83%)
Frame = +1
Query: 172 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIK 279
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIK
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIK 89
>UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein S5 - Opitutaceae
bacterium TAV2
Length = 231
Score = 58.0 bits (134), Expect = 2e-07
Identities = 39/128 (30%), Positives = 63/128 (49%)
Frame = +1
Query: 316 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 495
L ++V+ I K + G+R F A +GD NG +G+G + EV AI+ A+
Sbjct: 71 LVEKVVFINRCAKVVKGGRRFSFSALAVVGDKNGKVGIGYGKANEVPDAIKKGTENARKR 130
Query: 496 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 675
++ V K T+P +V G V L PA GTG+++ + +L+ AGV++
Sbjct: 131 MVSVTL--------KGDTIPHEVFGTHDGGKVLLRPAVTGTGLIAGGAVRAVLEAAGVKN 182
Query: 676 CYTSARGS 699
T + GS
Sbjct: 183 VLTKSMGS 190
>UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7;
Chlamydiaceae|Rep: 30S ribosomal protein S5 -
Chlamydophila abortus
Length = 165
Score = 58.0 bits (134), Expect = 2e-07
Identities = 42/142 (29%), Positives = 69/142 (48%)
Frame = +1
Query: 316 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 495
L ++VL + K + G++ F A + +GD G +G G + E+ AIR A+ +
Sbjct: 13 LEEKVLVVNRCSKVVKGGRKFSFSALILVGDGKGRLGYGFAKANELTDAIRKGGEAARKN 72
Query: 496 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 675
++ + G+ I PH V G + L PA GTGIV+ + +L+MAGV++
Sbjct: 73 LITI-ESLEGDSI--PHEVLVDQDG----AQLLLKPAKPGTGIVAGSRIRLILEMAGVKN 125
Query: 676 CYTSARGSTGTLGNFAKATYAA 741
+ GS + N KA + A
Sbjct: 126 IVAKSLGSNNPM-NQVKAAFKA 146
>UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 88
Score = 56.4 bits (130), Expect = 7e-07
Identities = 22/38 (57%), Positives = 30/38 (78%)
Frame = +1
Query: 190 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFF 303
W PVTKLGRLV++GK+ ++ I+ F + IKEFEI+D F
Sbjct: 35 WTPVTKLGRLVKDGKVKSIDQIFEFGIKIKEFEIVDHF 72
>UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11;
Bacteria|Rep: 30S ribosomal protein S5 - Nitrosomonas
europaea
Length = 177
Score = 56.0 bits (129), Expect = 9e-07
Identities = 39/139 (28%), Positives = 68/139 (48%)
Frame = +1
Query: 316 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 495
L ++++ + V K + G+ F A +GD G +G+G S+EV A++ A+ A+
Sbjct: 21 LKEKMVSVNRVTKVVKGGRILGFAALTVVGDGKGSVGMGKGKSREVPLAVQKAMDEARQR 80
Query: 496 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 675
++ V N I T+ V G+ G+ V + PA GTGI++ + + ++ GV +
Sbjct: 81 MVRV------NLIN--GTLHHSVIGRHGAARVYMQPASEGTGIIAGGPMRAIFEVMGVHN 132
Query: 676 CYTSARGSTGTLGNFAKAT 732
GST N +AT
Sbjct: 133 ILAKCLGSTNPY-NIVRAT 150
>UniRef50_Q4FLN5 Cluster: 30S ribosomal protein S5; n=4;
Rickettsiales|Rep: 30S ribosomal protein S5 -
Pelagibacter ubique
Length = 170
Score = 55.2 bits (127), Expect = 2e-06
Identities = 41/142 (28%), Positives = 71/142 (50%), Gaps = 2/142 (1%)
Frame = +1
Query: 322 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK--LS 495
++++ I + K + G+R F A V +G+ G IG+ +K+V AI+ A A+ L
Sbjct: 13 EKLVHINRITKVVKGGRRFGFSALVVVGNQAGKIGVAHAKAKQVPDAIKKANETARRVLI 72
Query: 496 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 675
+P+R G T+ V GK G+ + L AP+GTGI++ + + ++ G++D
Sbjct: 73 HVPLREG---------RTIHHDVYGKDGAGKIILRSAPKGTGIIAGGPVRAVCEVLGIKD 123
Query: 676 CYTSARGSTGTLGNFAKATYAA 741
+ G T N +AT A
Sbjct: 124 IVAKSMG-TSNPHNMIRATMKA 144
>UniRef50_Q2GEC2 Cluster: 30S ribosomal protein S5; n=1;
Neorickettsia sennetsu str. Miyayama|Rep: 30S ribosomal
protein S5 - Neorickettsia sennetsu (strain Miyayama)
Length = 172
Score = 55.2 bits (127), Expect = 2e-06
Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 2/131 (1%)
Frame = +1
Query: 316 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 495
L + V+ I V K T+ G++ F+ +GD G +G EV A A+ AK +
Sbjct: 11 LFESVVDIARVSKVTKGGRQFSFRVAALVGDKKGCVGYATAKHDEVLDARSKAVRKAKGA 70
Query: 496 VL--PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGV 669
++ P+R G T+ K G+ + + PAP GTGIV+ +K +M GV
Sbjct: 71 MIRFPLREG---------RTIHHDCFSKLGASKLFIKPAPEGTGIVAGGAMRKFCEMLGV 121
Query: 670 QDCYTSARGST 702
D + GS+
Sbjct: 122 SDIIAKSYGSS 132
>UniRef50_A4S3U8 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 148
Score = 54.4 bits (125), Expect = 3e-06
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 1/139 (0%)
Frame = +1
Query: 328 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPV 507
V+ + K T+ G T F A V +G+ +G IG +V AI A A S+ V
Sbjct: 4 VIDVNRTTKVTKGGDLTNFTAMVVVGNGDGVIGFATGKGADVGMAIDKAYRKAARSLTYV 63
Query: 508 RRGYWGNKIGKPHTVPCKVTGK-CGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYT 684
+R + HT+ +V GK C ++ V ++PAP G GIV+ + + +AG+++
Sbjct: 64 QRF-------EDHTIYHEVRGKYCKTICV-MLPAPSGDGIVANDTVEAICTLAGIKNIKA 115
Query: 685 SARGSTGTLGNFAKATYAA 741
GS N +A +AA
Sbjct: 116 KIHGSHHP-HNTVRAVFAA 133
>UniRef50_A0CLK5 Cluster: Chromosome undetermined scaffold_20, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_20,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 337
Score = 53.2 bits (122), Expect = 6e-06
Identities = 29/104 (27%), Positives = 47/104 (45%)
Frame = +1
Query: 382 FKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCK 561
F+ + IG+ NG IG G K+ TA+R A + A+ +++P+ W HT P
Sbjct: 187 FRQLIFIGNGNGVIGYGKGKGKDFETALRRAKVDAQRNLVPISLDLW-------HTCPIP 239
Query: 562 VTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSAR 693
+TG+ + + P P G P +L + G+ C R
Sbjct: 240 LTGRFNDAEIEINPRPLGFNAYGNPQIASMLMLTGIHHCSFKVR 283
>UniRef50_A3BJ14 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 163
Score = 51.2 bits (117), Expect = 3e-05
Identities = 21/38 (55%), Positives = 30/38 (78%)
Frame = +1
Query: 613 GTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAK 726
G+ +V+ VPKK+L+ AG++D +TS+RGST TL NF K
Sbjct: 2 GSSVVATRVPKKVLKFAGIEDVFTSSRGSTKTLSNFVK 39
>UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;
Saccharomyces cerevisiae|Rep: Uncharacterized protein
YGL123C-A - Saccharomyces cerevisiae (Baker's yeast)
Length = 76
Score = 50.8 bits (116), Expect = 3e-05
Identities = 30/54 (55%), Positives = 35/54 (64%)
Frame = -2
Query: 338 IFRTSSFRDGPRKKSMISNSLIGKENK*MLSSLSIFPSRTRRPSLVTGTHSFWS 177
+F TSS + G K SMI NSL GKE K + S + I P+ T PSLVTGTH F S
Sbjct: 1 MFMTSSCKPG-NKVSMIWNSLTGKECKKISSMVVILPALTNLPSLVTGTHPFSS 53
>UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondrial
ribosome structure: Pubmed 11279123. precursor; n=9;
Eurotiomycetidae|Rep: Remark: literature about the
mitochondrial ribosome structure: Pubmed 11279123.
precursor - Aspergillus niger
Length = 444
Score = 50.0 bits (114), Expect = 6e-05
Identities = 42/143 (29%), Positives = 65/143 (45%)
Frame = +1
Query: 313 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 492
SL + L I V QTR G+ G+ NG +G+G+ S E+ A + A A
Sbjct: 254 SLYIKDLVIRRVSNQTRLGKVPSMSVVTVAGNQNGLMGIGIAKSDEIIDACQQARARAVK 313
Query: 493 SVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQ 672
++ PV R Y + T+ V GK G+V ++L+ P G G+ + ++ + AG+
Sbjct: 314 NMQPVPR-Y------EKRTIFGDVEGKVGAVQLKLMHRPPGFGLRCQHLIFEMCRAAGIH 366
Query: 673 DCYTSARGSTGTLGNFAKATYAA 741
D S + N KA Y A
Sbjct: 367 DIAARVNRSRNPM-NTVKAAYEA 388
>UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis
group|Rep: 30S ribosomal protein S5 - Ehrlichia
ruminantium (strain Gardel)
Length = 174
Score = 49.2 bits (112), Expect = 1e-04
Identities = 34/125 (27%), Positives = 59/125 (47%)
Frame = +1
Query: 328 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPV 507
++ + V K + G+R F V IGD G +G G+ EV+ A A+ A+ +++ V
Sbjct: 20 IVSVRRVAKVVKGGRRFSFSVLVVIGDEKGKVGCGIGKHLEVSEAKVKAVNAARKNMIRV 79
Query: 508 RRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTS 687
+ + T+ + K S V L A GTGI++ + + ++ GVQD
Sbjct: 80 H-------LRESRTLHHDIQAKFCSSKVMLRSAKVGTGIIAGGSIRLIFEVLGVQDVVAK 132
Query: 688 ARGST 702
+ GS+
Sbjct: 133 SIGSS 137
>UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1;
Neurospora crassa|Rep: Related to ribosomal protein S5 -
Neurospora crassa
Length = 477
Score = 48.8 bits (111), Expect = 1e-04
Identities = 40/132 (30%), Positives = 63/132 (47%)
Frame = +1
Query: 346 VQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWG 525
V QTR G+ V G+ +G +GLG+ S E + A+ A +LA ++ P+ R +
Sbjct: 323 VVNQTRLGKIASDSVMVIAGNGDGWLGLGMAKSVEASIAVEKATLLAIQNMQPIPR--YE 380
Query: 526 NKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTG 705
N+ T+ +VT K VRL P G G+ + ++ + AG++D S
Sbjct: 381 NR-----TIYGEVTTKVSGTIVRLNSRPPGFGLRVSHRIFEMCRAAGIRDLSAKFLRSRN 435
Query: 706 TLGNFAKATYAA 741
+ N KATY A
Sbjct: 436 PM-NTVKATYQA 446
>UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG00649.1 - Gibberella zeae PH-1
Length = 504
Score = 48.4 bits (110), Expect = 2e-04
Identities = 44/133 (33%), Positives = 62/133 (46%), Gaps = 1/133 (0%)
Frame = +1
Query: 346 VQKQTRAGQRTRFKAFVAI-GDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYW 522
V QTR G + R + VAI G+ NG +GLG+ S E A A +LA ++ PVRR +
Sbjct: 350 VSNQTRLG-KVRSTSVVAIAGNGNGRLGLGMAKSTEPGVAEETAQMLAIRNMKPVRR--Y 406
Query: 523 GNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 702
N+ T+ VT K V L+ P G G+ ++ + AG+ D S
Sbjct: 407 ENR-----TIYGNVTSKISGTVVELMARPPGFGLRCPHRIFEMCRAAGIHDISARMPRSK 461
Query: 703 GTLGNFAKATYAA 741
+ N KA Y A
Sbjct: 462 NPM-NSVKAAYQA 473
>UniRef50_Q6CAL1 Cluster: Similar to sp|P33759 Saccharomyces
cerevisiae YBR251w MRPS5 ribosomal protein S5; n=1;
Yarrowia lipolytica|Rep: Similar to sp|P33759
Saccharomyces cerevisiae YBR251w MRPS5 ribosomal protein
S5 - Yarrowia lipolytica (Candida lipolytica)
Length = 312
Score = 47.6 bits (108), Expect = 3e-04
Identities = 43/142 (30%), Positives = 66/142 (46%), Gaps = 1/142 (0%)
Frame = +1
Query: 319 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGV-KCSKEVATAIRGAIILAKLS 495
N +L V+ QT G++ +F VA GD G +GLG K A+ A+ A S
Sbjct: 148 NTRLLLNRIVKSQTGKGKKMQFCVLVATGDGKGMLGLGEGKDPLSFPVALEKAMWKATRS 207
Query: 496 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 675
+ V R + N+ T+ +V K +V + + AP G G+ P+ ++ M G+ D
Sbjct: 208 MKMVPR--YQNR-----TIYGEVYKKFHAVHLTMRSAPAGHGLRVNPIVSQMCSMVGITD 260
Query: 676 CYTSARGSTGTLGNFAKATYAA 741
+ GS L N AKA + A
Sbjct: 261 MTCNVYGSRNPL-NVAKAAFEA 281
>UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 407
Score = 46.4 bits (105), Expect = 7e-04
Identities = 40/143 (27%), Positives = 66/143 (46%)
Frame = +1
Query: 313 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 492
+L+ + L V QTR G+ + +G+ NG +G+G S E + A A +LA
Sbjct: 242 NLHSKQLVQRRVANQTRLGKVQKASIMYVVGNGNGWLGIGEAKSTEPSIAGLKARLLAIR 301
Query: 493 SVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQ 672
++ P+RR Y + T+ VT K V++ P G G+ + ++ + AG+Q
Sbjct: 302 NMRPIRR-Y------EDRTIYGSVTAKVSGTVVKMNARPPGFGLRVSHRIFEMCRAAGIQ 354
Query: 673 DCYTSARGSTGTLGNFAKATYAA 741
D + S + N KA Y A
Sbjct: 355 DLAANIPRSRNPM-NTVKAAYWA 376
>UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 414
Score = 45.6 bits (103), Expect = 0.001
Identities = 39/142 (27%), Positives = 65/142 (45%)
Frame = +1
Query: 316 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 495
L ++L V QTR G+ + +G+ NG IGLG S + A+ A ++A +
Sbjct: 250 LRHKILVQRFVTNQTRLGKVQSWHIMTIVGNGNGRIGLGEAKSVDGQIAMHKARLMAIKN 309
Query: 496 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 675
++P+RR Y + T+ KV K V + P G G+ + ++ ++AG++D
Sbjct: 310 MVPIRR-Y------EDRTIYGKVKVKIAGTVVEMAARPPGFGLRISHRLFEICRLAGIKD 362
Query: 676 CYTSARGSTGTLGNFAKATYAA 741
S S + N KA A
Sbjct: 363 LSASIPRSRNPM-NTVKAAMKA 383
>UniRef50_Q4PBG0 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 375
Score = 41.9 bits (94), Expect = 0.016
Identities = 38/141 (26%), Positives = 59/141 (41%), Gaps = 2/141 (1%)
Frame = +1
Query: 313 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA-- 486
+L+ + + V T G+ A V G+ G +G G + A R A A
Sbjct: 189 NLHRHAIVLKRVVHMTTKGKDASMYALVIAGNGKGLVGYGEGKDTNASKAGRKAFNAAVK 248
Query: 487 KLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAG 666
L + + +G G++ TV ++ K G+ V L P P G G+ PV + + G
Sbjct: 249 NLDSVAIHKGSDGSR-----TVETQLEAKWGASRVVLRPRPAGFGLRVPPVIHAICRSVG 303
Query: 667 VQDCYTSARGSTGTLGNFAKA 729
+ D S GST + N KA
Sbjct: 304 ITDLSASIYGSTNPV-NVVKA 323
>UniRef50_A6S1U3 Cluster: Putative uncharacterized protein; n=2;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Botryotinia fuckeliana B05.10
Length = 411
Score = 41.9 bits (94), Expect = 0.016
Identities = 38/142 (26%), Positives = 59/142 (41%)
Frame = +1
Query: 316 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 495
L+ ++L V QTR G+ G+ G +G+G +E A I A +
Sbjct: 248 LDTKILVSHRVVNQTRLGKIDSMYVLAIAGNGRGRLGIGEAKGQEPEDTNNNAKIAAIKN 307
Query: 496 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 675
+ PV R Y + T+ V GK +V V+L+ P G G+ + + + G+ D
Sbjct: 308 MQPVPR-Y------EERTIYGDVEGKVSAVEVKLMARPPGFGLRCQKLIFDMAKAVGIHD 360
Query: 676 CYTSARGSTGTLGNFAKATYAA 741
S + N KATY A
Sbjct: 361 LSAKVPRSRNKM-NTVKATYQA 381
>UniRef50_UPI0000DA3DCA Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Rattus norvegicus
Length = 68
Score = 41.1 bits (92), Expect = 0.028
Identities = 20/42 (47%), Positives = 28/42 (66%)
Frame = +1
Query: 610 RGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAKATY 735
RG + + + KKLL +A +QDCY AR + LGN+AKAT+
Sbjct: 6 RGRAVFTTVLKKKLL-LASIQDCYMIARVHSLMLGNYAKATF 46
>UniRef50_UPI00015B5E49 Cluster: PREDICTED: similar to 28S ribosomal
protein S5; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to 28S ribosomal protein S5 - Nasonia
vitripennis
Length = 405
Score = 39.1 bits (87), Expect = 0.11
Identities = 30/111 (27%), Positives = 50/111 (45%)
Frame = +1
Query: 367 GQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPH 546
G++ + +FV G+ NG G+ + S E TA+R A A ++ V + K H
Sbjct: 162 GRKRSYSSFVITGNKNGLCGIALGKSAEGRTALRLARNRAGFKLMHV-------PLYKNH 214
Query: 547 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 699
TV + GS + + P G G+V K ++ G++D + GS
Sbjct: 215 TVFHDFFTQFGSTKLFVTKKPEGYGLVCHRAIKCACEVIGIKDLHVKVEGS 265
>UniRef50_Q7R438 Cluster: GLP_254_52826_53383; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_254_52826_53383 - Giardia lamblia
ATCC 50803
Length = 185
Score = 39.1 bits (87), Expect = 0.11
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = -1
Query: 417 TVVVANGNKCLETCALSGTCLFLYRHDL*NLIIQ-GRAEEEINDLEFFDW*RKQVNALEF 241
+V V + + E L G L L RHD+ +L+ + +E +NDL D R N ++
Sbjct: 44 SVTVPDYHMSTEPRTLPGCGLLLDRHDIAHLLRKLALRKEVVNDLCLLDGERILENVIKG 103
Query: 240 VDFSFANKTAEFGDRNPLFLVFL 172
+ S ++ AEF R PLFL+ L
Sbjct: 104 LYLSCLHQAAEFRGRMPLFLLHL 126
>UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1;
Listeria monocytogenes str. 4b H7858|Rep: Putative
uncharacterized protein - Listeria monocytogenes str. 4b
H7858
Length = 77
Score = 37.1 bits (82), Expect = 0.45
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = -1
Query: 477 NSASNGSGDFLAALHTQTNMTVVVANGNKCLET 379
NS ++ +FL T+TNMT+ V+N NKC ET
Sbjct: 25 NSFTDSIWNFLRFTSTETNMTIFVSNNNKCCET 57
>UniRef50_Q7PLU5 Cluster: CG40049-PB, isoform B; n=3; Drosophila
melanogaster|Rep: CG40049-PB, isoform B - Drosophila
melanogaster (Fruit fly)
Length = 916
Score = 35.9 bits (79), Expect = 1.0
Identities = 28/123 (22%), Positives = 51/123 (41%)
Frame = +1
Query: 367 GQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPH 546
G++ R+ G+ NG G + EV TA+R + A ++ + + +
Sbjct: 189 GRKRRYSVLSVTGNGNGLAGFATAKAPEVRTALRKSKNRAGQKLINI-------SLCENR 241
Query: 547 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAK 726
T+ G + P G G+V + + ++ G++D Y GST + N AK
Sbjct: 242 TIFHDFRTDFGKTKIFCFQKPDGYGLVCHRAIQTICKVIGIKDLYAKIEGST-NIQNIAK 300
Query: 727 ATY 735
A +
Sbjct: 301 AFF 303
Score = 35.9 bits (79), Expect = 1.0
Identities = 28/123 (22%), Positives = 51/123 (41%)
Frame = +1
Query: 367 GQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPH 546
G++ R+ G+ NG G + EV TA+R + A ++ + + +
Sbjct: 466 GRKRRYSVLSVTGNGNGLAGFATAKAPEVRTALRKSKNRAGQKLINI-------SLCENR 518
Query: 547 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAK 726
T+ G + P G G+V + + ++ G++D Y GST + N AK
Sbjct: 519 TIFHDFRTDFGKTKIFCFQKPDGYGLVCHRAIQTICKVIGIKDLYAKIEGST-NIQNIAK 577
Query: 727 ATY 735
A +
Sbjct: 578 AFF 580
Score = 35.9 bits (79), Expect = 1.0
Identities = 28/123 (22%), Positives = 51/123 (41%)
Frame = +1
Query: 367 GQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPH 546
G++ R+ G+ NG G + EV TA+R + A ++ + + +
Sbjct: 743 GRKRRYSVLSVTGNGNGLAGFATAKAPEVRTALRKSKNRAGQKLINI-------SLCENR 795
Query: 547 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFAK 726
T+ G + P G G+V + + ++ G++D Y GST + N AK
Sbjct: 796 TIFHDFRTDFGKTKIFCFQKPDGYGLVCHRAIQTICKVIGIKDLYAKIEGST-NIQNIAK 854
Query: 727 ATY 735
A +
Sbjct: 855 AFF 857
>UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial
precursor; n=6; Saccharomycetales|Rep: 37S ribosomal
protein S5, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 307
Score = 35.9 bits (79), Expect = 1.0
Identities = 40/148 (27%), Positives = 66/148 (44%), Gaps = 1/148 (0%)
Frame = +1
Query: 301 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGV-KCSKEVATAIRGAI 477
++ L + L + V QT G+ F A V +GD NG +GLG K +E++ AI A
Sbjct: 139 YITRKLTMKPLVMKRVSNQTGKGKIASFYALVVVGDKNGMVGLGEGKSREEMSKAIFKAH 198
Query: 478 ILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQ 657
A ++ + R + N+ T+ + + V + L A G G+ V ++ +
Sbjct: 199 WDAVRNLKEIPR--YENR-----TIYGDIDFRYHGVKLHLRSAKPGFGLRVNHVIFEICE 251
Query: 658 MAGVQDCYTSARGSTGTLGNFAKATYAA 741
AG++D S + N AK T A
Sbjct: 252 CAGIKDLSGKVYKSRNDM-NIAKGTIEA 278
>UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium
falciparum|Rep: Rps5 protein - Plasmodium falciparum
Length = 239
Score = 34.7 bits (76), Expect = 2.4
Identities = 21/66 (31%), Positives = 37/66 (56%)
Frame = +1
Query: 304 LGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL 483
L ++ +++++I + + G+ R+K + +G+ G IGLGV SK + I AII
Sbjct: 94 LNNNIIEKIIEIKKISYTIKKGRIRRYKIVLVLGNKQGWIGLGV--SKNI--NINKAIIS 149
Query: 484 AKLSVL 501
AK+ L
Sbjct: 150 AKIKAL 155
>UniRef50_UPI0000F2DE4B Cluster: PREDICTED: similar to thioredoxin
domain containing 3 (spermatozoa),; n=1; Monodelphis
domestica|Rep: PREDICTED: similar to thioredoxin domain
containing 3 (spermatozoa), - Monodelphis domestica
Length = 559
Score = 33.5 bits (73), Expect = 5.6
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Frame = +1
Query: 238 DKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQ--RTRFKAFVAIGDN 411
DK E ++LFSL K ++ P LN +VL+++ +++ AG+ R + + I
Sbjct: 81 DKCEPVFLFSLNGKIVSMVKGANAPLLNSKVLQLIEDERKVLAGEIPRRSDEYNILIIKP 140
Query: 412 NGHIGLGVKCSKEVATAIRGAIILAKLSVL 501
NG V K++ T GA I+A++ +L
Sbjct: 141 NGVEEEKVDTIKQLITGF-GAEIVAEMQLL 169
>UniRef50_Q2JDT3 Cluster: Exodeoxyribonuclease III; n=30;
Bacteria|Rep: Exodeoxyribonuclease III - Frankia sp.
(strain CcI3)
Length = 304
Score = 33.5 bits (73), Expect = 5.6
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Frame = +1
Query: 469 GAIILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKK 648
G IL++ ++ V RG G+ G P P + CG + + + P G I K
Sbjct: 74 GVAILSRDTLDDVARGLPGDP-GFPGPEPRAIAATCGGIRIWSLYVPNGRTIDDPHYAYK 132
Query: 649 LLQMAGVQDCYTSA--RGSTGTLGNF 720
L +A +++ A +G+ TLG+F
Sbjct: 133 LAWLAALREVVAEATTQGAVMTLGDF 158
>UniRef50_Q9RS86 Cluster: Ribosomal protein S2-related protein; n=5;
Bacteria|Rep: Ribosomal protein S2-related protein -
Deinococcus radiodurans
Length = 472
Score = 33.1 bits (72), Expect = 7.4
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +1
Query: 385 KAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIG 537
++ V IG + H G + +++VA A+RG + L V GYW + G
Sbjct: 2 RSLVLIGHGSHHHGESARATQQVAEALRGRGLAGHLPYDEVLEGYWQQEPG 52
>UniRef50_A4MJQ3 Cluster: Heat shock protein DnaJ domain protein;
n=1; Geobacter bemidjiensis Bem|Rep: Heat shock protein
DnaJ domain protein - Geobacter bemidjiensis Bem
Length = 441
Score = 33.1 bits (72), Expect = 7.4
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Frame = -1
Query: 657 LKKLLRNWRRHNSSTTRGRNQPDCYRTTLAGDLARDGVWLSDL---VTPVTSSNW*NRQL 487
L+++LR+WRRH+ N + ++A + + DL V + SS +L
Sbjct: 161 LREILRSWRRHHPERQPESNDTKAELARVKREIAVEAQAVHDLSAQVEQLRSSYVCRFKL 220
Query: 486 SKDNSASNGSGDFLAALHTQTNMTVVVA 403
DNS + GS D A + +M VV A
Sbjct: 221 RVDNSLAEGS-DLFAEMIAAADMNVVRA 247
>UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 270
Score = 33.1 bits (72), Expect = 7.4
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +1
Query: 328 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 474
V+++ V T G++ +A V +G+ NG G GV + +AIR A
Sbjct: 156 VVELRRVSNVTSGGKKRSLRALVVVGNRNGAAGFGVGKGRTPISAIRKA 204
>UniRef50_Q29F16 Cluster: GA16916-PA; n=1; Drosophila
pseudoobscura|Rep: GA16916-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 391
Score = 32.7 bits (71), Expect = 9.7
Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 6/59 (10%)
Frame = -3
Query: 199 QEPTLSGLPCRAHDHGRDHDRVHE-DRRGLYLHRV-----IRIRRENRHVHRLEQRPPL 41
+EPT S CR+ GR H R G HR+ IR R HRL + PP+
Sbjct: 146 REPTRSPSRCRSRQSGRSHQHPQRRSRSGTRQHRLSREPPIRHSRSISRQHRLSREPPV 204
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 760,890,701
Number of Sequences: 1657284
Number of extensions: 16350276
Number of successful extensions: 48466
Number of sequences better than 10.0: 100
Number of HSP's better than 10.0 without gapping: 45510
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48240
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60500186565
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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