Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc8a18
         (794 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IEA1 Cluster: Putative uncharacterized protein MAL13P...    37   0.67 
UniRef50_Q8NDA5 Cluster: Putative uncharacterized protein DKFZp4...    34   4.7  
UniRef50_Q11XS2 Cluster: ABC transporter, ATP-binding protein/pe...    33   8.3  
UniRef50_Q05FW0 Cluster: Putative uncharacterized protein; n=2; ...    33   8.3  

>UniRef50_Q8IEA1 Cluster: Putative uncharacterized protein
            MAL13P1.116; n=1; Plasmodium falciparum 3D7|Rep: Putative
            uncharacterized protein MAL13P1.116 - Plasmodium
            falciparum (isolate 3D7)
          Length = 3347

 Score = 36.7 bits (81), Expect = 0.67
 Identities = 17/41 (41%), Positives = 26/41 (63%)
 Frame = -3

Query: 420  TKTVTREFYILDMYVYNKNPTFISVIWYL*HKFFTNLSRDQ 298
            TKTV+    +LD+Y+YNKN  FI  + Y    +F N+ R++
Sbjct: 2493 TKTVSNLVCLLDLYMYNKNEVFIESLLY---NWFLNIKRNE 2530


>UniRef50_Q8NDA5 Cluster: Putative uncharacterized protein
           DKFZp434O1614; n=1; Homo sapiens|Rep: Putative
           uncharacterized protein DKFZp434O1614 - Homo sapiens
           (Human)
          Length = 127

 Score = 33.9 bits (74), Expect = 4.7
 Identities = 19/45 (42%), Positives = 25/45 (55%)
 Frame = +2

Query: 533 SPPLNLFIYFLDTIFNFYFFMIQHTKIHTILNFHPSTINPYF*FA 667
           +P L+   YFLDT F F FF+I HT  +  L  + +   P F FA
Sbjct: 50  TPTLSGHNYFLDTRFRFNFFLIVHTAFY--LESNLNVAQPLFPFA 92


>UniRef50_Q11XS2 Cluster: ABC transporter, ATP-binding
           protein/permease; n=1; Cytophaga hutchinsonii ATCC
           33406|Rep: ABC transporter, ATP-binding protein/permease
           - Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB
           9469)
          Length = 612

 Score = 33.1 bits (72), Expect = 8.3
 Identities = 19/41 (46%), Positives = 24/41 (58%)
 Frame = +3

Query: 558 IF*TQFLISIFL*YNIQKYIQSLIFTLLRSTLIFNLLIKXF 680
           IF   FLIS     NI KY   LI T LR+T+I+N+  + F
Sbjct: 90  IFIALFLISTNFLTNIFKYFSQLINTRLRATVIYNMRERMF 130


>UniRef50_Q05FW0 Cluster: Putative uncharacterized protein; n=2;
           Bacteria|Rep: Putative uncharacterized protein -
           Carsonella ruddii (strain PV)
          Length = 364

 Score = 33.1 bits (72), Expect = 8.3
 Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
 Frame = +2

Query: 365 FLLYTYISNI*NSRVTVFVAILLRNGLTDFDEIFCAYPVSMRIGQHLFFIPLNVRGSP-P 541
           F +Y Y +N+ NS + +  +        +F  +FC Y  +M  G + F   +NV   P  
Sbjct: 13  FNIYFY-NNVINSNLVLKFSNKHTKNFINFKIMFCHYIGNMT-GSYFFSKRVNVNLVPIS 70

Query: 542 LNLFIYFLDTIF 577
           L LF++FL+T+F
Sbjct: 71  LYLFLFFLNTVF 82


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 642,572,685
Number of Sequences: 1657284
Number of extensions: 11974561
Number of successful extensions: 24048
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22447
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23825
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 67908372675
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)