Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc8a10
         (163 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q54KA6 Cluster: Putative uncharacterized protein; n=1; ...    31   5.1  
UniRef50_Q16QG7 Cluster: Putative uncharacterized protein; n=1; ...    31   6.8  
UniRef50_Q73BQ4 Cluster: Putative uncharacterized protein; n=1; ...    30   8.9  

>UniRef50_Q54KA6 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 626

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 16/48 (33%), Positives = 26/48 (54%)
 Frame = -3

Query: 149 SNLFFINDTNGNNNHLANK*VFYCFRNSFVIKKPINMPNYSYTPTIGR 6
           + L+F N++N NNN+  NK   +   ++     PI +PN  +   IGR
Sbjct: 459 TGLYFSNNSNNNNNNNNNK---FDIWDTTYYTFPIKLPNLKFLKIIGR 503


>UniRef50_Q16QG7 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 198

 Score = 30.7 bits (66), Expect = 6.8
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
 Frame = -3

Query: 161 FFLMSNLFFINDTNG----NNNHLANK*VFYCFRNSFVIKK 51
           FFL  N FF+   NG    NN  +  +  F C +NSF ++K
Sbjct: 100 FFLAKNKFFLTKNNGFFLQNNIFVLQRTSFSCRKNSFFLQK 140


>UniRef50_Q73BQ4 Cluster: Putative uncharacterized protein; n=1;
           Bacillus cereus ATCC 10987|Rep: Putative uncharacterized
           protein - Bacillus cereus (strain ATCC 10987)
          Length = 36

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 12/29 (41%), Positives = 21/29 (72%)
 Frame = +3

Query: 57  YYKTVTKTVKYLFICEMVIISICIVNKKQ 143
           ++K+VTKT++   IC  +I+  CI N+K+
Sbjct: 9   FFKSVTKTIEIYVIC-YIIVKNCIFNEKR 36


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,080,964
Number of Sequences: 1657284
Number of extensions: 2577822
Number of successful extensions: 8284
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7639
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8241
length of database: 575,637,011
effective HSP length: 33
effective length of database: 520,946,639
effective search space used: 10418932780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)