Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc8a10
         (163 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   0.29 
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    20   2.0  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    20   2.0  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    20   2.0  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    19   3.6  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    19   6.2  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    19   6.2  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       18   8.3  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    18   8.3  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    18   8.3  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    18   8.3  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    18   8.3  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    18   8.3  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    18   8.3  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    18   8.3  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    18   8.3  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    18   8.3  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    18   8.3  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    18   8.3  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    18   8.3  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    18   8.3  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    18   8.3  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 0.29
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +3

Query: 51  FFYYKTVTKTVKYLFICEMVIISICI 128
           +FY   +  T+  LF C ++I+ +CI
Sbjct: 214 YFYSAFIIFTIHLLFYCVLIIL-LCI 238



 Score = 19.4 bits (38), Expect = 3.6
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 51  FFYYKTVTKTVKYLFI 98
           +FYY  +  TV  LF+
Sbjct: 115 YFYYAFIIFTVHLLFL 130



 Score = 18.2 bits (35), Expect = 8.3
 Identities = 6/24 (25%), Positives = 11/24 (45%)
 Frame = +3

Query: 51  FFYYKTVTKTVKYLFICEMVIISI 122
           +FYY  +     Y F    +I ++
Sbjct: 102 YFYYAFIILLCVYYFYYAFIIFTV 125


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 20.2 bits (40), Expect = 2.0
 Identities = 9/32 (28%), Positives = 15/32 (46%)
 Frame = +3

Query: 51  FFYYKTVTKTVKYLFICEMVIISICIVNKKQI 146
           F  YKT    +  L +  +V   IC + K+ +
Sbjct: 346 FMIYKTTNIIILGLNVVYVVTAWICAITKRDM 377



 Score = 19.0 bits (37), Expect = 4.7
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +1

Query: 121 FVSLIKNKFDI 153
           FVS+I+N+F I
Sbjct: 181 FVSIIRNRFVI 191


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 20.2 bits (40), Expect = 2.0
 Identities = 9/32 (28%), Positives = 15/32 (46%)
 Frame = +3

Query: 51  FFYYKTVTKTVKYLFICEMVIISICIVNKKQI 146
           F  YKT    +  L +  +V   IC + K+ +
Sbjct: 71  FMIYKTTNIIILGLNVVYVVTAWICAITKRDM 102


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 20.2 bits (40), Expect = 2.0
 Identities = 6/20 (30%), Positives = 12/20 (60%)
 Frame = -1

Query: 127 IQMEIITISQINKYFTVFVT 68
           +Q    T+ ++  YF +F+T
Sbjct: 216 LQTVFFTVPRVLMYFDIFIT 235


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 19.4 bits (38), Expect = 3.6
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +3

Query: 42  IYRFFYYKTVTKTVKYLFICEMVI 113
           I  F++YKT   TV ++    +V+
Sbjct: 39  INSFYFYKTEQFTVLWVLFTMIVL 62


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 18.6 bits (36), Expect = 6.2
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +2

Query: 92  IYLRDGYYFHLY 127
           IY+R  YY  LY
Sbjct: 62  IYVRHTYYRRLY 73


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 18.6 bits (36), Expect = 6.2
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +2

Query: 92  IYLRDGYYFHLY 127
           IY+R  YY  LY
Sbjct: 62  IYVRHTYYRRLY 73


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 18.2 bits (35), Expect = 8.3
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = -3

Query: 131 NDTNGNNNHLANK*VFYC 78
           +D+N NNN        YC
Sbjct: 459 SDSNNNNNKEEGNSCQYC 476


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 18.2 bits (35), Expect = 8.3
 Identities = 5/7 (71%), Positives = 6/7 (85%)
 Frame = -2

Query: 36  ELFIHPH 16
           E F+HPH
Sbjct: 97  EKFVHPH 103


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis
          triggering hormone receptorisoform B protein.
          Length = 451

 Score = 18.2 bits (35), Expect = 8.3
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -3

Query: 62 VIKKPINMPNYSYTPT 15
          +I+  I+  NY YTP+
Sbjct: 26 LIEFNISTSNYLYTPS 41


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis
          triggering hormone receptorisoform A protein.
          Length = 434

 Score = 18.2 bits (35), Expect = 8.3
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -3

Query: 62 VIKKPINMPNYSYTPT 15
          +I+  I+  NY YTP+
Sbjct: 26 LIEFNISTSNYLYTPS 41


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 18.2 bits (35), Expect = 8.3
 Identities = 5/10 (50%), Positives = 7/10 (70%)
 Frame = +2

Query: 11  RWWGCMNNSA 40
           R+W C N +A
Sbjct: 114 RYWTCWNGTA 123


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
          protein.
          Length = 237

 Score = 18.2 bits (35), Expect = 8.3
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +2

Query: 11 RWWGCMNNSAYL 46
          ++W C NN A L
Sbjct: 40 KYWKCDNNVAEL 51


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
          protein.
          Length = 274

 Score = 18.2 bits (35), Expect = 8.3
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +2

Query: 11 RWWGCMNNSAYL 46
          ++W C NN A L
Sbjct: 40 KYWKCDNNVAEL 51


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 18.2 bits (35), Expect = 8.3
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = -2

Query: 69  QFCNKKTYKYAELFIH 22
           ++CN++  K   L IH
Sbjct: 83  KYCNRQFTKSYNLLIH 98


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 18.2 bits (35), Expect = 8.3
 Identities = 7/25 (28%), Positives = 10/25 (40%)
 Frame = +3

Query: 51  FFYYKTVTKTVKYLFICEMVIISIC 125
           +F Y  V       F C  ++I  C
Sbjct: 53  YFIYAFVAPVKCLAFFCTALVIFYC 77


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 18.2 bits (35), Expect = 8.3
 Identities = 7/25 (28%), Positives = 10/25 (40%)
 Frame = +3

Query: 51  FFYYKTVTKTVKYLFICEMVIISIC 125
           +F Y  V       F C  ++I  C
Sbjct: 286 YFIYAFVAPVKCLAFFCTALVIFYC 310


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 18.2 bits (35), Expect = 8.3
 Identities = 7/25 (28%), Positives = 10/25 (40%)
 Frame = +3

Query: 51  FFYYKTVTKTVKYLFICEMVIISIC 125
           +F Y  V       F C  ++I  C
Sbjct: 286 YFIYAFVAPVKCLAFFCTALVIFYC 310


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 18.2 bits (35), Expect = 8.3
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -3

Query: 134 INDTNGNNNH 105
           I+ T GNNN+
Sbjct: 121 ISSTRGNNNN 130


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 18.2 bits (35), Expect = 8.3
 Identities = 5/10 (50%), Positives = 8/10 (80%)
 Frame = -1

Query: 31  IHTPPPSGVL 2
           +H+PP  G+L
Sbjct: 197 MHSPPGDGIL 206


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 18.2 bits (35), Expect = 8.3
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -3

Query: 134 INDTNGNNNH 105
           I+ T GNNN+
Sbjct: 69  ISSTRGNNNN 78


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 18.2 bits (35), Expect = 8.3
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -3

Query: 134 INDTNGNNNH 105
           I+ T GNNN+
Sbjct: 252 ISSTRGNNNN 261


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,921
Number of Sequences: 336
Number of extensions: 839
Number of successful extensions: 25
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 122,585
effective HSP length: 33
effective length of database: 111,497
effective search space used:  2229940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)