Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc8a10
         (163 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325105-1|ABD14119.1|  180|Apis mellifera complementary sex det...    27   0.016
AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex det...    27   0.016
DQ325104-1|ABD14118.1|  180|Apis mellifera complementary sex det...    25   0.064
DQ325077-1|ABD14091.1|  181|Apis mellifera complementary sex det...    23   0.34 
DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex det...    22   0.60 
DQ325100-1|ABD14114.1|  183|Apis mellifera complementary sex det...    22   0.60 
DQ325099-1|ABD14113.1|  183|Apis mellifera complementary sex det...    22   0.60 
DQ325098-1|ABD14112.1|  183|Apis mellifera complementary sex det...    22   0.60 
DQ325097-1|ABD14111.1|  183|Apis mellifera complementary sex det...    22   0.60 
DQ325096-1|ABD14110.1|  183|Apis mellifera complementary sex det...    22   0.60 
DQ325095-1|ABD14109.1|  183|Apis mellifera complementary sex det...    22   0.60 
DQ325101-1|ABD14115.1|  182|Apis mellifera complementary sex det...    22   0.79 
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   1.0  
M29492-1|AAA27727.1|   74|Apis mellifera protein ( Bee homeobox-...    21   1.8  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    20   2.4  
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    19   4.2  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          19   4.2  
AB083209-1|BAC54133.1|   87|Apis mellifera hypothetical protein ...    19   4.2  
DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    19   5.6  
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    19   5.6  
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    19   5.6  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    19   7.4  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    19   7.4  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          18   9.8  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    18   9.8  

>DQ325105-1|ABD14119.1|  180|Apis mellifera complementary sex
           determiner protein.
          Length = 180

 Score = 27.5 bits (58), Expect = 0.016
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = -3

Query: 152 MSNLFFINDTNGNNNHLANK*VFYCFRNSFVIKKPINMPNY 30
           +SN +  N +N NNN+  NK ++Y       I  P+ +P Y
Sbjct: 85  LSNNYISNISNYNNNNNYNKKLYYNINYIEQIPVPVPVPIY 125


>AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex
           determiner protein.
          Length = 418

 Score = 27.5 bits (58), Expect = 0.016
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = -3

Query: 152 MSNLFFINDTNGNNNHLANK*VFYCFRNSFVIKKPINMPNY 30
           +SN +  N +N NNN+  NK ++Y       I  P+ +P Y
Sbjct: 323 LSNNYISNISNYNNNNNYNKKLYYNINYIEQIPVPVPVPIY 363


>DQ325104-1|ABD14118.1|  180|Apis mellifera complementary sex
           determiner protein.
          Length = 180

 Score = 25.4 bits (53), Expect = 0.064
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = -3

Query: 152 MSNLFFINDTNGNNNHLANK*VFYCFRNSFVIKKPINMPNY 30
           +SN +  N +N NN++  NK ++Y       I  P+ +P Y
Sbjct: 85  LSNNYISNISNYNNDNNYNKKLYYNINYIEQIPVPVPVPIY 125


>DQ325077-1|ABD14091.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.0 bits (47), Expect = 0.34
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = -3

Query: 152 MSNLFFINDTNGNNNHLAN-K*VFYCFRNSFVIKKPINMPNY 30
           +SN    N+ N NNN+  N K ++Y       +  PI +P Y
Sbjct: 85  LSNKTIHNNNNYNNNNYNNYKKLYYNINYIEQVPVPIPVPIY 126


>DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 22.2 bits (45), Expect = 0.60
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -3

Query: 131 NDTNGNNNHLANK*VFYCFRNSFVIKKPINMPNY 30
           N+ N NNN+   K ++Y       I  P+ +P Y
Sbjct: 95  NNYNNNNNYNNYKKLYYNINYIEQIPVPVPVPIY 128


>DQ325100-1|ABD14114.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 22.2 bits (45), Expect = 0.60
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -3

Query: 131 NDTNGNNNHLANK*VFYCFRNSFVIKKPINMPNY 30
           N+ N NNN+   K ++Y       I  P+ +P Y
Sbjct: 95  NNYNNNNNYNNYKKLYYNINYIEQIPVPVPVPIY 128


>DQ325099-1|ABD14113.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 22.2 bits (45), Expect = 0.60
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -3

Query: 131 NDTNGNNNHLANK*VFYCFRNSFVIKKPINMPNY 30
           N+ N NNN+   K ++Y       I  P+ +P Y
Sbjct: 95  NNYNNNNNYNNYKKLYYNINYIEQIPVPVPVPIY 128


>DQ325098-1|ABD14112.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 22.2 bits (45), Expect = 0.60
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -3

Query: 131 NDTNGNNNHLANK*VFYCFRNSFVIKKPINMPNY 30
           N+ N NNN+   K ++Y       I  P+ +P Y
Sbjct: 95  NNYNNNNNYNNYKKLYYNINYIEQIPVPVPVPIY 128


>DQ325097-1|ABD14111.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 22.2 bits (45), Expect = 0.60
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -3

Query: 131 NDTNGNNNHLANK*VFYCFRNSFVIKKPINMPNY 30
           N+ N NNN+   K ++Y       I  P+ +P Y
Sbjct: 95  NNYNNNNNYNNYKKLYYNINYIEQIPVPVPVPIY 128


>DQ325096-1|ABD14110.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 22.2 bits (45), Expect = 0.60
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -3

Query: 131 NDTNGNNNHLANK*VFYCFRNSFVIKKPINMPNY 30
           N+ N NNN+   K ++Y       I  P+ +P Y
Sbjct: 95  NNYNNNNNYNNYKKLYYNINYIEQIPVPVPVPIY 128


>DQ325095-1|ABD14109.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 22.2 bits (45), Expect = 0.60
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -3

Query: 131 NDTNGNNNHLANK*VFYCFRNSFVIKKPINMPNY 30
           N+ N NNN+   K ++Y       I  P+ +P Y
Sbjct: 95  NNYNNNNNYNNYKKLYYNINYIEQIPVPVPVPIY 128


>DQ325101-1|ABD14115.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 21.8 bits (44), Expect = 0.79
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -3

Query: 131 NDTNGNNNHLANK*VFYCFRNSFVIKKPINMPNY 30
           N+ N NNN+   K ++Y       I  P+ +P Y
Sbjct: 95  NNYNNNNNYNNYKKLYYNINYIEQIPIPVPVPIY 128


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.4 bits (43), Expect = 1.0
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 59  IKKPINMPNYSYTPTIGR 6
           +++P   PNYS   TIG+
Sbjct: 509 VRQPGKAPNYSVNWTIGQ 526


>M29492-1|AAA27727.1|   74|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone H40. ).
          Length = 74

 Score = 20.6 bits (41), Expect = 1.8
 Identities = 6/18 (33%), Positives = 13/18 (72%)
 Frame = +3

Query: 75  KTVKYLFICEMVIISICI 128
           KT +YL +CE + +++ +
Sbjct: 28  KTTRYLSVCERLNLALSL 45


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
          protein.
          Length = 377

 Score = 20.2 bits (40), Expect = 2.4
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = -2

Query: 45 KYAELFIHPHHRAY 4
          +Y++L +HPH RA+
Sbjct: 37 EYSDL-VHPHWRAF 49


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 19.4 bits (38), Expect = 4.2
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +2

Query: 59  LQNCYENSKILIYL 100
           L+NC E  K+L+ L
Sbjct: 64  LRNCLEKLKVLVPL 77


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 19.4 bits (38), Expect = 4.2
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -3

Query: 131 NDTNGNNNHLAN 96
           N+ N NNN+ AN
Sbjct: 244 NNNNNNNNNGAN 255


>AB083209-1|BAC54133.1|   87|Apis mellifera hypothetical protein
          protein.
          Length = 87

 Score = 19.4 bits (38), Expect = 4.2
 Identities = 6/6 (100%), Positives = 6/6 (100%)
 Frame = +3

Query: 45 YRFFYY 62
          YRFFYY
Sbjct: 82 YRFFYY 87


>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 19.0 bits (37), Expect = 5.6
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -3

Query: 152 MSNLFFINDTNGNNNHLAN 96
           +SN    N+ N NNN+  N
Sbjct: 85  LSNKTIHNNNNYNNNNYNN 103


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 19.0 bits (37), Expect = 5.6
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +3

Query: 30  IIRHIYRFFYYKTVTKTVKYLFICEMV 110
           IIR    F+    +  TV   F+C +V
Sbjct: 228 IIRRKTLFYTVNLILPTVLISFLCVLV 254


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 19.0 bits (37), Expect = 5.6
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -3

Query: 152 MSNLFFINDTNGNNNHLAN 96
           +SN    N+ N NNN+  N
Sbjct: 318 LSNKTIHNNNNYNNNNYNN 336


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 18.6 bits (36), Expect = 7.4
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -1

Query: 142 CFLLTIQMEIITISQINKY 86
           C L TI+++ +  S   KY
Sbjct: 130 CLLFTIELDRVLESPRGKY 148


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 18.6 bits (36), Expect = 7.4
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -1

Query: 142 CFLLTIQMEIITISQINKY 86
           C L TI+++ +  S   KY
Sbjct: 145 CLLFTIELDRVLESPRGKY 163


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 18.2 bits (35), Expect = 9.8
 Identities = 4/7 (57%), Positives = 7/7 (100%)
 Frame = -1

Query: 43  ICRIIHT 23
           +CR++HT
Sbjct: 84  VCRVLHT 90


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 18.2 bits (35), Expect = 9.8
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -3

Query: 134 INDTNGNNNH 105
           IN+TN NN +
Sbjct: 134 INNTNNNNTN 143


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,441
Number of Sequences: 438
Number of extensions: 749
Number of successful extensions: 25
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 33
effective length of database: 131,889
effective search space used:  2637780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)