Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc8a08
         (311 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydroge...    23   3.5  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    22   4.6  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    22   6.1  
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    21   8.1  

>AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine
           dehydrogenase protein.
          Length = 1325

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 15/61 (24%), Positives = 26/61 (42%)
 Frame = -2

Query: 265 KLYNREIKQKTKTIIVKRPTTMNRIQIDWKPHSEDEQKMTKQEIAENIVKPCFEQFGTIL 86
           KL +  +  +T      RPTT+N +    K H E +  +   E+   +    FE   + +
Sbjct: 209 KLDSESLVFRTSRTAWYRPTTLNDLLALKKAHPETKIVVGNTEVGVEVKFKHFEYPSSPI 268

Query: 85  H 83
           H
Sbjct: 269 H 269


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +1

Query: 52  FGCDLKDIRICVIWCQIVQNKALQCFRQ 135
           F  +LK ++I V  CQ  Q+ ALQ  R+
Sbjct: 20  FAFNLKVMQINVDHCQAGQDLALQAARE 47


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +1

Query: 55   GCDLKDIRICVIWCQIVQNKAL 120
            GC + ++   VIW  +V++ AL
Sbjct: 1901 GCAVYEVAYQVIWICLVEDSAL 1922


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +2

Query: 113 RLYNVFGNLLFSHFLFVFGMGFPIYLNSVHS 205
           + Y +F     +HFL  F + FP  L + HS
Sbjct: 393 QFYKLFIVDFATHFLVTFFVNFPRALFARHS 423


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 299,558
Number of Sequences: 2352
Number of extensions: 5024
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 20316549
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)