Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc8a08
(311 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81483-8|CAB03966.2| 1776|Caenorhabditis elegans Hypothetical pr... 30 0.39
Z81471-1|CAB03887.2| 1776|Caenorhabditis elegans Hypothetical pr... 30 0.39
AF025463-2|AAB71006.1| 387|Caenorhabditis elegans Serpentine re... 29 0.90
U46671-6|AAA85751.2| 133|Caenorhabditis elegans Hypothetical pr... 28 1.6
AF038613-11|AAB92054.2| 836|Caenorhabditis elegans Mammalian el... 28 1.6
Z73896-4|CAA98057.2| 503|Caenorhabditis elegans Hypothetical pr... 27 2.1
Z35719-8|CAA84801.1| 1521|Caenorhabditis elegans Hypothetical pr... 27 2.8
Z35663-17|CAA84737.1| 1521|Caenorhabditis elegans Hypothetical p... 27 2.8
D14635-1|BAA03484.1| 1521|Caenorhabditis elegans EMB-5 protein. 27 2.8
Z70287-8|CAA94301.2| 1717|Caenorhabditis elegans Hypothetical pr... 27 3.6
U41010-4|AAV28333.1| 1622|Caenorhabditis elegans Hypothetical pr... 27 3.6
AF125463-3|AAD12860.1| 163|Caenorhabditis elegans Hypothetical ... 27 3.6
U64835-7|AAG24198.2| 427|Caenorhabditis elegans Hypothetical pr... 26 4.8
AF016656-4|AAB66039.3| 429|Caenorhabditis elegans Hypothetical ... 26 4.8
Z81077-3|CAB03067.1| 527|Caenorhabditis elegans Hypothetical pr... 26 6.4
Z22180-3|CAA80175.1| 228|Caenorhabditis elegans Hypothetical pr... 26 6.4
U41264-6|AAA82426.1| 437|Caenorhabditis elegans Hypothetical pr... 25 8.4
U28736-2|AAA68307.1| 620|Caenorhabditis elegans Hypothetical pr... 25 8.4
U23525-5|AAC46568.1| 465|Caenorhabditis elegans Yeast smf (diva... 25 8.4
AF098989-2|AAK18954.3| 346|Caenorhabditis elegans Hypothetical ... 25 8.4
AC024817-23|AAV34784.1| 430|Caenorhabditis elegans C-type lecti... 25 8.4
AC024817-22|AAK68532.2| 464|Caenorhabditis elegans C-type lecti... 25 8.4
>Z81483-8|CAB03966.2| 1776|Caenorhabditis elegans Hypothetical protein
C14B4.2 protein.
Length = 1776
Score = 29.9 bits (64), Expect = 0.39
Identities = 20/70 (28%), Positives = 32/70 (45%)
Frame = -2
Query: 301 VVSYQFIFDRVQKLYNREIKQKTKTIIVKRPTTMNRIQIDWKPHSEDEQKMTKQEIAENI 122
+V FI R + +Y ++KQK +TI RP IQ + S ++ M K ++ I
Sbjct: 1645 IVRTDFIICRDRNIYLAKLKQKVQTICAPRPVLTMPIQ---RMPSSNDLVMKKLQVKNAI 1701
Query: 121 VKPCFEQFGT 92
FG+
Sbjct: 1702 SNLDLRSFGS 1711
>Z81471-1|CAB03887.2| 1776|Caenorhabditis elegans Hypothetical protein
C14B4.2 protein.
Length = 1776
Score = 29.9 bits (64), Expect = 0.39
Identities = 20/70 (28%), Positives = 32/70 (45%)
Frame = -2
Query: 301 VVSYQFIFDRVQKLYNREIKQKTKTIIVKRPTTMNRIQIDWKPHSEDEQKMTKQEIAENI 122
+V FI R + +Y ++KQK +TI RP IQ + S ++ M K ++ I
Sbjct: 1645 IVRTDFIICRDRNIYLAKLKQKVQTICAPRPVLTMPIQ---RMPSSNDLVMKKLQVKNAI 1701
Query: 121 VKPCFEQFGT 92
FG+
Sbjct: 1702 SNLDLRSFGS 1711
>AF025463-2|AAB71006.1| 387|Caenorhabditis elegans Serpentine
receptor, class t protein54 protein.
Length = 387
Score = 28.7 bits (61), Expect = 0.90
Identities = 10/30 (33%), Positives = 20/30 (66%)
Frame = +3
Query: 183 SI*ILFIVVGRFTIIVLVFCLISRLYNFCT 272
+I ++F+V G +++ +FC I+ +Y CT
Sbjct: 41 TIGVIFLVYGILLVVLNIFCSIAIIYTKCT 70
>U46671-6|AAA85751.2| 133|Caenorhabditis elegans Hypothetical
protein C14E2.1 protein.
Length = 133
Score = 27.9 bits (59), Expect = 1.6
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = -2
Query: 286 FIFDRVQKLYNREIKQKTKTIIVKRPT-TMNRIQIDWKPHSEDEQKMTKQEIAENIVKPC 110
FIF + + N +KQ I K T T ++ + +SED Q++ + ++ K C
Sbjct: 65 FIFVESEYMLNENMKQGMPVIWEKSITSTEYPVEDESSDNSEDTQEILLPSVGDSPTKTC 124
Query: 109 FEQFGTIL 86
+F +L
Sbjct: 125 CCEFSRLL 132
>AF038613-11|AAB92054.2| 836|Caenorhabditis elegans Mammalian
elks/cast/erc/rab6 interactingprotein homolog protein 1
protein.
Length = 836
Score = 27.9 bits (59), Expect = 1.6
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = -2
Query: 250 EIKQKTKTIIVKRPTTMNRIQIDWKPHSEDEQKMTKQE 137
++K + T++ K TMN I+ W P + E++M + E
Sbjct: 161 QLKVEYDTMMEKLNQTMNSIKTFWSPELKRERQMRRDE 198
>Z73896-4|CAA98057.2| 503|Caenorhabditis elegans Hypothetical
protein F09E8.6 protein.
Length = 503
Score = 27.5 bits (58), Expect = 2.1
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Frame = -1
Query: 161 RTKND*TRDCRKHCKALF*TIWHHITHIRMSFKSQPNYCR----VCKLRVST 18
R++N D HC +W + H + S K +YCR +C++ V+T
Sbjct: 374 RSRNKKCEDLNAHCG-----MWEQLGHCQHSVKYMAHYCRKACNLCEVEVTT 420
>Z35719-8|CAA84801.1| 1521|Caenorhabditis elegans Hypothetical
protein T04A8.14 protein.
Length = 1521
Score = 27.1 bits (57), Expect = 2.8
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = -2
Query: 187 IDWKPHSEDEQKMTKQEIAENIVKPCFEQFGTILH 83
++WK H ++ M E AE V P F +L+
Sbjct: 522 LNWKKHDIEQDPMLPLEAAEEYVCPAFSDSDMVLN 556
>Z35663-17|CAA84737.1| 1521|Caenorhabditis elegans Hypothetical
protein T04A8.14 protein.
Length = 1521
Score = 27.1 bits (57), Expect = 2.8
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = -2
Query: 187 IDWKPHSEDEQKMTKQEIAENIVKPCFEQFGTILH 83
++WK H ++ M E AE V P F +L+
Sbjct: 522 LNWKKHDIEQDPMLPLEAAEEYVCPAFSDSDMVLN 556
>D14635-1|BAA03484.1| 1521|Caenorhabditis elegans EMB-5 protein.
Length = 1521
Score = 27.1 bits (57), Expect = 2.8
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = -2
Query: 187 IDWKPHSEDEQKMTKQEIAENIVKPCFEQFGTILH 83
++WK H ++ M E AE V P F +L+
Sbjct: 522 LNWKKHDIEQDPMLPLEAAEEYVCPAFSDSDMVLN 556
>Z70287-8|CAA94301.2| 1717|Caenorhabditis elegans Hypothetical
protein R09E10.7 protein.
Length = 1717
Score = 26.6 bits (56), Expect = 3.6
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -1
Query: 125 HCKALF*TIWHHITHIRMSFKSQPNYCR 42
HC + T HH THI + +P CR
Sbjct: 368 HCDIQYLTATHHPTHIEWTTMIKPLRCR 395
>U41010-4|AAV28333.1| 1622|Caenorhabditis elegans Hypothetical protein
T05A12.4a protein.
Length = 1622
Score = 26.6 bits (56), Expect = 3.6
Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = -2
Query: 130 ENIVKPCFEQFGTILHIY-VCPLNHNRIIVEYANSESVQKAMT 5
+ I+ P FEQ G +LH Y + L I+ + Q+ +T
Sbjct: 1235 KRIITPFFEQIGDVLHAYRLIALTLAEIVDRFDELSQAQRRIT 1277
>AF125463-3|AAD12860.1| 163|Caenorhabditis elegans Hypothetical
protein Y49F6C.8 protein.
Length = 163
Score = 26.6 bits (56), Expect = 3.6
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = -2
Query: 226 IIVKRPTTMNRIQIDWKPHSEDEQKMTKQEIAE 128
+ +K+P T N +Q + H E++Q+ +Q I +
Sbjct: 30 LTIKQPVTQNSLQRYQEEHREEKQQYLRQAILD 62
>U64835-7|AAG24198.2| 427|Caenorhabditis elegans Hypothetical
protein T09D3.4 protein.
Length = 427
Score = 26.2 bits (55), Expect = 4.8
Identities = 16/59 (27%), Positives = 26/59 (44%)
Frame = -2
Query: 283 IFDRVQKLYNREIKQKTKTIIVKRPTTMNRIQIDWKPHSEDEQKMTKQEIAENIVKPCF 107
+FDR+++ K+I K+ T + +DWK + + E A N VK F
Sbjct: 250 VFDRLERAQMSVKIFGEKSITEKKTTLSSYCAVDWKNVKINPETAINTEQANNYVKAEF 308
>AF016656-4|AAB66039.3| 429|Caenorhabditis elegans Hypothetical
protein C35A11.1 protein.
Length = 429
Score = 26.2 bits (55), Expect = 4.8
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = +3
Query: 99 NCSKQGFTMFSAISCLVIFCSSSEWGFQSI*ILFIVVGRFTIIVLVFCLISRL 257
N S+ +T + + + C +W I ILF ++ +I L F L+S++
Sbjct: 200 NYSEPVYTFMVSHAATINNCRLFKWNIWMIGILFKIIPCILLIFLSFGLVSKI 252
>Z81077-3|CAB03067.1| 527|Caenorhabditis elegans Hypothetical
protein F36A2.2 protein.
Length = 527
Score = 25.8 bits (54), Expect = 6.4
Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = -2
Query: 256 NREIKQKTKTIIVKRPTTMNRIQIDWKPHSEDEQKMTKQEIA-ENIV 119
NRE++ +T ++ MN I++ +PH + +E+A E+IV
Sbjct: 379 NREVEARTLFENIRNGILMNAIEVSKQPHWISKPYFRLKEVAKESIV 425
>Z22180-3|CAA80175.1| 228|Caenorhabditis elegans Hypothetical
protein K11H3.2 protein.
Length = 228
Score = 25.8 bits (54), Expect = 6.4
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 64 LKDIRICVIWCQIVQNKALQCFRQS 138
LKD ++C I+ I+QN AL +S
Sbjct: 38 LKDPKLCAIYKMILQNSALLLIEKS 62
>U41264-6|AAA82426.1| 437|Caenorhabditis elegans Hypothetical
protein F10E7.10 protein.
Length = 437
Score = 25.4 bits (53), Expect = 8.4
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = -2
Query: 94 TILHIYVCPLNHNRIIVEYANSESVQ 17
++ H++ C NHN I+V+ + E Q
Sbjct: 176 SVFHVWSCDGNHNGILVQNCHVEDGQ 201
>U28736-2|AAA68307.1| 620|Caenorhabditis elegans Hypothetical
protein F26A10.2 protein.
Length = 620
Score = 25.4 bits (53), Expect = 8.4
Identities = 13/46 (28%), Positives = 19/46 (41%), Gaps = 4/46 (8%)
Frame = -1
Query: 128 KHCKALF*TIWHHITHIRMSFKSQPNYCRVC----KLRVSTKSHDC 3
K C LF ++W+ H +P C+ C K R + H C
Sbjct: 51 KDCGKLFNSVWYLKQHAVKHSNDRPFKCKFCFKTYKFRSNLYQHKC 96
>U23525-5|AAC46568.1| 465|Caenorhabditis elegans Yeast smf
(divalent cation transporter)homolog protein 2 protein.
Length = 465
Score = 25.4 bits (53), Expect = 8.4
Identities = 7/23 (30%), Positives = 16/23 (69%)
Frame = +3
Query: 192 ILFIVVGRFTIIVLVFCLISRLY 260
++F+++G FT++ + F L +Y
Sbjct: 402 LIFVIIGPFTLLYIAFILYLAIY 424
>AF098989-2|AAK18954.3| 346|Caenorhabditis elegans Hypothetical
protein F47G6.3 protein.
Length = 346
Score = 25.4 bits (53), Expect = 8.4
Identities = 9/42 (21%), Positives = 24/42 (57%)
Frame = -2
Query: 277 DRVQKLYNREIKQKTKTIIVKRPTTMNRIQIDWKPHSEDEQK 152
++ +++ + ++++T I KRP ++++ K E+E K
Sbjct: 149 EKKEEIKKKTVRRETNFITYKRPGINKNVEVNRKKQFEEELK 190
>AC024817-23|AAV34784.1| 430|Caenorhabditis elegans C-type lectin
protein 82, isoform b protein.
Length = 430
Score = 25.4 bits (53), Expect = 8.4
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -2
Query: 154 KMTKQEIAENIVKPCFEQF-GTILHIYVCPLNHNRIIVEY 38
+++ +A++IV + F GT + +VC N N I EY
Sbjct: 83 QLSHDYVAQSIVNAKWNTFLGTEKNFFVCSYNPNFITTEY 122
>AC024817-22|AAK68532.2| 464|Caenorhabditis elegans C-type lectin
protein 82, isoform a protein.
Length = 464
Score = 25.4 bits (53), Expect = 8.4
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -2
Query: 154 KMTKQEIAENIVKPCFEQF-GTILHIYVCPLNHNRIIVEY 38
+++ +A++IV + F GT + +VC N N I EY
Sbjct: 117 QLSHDYVAQSIVNAKWNTFLGTEKNFFVCSYNPNFITTEY 156
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,728,959
Number of Sequences: 27780
Number of extensions: 121189
Number of successful extensions: 475
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 467
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 475
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 344570176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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