Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc8a04
         (758 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075249-1|AAL68116.1|  430|Drosophila melanogaster AT21437p pro...   333   1e-91
AF125157-1|AAF20167.1|  420|Drosophila melanogaster tryptophanyl...   333   1e-91
AF125156-1|AAF20166.1|  430|Drosophila melanogaster tryptophanyl...   333   1e-91
AE014297-898|AAF54352.1|  430|Drosophila melanogaster CG9735-PB,...   333   1e-91
AE014297-897|AAG22136.1|  430|Drosophila melanogaster CG9735-PA,...   333   1e-91
L01790-1|AAA28932.1|  384|Drosophila melanogaster TH1 protein.         29   5.2  
AE014297-4816|AAF57203.2|  644|Drosophila melanogaster CG2112-PA...    29   6.9  

>AY075249-1|AAL68116.1|  430|Drosophila melanogaster AT21437p
           protein.
          Length = 430

 Score =  333 bits (819), Expect = 1e-91
 Identities = 143/208 (68%), Positives = 175/208 (84%)
 Frame = +2

Query: 134 AIAEDEDFVDPWTVTGKSDTGIDYDKLIKRFGSQKIDDELIQRFEKVIGRKAHHLLRRGI 313
           A A  ED VDPW V   +D G+DYDKLIKRFGS KID+ELI RFEK+ G+ AHH +RRG+
Sbjct: 38  ATAPTEDVVDPWNVASSNDAGVDYDKLIKRFGSSKIDEELIARFEKITGKPAHHFIRRGM 97

Query: 314 FFSHRDLNVILNLHEAGKKFYLYTGRGPSSDSMHLGHMIPFMFTKWLQDVFNVPLIIQLT 493
           FFSHRDL+ IL L E GK FYLYTGRGPSS S+H+GH++PF+ TKWLQ+ F+VPL+IQLT
Sbjct: 98  FFSHRDLHTILTLREQGKPFYLYTGRGPSSGSLHVGHLVPFIMTKWLQETFDVPLVIQLT 157

Query: 494 DDEKVLWRDIKVEDARKMAYNNAKDIIAIGFDPSNTFIFNDLDFIGQCPAFYQNMLRIQK 673
           DDEK LW+D+KVEDA K+   NAKDI+AIGFD + TFIFN+L+F+G+CPA YQN++RIQK
Sbjct: 158 DDEKTLWKDLKVEDAIKLGRENAKDIVAIGFDVNKTFIFNNLEFVGKCPAMYQNIIRIQK 217

Query: 674 CVTYNQVKGIFXFGDSDVIGQITFPSIE 757
           CVT+NQVKGIF FGDSD+IG+I FP+ +
Sbjct: 218 CVTFNQVKGIFGFGDSDIIGKIGFPAAQ 245


>AF125157-1|AAF20167.1|  420|Drosophila melanogaster
           tryptophanyl-tRNA synthetase protein.
          Length = 420

 Score =  333 bits (819), Expect = 1e-91
 Identities = 143/208 (68%), Positives = 175/208 (84%)
 Frame = +2

Query: 134 AIAEDEDFVDPWTVTGKSDTGIDYDKLIKRFGSQKIDDELIQRFEKVIGRKAHHLLRRGI 313
           A A  ED VDPW V   +D G+DYDKLIKRFGS KID+ELI RFEK+ G+ AHH +RRG+
Sbjct: 28  ATAPTEDVVDPWNVASSNDAGVDYDKLIKRFGSSKIDEELIARFEKITGKPAHHFIRRGM 87

Query: 314 FFSHRDLNVILNLHEAGKKFYLYTGRGPSSDSMHLGHMIPFMFTKWLQDVFNVPLIIQLT 493
           FFSHRDL+ IL L E GK FYLYTGRGPSS S+H+GH++PF+ TKWLQ+ F+VPL+IQLT
Sbjct: 88  FFSHRDLHTILTLREQGKPFYLYTGRGPSSGSLHVGHLVPFIMTKWLQETFDVPLVIQLT 147

Query: 494 DDEKVLWRDIKVEDARKMAYNNAKDIIAIGFDPSNTFIFNDLDFIGQCPAFYQNMLRIQK 673
           DDEK LW+D+KVEDA K+   NAKDI+AIGFD + TFIFN+L+F+G+CPA YQN++RIQK
Sbjct: 148 DDEKTLWKDLKVEDAIKLGRENAKDIVAIGFDVNKTFIFNNLEFVGKCPAMYQNIIRIQK 207

Query: 674 CVTYNQVKGIFXFGDSDVIGQITFPSIE 757
           CVT+NQVKGIF FGDSD+IG+I FP+ +
Sbjct: 208 CVTFNQVKGIFGFGDSDIIGKIGFPAAQ 235


>AF125156-1|AAF20166.1|  430|Drosophila melanogaster
           tryptophanyl-tRNA synthetase protein.
          Length = 430

 Score =  333 bits (819), Expect = 1e-91
 Identities = 143/208 (68%), Positives = 175/208 (84%)
 Frame = +2

Query: 134 AIAEDEDFVDPWTVTGKSDTGIDYDKLIKRFGSQKIDDELIQRFEKVIGRKAHHLLRRGI 313
           A A  ED VDPW V   +D G+DYDKLIKRFGS KID+ELI RFEK+ G+ AHH +RRG+
Sbjct: 38  ATAPTEDVVDPWNVASSNDAGVDYDKLIKRFGSSKIDEELIARFEKITGKPAHHFIRRGM 97

Query: 314 FFSHRDLNVILNLHEAGKKFYLYTGRGPSSDSMHLGHMIPFMFTKWLQDVFNVPLIIQLT 493
           FFSHRDL+ IL L E GK FYLYTGRGPSS S+H+GH++PF+ TKWLQ+ F+VPL+IQLT
Sbjct: 98  FFSHRDLHTILTLREQGKPFYLYTGRGPSSGSLHVGHLVPFIMTKWLQETFDVPLVIQLT 157

Query: 494 DDEKVLWRDIKVEDARKMAYNNAKDIIAIGFDPSNTFIFNDLDFIGQCPAFYQNMLRIQK 673
           DDEK LW+D+KVEDA K+   NAKDI+AIGFD + TFIFN+L+F+G+CPA YQN++RIQK
Sbjct: 158 DDEKTLWKDLKVEDAIKLGRENAKDIVAIGFDVNKTFIFNNLEFVGKCPAMYQNIIRIQK 217

Query: 674 CVTYNQVKGIFXFGDSDVIGQITFPSIE 757
           CVT+NQVKGIF FGDSD+IG+I FP+ +
Sbjct: 218 CVTFNQVKGIFGFGDSDIIGKIGFPAAQ 245


>AE014297-898|AAF54352.1|  430|Drosophila melanogaster CG9735-PB,
           isoform B protein.
          Length = 430

 Score =  333 bits (819), Expect = 1e-91
 Identities = 143/208 (68%), Positives = 175/208 (84%)
 Frame = +2

Query: 134 AIAEDEDFVDPWTVTGKSDTGIDYDKLIKRFGSQKIDDELIQRFEKVIGRKAHHLLRRGI 313
           A A  ED VDPW V   +D G+DYDKLIKRFGS KID+ELI RFEK+ G+ AHH +RRG+
Sbjct: 38  ATAPTEDVVDPWNVASSNDAGVDYDKLIKRFGSSKIDEELIARFEKITGKPAHHFIRRGM 97

Query: 314 FFSHRDLNVILNLHEAGKKFYLYTGRGPSSDSMHLGHMIPFMFTKWLQDVFNVPLIIQLT 493
           FFSHRDL+ IL L E GK FYLYTGRGPSS S+H+GH++PF+ TKWLQ+ F+VPL+IQLT
Sbjct: 98  FFSHRDLHTILTLREQGKPFYLYTGRGPSSGSLHVGHLVPFIMTKWLQETFDVPLVIQLT 157

Query: 494 DDEKVLWRDIKVEDARKMAYNNAKDIIAIGFDPSNTFIFNDLDFIGQCPAFYQNMLRIQK 673
           DDEK LW+D+KVEDA K+   NAKDI+AIGFD + TFIFN+L+F+G+CPA YQN++RIQK
Sbjct: 158 DDEKTLWKDLKVEDAIKLGRENAKDIVAIGFDVNKTFIFNNLEFVGKCPAMYQNIIRIQK 217

Query: 674 CVTYNQVKGIFXFGDSDVIGQITFPSIE 757
           CVT+NQVKGIF FGDSD+IG+I FP+ +
Sbjct: 218 CVTFNQVKGIFGFGDSDIIGKIGFPAAQ 245


>AE014297-897|AAG22136.1|  430|Drosophila melanogaster CG9735-PA,
           isoform A protein.
          Length = 430

 Score =  333 bits (819), Expect = 1e-91
 Identities = 143/208 (68%), Positives = 175/208 (84%)
 Frame = +2

Query: 134 AIAEDEDFVDPWTVTGKSDTGIDYDKLIKRFGSQKIDDELIQRFEKVIGRKAHHLLRRGI 313
           A A  ED VDPW V   +D G+DYDKLIKRFGS KID+ELI RFEK+ G+ AHH +RRG+
Sbjct: 38  ATAPTEDVVDPWNVASSNDAGVDYDKLIKRFGSSKIDEELIARFEKITGKPAHHFIRRGM 97

Query: 314 FFSHRDLNVILNLHEAGKKFYLYTGRGPSSDSMHLGHMIPFMFTKWLQDVFNVPLIIQLT 493
           FFSHRDL+ IL L E GK FYLYTGRGPSS S+H+GH++PF+ TKWLQ+ F+VPL+IQLT
Sbjct: 98  FFSHRDLHTILTLREQGKPFYLYTGRGPSSGSLHVGHLVPFIMTKWLQETFDVPLVIQLT 157

Query: 494 DDEKVLWRDIKVEDARKMAYNNAKDIIAIGFDPSNTFIFNDLDFIGQCPAFYQNMLRIQK 673
           DDEK LW+D+KVEDA K+   NAKDI+AIGFD + TFIFN+L+F+G+CPA YQN++RIQK
Sbjct: 158 DDEKTLWKDLKVEDAIKLGRENAKDIVAIGFDVNKTFIFNNLEFVGKCPAMYQNIIRIQK 217

Query: 674 CVTYNQVKGIFXFGDSDVIGQITFPSIE 757
           CVT+NQVKGIF FGDSD+IG+I FP+ +
Sbjct: 218 CVTFNQVKGIFGFGDSDIIGKIGFPAAQ 245


>L01790-1|AAA28932.1|  384|Drosophila melanogaster TH1 protein.
          Length = 384

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +2

Query: 512 WRDIKVEDARKMAYNNAKDIIAIGFDP 592
           WR +KV + + M  N+ K++I   FDP
Sbjct: 11  WRAVKVTEVQAMVENHLKEMILKSFDP 37


>AE014297-4816|AAF57203.2|  644|Drosophila melanogaster CG2112-PA
           protein.
          Length = 644

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 6/46 (13%)
 Frame = +2

Query: 494 DDEKVL-W---RDI--KVEDARKMAYNNAKDIIAIGFDPSNTFIFN 613
           DD++VL W   R++  K+   R M   +A +I  +GFD  N++IF+
Sbjct: 116 DDKRVLLWNIDRELVSKLGKPRSMNEKHASNIFCLGFDTQNSYIFS 161


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,678,329
Number of Sequences: 53049
Number of extensions: 669538
Number of successful extensions: 1685
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1662
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1685
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3478915869
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)