Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc7p23
         (603 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00006CB6ED Cluster: hypothetical protein TTHERM_0049...    34   3.0  
UniRef50_Q59G33 Cluster: Alpha 1,2-mannosidase variant; n=9; Eut...    32   9.1  
UniRef50_Q9UKM7 Cluster: Endoplasmic reticulum mannosyl-oligosac...    32   9.1  

>UniRef50_UPI00006CB6ED Cluster: hypothetical protein
           TTHERM_00494200; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00494200 - Tetrahymena
           thermophila SB210
          Length = 523

 Score = 33.9 bits (74), Expect = 3.0
 Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
 Frame = -1

Query: 582 HFQNIKSK*LNFYFNSLINYFSVKRDSLTSCSK*K-SAFQEAKINKAKR 439
           + QN     LNFY +  INYF +K++SL   S+ + S FQ+ +  + K+
Sbjct: 298 YLQNKMVVHLNFYLSLQINYFKLKKESLNQLSEDEDSQFQQREFRERKQ 346


>UniRef50_Q59G33 Cluster: Alpha 1,2-mannosidase variant; n=9;
           Euteleostomi|Rep: Alpha 1,2-mannosidase variant - Homo
           sapiens (Human)
          Length = 185

 Score = 32.3 bits (70), Expect = 9.1
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = -3

Query: 379 FNIKSCLKYVFLLVSDRSNLLLCSFYVTNDRKY*IMFW 266
           F +   LKY+FLL SD  NLL    YV N   + +  W
Sbjct: 145 FFLGETLKYLFLLFSDDPNLLSLDAYVFNTEAHPLPIW 182


>UniRef50_Q9UKM7 Cluster: Endoplasmic reticulum
           mannosyl-oligosaccharide 1,2-alpha-mannosidase; n=36;
           Eumetazoa|Rep: Endoplasmic reticulum
           mannosyl-oligosaccharide 1,2-alpha-mannosidase - Homo
           sapiens (Human)
          Length = 699

 Score = 32.3 bits (70), Expect = 9.1
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = -3

Query: 379 FNIKSCLKYVFLLVSDRSNLLLCSFYVTNDRKY*IMFW 266
           F +   LKY+FLL SD  NLL    YV N   + +  W
Sbjct: 659 FFLGETLKYLFLLFSDDPNLLSLDAYVFNTEAHPLPIW 696


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 486,549,357
Number of Sequences: 1657284
Number of extensions: 8155507
Number of successful extensions: 14595
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14237
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14593
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 42732687689
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)