Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc7p23
         (603 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    21   8.0  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    21   8.0  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.0  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    21   8.0  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   8.0  

>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -2

Query: 518 VLSATPLPPVVN 483
           V+S+TPLPP  +
Sbjct: 155 VISSTPLPPTTS 166


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -3

Query: 250 LLGAIVVISLKVKVFQNF 197
           LLGA+  + L++K  +NF
Sbjct: 263 LLGAVYSLDLELKHIENF 280


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = -2

Query: 179  KRM*LYKYIFTRTVFALILYASLYLVTI 96
            +RM + +Y++  T+F +I   S + VTI
Sbjct: 1209 QRMVVARYVYYATIFTIITATSSF-VTI 1235


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -3

Query: 250 LLGAIVVISLKVKVFQNF 197
           LLGA+  + L++K  +NF
Sbjct: 263 LLGAVYSLDLELKHIENF 280


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -3

Query: 250 LLGAIVVISLKVKVFQNF 197
           LLGA+  + L++K  +NF
Sbjct: 583 LLGAVYSLDLELKHIENF 600


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,671
Number of Sequences: 336
Number of extensions: 2371
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15248386
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)