Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc7p10
(532 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024876-7|AAF60890.4| 211|Caenorhabditis elegans Hypothetical ... 124 3e-29
Z78416-1|CAB01682.1| 425|Caenorhabditis elegans Hypothetical pr... 31 0.52
AF293976-1|AAG17881.1| 425|Caenorhabditis elegans CAB-1 protein. 31 0.52
U97016-2|ABC71840.1| 216|Caenorhabditis elegans Hypothetical pr... 30 1.2
U97016-1|ABC71839.1| 234|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z81049-3|CAB02846.2| 631|Caenorhabditis elegans Hypothetical pr... 29 1.6
AF067947-5|AAO25993.2| 380|Caenorhabditis elegans Hypothetical ... 29 1.6
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 28 4.8
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 28 4.8
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 28 4.8
AC006649-1|ABN43084.1| 139|Caenorhabditis elegans Hypothetical ... 28 4.8
Z82078-7|CAB04947.3| 801|Caenorhabditis elegans Hypothetical pr... 27 8.4
U28993-6|AAK31498.2| 639|Caenorhabditis elegans Hypothetical pr... 27 8.4
AL033514-22|CAA22106.3| 1353|Caenorhabditis elegans Hypothetical... 27 8.4
AF497514-1|AAM33381.1| 801|Caenorhabditis elegans heavy metal t... 27 8.4
AF497513-1|AAM33380.1| 801|Caenorhabditis elegans heavy metal t... 27 8.4
AF490977-1|AAQ06435.1| 801|Caenorhabditis elegans ABC6 protein ... 27 8.4
AF316599-1|AAG38591.1| 639|Caenorhabditis elegans paracaspase p... 27 8.4
AF183401-1|AAF13189.1| 1353|Caenorhabditis elegans TIM-1 protein. 27 8.4
AF016670-5|AAB66104.1| 1193|Caenorhabditis elegans Hypothetical ... 27 8.4
>AC024876-7|AAF60890.4| 211|Caenorhabditis elegans Hypothetical
protein Y94H6A.7 protein.
Length = 211
Score = 124 bits (300), Expect = 3e-29
Identities = 56/110 (50%), Positives = 79/110 (71%)
Frame = +3
Query: 153 VQYILLRSDLLKEFGWSIGALVAQACHASSAVMHIYKDDEHTIQYLNDLDNMHKVVLEVP 332
V Y++LR DL + GW +GA+ QA HA+SA M I+++D +T Y ++LD+MHKV L V
Sbjct: 101 VMYVILRRDLQTKLGWPLGAVCTQAAHAASASMWIFRNDPNTEAYTSNLDSMHKVTLGVD 160
Query: 333 NEESLRKVAEKLKENSILHKLWIEQPENIPTCLAIKPYPKEEVKNMLANL 482
+EE ++KVA+KL ++ HK+WIE + P C+A+KPYPKEEVKN L L
Sbjct: 161 SEEEIKKVADKLTARNVDHKVWIE--DGFPVCIALKPYPKEEVKNALKGL 208
>Z78416-1|CAB01682.1| 425|Caenorhabditis elegans Hypothetical
protein C23H4.1 protein.
Length = 425
Score = 31.1 bits (67), Expect = 0.52
Identities = 19/61 (31%), Positives = 29/61 (47%)
Frame = +3
Query: 258 YKDDEHTIQYLNDLDNMHKVVLEVPNEESLRKVAEKLKENSILHKLWIEQPENIPTCLAI 437
YKDD+ ++YL + H V + PN E + + + N L +L EQ P A+
Sbjct: 107 YKDDDSYMEYLIEYMKSHPVPAQFPNFEQEAEQEHQDELNQWLEQLMNEQELLEPANAAV 166
Query: 438 K 440
K
Sbjct: 167 K 167
>AF293976-1|AAG17881.1| 425|Caenorhabditis elegans CAB-1 protein.
Length = 425
Score = 31.1 bits (67), Expect = 0.52
Identities = 19/61 (31%), Positives = 29/61 (47%)
Frame = +3
Query: 258 YKDDEHTIQYLNDLDNMHKVVLEVPNEESLRKVAEKLKENSILHKLWIEQPENIPTCLAI 437
YKDD+ ++YL + H V + PN E + + + N L +L EQ P A+
Sbjct: 107 YKDDDSYMEYLIEYMKSHPVPAQFPNFEQEAEQEHQDELNQWLEQLMNEQELLEPANAAV 166
Query: 438 K 440
K
Sbjct: 167 K 167
>U97016-2|ABC71840.1| 216|Caenorhabditis elegans Hypothetical
protein B0261.4b protein.
Length = 216
Score = 29.9 bits (64), Expect = 1.2
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = +3
Query: 201 SIGALVAQACHASSAVMHIYKDDEHTIQYLNDLDNMHKVVLEVPNEESLRKVAE--KLKE 374
S+ +LV+ A + +AV + Q+ +D N K L + AE +LK
Sbjct: 4 SLPSLVSSAVRSQNAVNTRFSSTMK--QFFDDEANFGKAELRPKHRPGRSWTAEELRLKS 61
Query: 375 NSILHKLW 398
NS LHKLW
Sbjct: 62 NSDLHKLW 69
>U97016-1|ABC71839.1| 234|Caenorhabditis elegans Hypothetical
protein B0261.4a protein.
Length = 234
Score = 29.9 bits (64), Expect = 1.2
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = +3
Query: 201 SIGALVAQACHASSAVMHIYKDDEHTIQYLNDLDNMHKVVLEVPNEESLRKVAE--KLKE 374
S+ +LV+ A + +AV + Q+ +D N K L + AE +LK
Sbjct: 22 SLPSLVSSAVRSQNAVNTRFSSTMK--QFFDDEANFGKAELRPKHRPGRSWTAEELRLKS 79
Query: 375 NSILHKLW 398
NS LHKLW
Sbjct: 80 NSDLHKLW 87
>Z81049-3|CAB02846.2| 631|Caenorhabditis elegans Hypothetical
protein C48D1.1a protein.
Length = 631
Score = 29.5 bits (63), Expect = 1.6
Identities = 23/100 (23%), Positives = 51/100 (51%), Gaps = 2/100 (2%)
Frame = +3
Query: 93 VHISTLQKAILA*NKMSNVTVQYILLRSD--LLKEFGWSIGALVAQACHASSAVMHIYKD 266
V I + +A+L N+ + +QY+ + D L+K + IG ++ H + + +HI +D
Sbjct: 106 VDIVRILEAVL--NEETRKNLQYLHIEKDQKLMKRWTAKIGNMLPSLTHLTMSDVHINED 163
Query: 267 DEHTIQYLNDLDNMHKVVLEVPNEESLRKVAEKLKENSIL 386
D + Q + N+ + + N ++ ++ +LK+ +L
Sbjct: 164 DFY--QLFGNFSNLRSLDISGTNILNIAGIS-RLKQLEVL 200
>AF067947-5|AAO25993.2| 380|Caenorhabditis elegans Hypothetical
protein T10B5.2 protein.
Length = 380
Score = 29.5 bits (63), Expect = 1.6
Identities = 26/121 (21%), Positives = 53/121 (43%), Gaps = 8/121 (6%)
Frame = +3
Query: 156 QYILLRSDLLKEFGWSIGALVAQACHASSAVMHIYKDDEHTIQYLNDL-----DNMHKVV 320
QY+ L+ L + W +G LV + +H+ + + I L+ + +N VV
Sbjct: 210 QYLNLQYILTPQLHWDLGFLVQNTTLDLYSAVHLIQQTFYCISDLHKVCLHQRNNTSIVV 269
Query: 321 L-EVPNEESLRKVAEKL--KENSILHKLWIEQPENIPTCLAIKPYPKEEVKNMLANLNYI 491
L N E+ + + + +++ L L+++Q + L +P PK + L+ +
Sbjct: 270 LNNFFNSETRQNIRRNICTTKHNGLQPLYVQQARHARNKLEREPLPKNVINTYLSRRQHF 329
Query: 492 R 494
R
Sbjct: 330 R 330
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 27.9 bits (59), Expect = 4.8
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +3
Query: 333 NEESLRKVAEKLKENSILHKLWIEQPENIPTCLAIKPYPKEEVKNMLANLNYIRT 497
NEESLR EKLK S L ++ + +K K+++ + L +LN ++T
Sbjct: 2078 NEESLRSQLEKLKNESSLSN--VDNSNAVKIVEELKK-EKKDLTDRLGHLNELKT 2129
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 27.9 bits (59), Expect = 4.8
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +3
Query: 333 NEESLRKVAEKLKENSILHKLWIEQPENIPTCLAIKPYPKEEVKNMLANLNYIRT 497
NEESLR EKLK S L ++ + +K K+++ + L +LN ++T
Sbjct: 2078 NEESLRSQLEKLKNESSLSN--VDNSNAVKIVEELKK-EKKDLTDRLGHLNELKT 2129
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 27.9 bits (59), Expect = 4.8
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +3
Query: 333 NEESLRKVAEKLKENSILHKLWIEQPENIPTCLAIKPYPKEEVKNMLANLNYIRT 497
NEESLR EKLK S L ++ + +K K+++ + L +LN ++T
Sbjct: 2078 NEESLRSQLEKLKNESSLSN--VDNSNAVKIVEELKK-EKKDLTDRLGHLNELKT 2129
>AC006649-1|ABN43084.1| 139|Caenorhabditis elegans Hypothetical
protein H01M10.3 protein.
Length = 139
Score = 27.9 bits (59), Expect = 4.8
Identities = 16/55 (29%), Positives = 33/55 (60%)
Frame = -1
Query: 229 HA*ATRAPIDQPNSFNKSLRSNIYCTVTFDILFYANIAF*SVEI*TKKSSIIMHL 65
HA T ++ +SFN +L +++Y + TFD++ +++ TKKS++I ++
Sbjct: 95 HA-CTENRVEAWDSFNVTLETSMYLSATFDVI---------IDLDTKKSTVIKNI 139
>Z82078-7|CAB04947.3| 801|Caenorhabditis elegans Hypothetical
protein W09D6.6 protein.
Length = 801
Score = 27.1 bits (57), Expect = 8.4
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -1
Query: 343 DSSFGTSKTTLC-ILSKSFKYCIVCSSSLYMCIT 245
D + TSK T+ ILS + ++C S Y C T
Sbjct: 60 DDASSTSKLTISKILSICTIFAVICQSIFYFCFT 93
>U28993-6|AAK31498.2| 639|Caenorhabditis elegans Hypothetical
protein F22D3.6 protein.
Length = 639
Score = 27.1 bits (57), Expect = 8.4
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +3
Query: 360 EKLKENSILHKLWIEQPENIPTCLAIKPYPKEE 458
E+L EN++ H+ ++E PE + C ++ Y +E
Sbjct: 552 EELSENALNHRAFVEFPEEL-HCSDVREYNDDE 583
>AL033514-22|CAA22106.3| 1353|Caenorhabditis elegans Hypothetical
protein Y75B8A.22 protein.
Length = 1353
Score = 27.1 bits (57), Expect = 8.4
Identities = 18/78 (23%), Positives = 37/78 (47%)
Frame = +3
Query: 270 EHTIQYLNDLDNMHKVVLEVPNEESLRKVAEKLKENSILHKLWIEQPENIPTCLAIKPYP 449
++ + N+L +H+ + E EE+ RK A++ E H + +E+ +P + IK +
Sbjct: 434 QYALGAYNELVLLHRYIYEHAKEENERKFAKRALE----HIVNVEEYRELPIFI-IKKFS 488
Query: 450 KEEVKNMLANLNYIRTHY 503
+ N + TH+
Sbjct: 489 SSVLSNNFLRELVLTTHH 506
>AF497514-1|AAM33381.1| 801|Caenorhabditis elegans heavy metal
tolerance factor 1 protein.
Length = 801
Score = 27.1 bits (57), Expect = 8.4
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -1
Query: 343 DSSFGTSKTTLC-ILSKSFKYCIVCSSSLYMCIT 245
D + TSK T+ ILS + ++C S Y C T
Sbjct: 60 DDASSTSKLTISKILSICTIFAVICQSIFYFCFT 93
>AF497513-1|AAM33380.1| 801|Caenorhabditis elegans heavy metal
tolerance factor 1 protein.
Length = 801
Score = 27.1 bits (57), Expect = 8.4
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -1
Query: 343 DSSFGTSKTTLC-ILSKSFKYCIVCSSSLYMCIT 245
D + TSK T+ ILS + ++C S Y C T
Sbjct: 60 DDASSTSKLTISKILSICTIFAVICQSIFYFCFT 93
>AF490977-1|AAQ06435.1| 801|Caenorhabditis elegans ABC6 protein
protein.
Length = 801
Score = 27.1 bits (57), Expect = 8.4
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -1
Query: 343 DSSFGTSKTTLC-ILSKSFKYCIVCSSSLYMCIT 245
D + TSK T+ ILS + ++C S Y C T
Sbjct: 60 DDASSTSKLTISKILSICTIFAVICQSIFYFCFT 93
>AF316599-1|AAG38591.1| 639|Caenorhabditis elegans paracaspase
protein.
Length = 639
Score = 27.1 bits (57), Expect = 8.4
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +3
Query: 360 EKLKENSILHKLWIEQPENIPTCLAIKPYPKEE 458
E+L EN++ H+ ++E PE + C ++ Y +E
Sbjct: 552 EELSENALNHRAFVEFPEEL-HCSDVREYNDDE 583
>AF183401-1|AAF13189.1| 1353|Caenorhabditis elegans TIM-1 protein.
Length = 1353
Score = 27.1 bits (57), Expect = 8.4
Identities = 18/78 (23%), Positives = 37/78 (47%)
Frame = +3
Query: 270 EHTIQYLNDLDNMHKVVLEVPNEESLRKVAEKLKENSILHKLWIEQPENIPTCLAIKPYP 449
++ + N+L +H+ + E EE+ RK A++ E H + +E+ +P + IK +
Sbjct: 434 QYALGAYNELVLLHRYIYEHAKEENERKFAKRALE----HIVNVEEYRELPIFI-IKKFS 488
Query: 450 KEEVKNMLANLNYIRTHY 503
+ N + TH+
Sbjct: 489 SSVLSNNFLRELVLTTHH 506
>AF016670-5|AAB66104.1| 1193|Caenorhabditis elegans Hypothetical
protein K02F6.4 protein.
Length = 1193
Score = 27.1 bits (57), Expect = 8.4
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +3
Query: 276 TIQYLNDLDNMHKVVLEVPNEESLRKVAEKLKENSILHKLWIEQPENI 419
T +LN L N+ V ++ NE L+K+A K + I+ K ++ E +
Sbjct: 294 TSGFLNGLGNVQAVKKDLNNEWFLKKIARNDKSSLIVLKQYLRFFETV 341
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,615,579
Number of Sequences: 27780
Number of extensions: 237594
Number of successful extensions: 742
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 741
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1049512662
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -