Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc7p09
         (503 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y11119-1|CAA72004.1|  120|Drosophila melanogaster S20 ribosomal ...   201   4e-52
AY071742-1|AAL49364.1|  120|Drosophila melanogaster RH47995p pro...   201   4e-52
AE014297-2870|AAF55809.1|  120|Drosophila melanogaster CG15693-P...   201   4e-52
AY071353-1|AAL48975.1|  120|Drosophila melanogaster RE38972p pro...   196   1e-50
BT022291-1|AAY54707.1|  336|Drosophila melanogaster IP08195p pro...    28   8.3  
AE014296-1731|AAF50208.2|  213|Drosophila melanogaster CG32044-P...    28   8.3  

>Y11119-1|CAA72004.1|  120|Drosophila melanogaster S20 ribosomal
           protein protein.
          Length = 120

 Score =  201 bits (491), Expect = 4e-52
 Identities = 97/115 (84%), Positives = 103/115 (89%), Gaps = 1/115 (0%)
 Frame = +2

Query: 125 KDIEKPQA-EVSPIHRIRITLTSRNVRSLEKVCADLIXGAKKQKLRVKGPVRMPTKILRI 301
           KDIEKP   + + +HRIRITLTSRNVRSLE VC DLI GAK Q LRVKGPVRMPTK LRI
Sbjct: 6   KDIEKPHVGDSASVHRIRITLTSRNVRSLENVCRDLINGAKNQNLRVKGPVRMPTKTLRI 65

Query: 302 TTRKTPCGEGSKTWDRFQMXIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIAD 466
           TTRKTPCGEGSKTWDRFQM IHKR+IDLHSPSEIVK+ITSINIEPGVEVEVTIA+
Sbjct: 66  TTRKTPCGEGSKTWDRFQMRIHKRIIDLHSPSEIVKKITSINIEPGVEVEVTIAN 120


>AY071742-1|AAL49364.1|  120|Drosophila melanogaster RH47995p
           protein.
          Length = 120

 Score =  201 bits (491), Expect = 4e-52
 Identities = 97/115 (84%), Positives = 103/115 (89%), Gaps = 1/115 (0%)
 Frame = +2

Query: 125 KDIEKPQA-EVSPIHRIRITLTSRNVRSLEKVCADLIXGAKKQKLRVKGPVRMPTKILRI 301
           KDIEKP   + + +HRIRITLTSRNVRSLE VC DLI GAK Q LRVKGPVRMPTK LRI
Sbjct: 6   KDIEKPHVGDSASVHRIRITLTSRNVRSLENVCRDLINGAKNQNLRVKGPVRMPTKTLRI 65

Query: 302 TTRKTPCGEGSKTWDRFQMXIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIAD 466
           TTRKTPCGEGSKTWDRFQM IHKR+IDLHSPSEIVK+ITSINIEPGVEVEVTIA+
Sbjct: 66  TTRKTPCGEGSKTWDRFQMRIHKRIIDLHSPSEIVKKITSINIEPGVEVEVTIAN 120


>AE014297-2870|AAF55809.1|  120|Drosophila melanogaster CG15693-PA
           protein.
          Length = 120

 Score =  201 bits (491), Expect = 4e-52
 Identities = 97/115 (84%), Positives = 103/115 (89%), Gaps = 1/115 (0%)
 Frame = +2

Query: 125 KDIEKPQA-EVSPIHRIRITLTSRNVRSLEKVCADLIXGAKKQKLRVKGPVRMPTKILRI 301
           KDIEKP   + + +HRIRITLTSRNVRSLE VC DLI GAK Q LRVKGPVRMPTK LRI
Sbjct: 6   KDIEKPHVGDSASVHRIRITLTSRNVRSLENVCRDLINGAKNQNLRVKGPVRMPTKTLRI 65

Query: 302 TTRKTPCGEGSKTWDRFQMXIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIAD 466
           TTRKTPCGEGSKTWDRFQM IHKR+IDLHSPSEIVK+ITSINIEPGVEVEVTIA+
Sbjct: 66  TTRKTPCGEGSKTWDRFQMRIHKRIIDLHSPSEIVKKITSINIEPGVEVEVTIAN 120


>AY071353-1|AAL48975.1|  120|Drosophila melanogaster RE38972p
           protein.
          Length = 120

 Score =  196 bits (479), Expect = 1e-50
 Identities = 95/115 (82%), Positives = 102/115 (88%), Gaps = 1/115 (0%)
 Frame = +2

Query: 125 KDIEKPQA-EVSPIHRIRITLTSRNVRSLEKVCADLIXGAKKQKLRVKGPVRMPTKILRI 301
           KDIEKP   + + +H IRITLTSRNVRSLE VC DLI GAK Q LRV+GPVRMPTK LRI
Sbjct: 6   KDIEKPHVGDSASVHCIRITLTSRNVRSLENVCRDLINGAKNQNLRVEGPVRMPTKTLRI 65

Query: 302 TTRKTPCGEGSKTWDRFQMXIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIAD 466
           TTRKTPCGEGSKTWDRFQM IHKR+IDLHSPSEIVK+ITSINIEPGVEVEVTIA+
Sbjct: 66  TTRKTPCGEGSKTWDRFQMRIHKRIIDLHSPSEIVKKITSINIEPGVEVEVTIAN 120


>BT022291-1|AAY54707.1|  336|Drosophila melanogaster IP08195p
           protein.
          Length = 336

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 22/69 (31%), Positives = 27/69 (39%), Gaps = 4/69 (5%)
 Frame = +1

Query: 109 RCSVRQRH*ETPGRGLPYPPHQDHSYFTQCALAREGLC*P-NXWSQET---EAACKGPSP 276
           +C  RQ     P   L  P  Q H      AL+ E L      W Q T   E    GPS 
Sbjct: 3   KCVSRQ---SAPLHELASPDAQHHQSVLTIALSHEDLAQALKIWQQLTGSNEYIAAGPSS 59

Query: 277 HANQDPAYH 303
           H  ++P Y+
Sbjct: 60  HQEEEPFYY 68


>AE014296-1731|AAF50208.2|  213|Drosophila melanogaster CG32044-PA
           protein.
          Length = 213

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 22/69 (31%), Positives = 27/69 (39%), Gaps = 4/69 (5%)
 Frame = +1

Query: 109 RCSVRQRH*ETPGRGLPYPPHQDHSYFTQCALAREGLC*P-NXWSQET---EAACKGPSP 276
           +C  RQ     P   L  P  Q H      AL+ E L      W Q T   E    GPS 
Sbjct: 38  KCVSRQ---SAPLHELASPDAQHHQSVLTIALSHEDLAQALKIWQQLTGSNEYIAAGPSS 94

Query: 277 HANQDPAYH 303
           H  ++P Y+
Sbjct: 95  HQEEEPFYY 103


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,530,770
Number of Sequences: 53049
Number of extensions: 495311
Number of successful extensions: 1157
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1079
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1157
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1804766976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)