Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc7p07
         (696 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    23   3.2  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    23   3.2  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    23   3.2  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    23   3.2  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    23   3.2  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    23   3.2  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           23   3.2  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    23   3.2  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    22   5.5  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   9.6  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +2

Query: 617 LIAIRCRTLVPNATCSYFCHQQQR 688
           +IA    TL+   T +Y+ H+Q+R
Sbjct: 385 IIAPLIATLIATVTVNYYRHKQKR 408


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -3

Query: 472 LMQQTSESRIRAVMTASMRMIAPVFSTSTSRNISKA 365
           L   TS     A  TAS  + +P  STS++ +  KA
Sbjct: 147 LSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKA 182


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -3

Query: 472 LMQQTSESRIRAVMTASMRMIAPVFSTSTSRNISKA 365
           L   TS     A  TAS  + +P  STS++ +  KA
Sbjct: 147 LSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKA 182


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -3

Query: 472 LMQQTSESRIRAVMTASMRMIAPVFSTSTSRNISKA 365
           L   TS     A  TAS  + +P  STS++ +  KA
Sbjct: 147 LSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKA 182


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -3

Query: 472 LMQQTSESRIRAVMTASMRMIAPVFSTSTSRNISKA 365
           L   TS     A  TAS  + +P  STS++ +  KA
Sbjct: 147 LSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKA 182


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -3

Query: 472 LMQQTSESRIRAVMTASMRMIAPVFSTSTSRNISKA 365
           L   TS     A  TAS  + +P  STS++ +  KA
Sbjct: 103 LSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKA 138


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -3

Query: 472 LMQQTSESRIRAVMTASMRMIAPVFSTSTSRNISKA 365
           L   TS     A  TAS  + +P  STS++ +  KA
Sbjct: 147 LSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKA 182


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -3

Query: 472 LMQQTSESRIRAVMTASMRMIAPVFSTSTSRNISKA 365
           L   TS     A  TAS  + +P  STS++ +  KA
Sbjct: 147 LSVSTSPPGKPATSTASQNLSSPASSTSSTSSTEKA 182


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/29 (34%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = +1

Query: 142 IVGYN*S-DFCLGYIVYIFFNSKVRVLII 225
           I GY  + +F + YI++  FN+   +L+I
Sbjct: 247 IAGYEFNANFTISYILFALFNTFGTILLI 275


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = +2

Query: 26  RTDVHIVAQSLYFIIQSYYCQSLVVVKI 109
           R ++HI    ++F   S YC +  V+ +
Sbjct: 58  RNEIHIKIVLMFFKEASLYCFNYYVIVV 85


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,822
Number of Sequences: 336
Number of extensions: 2399
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)