Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc7p01
         (725 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    25   0.62 
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   3.3  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   4.4  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   5.8  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    21   7.7  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    21   7.7  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    21   7.7  

>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 25.0 bits (52), Expect = 0.62
 Identities = 13/54 (24%), Positives = 25/54 (46%)
 Frame = +1

Query: 223 ISYFTSGLLLNFVQAILYFGLKPFNKKLYRQINYYLSYSFYSQLVFMAEWWAGS 384
           ++YF   ++L  V       L PF     R IN+  ++   + ++ MA  + G+
Sbjct: 43  VAYFVIFIILTIVFFEKRSALSPFELIQIRTINFVATFRTIANIILMAVLFLGT 96


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -3

Query: 297 VERFKSKV*NRLYKVQQQSRCEIRNSE 217
           VE  K+ V +R YK+Q+Q     RNS+
Sbjct: 694 VEEAKTFV-DRCYKMQEQFTLNFRNSD 719


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 15/46 (32%), Positives = 19/46 (41%)
 Frame = +1

Query: 232 FTSGLLLNFVQAILYFGLKPFNKKLYRQINYYLSYSFYSQLVFMAE 369
           FTS  +   +  I+       N  L    N  L    YSQLVFM +
Sbjct: 181 FTSTCIYTNLLRIIEADFSKLNHLLSGTENLDLVLPIYSQLVFMCK 226


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -2

Query: 442 HVLFHKTFRIHLFLHITTWL 383
           H LFH    ++L +H+ T L
Sbjct: 672 HFLFHIVIGMNLIIHVGTQL 691


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 10/33 (30%), Positives = 19/33 (57%), Gaps = 5/33 (15%)
 Frame = +3

Query: 87  IDNWKS-----LAYGPRIRGFMTASVNYEKKQN 170
           I+NW S     +A+G   +GF+  ++ Y+  Q+
Sbjct: 400 IENWWSDGNQQIAFGRGNKGFVAFTIGYDLNQH 432


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 10/33 (30%), Positives = 19/33 (57%), Gaps = 5/33 (15%)
 Frame = +3

Query: 87  IDNWKS-----LAYGPRIRGFMTASVNYEKKQN 170
           I+NW S     +A+G   +GF+  ++ Y+  Q+
Sbjct: 401 IENWWSDGNQQIAFGRGNKGFVAFTIGYDLNQH 433


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 10/33 (30%), Positives = 19/33 (57%), Gaps = 5/33 (15%)
 Frame = +3

Query: 87  IDNWKS-----LAYGPRIRGFMTASVNYEKKQN 170
           I+NW S     +A+G   +GF+  ++ Y+  Q+
Sbjct: 401 IENWWSDGNQQIAFGRGNKGFVAFTIGYDLNQH 433


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,202
Number of Sequences: 336
Number of extensions: 3679
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)