Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc7p01
(725 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC428.14 |||1-acylglycerol-3-phosphate acyltransferase |Schizo... 61 1e-10
SPAC1851.02 |||1-acylglycerol-3-phosphate O-acyltransferase|Schi... 44 2e-05
SPBC776.12c |hsk1||serine/threonine protein kinase Hsk1|Schizosa... 27 2.7
SPCC417.10 |||membrane transporter|Schizosaccharomyces pombe|chr... 27 3.6
SPAC2F3.16 |||ubiquitin-protein ligase E3 |Schizosaccharomyces p... 26 6.3
SPBC336.01 |fbh1|fdh1, fdh|DNA helicase I|Schizosaccharomyces po... 26 6.3
SPCC1840.08c |||protein disulfide isomerase |Schizosaccharomyces... 25 8.3
SPBC23G7.08c |rga7||GTPase activating protein Rga7|Schizosacchar... 25 8.3
SPAC323.07c |||MatE family transporter|Schizosaccharomyces pombe... 25 8.3
>SPBC428.14 |||1-acylglycerol-3-phosphate acyltransferase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 350
Score = 61.3 bits (142), Expect = 1e-10
Identities = 30/96 (31%), Positives = 47/96 (48%)
Frame = +1
Query: 436 EHGYLIMNHSYEIDWLMGWQFCDGIGVLGNCKAYAKKSIQYLPPIGWMWKFSEFVFLERS 615
E +I NH DW+ W G+ K S+++LP IGW + F+FL R
Sbjct: 94 ERNIVIANHQLYSDWMYVWWLSYTAKQHGHVYIMLKNSLKWLPVIGWGMQLFRFIFLSRK 153
Query: 616 FEKDKEIIKKQISELCDYPDPVWLLLTPEGTRYTKT 723
++KD E + + + + D V L+L PEGT ++
Sbjct: 154 WDKDYETMSRHFKFIRNVRDSVSLILFPEGTNLVES 189
>SPAC1851.02 |||1-acylglycerol-3-phosphate
O-acyltransferase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 279
Score = 44.4 bits (100), Expect = 2e-05
Identities = 37/123 (30%), Positives = 59/123 (47%), Gaps = 3/123 (2%)
Frame = +1
Query: 352 LVFMAEWWAGSTMSLYVKKDEYEKFYGK-EHGYLIMNHSYEIDWL-MGWQFCDGIGVLGN 525
L A + ST+ + K E E+ K + L++NH E+D L +G F V+
Sbjct: 70 LTAKAYYGLASTILDFRFKIENEEILRKHKSAVLVVNHQSELDILAIGRTFGPNYSVI-- 127
Query: 526 CKAYAKKSIQYLPPIGWMWKFSEFVFLERSFEKDK-EIIKKQISELCDYPDPVWLLLTPE 702
AKKS++Y+P +GW S+ VF++RS D ++ K + +W+ E
Sbjct: 128 ----AKKSLRYVPILGWFMILSDVVFIDRSRRSDAIQLFAKAARRMRKENISIWVF--AE 181
Query: 703 GTR 711
GTR
Sbjct: 182 GTR 184
>SPBC776.12c |hsk1||serine/threonine protein kinase
Hsk1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 507
Score = 27.1 bits (57), Expect = 2.7
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +1
Query: 601 FLERSFEKDKEIIKKQISELCDYPD 675
F E SFEKD+++ K +S + D+ +
Sbjct: 453 FGETSFEKDEDLTAKHLSHILDFKE 477
>SPCC417.10 |||membrane transporter|Schizosaccharomyces pombe|chr
3|||Manual
Length = 508
Score = 26.6 bits (56), Expect = 3.6
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = +1
Query: 490 WQFCDGIG-VLGNCKAYAKKSIQYLPPIGW 576
W +G+G +LG+C AY LP GW
Sbjct: 193 WVAFNGLGQILGSCMAYGLAKRTSLPMRGW 222
>SPAC2F3.16 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 425
Score = 25.8 bits (54), Expect = 6.3
Identities = 10/28 (35%), Positives = 12/28 (42%)
Frame = -1
Query: 269 IACTKFNSNPDVKYEIAKHRCTIVDCFN 186
I C NS D KY H+C +N
Sbjct: 346 IRCNDCNSRCDTKYHFLGHKCNSCHSYN 373
>SPBC336.01 |fbh1|fdh1, fdh|DNA helicase I|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 878
Score = 25.8 bits (54), Expect = 6.3
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = -2
Query: 499 RIAIPSTNLFHNCGS*LNIHVLFHKTFRIHLFLHITTW 386
++A P N +N G+ V H F ++ F+H T W
Sbjct: 378 QVAFPKANRKNNPGTPSASLVASHIMFTLNRFMHSTDW 415
>SPCC1840.08c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 561
Score = 25.4 bits (53), Expect = 8.3
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -1
Query: 641 LIISLSFSKDLSRNTNSENFHIQPIGGRYWIDF 543
L++S SF + NTNS N + IG IDF
Sbjct: 74 LLVS-SFKERKLLNTNSANLRLNSIGSYEMIDF 105
>SPBC23G7.08c |rga7||GTPase activating protein
Rga7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 25.4 bits (53), Expect = 8.3
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = -3
Query: 288 FKSKV*NRLYKVQQQSRCEIRNSETQMHDR 199
FK K +L K++ ++R + N+E+ MH +
Sbjct: 198 FKPKSNAQLTKLEDEARLKAENAESDMHSK 227
>SPAC323.07c |||MatE family transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 25.4 bits (53), Expect = 8.3
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = +1
Query: 292 FNKKLYRQINYYLSYSFYSQLVFMAEWWAGSTMSL 396
F+++ + ++ L +SF+ L+ + EW A SL
Sbjct: 305 FSRQALKNLSPMLHFSFHGMLMIVTEWAAYEMTSL 339
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,932,726
Number of Sequences: 5004
Number of extensions: 60102
Number of successful extensions: 152
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 151
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 341222980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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