Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc7o16
(521 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein pr... 23 2.2
AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like prote... 21 5.0
AM292330-1|CAL23142.2| 408|Tribolium castaneum gustatory recept... 21 5.0
AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface pro... 21 5.0
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 21 6.6
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 21 6.6
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 21 6.6
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 21 6.6
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 21 6.6
AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory recept... 21 6.6
AM292378-1|CAL23190.2| 387|Tribolium castaneum gustatory recept... 21 6.6
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 8.7
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 8.7
>AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein
protein.
Length = 392
Score = 22.6 bits (46), Expect = 2.2
Identities = 9/36 (25%), Positives = 17/36 (47%)
Frame = +1
Query: 166 QNNDIDNACRLINRIMGKEGLLAQYRLTRYYEKPFQ 273
++N N CR+ + + L + T EKP++
Sbjct: 244 EDNQKPNVCRICGKSYARPSTLKTHLRTHSGEKPYR 279
>AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like protein
protein.
Length = 314
Score = 21.4 bits (43), Expect = 5.0
Identities = 8/32 (25%), Positives = 17/32 (53%)
Frame = +1
Query: 184 NACRLINRIMGKEGLLAQYRLTRYYEKPFQTR 279
N C + +R++ + L + T E+PF+ +
Sbjct: 135 NQCVICHRVLSCKSALQMHYRTHTGERPFKCK 166
>AM292330-1|CAL23142.2| 408|Tribolium castaneum gustatory receptor
candidate 9 protein.
Length = 408
Score = 21.4 bits (43), Expect = 5.0
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = -2
Query: 418 NLLFTFD--LSFSNILERVHVYFFLIQIVFFSPYLH 317
+L F D LS+ + ++ ++F+I VF S YLH
Sbjct: 276 HLCFLLDEKLSYIILTSFLNNFYFIIFQVFESFYLH 311
>AF322227-1|AAK01654.1| 782|Tribolium castaneum cell surface
protein chaoptin protein.
Length = 782
Score = 21.4 bits (43), Expect = 5.0
Identities = 10/37 (27%), Positives = 17/37 (45%)
Frame = -2
Query: 430 MSGYNLLFTFDLSFSNILERVHVYFFLIQIVFFSPYL 320
+ G + DLSF+NI +F +++ YL
Sbjct: 219 LGGLQNIKVLDLSFNNITSVAKQFFRPVELSLMQLYL 255
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 21.0 bits (42), Expect = 6.6
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +2
Query: 35 DLRFCNTIRIESLEFFYPITVKCI 106
D+ F IR +L +F+ + V C+
Sbjct: 200 DVTFTIKIRRRTLYYFFNLIVPCV 223
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 21.0 bits (42), Expect = 6.6
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +2
Query: 35 DLRFCNTIRIESLEFFYPITVKCI 106
D+ F IR +L +F+ + V C+
Sbjct: 200 DVTFTIKIRRRTLYYFFNLIVPCV 223
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 21.0 bits (42), Expect = 6.6
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +2
Query: 35 DLRFCNTIRIESLEFFYPITVKCI 106
D+ F IR +L +F+ + V C+
Sbjct: 200 DVTFTIKIRRRTLYYFFNLIVPCV 223
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 21.0 bits (42), Expect = 6.6
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +2
Query: 35 DLRFCNTIRIESLEFFYPITVKCI 106
D+ F IR +L +F+ + V C+
Sbjct: 200 DVTFTIKIRRRTLYYFFNLIVPCV 223
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 21.0 bits (42), Expect = 6.6
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +2
Query: 35 DLRFCNTIRIESLEFFYPITVKCI 106
D+ F IR +L +F+ + V C+
Sbjct: 200 DVTFTIKIRRRTLYYFFNLIVPCV 223
>AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory receptor
candidate 59 protein.
Length = 489
Score = 21.0 bits (42), Expect = 6.6
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = -3
Query: 348 YKLYFSLHIFIVDGLTFFMVNSTSSLK 268
YK+Y + + LT +MV T++L+
Sbjct: 40 YKIYKYTYNIVAVSLTAYMVYITTNLR 66
>AM292378-1|CAL23190.2| 387|Tribolium castaneum gustatory receptor
candidate 57 protein.
Length = 387
Score = 21.0 bits (42), Expect = 6.6
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -3
Query: 348 YKLYFSLHIFIVDGL 304
+KLY +HIFI+ L
Sbjct: 25 FKLYTIVHIFIIIAL 39
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 20.6 bits (41), Expect = 8.7
Identities = 5/8 (62%), Positives = 7/8 (87%)
Frame = -2
Query: 325 YLHCRWPY 302
YLH +WP+
Sbjct: 1292 YLHIKWPF 1299
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 20.6 bits (41), Expect = 8.7
Identities = 5/8 (62%), Positives = 7/8 (87%)
Frame = -2
Query: 325 YLHCRWPY 302
YLH +WP+
Sbjct: 1292 YLHIKWPF 1299
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,652
Number of Sequences: 336
Number of extensions: 2747
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -