Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc7o15
(692 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 129 3e-32
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 36 3e-04
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 36 3e-04
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 36 3e-04
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 36 3e-04
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 36 5e-04
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 23 3.6
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 21 8.4
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 129 bits (311), Expect = 3e-32
Identities = 64/72 (88%), Positives = 69/72 (95%)
Frame = +3
Query: 141 TTQSNLHQQDLSKLDVTKLSALSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRF 320
T Q NL++QDLSKLDV+KL+ALS EVISRQATINIGTIGHVAHGKST+VKAISGVQTVRF
Sbjct: 11 TGQPNLYKQDLSKLDVSKLTALSREVISRQATINIGTIGHVAHGKSTIVKAISGVQTVRF 70
Query: 321 KNELERNITIKL 356
KNELERNITIKL
Sbjct: 71 KNELERNITIKL 82
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 36.3 bits (80), Expect = 3e-04
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 6/71 (8%)
Frame = +3
Query: 498 HVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNES------CPQPQTSEHLAAIEIMKL 659
+V+ +D PGH + M+ G + D A+L++A QT EH + +
Sbjct: 13 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 72
Query: 660 KHILILQNKID 692
K +++ NK+D
Sbjct: 73 KQLIVGVNKMD 83
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 36.3 bits (80), Expect = 3e-04
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 6/71 (8%)
Frame = +3
Query: 498 HVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNES------CPQPQTSEHLAAIEIMKL 659
+V+ +D PGH + M+ G + D A+L++A QT EH + +
Sbjct: 29 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 88
Query: 660 KHILILQNKID 692
K +++ NK+D
Sbjct: 89 KQLIVGVNKMD 99
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 36.3 bits (80), Expect = 3e-04
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Frame = +3
Query: 471 CTGRFQLV----RHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNESCPQPQTSEHLA 638
C G F + V+F+D PGH ++ GA + D +L++A ++ + QT + +
Sbjct: 181 CIGAFDVTLESGERVTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDGVKE-QTLQSIE 239
Query: 639 AIEIMKLKHILILQNKID 692
+ K+ I++ NKID
Sbjct: 240 MAKDAKVP-IIVAINKID 256
Score = 26.2 bits (55), Expect = 0.30
Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +3
Query: 162 QQDLSKLDVTKLSALSP-EVISRQATINIGTIGHVAHGKSTVVKAI 296
++ + D+TK + ++I R + I +GHV HGK+T++ A+
Sbjct: 122 KKTMENKDITKRPLPNESQLIKRHPIVTI--MGHVDHGKTTLLDAL 165
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 36.3 bits (80), Expect = 3e-04
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 6/71 (8%)
Frame = +3
Query: 498 HVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNES------CPQPQTSEHLAAIEIMKL 659
+V+ +D PGH + M+ G + D A+L++A QT EH + +
Sbjct: 86 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 145
Query: 660 KHILILQNKID 692
K +++ NK+D
Sbjct: 146 KQLIVGVNKMD 156
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 35.5 bits (78), Expect = 5e-04
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 6/71 (8%)
Frame = +3
Query: 498 HVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNES------CPQPQTSEHLAAIEIMKL 659
+V+ +D PGH + M+ G + D A+L++A QT EH + +
Sbjct: 86 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGIGEFEAGISKNGQTREHALLAFTLGV 145
Query: 660 KHILILQNKID 692
K +++ NK+D
Sbjct: 146 KQLIVGVNKMD 156
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 22.6 bits (46), Expect = 3.6
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +1
Query: 166 KTYLNWMSQNYLLSLPKSYQ 225
+ Y NW +Q+ + S+ K Y+
Sbjct: 837 RPYWNWSNQDVIKSIEKGYR 856
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR
protein.
Length = 381
Score = 21.4 bits (43), Expect = 8.4
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -2
Query: 349 IVIFLSNSFLNLTVCT 302
++IF++ F N+T CT
Sbjct: 48 MIIFVTGIFGNITTCT 63
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,106
Number of Sequences: 438
Number of extensions: 3830
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21195810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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