Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc7o13
         (553 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99281-56|CAB16513.1|  131|Caenorhabditis elegans Hypothetical p...    75   5e-14
U10402-9|AAA19065.1|  892|Caenorhabditis elegans Gro-1 operon ge...    32   0.24 
AY052769-1|AAL14108.1|  885|Caenorhabditis elegans GOP-1 protein.      32   0.24 
Z82076-2|CAB04938.1|  360|Caenorhabditis elegans Hypothetical pr...    31   0.73 
Z70207-8|CAM33501.1|  835|Caenorhabditis elegans Hypothetical pr...    29   2.2  
Z70207-5|CAA94127.2|  914|Caenorhabditis elegans Hypothetical pr...    29   2.2  
AF316542-1|AAG50270.1|  914|Caenorhabditis elegans serine/threon...    29   2.2  
AF002198-8|AAF99931.2|  300|Caenorhabditis elegans Serpentine re...    27   6.8  
AC024801-12|AAF59643.4|  569|Caenorhabditis elegans Hypothetical...    27   6.8  

>Z99281-56|CAB16513.1|  131|Caenorhabditis elegans Hypothetical
           protein Y57G11C.12b protein.
          Length = 131

 Score = 74.5 bits (175), Expect = 5e-14
 Identities = 45/131 (34%), Positives = 69/131 (52%), Gaps = 5/131 (3%)
 Frame = +3

Query: 93  LKMSARQAIKVG---TKTVKPVLSSSHAEARNRVLSLYKAWYRQIPYIVKDYDIPKSEAQ 263
           +  +A + ++ G    +TV P+ S++ AEAR  VL+ YK + R  P    D+ +      
Sbjct: 1   MSATAGRVVRAGQHAVRTVAPIKSNNSAEARMSVLAAYKEFQRLTPKFWWDFGLHDMPLG 60

Query: 264 C-REKLKELFIKNKHVTDIRVIDMLVIKGQMELKESVNIWKQKGHIMAY-FKPTEEPKPK 437
             R  +K+ F KN H+TD+RV+D LV +    +K     +    H+  Y F    E KPK
Sbjct: 61  VFRAVIKKQFTKNGHLTDVRVVDRLVGETHQHMKSIRYAFYNPDHVRNYLFAENVEAKPK 120

Query: 438 NFLSKFFSGNE 470
           +FLSKF +G E
Sbjct: 121 DFLSKFLNGKE 131


>U10402-9|AAA19065.1|  892|Caenorhabditis elegans Gro-1 operon gene
           protein 1 protein.
          Length = 892

 Score = 32.3 bits (70), Expect = 0.24
 Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
 Frame = -3

Query: 389 LLFPYVHRLFQLHLTLNNQHINDSNISHMFVL-NEE----FFQFLSTLCF*LGNVIILHY 225
           +LF  +     L+  L+N H+N S ISH F L N+E    +  FL TL F L    I  +
Sbjct: 99  ILFENIRHETSLYFLLSNNHVN-SIISHKFDLQNDEIMAYYISFLKTLSFKLNPATIHFF 157

Query: 224 IGDLT 210
             + T
Sbjct: 158 FNETT 162


>AY052769-1|AAL14108.1|  885|Caenorhabditis elegans GOP-1 protein.
          Length = 885

 Score = 32.3 bits (70), Expect = 0.24
 Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
 Frame = -3

Query: 389 LLFPYVHRLFQLHLTLNNQHINDSNISHMFVL-NEE----FFQFLSTLCF*LGNVIILHY 225
           +LF  +     L+  L+N H+N S ISH F L N+E    +  FL TL F L    I  +
Sbjct: 92  ILFENIRHETSLYFLLSNNHVN-SIISHKFDLQNDEIMAYYISFLKTLSFKLNPATIHFF 150

Query: 224 IGDLT 210
             + T
Sbjct: 151 FNETT 155


>Z82076-2|CAB04938.1|  360|Caenorhabditis elegans Hypothetical
           protein W07G1.6 protein.
          Length = 360

 Score = 30.7 bits (66), Expect = 0.73
 Identities = 29/110 (26%), Positives = 46/110 (41%), Gaps = 6/110 (5%)
 Frame = -3

Query: 533 LIYSLLRFNNFKLCTK*IYKSFISRKEFRKEI---FWFRFFCWFEVGHNVPLLFPYVHRL 363
           ++Y LL F +       +  S+  RK F K +   F F F  WFE    + L++PY + L
Sbjct: 33  VVYLLLLFISAYFTVILVMTSWRIRK-FHKNMTICFSFYFGAWFECWLGLVLVWPYKNGL 91

Query: 362 F---QLHLTLNNQHINDSNISHMFVLNEEFFQFLSTLCF*LGNVIILHYI 222
                 H+   N   +D  I           ++  T C   G+ +I HY+
Sbjct: 92  VLVEDTHMKFTNFETSDRTIM------AHITKYPETTCLLFGSFLIWHYL 135


>Z70207-8|CAM33501.1|  835|Caenorhabditis elegans Hypothetical
           protein F15A2.6b protein.
          Length = 835

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
 Frame = +3

Query: 120 KVGTKTV-KPVLSSSHAEARNRVLSLYKAWYRQIPYIVKDYDIPKSEAQCREKLKELFIK 296
           KV  K V K  LS S  +   R +++ K    + P+++  YD+        E  K L++ 
Sbjct: 72  KVAIKIVNKEKLSESVLQKVEREIAIMKLI--EHPHVLHLYDV-------YENKKYLYLL 122

Query: 297 NKHVTDIRVIDMLVIKGQMELKESVNIWKQ 386
            +HV+   + D LV KG++  KE+   ++Q
Sbjct: 123 LEHVSGGELFDYLVRKGRLMSKEARKFFRQ 152


>Z70207-5|CAA94127.2|  914|Caenorhabditis elegans Hypothetical
           protein F15A2.6a protein.
          Length = 914

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
 Frame = +3

Query: 120 KVGTKTV-KPVLSSSHAEARNRVLSLYKAWYRQIPYIVKDYDIPKSEAQCREKLKELFIK 296
           KV  K V K  LS S  +   R +++ K    + P+++  YD+        E  K L++ 
Sbjct: 72  KVAIKIVNKEKLSESVLQKVEREIAIMKLI--EHPHVLHLYDV-------YENKKYLYLL 122

Query: 297 NKHVTDIRVIDMLVIKGQMELKESVNIWKQ 386
            +HV+   + D LV KG++  KE+   ++Q
Sbjct: 123 LEHVSGGELFDYLVRKGRLMSKEARKFFRQ 152


>AF316542-1|AAG50270.1|  914|Caenorhabditis elegans serine/threonine
           kinase SAD-1 protein.
          Length = 914

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
 Frame = +3

Query: 120 KVGTKTV-KPVLSSSHAEARNRVLSLYKAWYRQIPYIVKDYDIPKSEAQCREKLKELFIK 296
           KV  K V K  LS S  +   R +++ K    + P+++  YD+        E  K L++ 
Sbjct: 72  KVAIKIVNKEKLSESVLQKVEREIAIMKLI--EHPHVLHLYDV-------YENKKYLYLL 122

Query: 297 NKHVTDIRVIDMLVIKGQMELKESVNIWKQ 386
            +HV+   + D LV KG++  KE+   ++Q
Sbjct: 123 LEHVSGGELFDYLVRKGRLMSKEARKFFRQ 152


>AF002198-8|AAF99931.2|  300|Caenorhabditis elegans Serpentine
           receptor, class bc (class b-like) protein 3 protein.
          Length = 300

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = -1

Query: 403 AIMCPFCFHMFTDSFNSI*PLITSISMTRISVTCLFL 293
           AI  P  FH + DS+ SI  L+ +IS++      ++L
Sbjct: 115 AIYTPIMFHKYRDSYPSIIILMLAISLSMFENLLMYL 151


>AC024801-12|AAF59643.4|  569|Caenorhabditis elegans Hypothetical
           protein Y50D7A.8 protein.
          Length = 569

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 21/81 (25%), Positives = 37/81 (45%)
 Frame = +3

Query: 42  ENVQRVYNHYVIMKMMSLKMSARQAIKVGTKTVKPVLSSSHAEARNRVLSLYKAWYRQIP 221
           EN +RVYNH   +K + +          G +T     ++  AEA        + ++R  P
Sbjct: 153 ENERRVYNHRRRLKQLGVDPEHGTNDVEGVRTQMKQANAKKAEAAR------QRYHRMTP 206

Query: 222 YIVKDYDIPKSEAQCREKLKE 284
              +DY+  ++EA  R + +E
Sbjct: 207 EQKRDYNHRRTEAFRRRRHEE 227


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,460,315
Number of Sequences: 27780
Number of extensions: 258962
Number of successful extensions: 771
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 742
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 770
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1123720628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)