Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc7n23
         (712 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF164153-1|AAD47077.1|  131|Anopheles gambiae ribosomal protein ...    27   0.77 
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    25   3.1  

>AF164153-1|AAD47077.1|  131|Anopheles gambiae ribosomal protein S17
           protein.
          Length = 131

 Score = 26.6 bits (56), Expect = 0.77
 Identities = 21/72 (29%), Positives = 34/72 (47%)
 Frame = +1

Query: 43  LKTSFFRNKIAFFVPVRLINWKHSKVRHSLINFGLHTKQTRSRFSQVPVMGAFSPLDPSS 222
           + T   RNKIA FV   +   +HS+VR   I+  L  ++   R + VP + A    D   
Sbjct: 41  IPTKPLRNKIAGFVTHLMKRLRHSQVRG--ISIKLQEEERERRDNYVPDVSALEQ-DIIE 97

Query: 223 FSRPEQAVIKHV 258
                + ++KH+
Sbjct: 98  VDPETKEMLKHL 109


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 18/69 (26%), Positives = 27/69 (39%)
 Frame = +1

Query: 247 IKHVTLSLNVDFENKVLNGSATLDVDVLQDIGDVVLDSSELTIESIELDGAQLTYKLDDP 426
           I H     NVD   K L G A +    LQD+   +++ S     ++      +    D P
Sbjct: 298 IYHTLNMFNVDVSKKCLFGEAWVPTAGLQDVKTALVNGSAAVGSAVPSFLNIIATDEDPP 357

Query: 427 VPNYGSKLT 453
             N  +K T
Sbjct: 358 TYNKTNKFT 366


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 666,969
Number of Sequences: 2352
Number of extensions: 11560
Number of successful extensions: 27
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72758970
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)