Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc7n22
(707 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 265 2e-71
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 265 2e-71
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 265 2e-71
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 113 2e-25
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 113 2e-25
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 99 4e-21
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 99 4e-21
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 92 4e-19
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 91 5e-19
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 91 7e-19
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 87 9e-18
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 84 8e-17
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 82 4e-16
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 82 4e-16
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 76 3e-14
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 76 3e-14
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 75 7e-14
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 75 7e-14
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 75 7e-14
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 73 3e-13
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 73 3e-13
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 73 3e-13
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 71 6e-13
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 71 6e-13
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 71 8e-13
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 66 2e-11
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 63 2e-10
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 62 3e-10
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 61 9e-10
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 61 9e-10
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 58 6e-09
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 56 3e-08
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 55 4e-08
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 55 4e-08
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 54 8e-08
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 54 1e-07
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 54 1e-07
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 54 1e-07
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 54 1e-07
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 54 1e-07
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 53 2e-07
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 50 2e-06
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 50 2e-06
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 50 2e-06
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 48 5e-06
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 36 0.021
AC024208-1|AAF36054.2| 383|Caenorhabditis elegans Hypothetical ... 29 2.5
Z81074-9|CAB03040.1| 223|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z81098-2|CAB03182.1| 961|Caenorhabditis elegans Hypothetical pr... 27 9.9
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 265 bits (649), Expect = 2e-71
Identities = 122/159 (76%), Positives = 137/159 (86%)
Frame = +1
Query: 205 KEVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSG 384
++ KG+Y SIHSSGFRDFLLKPEILRAI DCGFEHPSEVQHECIPQA+LGMD++CQAKSG
Sbjct: 29 RKTKGTYASIHSSGFRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSG 88
Query: 385 MGKTAVFVLATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGM 564
MGKTAVFV+ TLQQLEP + V V+ MCHTRELAFQISKEYERFSKY+ GV+V+VFFGGM
Sbjct: 89 MGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGM 148
Query: 565 PIQKDEEVLKTACPHIVVGTPGRILALVNSKKLNFETFK 681
I+KDEE L CPHIVVGTPGR+LAL S KL + K
Sbjct: 149 AIKKDEERLANDCPHIVVGTPGRMLALARSGKLKLDKVK 187
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 265 bits (649), Expect = 2e-71
Identities = 122/159 (76%), Positives = 137/159 (86%)
Frame = +1
Query: 205 KEVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSG 384
++ KG+Y SIHSSGFRDFLLKPEILRAI DCGFEHPSEVQHECIPQA+LGMD++CQAKSG
Sbjct: 29 RKTKGTYASIHSSGFRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSG 88
Query: 385 MGKTAVFVLATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGM 564
MGKTAVFV+ TLQQLEP + V V+ MCHTRELAFQISKEYERFSKY+ GV+V+VFFGGM
Sbjct: 89 MGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGM 148
Query: 565 PIQKDEEVLKTACPHIVVGTPGRILALVNSKKLNFETFK 681
I+KDEE L CPHIVVGTPGR+LAL S KL + K
Sbjct: 149 AIKKDEERLANDCPHIVVGTPGRMLALARSGKLKLDKVK 187
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 265 bits (649), Expect = 2e-71
Identities = 122/159 (76%), Positives = 137/159 (86%)
Frame = +1
Query: 205 KEVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSG 384
++ KG+Y SIHSSGFRDFLLKPEILRAI DCGFEHPSEVQHECIPQA+LGMD++CQAKSG
Sbjct: 28 RKTKGTYASIHSSGFRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSG 87
Query: 385 MGKTAVFVLATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGM 564
MGKTAVFV+ TLQQLEP + V V+ MCHTRELAFQISKEYERFSKY+ GV+V+VFFGGM
Sbjct: 88 MGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGM 147
Query: 565 PIQKDEEVLKTACPHIVVGTPGRILALVNSKKLNFETFK 681
I+KDEE L CPHIVVGTPGR+LAL S KL + K
Sbjct: 148 AIKKDEERLANDCPHIVVGTPGRMLALARSGKLKLDKVK 186
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 113 bits (271), Expect = 2e-25
Identities = 61/157 (38%), Positives = 89/157 (56%)
Frame = +1
Query: 211 VKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMG 390
++G+Y + S F D LK E+LR I GFE PS +Q I G D++ QA+SG G
Sbjct: 20 IEGNYDQVVES-FDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTG 78
Query: 391 KTAVFVLATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPI 570
KTA F ++ LQ+++ + HV LVM TRELA QI K +Y++ V + GG +
Sbjct: 79 KTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLN-VNILPCIGGTSV 137
Query: 571 QKDEEVLKTACPHIVVGTPGRILALVNSKKLNFETFK 681
+ D+ L+ H+VVGTPGR+ ++N L+ K
Sbjct: 138 RDDQRKLEAGI-HVVVGTPGRVGDMINRNALDTSRIK 173
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 113 bits (271), Expect = 2e-25
Identities = 61/157 (38%), Positives = 89/157 (56%)
Frame = +1
Query: 211 VKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMG 390
++G+Y + S F D LK E+LR I GFE PS +Q I G D++ QA+SG G
Sbjct: 20 IEGNYDQVVES-FDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTG 78
Query: 391 KTAVFVLATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPI 570
KTA F ++ LQ+++ + HV LVM TRELA QI K +Y++ V + GG +
Sbjct: 79 KTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLN-VNILPCIGGTSV 137
Query: 571 QKDEEVLKTACPHIVVGTPGRILALVNSKKLNFETFK 681
+ D+ L+ H+VVGTPGR+ ++N L+ K
Sbjct: 138 RDDQRKLEAGI-HVVVGTPGRVGDMINRNALDTSRIK 173
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 98.7 bits (235), Expect = 4e-21
Identities = 54/152 (35%), Positives = 85/152 (55%), Gaps = 1/152 (0%)
Frame = +1
Query: 214 KGSYVSIHSS-GFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMG 390
+GS + + S+ F ++ + L + + F+ PS VQ IP +LG D+L QAKSG G
Sbjct: 12 RGSSIDVQSNCTFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTG 71
Query: 391 KTAVFVLATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPI 570
KT VF + ++ L+ SH+ +++ TRE++ QI + + + +G R SV+ GG
Sbjct: 72 KTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKVAP--TGARTSVYVGGSAH 129
Query: 571 QKDEEVLKTACPHIVVGTPGRILALVNSKKLN 666
+ + LK P IV+GTPGRI LV +N
Sbjct: 130 KLNLIDLKQTRPQIVIGTPGRIAQLVKLGAMN 161
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 98.7 bits (235), Expect = 4e-21
Identities = 54/152 (35%), Positives = 85/152 (55%), Gaps = 1/152 (0%)
Frame = +1
Query: 214 KGSYVSIHSS-GFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMG 390
+GS + + S+ F ++ + L + + F+ PS VQ IP +LG D+L QAKSG G
Sbjct: 12 RGSSIDVQSNCTFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTG 71
Query: 391 KTAVFVLATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPI 570
KT VF + ++ L+ SH+ +++ TRE++ QI + + + +G R SV+ GG
Sbjct: 72 KTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKVAP--TGARTSVYVGGSAH 129
Query: 571 QKDEEVLKTACPHIVVGTPGRILALVNSKKLN 666
+ + LK P IV+GTPGRI LV +N
Sbjct: 130 KLNLIDLKQTRPQIVIGTPGRIAQLVKLGAMN 161
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 91.9 bits (218), Expect = 4e-19
Identities = 50/140 (35%), Positives = 72/140 (51%)
Frame = +1
Query: 262 LKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSE 441
L+ ++LR I GFE PS +Q IP + D++ QA+SG GKTA F ++ LQ L+
Sbjct: 33 LREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSISVLQSLDTQV 92
Query: 442 SHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVG 621
L++ TRELA QI K YM+ V+ GG + +D L H+V G
Sbjct: 93 RETQALILSPTRELAVQIQKVVLALGDYMN-VQCHACIGGTNLGEDIRKLDYG-QHVVSG 150
Query: 622 TPGRILALVNSKKLNFETFK 681
TPGR+ ++ + L K
Sbjct: 151 TPGRVFDMIRRRNLRTRAIK 170
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 91.5 bits (217), Expect = 5e-19
Identities = 49/140 (35%), Positives = 72/140 (51%)
Frame = +1
Query: 262 LKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSE 441
L+ ++LR I GFE PS +Q +P + D++ QA+SG GKTA F ++ LQ L+
Sbjct: 33 LREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATFSISVLQSLDTQV 92
Query: 442 SHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVG 621
L++ TRELA QI K YM+ V+ GG + +D L H+V G
Sbjct: 93 RETQALILSPTRELAVQIQKVVLALGDYMN-VQCHACIGGTNLGEDIRKLDYG-QHVVSG 150
Query: 622 TPGRILALVNSKKLNFETFK 681
TPGR+ ++ + L K
Sbjct: 151 TPGRVFDMIRRRNLRTRAIK 170
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 91.1 bits (216), Expect = 7e-19
Identities = 50/145 (34%), Positives = 81/145 (55%)
Frame = +1
Query: 247 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 426
F DF L ++L I + G+E PS +Q I A+ G DIL +AK+G GKT + + +++
Sbjct: 45 FEDFCLGRDLLMGIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEK 104
Query: 427 LEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACP 606
++P+ + +V+ TRELA Q S+ SK++ ++V V GG + +D+ +
Sbjct: 105 IQPALKAIQAMVIVPTRELALQTSQICVELSKHIQ-LKVMVTTGGTDL-RDDIMRLNGTV 162
Query: 607 HIVVGTPGRILALVNSKKLNFETFK 681
H+V+ TPGRIL L+ E K
Sbjct: 163 HLVIATPGRILDLMEKGVAKMEHCK 187
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 87.4 bits (207), Expect = 9e-18
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 4/149 (2%)
Frame = +1
Query: 247 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 426
F L +IL+A G+ P+ +Q CIP A+ G DI A +G GKTA FVL L++
Sbjct: 150 FEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVLPILER 209
Query: 427 L---EPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKT 597
+ S VLV+ TRELA Q+ + + + S ++ + V + GG+ ++ E L++
Sbjct: 210 MIYRPKGASCTRVLVLVPTRELAIQVFQVFRKLSTFIQ-LEVCLCAGGLDLKAQEAALRS 268
Query: 598 ACPHIVVGTPGRIL-ALVNSKKLNFETFK 681
P +VV TPGR++ L NS N +
Sbjct: 269 G-PDVVVATPGRLIDHLHNSPSFNLSNIE 296
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 84.2 bits (199), Expect = 8e-17
Identities = 50/165 (30%), Positives = 82/165 (49%), Gaps = 1/165 (0%)
Frame = +1
Query: 190 EVAPKKEVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILC 369
+V ++ K + F + + + A G+ PS++Q +P A+ G D++
Sbjct: 27 KVVTEEIEKDDEEDVKEKSFAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIG 86
Query: 370 QAKSGMGKTAVFVLATLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSV 549
A++G GKT F + LQ L + LV+ TRELAFQI +++E + G+ +V
Sbjct: 87 LAETGSGKTGAFAIPVLQSLLDHPQAFFCLVLTPTRELAFQIGQQFEALGSGI-GLIAAV 145
Query: 550 FFGGMPIQKDEEVLKTACPHIVVGTPGRIL-ALVNSKKLNFETFK 681
GG+ + L PHI+V TPGR++ L N+K N + K
Sbjct: 146 IVGGVDMAAQAMALARR-PHIIVATPGRLVDHLENTKGFNLKALK 189
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 81.8 bits (193), Expect = 4e-16
Identities = 44/112 (39%), Positives = 65/112 (58%)
Frame = +1
Query: 319 VQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSESHVYVLVMCHTRELAFQIS 498
VQ CIP+ + G DIL A++G GKT F + LQ+L +Y L++ TRELAFQI+
Sbjct: 115 VQAACIPKILEGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIA 174
Query: 499 KEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRILALVNS 654
+++ K ++ ++ SV GG + L PH+VV TPGR+ L+ S
Sbjct: 175 EQFTALGKPIT-LKCSVIVGGRSLIHQARELSER-PHVVVATPGRLADLIES 224
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 81.8 bits (193), Expect = 4e-16
Identities = 44/112 (39%), Positives = 65/112 (58%)
Frame = +1
Query: 319 VQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSESHVYVLVMCHTRELAFQIS 498
VQ CIP+ + G DIL A++G GKT F + LQ+L +Y L++ TRELAFQI+
Sbjct: 115 VQAACIPKILEGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIA 174
Query: 499 KEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRILALVNS 654
+++ K ++ ++ SV GG + L PH+VV TPGR+ L+ S
Sbjct: 175 EQFTALGKPIT-LKCSVIVGGRSLIHQARELSER-PHVVVATPGRLADLIES 224
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 75.8 bits (178), Expect = 3e-14
Identities = 42/138 (30%), Positives = 78/138 (56%), Gaps = 1/138 (0%)
Frame = +1
Query: 238 SSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLAT 417
+ G++ L + +AI GF P+ +Q + IP + G D++ +++G GKTA FV+
Sbjct: 23 AGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPM 82
Query: 418 LQQLEPSE-SHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLK 594
LQ+L+ + + + L++ TRELA Q K + ++ +G+R + GG I++ +
Sbjct: 83 LQKLKRRDTTGIRALMVSPTRELALQTFKVVKELGRF-TGLRCACLVGGDQIEEQFSTIH 141
Query: 595 TACPHIVVGTPGRILALV 648
P I++ TPGR+L ++
Sbjct: 142 EN-PDILLATPGRLLHVI 158
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 75.8 bits (178), Expect = 3e-14
Identities = 42/138 (30%), Positives = 78/138 (56%), Gaps = 1/138 (0%)
Frame = +1
Query: 238 SSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLAT 417
+ G++ L + +AI GF P+ +Q + IP + G D++ +++G GKTA FV+
Sbjct: 23 AGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPM 82
Query: 418 LQQLEPSE-SHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLK 594
LQ+L+ + + + L++ TRELA Q K + ++ +G+R + GG I++ +
Sbjct: 83 LQKLKRRDTTGIRALMVSPTRELALQTFKVVKELGRF-TGLRCACLVGGDQIEEQFSTIH 141
Query: 595 TACPHIVVGTPGRILALV 648
P I++ TPGR+L ++
Sbjct: 142 EN-PDILLATPGRLLHVI 158
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 74.5 bits (175), Expect = 7e-14
Identities = 49/162 (30%), Positives = 81/162 (50%), Gaps = 15/162 (9%)
Frame = +1
Query: 208 EVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGM 387
EV G V F + P ++ + G+ P+ VQ IP + D++ A++G
Sbjct: 128 EVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGS 187
Query: 388 GKTAVFVLATLQQL---------EPSESH---VY---VLVMCHTRELAFQISKEYERFSK 522
GKTA F+L +Q + P+ ++ Y LV+ TRELA QI KE +FS
Sbjct: 188 GKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFS- 246
Query: 523 YMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRILALV 648
Y S ++ ++ +GG +D+ A HI++ TPGR++ ++
Sbjct: 247 YKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRLIDII 288
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 74.5 bits (175), Expect = 7e-14
Identities = 49/162 (30%), Positives = 81/162 (50%), Gaps = 15/162 (9%)
Frame = +1
Query: 208 EVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGM 387
EV G V F + P ++ + G+ P+ VQ IP + D++ A++G
Sbjct: 112 EVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGS 171
Query: 388 GKTAVFVLATLQQL---------EPSESH---VY---VLVMCHTRELAFQISKEYERFSK 522
GKTA F+L +Q + P+ ++ Y LV+ TRELA QI KE +FS
Sbjct: 172 GKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFS- 230
Query: 523 YMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRILALV 648
Y S ++ ++ +GG +D+ A HI++ TPGR++ ++
Sbjct: 231 YKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRLIDII 272
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 74.5 bits (175), Expect = 7e-14
Identities = 49/162 (30%), Positives = 81/162 (50%), Gaps = 15/162 (9%)
Frame = +1
Query: 208 EVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGM 387
EV G V F + P ++ + G+ P+ VQ IP + D++ A++G
Sbjct: 109 EVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGS 168
Query: 388 GKTAVFVLATLQQL---------EPSESH---VY---VLVMCHTRELAFQISKEYERFSK 522
GKTA F+L +Q + P+ ++ Y LV+ TRELA QI KE +FS
Sbjct: 169 GKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFS- 227
Query: 523 YMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRILALV 648
Y S ++ ++ +GG +D+ A HI++ TPGR++ ++
Sbjct: 228 YKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRLIDII 269
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 72.5 bits (170), Expect = 3e-13
Identities = 41/134 (30%), Positives = 75/134 (55%), Gaps = 4/134 (2%)
Frame = +1
Query: 241 SGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLG--MDILCQAKSGMGKTAVFVLA 414
S FR+ LKPE+L+A+ F+ P+ +Q +P ++ +++ QA+SG GKTA FVL
Sbjct: 209 SSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVLT 268
Query: 415 TLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRV--SVFFGGMPIQKDEEV 588
L +++ + + + T ELA QI + E+ K++ +++ ++ G M + ++
Sbjct: 269 MLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNMAAMRGRKL 328
Query: 589 LKTACPHIVVGTPG 630
+ IV+GTPG
Sbjct: 329 TE----QIVIGTPG 338
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 72.5 bits (170), Expect = 3e-13
Identities = 41/134 (30%), Positives = 75/134 (55%), Gaps = 4/134 (2%)
Frame = +1
Query: 241 SGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLG--MDILCQAKSGMGKTAVFVLA 414
S FR+ LKPE+L+A+ F+ P+ +Q +P ++ +++ QA+SG GKTA FVL
Sbjct: 234 SSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVLT 293
Query: 415 TLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRV--SVFFGGMPIQKDEEV 588
L +++ + + + T ELA QI + E+ K++ +++ ++ G M + ++
Sbjct: 294 MLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNMAAMRGRKL 353
Query: 589 LKTACPHIVVGTPG 630
+ IV+GTPG
Sbjct: 354 TE----QIVIGTPG 363
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical protein
T07D4.4a protein.
Length = 1022
Score = 72.5 bits (170), Expect = 3e-13
Identities = 41/134 (30%), Positives = 75/134 (55%), Gaps = 4/134 (2%)
Frame = +1
Query: 241 SGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLG--MDILCQAKSGMGKTAVFVLA 414
S FR+ LKPE+L+A+ F+ P+ +Q +P ++ +++ QA+SG GKTA FVL
Sbjct: 618 SSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVLT 677
Query: 415 TLQQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRV--SVFFGGMPIQKDEEV 588
L +++ + + + T ELA QI + E+ K++ +++ ++ G M + ++
Sbjct: 678 MLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNMAAMRGRKL 737
Query: 589 LKTACPHIVVGTPG 630
+ IV+GTPG
Sbjct: 738 TE----QIVIGTPG 747
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 71.3 bits (167), Expect = 6e-13
Identities = 54/163 (33%), Positives = 78/163 (47%), Gaps = 13/163 (7%)
Frame = +1
Query: 199 PKKEVKGSYVSIHSSGFRDFLLKP-EILRAIVDCGFEHPSEVQHECIPQAVLG-MDILCQ 372
PKK K + S ++ F P E+L AI GF P+E+Q +P AV D+L
Sbjct: 140 PKKSKKEASKKTDISAWKQFYFLPNEVLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGA 199
Query: 373 AKSGMGKTAVF---VLATL-------QQLEPSESH-VYVLVMCHTRELAFQISKEYERFS 519
A++G GKT F ++A L Q+ E +E L++ TREL QI K
Sbjct: 200 AETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQIMKHINALI 259
Query: 520 KYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRILALV 648
+ S+ GG+ K E ++ P IVV TPGR+ A++
Sbjct: 260 STTQLIATSI-VGGLAQVKQERIISQQRPDIVVATPGRLWAMM 301
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 71.3 bits (167), Expect = 6e-13
Identities = 46/160 (28%), Positives = 82/160 (51%), Gaps = 9/160 (5%)
Frame = +1
Query: 211 VKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMG 390
+KG V + + E+ +A+ + G+ P+ +Q + IP + D++ A++G G
Sbjct: 291 IKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVIGVAETGSG 350
Query: 391 KTAVFVL------ATLQQLEPSESH---VYVLVMCHTRELAFQISKEYERFSKYMSGVRV 543
KTA F+L +L ++E E Y ++M TRELA QI +E +F K + V
Sbjct: 351 KTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEETNKFGKLLGIKTV 410
Query: 544 SVFFGGMPIQKDEEVLKTACPHIVVGTPGRILALVNSKKL 663
SV G ++D+ + +V+ TPGR+L ++ ++ L
Sbjct: 411 SVIGGAS--REDQGMKLRMGVEVVIATPGRLLDVLENRYL 448
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 70.9 bits (166), Expect = 8e-13
Identities = 49/147 (33%), Positives = 75/147 (51%), Gaps = 6/147 (4%)
Frame = +1
Query: 247 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATL-- 420
F F ++ AI +E P+ +Q IP A+ G D+L AK+G GKTA ++ +
Sbjct: 267 FAHFSFDKLLMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIVH 326
Query: 421 ----QQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEV 588
L+ E V V+V+ TRELA Q+ +E ++F K + + + GG ++ E
Sbjct: 327 IMDQPDLKAGEGPVAVIVV-PTRELAIQVFQEAKKFCKVYNINPICAYGGGSKWEQSNE- 384
Query: 589 LKTACPHIVVGTPGRILALVNSKKLNF 669
L+ +VV TPGRI+ LV NF
Sbjct: 385 LQNEGAEMVVCTPGRIIDLVKMGATNF 411
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 66.1 bits (154), Expect = 2e-11
Identities = 44/129 (34%), Positives = 73/129 (56%), Gaps = 8/129 (6%)
Frame = +1
Query: 301 FEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQ------QLEPSESHVYVLV 462
+ P+ +Q + IP + G D++ AK+G GKT F+L + +LE + + V +
Sbjct: 324 YSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAV-I 382
Query: 463 MCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRILA 642
+ TRELA Q KE +F+K + G++V+ +GG+ I + LK IVV TPGR++
Sbjct: 383 LAPTRELAMQTYKEANKFAKPL-GLKVACTYGGVGISEQIADLKRGA-EIVVCTPGRMID 440
Query: 643 LV--NSKKL 663
++ NS K+
Sbjct: 441 VLAANSGKV 449
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 63.3 bits (147), Expect = 2e-10
Identities = 51/172 (29%), Positives = 81/172 (47%), Gaps = 17/172 (9%)
Frame = +1
Query: 208 EVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGM 387
E G V S F D L I I G++ P+ VQ IP G D++ A++G
Sbjct: 155 EATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSCAQTGS 214
Query: 388 GKTAVFVLATLQQL---EPSESHVYV-------------LVMCHTRELAFQISKEYERFS 519
GKTA F++ + + P H V LV+ TREL+ QI E +F+
Sbjct: 215 GKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELSLQIFNESRKFA 274
Query: 520 KYMSGVRVSVFFGGMPIQKDE-EVLKTACPHIVVGTPGRILALVNSKKLNFE 672
Y + + ++ +GG KD+ L+ C HI++ TPGR++ +++ + E
Sbjct: 275 -YRTPITSALLYGGRENYKDQIHKLRLGC-HILIATPGRLIDVMDQGLIGME 324
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 62.5 bits (145), Expect = 3e-10
Identities = 35/139 (25%), Positives = 68/139 (48%)
Frame = +1
Query: 262 LKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSE 441
LK E+LR I GFE PS +Q + G D+ Q+++G GKT + ++ LQ ++ +
Sbjct: 3 LKEELLRGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQGIDCED 62
Query: 442 SHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVG 621
+H+ V+++ R +A + +E+ + V+ G + + + H+++G
Sbjct: 63 AHLQVILLAPQRGMA---QRAHEQLKSLGRNLNVNATCLGFDTTAENDKIS----HVLMG 115
Query: 622 TPGRILALVNSKKLNFETF 678
TP L+ + S + F
Sbjct: 116 TPKDFLSNIPSDTSRIKMF 134
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 60.9 bits (141), Expect = 9e-10
Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 10/151 (6%)
Frame = +1
Query: 214 KGSYVSIHS-SGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMG 390
+G V+I F D + + R + G+ + +Q +P G DIL A++G G
Sbjct: 288 RGQPVTIQPCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSG 347
Query: 391 KTAVFVLATLQQL-------EPSESHVY--VLVMCHTRELAFQISKEYERFSKYMSGVRV 543
KTA F+L + +L +E Y +++ TRELA QI E +FS Y S + +
Sbjct: 348 KTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFS-YQSVMEI 406
Query: 544 SVFFGGMPIQKDEEVLKTACPHIVVGTPGRI 636
+GG+ + ++ + C I+VGT GR+
Sbjct: 407 KPVYGGINVGYNKSQIMKGCT-IIVGTIGRV 436
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 60.9 bits (141), Expect = 9e-10
Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 10/151 (6%)
Frame = +1
Query: 214 KGSYVSIHS-SGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMG 390
+G V+I F D + + R + G+ + +Q +P G DIL A++G G
Sbjct: 288 RGQPVTIQPCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSG 347
Query: 391 KTAVFVLATLQQL-------EPSESHVY--VLVMCHTRELAFQISKEYERFSKYMSGVRV 543
KTA F+L + +L +E Y +++ TRELA QI E +FS Y S + +
Sbjct: 348 KTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFS-YQSVMEI 406
Query: 544 SVFFGGMPIQKDEEVLKTACPHIVVGTPGRI 636
+GG+ + ++ + C I+VGT GR+
Sbjct: 407 KPVYGGINVGYNKSQIMKGCT-IIVGTIGRV 436
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 58.0 bits (134), Expect = 6e-09
Identities = 43/129 (33%), Positives = 65/129 (50%), Gaps = 11/129 (8%)
Frame = +1
Query: 298 GFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVL-------ATLQQLEPSESH--- 447
GFE PS +Q + P + G D + +++G GKT F+L A L Q E ++
Sbjct: 103 GFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPALLHIDAQLAQYEKNDEEQKP 162
Query: 448 -VYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGT 624
+VLV+ TRELA QI E +++S +G + +GG + E + IV+ T
Sbjct: 163 SPFVLVLSPTRELAQQIEGEVKKYS--YNGYKSVCLYGGGSRPEQVEACRGGV-EIVIAT 219
Query: 625 PGRILALVN 651
PGR+ L N
Sbjct: 220 PGRLTDLSN 228
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 55.6 bits (128), Expect = 3e-08
Identities = 40/135 (29%), Positives = 65/135 (48%), Gaps = 4/135 (2%)
Frame = +1
Query: 247 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 426
F DF L L + D + P+E+Q + I ++ G D++ AK+G GKT V+ L+
Sbjct: 78 FEDFPLSWRTLEGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVLEA 137
Query: 427 LEPSE-SHVY---VLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLK 594
L ++ S Y L++ TRELA Q + G + GG + + +
Sbjct: 138 LWRAKWSPDYGLGALIISPTRELALQTFSTINAVGAH-HGFSCGLVIGGSDVAFERN--R 194
Query: 595 TACPHIVVGTPGRIL 639
+ +I+V TPGR+L
Sbjct: 195 ISGINIIVCTPGRLL 209
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 55.2 bits (127), Expect = 4e-08
Identities = 42/130 (32%), Positives = 66/130 (50%), Gaps = 6/130 (4%)
Frame = +1
Query: 301 FEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSESH------VYVLV 462
F+ P+ +Q P A+ G DI+ AK+G GKT F+L L + ++H VLV
Sbjct: 149 FQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHI-TKQAHRQRGEGPAVLV 207
Query: 463 MCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRILA 642
+ TRELA Q+ + F + G++++ FGG L+ IVV TPGR+L
Sbjct: 208 LLPTRELAQQVQEVSIDFC-HSLGLKMTCLFGGASKGPQARDLERGV-DIVVATPGRLLD 265
Query: 643 LVNSKKLNFE 672
+++ N +
Sbjct: 266 FLDNGTTNMK 275
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 55.2 bits (127), Expect = 4e-08
Identities = 42/128 (32%), Positives = 62/128 (48%), Gaps = 12/128 (9%)
Frame = +1
Query: 301 FEHPSEVQHECIPQAVLG-MDILCQAKSGMGKTAVF---VLATL-------QQLEPSESH 447
F P+E+Q +P AV D+L A++G GKT F ++A L Q+ E +E
Sbjct: 8 FSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVR 67
Query: 448 -VYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHIVVGT 624
L++ TREL QI K + S+ GG+ K E ++ P IVV T
Sbjct: 68 GPRALIVAPTRELVIQIMKHINALISTTQLIATSIV-GGLAQVKQERIISQQRPDIVVAT 126
Query: 625 PGRILALV 648
PGR+ A++
Sbjct: 127 PGRLWAMM 134
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 54.4 bits (125), Expect = 8e-08
Identities = 34/136 (25%), Positives = 73/136 (53%), Gaps = 3/136 (2%)
Frame = +1
Query: 262 LKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSE 441
L PE+L + D ++ ++VQ + D++ ++ +G GKT FVL ++ ++ ++
Sbjct: 17 LGPELLE-VFDKSYKSFTDVQVLSGTHLLNLSDVVVESPTGSGKTLAFVLPMMRMIQNAK 75
Query: 442 ---SHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDEEVLKTACPHI 612
+ + L++ +REL QI + F++ ++ + V GG + K+ ++ K +I
Sbjct: 76 LQPADIGALILSPSRELCSQIVSVIQPFAEKLN-LTVETVTGGQKVDKNIKMFKNKNVNI 134
Query: 613 VVGTPGRILALVNSKK 660
+V TPGR+ ++ +K
Sbjct: 135 LVATPGRLFQIIQHEK 150
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 54.0 bits (124), Expect = 1e-07
Identities = 38/139 (27%), Positives = 68/139 (48%), Gaps = 9/139 (6%)
Frame = +1
Query: 247 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 426
F + L + + + G+ + +Q +P G DI+ A++G GKTA F+L + +
Sbjct: 343 FAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTR 402
Query: 427 L-------EPSESHVY--VLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKD 579
L E Y +++ TRELA QI E +F+ Y + + + +GG+ + +
Sbjct: 403 LIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFA-YQTMMEIKPVYGGLAVGYN 461
Query: 580 EEVLKTACPHIVVGTPGRI 636
+ ++ I+VGT GRI
Sbjct: 462 KGQIEKGAT-IIVGTVGRI 479
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 54.0 bits (124), Expect = 1e-07
Identities = 38/139 (27%), Positives = 68/139 (48%), Gaps = 9/139 (6%)
Frame = +1
Query: 247 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 426
F + L + + + G+ + +Q +P G DI+ A++G GKTA F+L + +
Sbjct: 343 FAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTR 402
Query: 427 L-------EPSESHVY--VLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKD 579
L E Y +++ TRELA QI E +F+ Y + + + +GG+ + +
Sbjct: 403 LIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFA-YQTMMEIKPVYGGLAVGYN 461
Query: 580 EEVLKTACPHIVVGTPGRI 636
+ ++ I+VGT GRI
Sbjct: 462 KGQIEKGAT-IIVGTVGRI 479
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 54.0 bits (124), Expect = 1e-07
Identities = 40/140 (28%), Positives = 75/140 (53%), Gaps = 7/140 (5%)
Frame = +1
Query: 247 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 426
F DF L IL++I + G+E ++VQ I A+ +I+ +A++G GKT F++ +Q+
Sbjct: 91 FADFGLDERILKSIGELGWEKANQVQESVISLALENKNIMGRARTGSGKTGAFLIPLVQK 150
Query: 427 L----EPSESHV--YVLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKDE-E 585
L + ++ V +++ T+EL QI K + + S+ + ++ I ++E
Sbjct: 151 LIAESKTNDGSVGPSAVIIAPTKELITQIYKLFVKLSQALPFLQA---INLCDINEEENS 207
Query: 586 VLKTACPHIVVGTPGRILAL 645
V H+VV TPG++L +
Sbjct: 208 VWLEDRSHVVVTTPGKLLRM 227
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 54.0 bits (124), Expect = 1e-07
Identities = 38/139 (27%), Positives = 68/139 (48%), Gaps = 9/139 (6%)
Frame = +1
Query: 247 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 426
F + L + + + G+ + +Q +P G DI+ A++G GKTA F+L + +
Sbjct: 343 FAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTR 402
Query: 427 L-------EPSESHVY--VLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKD 579
L E Y +++ TRELA QI E +F+ Y + + + +GG+ + +
Sbjct: 403 LIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFA-YQTMMEIKPVYGGLAVGYN 461
Query: 580 EEVLKTACPHIVVGTPGRI 636
+ ++ I+VGT GRI
Sbjct: 462 KGQIEKGAT-IIVGTVGRI 479
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 53.6 bits (123), Expect = 1e-07
Identities = 38/128 (29%), Positives = 65/128 (50%), Gaps = 6/128 (4%)
Frame = +1
Query: 274 ILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLE----PSE 441
+L+A+ GF +E+Q + I + G D+L AK+G GKT F+L ++ L
Sbjct: 79 LLKAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAIELLHKLNWKQH 138
Query: 442 SHVYVLVMCHTRELAFQISKEYERFSKYMSGVRVS--VFFGGMPIQKDEEVLKTACPHIV 615
+ V+++ TREL+ Q Y S+ + G ++ + GG +++ L I+
Sbjct: 139 NGTGVIIVSPTRELSMQ---TYGVLSELLEGSNLTYGLVMGGSNRSAEKDKLAKGV-SIL 194
Query: 616 VGTPGRIL 639
V TPGR+L
Sbjct: 195 VATPGRLL 202
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 52.8 bits (121), Expect = 2e-07
Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 13/138 (9%)
Frame = +1
Query: 298 GFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSESHV--------Y 453
G P+ +Q + IP A+ G D++ A +G GKT FVL + E + +
Sbjct: 209 GIVTPTAIQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPF 268
Query: 454 VLVMCHTRELAFQ----ISKEYERFSKY-MSGVRVSVFFGGMPIQKDEEVLKTACPHIVV 618
L++ +RELA Q I + ++ K + +R + GG+PI + + ++ HIVV
Sbjct: 269 GLIIVPSRELARQIFDLIIEMFDALGKAGLPEMRAGLCIGGVPIGEQAKDVRDGI-HIVV 327
Query: 619 GTPGRILALVNSKKLNFE 672
TPGR+ ++ K +N E
Sbjct: 328 ATPGRLSDMLTKKIINLE 345
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 50.0 bits (114), Expect = 2e-06
Identities = 37/139 (26%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Frame = +1
Query: 247 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 426
F + L + + + G+ + +Q +P G DI+ A++G GKTA F+L + +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 427 L-------EPSESHVY--VLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKD 579
L E Y +++ TREL QI E +F+ Y + + + +GG+ + +
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFA-YQTMMEIRPVYGGLAVGYN 672
Query: 580 EEVLKTACPHIVVGTPGRI 636
+ ++ I+VGT GRI
Sbjct: 673 KGQIEKGAT-IIVGTVGRI 690
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 50.0 bits (114), Expect = 2e-06
Identities = 37/139 (26%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Frame = +1
Query: 247 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 426
F + L + + + G+ + +Q +P G DI+ A++G GKTA F+L + +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 427 L-------EPSESHVY--VLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKD 579
L E Y +++ TREL QI E +F+ Y + + + +GG+ + +
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFA-YQTMMEIRPVYGGLAVGYN 672
Query: 580 EEVLKTACPHIVVGTPGRI 636
+ ++ I+VGT GRI
Sbjct: 673 KGQIEKGAT-IIVGTVGRI 690
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 50.0 bits (114), Expect = 2e-06
Identities = 37/139 (26%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Frame = +1
Query: 247 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 426
F + L + + + G+ + +Q +P G DI+ A++G GKTA F+L + +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 427 L-------EPSESHVY--VLVMCHTRELAFQISKEYERFSKYMSGVRVSVFFGGMPIQKD 579
L E Y +++ TREL QI E +F+ Y + + + +GG+ + +
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFA-YQTMMEIRPVYGGLAVGYN 672
Query: 580 EEVLKTACPHIVVGTPGRI 636
+ ++ I+VGT GRI
Sbjct: 673 KGQIEKGAT-IIVGTVGRI 690
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 48.4 bits (110), Expect = 5e-06
Identities = 37/154 (24%), Positives = 71/154 (46%), Gaps = 10/154 (6%)
Frame = +1
Query: 208 EVKGSYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGM 387
E++ + + + + + L P IL + + + +Q IPQ + G D+L QA++
Sbjct: 370 EIRNAEKDVRLTSWTNSGLHPTILETLKRIKYNNVRTIQGAMIPQVLDGHDVLGQAETSA 429
Query: 388 GKTAVFVLATLQQLEPSESHV----------YVLVMCHTRELAFQISKEYERFSKYMSGV 537
GKTA F L + ++ + L++ TRELA QI + + + + +
Sbjct: 430 GKTAAFGLPIIDKILRMDEETRNKARQDDGPLALILAPTRELAAQIHEALRTYCQ-NTDI 488
Query: 538 RVSVFFGGMPIQKDEEVLKTACPHIVVGTPGRIL 639
V + +G + ++ C I++GT GRI+
Sbjct: 489 IVLLSYGQSDRARSLNEIRNGC-DILIGTCGRIM 521
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 36.3 bits (80), Expect = 0.021
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Frame = +1
Query: 421 QQLEPSESHVYVLVMCHTRELAFQISKEYERFSKYMSG--VRVSVFFGGMPIQKDEEVLK 594
+QL S +++ TREL Q + + F+ + +R G + + L+
Sbjct: 273 EQLSIDSSTPLCVILEPTRELVQQTFQNIQTFASVLDSPKIRCVTLAAGENMNQILRTLE 332
Query: 595 TACPHIVVGTPGRILALVNSKKL 663
T C IVVGTP R+ L+++ KL
Sbjct: 333 TGCD-IVVGTPSRVFDLIHTGKL 354
>AC024208-1|AAF36054.2| 383|Caenorhabditis elegans Hypothetical
protein Y75B7B.1 protein.
Length = 383
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +1
Query: 550 FFGGMPIQKDEEVLKTACPHIVVGTPGRILALVNSKKLNFETFKNTSSLMS 702
F+ P DE+ LKT P I VG+ L L + KK+ +T +NT +++
Sbjct: 230 FWAVNPEPNDED-LKTTAPIISVGSEH--LELYHDKKITLQTIENTQLMLN 277
>Z81074-9|CAB03040.1| 223|Caenorhabditis elegans Hypothetical
protein F32B6.4 protein.
Length = 223
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = +3
Query: 309 SFRSSTRMHSASRPRYGHTLSSQ--VRYG*DSRVCFGNIAAAGTVREPRL 452
S S+T + A P G +S + G DSR N+ A T+ EP L
Sbjct: 52 SSNSTTELQGAQSPSMGSRVSDSHLLTLGSDSRSVSNNLNIAATMAEPNL 101
>Z81098-2|CAB03182.1| 961|Caenorhabditis elegans Hypothetical
protein K07A12.2 protein.
Length = 961
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1
Query: 529 SGVRVSVFFGGMPIQKDEEVLKTACPHIVVGTPG 630
+G V GG P+ D E L + P++VV PG
Sbjct: 585 TGPLVRFATGGQPVASDIEQLIRSIPNMVVNVPG 618
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,952,132
Number of Sequences: 27780
Number of extensions: 337530
Number of successful extensions: 934
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 900
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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