Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc7n21
         (208 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q06669 Cluster: Uncharacterized 15.5 kDa protein in IAP...   123   9e-28
UniRef50_Q0N433 Cluster: Ac75-like protein; n=1; Clanis bilineat...    48   6e-05
UniRef50_O10328 Cluster: Uncharacterized 14.9 kDa protein; n=5; ...    46   1e-04
UniRef50_Q897Y8 Cluster: Predicted amidohydrolase; n=2; Clostrid...    31   5.1  
UniRef50_Q4DG57 Cluster: Putative uncharacterized protein; n=2; ...    31   6.8  
UniRef50_Q80LN7 Cluster: Putative uncharacterized protein; n=1; ...    30   9.0  

>UniRef50_Q06669 Cluster: Uncharacterized 15.5 kDa protein in
           IAP2-VLF1 intergenic region; n=7;
           Nucleopolyhedrovirus|Rep: Uncharacterized 15.5 kDa
           protein in IAP2-VLF1 intergenic region - Autographa
           californica nuclear polyhedrosis virus (AcMNPV)
          Length = 133

 Score =  123 bits (296), Expect = 9e-28
 Identities = 59/63 (93%), Positives = 60/63 (95%)
 Frame = +3

Query: 18  VDSSNKLSRRQVDFLIHALLNNVSVTFTLHRFVDDXXLTQDELXFLANFLVTKLDEAYQL 197
           VDSSNKLSRRQVDFLIHALLNNVSVTFTLHRFVDD  LTQDEL FLANFLVTK+DEAYQL
Sbjct: 71  VDSSNKLSRRQVDFLIHALLNNVSVTFTLHRFVDDNVLTQDELSFLANFLVTKMDEAYQL 130

Query: 198 PAY 206
           PAY
Sbjct: 131 PAY 133


>UniRef50_Q0N433 Cluster: Ac75-like protein; n=1; Clanis bilineata
           nucleopolyhedrosis virus|Rep: Ac75-like protein - Clanis
           bilineata nucleopolyhedrosis virus
          Length = 130

 Score = 47.6 bits (108), Expect = 6e-05
 Identities = 22/57 (38%), Positives = 34/57 (59%)
 Frame = +3

Query: 18  VDSSNKLSRRQVDFLIHALLNNVSVTFTLHRFVDDXXLTQDELXFLANFLVTKLDEA 188
           VDS NKL+  Q+DFL   + +N  V   LH FVD+  +   ++  LA FL+T++  +
Sbjct: 69  VDSPNKLTADQIDFLCQQVQHNHEVMRILHTFVDEQHIDDQDIHELAKFLITEISNS 125


>UniRef50_O10328 Cluster: Uncharacterized 14.9 kDa protein; n=5;
           Nucleopolyhedrovirus|Rep: Uncharacterized 14.9 kDa
           protein - Orgyia pseudotsugata multicapsid polyhedrosis
           virus (OpMNPV)
          Length = 130

 Score = 46.4 bits (105), Expect = 1e-04
 Identities = 21/60 (35%), Positives = 36/60 (60%)
 Frame = +3

Query: 18  VDSSNKLSRRQVDFLIHALLNNVSVTFTLHRFVDDXXLTQDELXFLANFLVTKLDEAYQL 197
           +D S  L+  Q+++L  A  NN  +     +FVD   L+ D++  L+N+LV +++E YQL
Sbjct: 71  IDPSKLLTVGQINYLARAFRNNRKMMSITQKFVDGYRLSDDDISELSNYLVAQVEEVYQL 130


>UniRef50_Q897Y8 Cluster: Predicted amidohydrolase; n=2;
           Clostridium|Rep: Predicted amidohydrolase - Clostridium
           tetani
          Length = 400

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
 Frame = +3

Query: 21  DSSNKLSRRQVDFLIHALL---NNVSVTFTLHRFVDDXXLTQDELXFLANFLVTKLDEAY 191
           D + K++  + D  +H+L+   + + V FT H+  D     +    F  N+ V K  EAY
Sbjct: 206 DKTGKVNPPKFDIKLHSLMRVFDGMLVKFTTHQAYDILTAIRIGEEFKLNYTVDKCSEAY 265

Query: 192 QLP 200
            +P
Sbjct: 266 LIP 268


>UniRef50_Q4DG57 Cluster: Putative uncharacterized protein; n=2;
           Trypanosoma cruzi|Rep: Putative uncharacterized protein
           - Trypanosoma cruzi
          Length = 995

 Score = 30.7 bits (66), Expect = 6.8
 Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = +3

Query: 66  HALLNNVSVT-FTLHRFVDDXXLTQDELXFLANFLVTKLDEA 188
           HA++    +  + LHRF+ D  + +D+L  L   L T +D++
Sbjct: 164 HAVVGEQKILRYMLHRFISDETMWRDDLLALLELLFTSVDQS 205


>UniRef50_Q80LN7 Cluster: Putative uncharacterized protein; n=1;
           Adoxophyes honmai NPV|Rep: Putative uncharacterized
           protein - Adoxophyes honmai nucleopolyhedrovirus
          Length = 129

 Score = 30.3 bits (65), Expect = 9.0
 Identities = 15/51 (29%), Positives = 28/51 (54%)
 Frame = +3

Query: 36  LSRRQVDFLIHALLNNVSVTFTLHRFVDDXXLTQDELXFLANFLVTKLDEA 188
           L+  QV++L +  +NN +V   L  F     LT + +  +A F+V +++ A
Sbjct: 74  LTINQVNYLYYQAVNNNNVIHILQLFTKGHCLTDEHINDIAAFIVYEINNA 124


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,045,088
Number of Sequences: 1657284
Number of extensions: 1649428
Number of successful extensions: 3394
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3349
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3394
length of database: 575,637,011
effective HSP length: 47
effective length of database: 497,744,663
effective search space used: 10452637923
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)