Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc7n13
(396 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A5K663 Cluster: U5 small nuclear ribonucleoprotein-spec... 34 0.87
UniRef50_Q54XC9 Cluster: Putative uncharacterized protein; n=1; ... 33 2.0
UniRef50_Q4YYA3 Cluster: Putative uncharacterized protein; n=1; ... 33 2.0
UniRef50_A5K7K9 Cluster: Putative uncharacterized protein; n=1; ... 33 2.7
UniRef50_Q4T1X3 Cluster: Chromosome 1 SCAF10457, whole genome sh... 32 3.5
UniRef50_Q97M26 Cluster: Similar to ABC transporter; n=1; Clostr... 32 3.5
UniRef50_Q8IBS2 Cluster: Putative uncharacterized protein PF07_0... 32 3.5
UniRef50_P96800 Cluster: Uncharacterized protein Mbar_A1602; n=1... 32 3.5
UniRef50_Q4N8K5 Cluster: Putative uncharacterized protein; n=1; ... 32 4.6
UniRef50_Q7VRC8 Cluster: Prolyl-tRNA synthetase; n=2; Candidatus... 32 4.6
UniRef50_O75473 Cluster: Leucine-rich repeat-containing G-protei... 32 4.6
UniRef50_Q8ILE1 Cluster: Putative uncharacterized protein; n=1; ... 31 6.1
UniRef50_Q8IHU5 Cluster: Putative uncharacterized protein; n=2; ... 31 6.1
UniRef50_Q4XUB3 Cluster: U5 small nuclear ribonucleoprotein-spec... 31 6.1
UniRef50_A6VHM2 Cluster: Putative uncharacterized protein; n=1; ... 31 6.1
UniRef50_UPI00006CFB79 Cluster: hypothetical protein TTHERM_0048... 31 8.1
UniRef50_Q8IFP1 Cluster: U5 small nuclear ribonucleoprotein-spec... 31 8.1
UniRef50_Q8IAV6 Cluster: Putative uncharacterized protein PF08_0... 31 8.1
UniRef50_Q4UEP5 Cluster: Isoleucyl-trna synthetase, putative; n=... 31 8.1
UniRef50_Q09F14 Cluster: Heme maturase; n=1; Tetrahymena pigment... 31 8.1
UniRef50_A0E2L0 Cluster: Chromosome undetermined scaffold_75, wh... 31 8.1
UniRef50_A0BG11 Cluster: Chromosome undetermined scaffold_105, w... 31 8.1
>UniRef50_A5K663 Cluster: U5 small nuclear ribonucleoprotein-specific
protein, putative; n=4; Plasmodium|Rep: U5 small nuclear
ribonucleoprotein-specific protein, putative - Plasmodium
vivax
Length = 2675
Score = 34.3 bits (75), Expect = 0.87
Identities = 19/57 (33%), Positives = 32/57 (56%)
Frame = -3
Query: 358 KHNLLYTNYYVKILFSSYYFIDLSL*AMFTKIV*KHYYENETLQIFSQ*VQNQNLFI 188
K N + + Y KI SSYY++D M+ K + +H E E L++F + +N+F+
Sbjct: 1284 KLNTVSSTYVGKI--SSYYYVDYRSIDMYNKKLNRHTNETELLKLFGMSDEFKNIFV 1338
>UniRef50_Q54XC9 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 961
Score = 33.1 bits (72), Expect = 2.0
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = -2
Query: 227 NFFSISTKSKPFYYYACLICMCKNVYKISINMNLNNNLCQMAY 99
NF S++ +S YYY+ + C +Y I + L+N +C + +
Sbjct: 42 NFLSVNNQSSEIYYYSPIEC---KLYVIKVESTLDNTICAIRF 81
>UniRef50_Q4YYA3 Cluster: Putative uncharacterized protein; n=1;
Plasmodium berghei|Rep: Putative uncharacterized protein
- Plasmodium berghei
Length = 79
Score = 33.1 bits (72), Expect = 2.0
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3
Query: 373 FYFCIKHNLLYTNYYVKILFSSYYF 299
FYFC+ NL NYY+ I+ +YF
Sbjct: 29 FYFCVFLNLFCFNYYISIVLRVFYF 53
>UniRef50_A5K7K9 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 2581
Score = 32.7 bits (71), Expect = 2.7
Identities = 22/68 (32%), Positives = 34/68 (50%)
Frame = -3
Query: 382 CKRFYFCIKHNLLYTNYYVKILFSSYYFIDLSL*AMFTKIV*KHYYENETLQIFSQ*VQN 203
C + IK N +T+ ILF+ Y L A KI+ K+ Y++E + ++ QN
Sbjct: 1193 CNSYVSFIKPNPFFTDV---ILFACYRKYIYLLNAQKKKIIKKYSYDSELKNLSAEWSQN 1249
Query: 202 QNLFIIMH 179
LFI+ H
Sbjct: 1250 GYLFIVSH 1257
>UniRef50_Q4T1X3 Cluster: Chromosome 1 SCAF10457, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 1 SCAF10457, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 1232
Score = 32.3 bits (70), Expect = 3.5
Identities = 22/59 (37%), Positives = 32/59 (54%)
Frame = -1
Query: 300 LLIYHYRQCLQKSYKNIIMKMKHYKFFLNKYKIKTFLLLCMFNMHVQKCL*NIHKYEFE 124
L+IYH LQK Y + +K + F N+ + KT LL + N+ +KC+ H Y FE
Sbjct: 234 LVIYHGITALQKKYYKAFL-LKDHGAFQNEQRNKTRLLNILINL--RKCV--NHPYMFE 287
>UniRef50_Q97M26 Cluster: Similar to ABC transporter; n=1;
Clostridium acetobutylicum|Rep: Similar to ABC
transporter - Clostridium acetobutylicum
Length = 438
Score = 32.3 bits (70), Expect = 3.5
Identities = 22/70 (31%), Positives = 35/70 (50%)
Frame = -1
Query: 315 FLLTTLLIYHYRQCLQKSYKNIIMKMKHYKFFLNKYKIKTFLLLCMFNMHVQKCL*NIHK 136
+L ++ ++ R+ ++KS NI M+MK K K TFLL M + + N +
Sbjct: 238 YLSSSPFMWIVRKVVKKSKNNIYMQMKSVKSMFEMDKKLTFLLSVMSFIIISYVRINYYT 297
Query: 135 YEFE*QLMSN 106
Y+ Q MSN
Sbjct: 298 YDTGYQGMSN 307
>UniRef50_Q8IBS2 Cluster: Putative uncharacterized protein PF07_0074;
n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PF07_0074 - Plasmodium falciparum
(isolate 3D7)
Length = 1530
Score = 32.3 bits (70), Expect = 3.5
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Frame = -2
Query: 269 KNRIKTLL*K*NITNFFS---ISTKSKPFYYYACLICMCKNVYKISINMNLNNNLC 111
KN+IK + + ++ S I +S P+Y+Y K KI IN+N++NN+C
Sbjct: 991 KNKIKYPIQRDSLVPLCSSHPIPLESYPYYHYYYSNVHTKKEPKIDININVDNNMC 1046
>UniRef50_P96800 Cluster: Uncharacterized protein Mbar_A1602; n=1;
Methanosarcina barkeri str. Fusaro|Rep: Uncharacterized
protein Mbar_A1602 - Methanosarcina barkeri (strain
Fusaro / DSM 804)
Length = 387
Score = 32.3 bits (70), Expect = 3.5
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +2
Query: 98 NMPFDISCYSNSYLWIFYKHFCTCILNMHNNKKV 199
NM FD N YLWIF K C+ N+K+
Sbjct: 186 NMTFDFGTVPNGYLWIFPKDEYVCVGAYTTNRKM 219
>UniRef50_Q4N8K5 Cluster: Putative uncharacterized protein; n=1;
Theileria parva|Rep: Putative uncharacterized protein -
Theileria parva
Length = 2860
Score = 31.9 bits (69), Expect = 4.6
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +2
Query: 71 IFMNCLEMVNMPFDISCYSNSYLWIFYKHF 160
+F++CL+ N+ ++SC + YL + HF
Sbjct: 1400 LFLSCLQPTNLSIEVSCLISKYLLLILYHF 1429
>UniRef50_Q7VRC8 Cluster: Prolyl-tRNA synthetase; n=2; Candidatus
Blochmannia|Rep: Prolyl-tRNA synthetase - Blochmannia
floridanus
Length = 581
Score = 31.9 bits (69), Expect = 4.6
Identities = 19/63 (30%), Positives = 33/63 (52%)
Frame = -1
Query: 384 IVKDFISVLNTXXXXXXXXXXXYFLLTTLLIYHYRQCLQKSYKNIIMKMKHYKFFLNKYK 205
IV + I +LNT + L+ LI +Y+ +Q++ KNII+ +K+ N ++
Sbjct: 243 IVINNIHILNTIQTIKLTSADFHNLIIMRLINYYKSFIQETIKNIIIYIKNKNNIYNLHR 302
Query: 204 IKT 196
I T
Sbjct: 303 IAT 305
>UniRef50_O75473 Cluster: Leucine-rich repeat-containing G-protein
coupled receptor 5 precursor; n=23; Vertebrata|Rep:
Leucine-rich repeat-containing G-protein coupled
receptor 5 precursor - Homo sapiens (Human)
Length = 907
Score = 31.9 bits (69), Expect = 4.6
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -2
Query: 227 NFFSISTKSKPFYYYACLICMCKNVYKISINMNLNNN 117
NF + P+ Y C +C+N YKIS N +N
Sbjct: 464 NFPELKVIEMPYAYQCCAFGVCENAYKISNQWNKGDN 500
>UniRef50_Q8ILE1 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 666
Score = 31.5 bits (68), Expect = 6.1
Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 6/60 (10%)
Frame = +2
Query: 50 NNQTGHVIFMNCLEMVNMPFDIS-CYSNSYLWIFYKHFCT-CILN--MHN--NKKVLILY 211
NN +I NCL++ N P++ Y N+ I++KHF + I+N +HN NK ++L+
Sbjct: 185 NNNKVQIINKNCLQLFNEPYNFDLIYINN---IYFKHFISNKIINKYIHNFVNKNNVVLF 241
>UniRef50_Q8IHU5 Cluster: Putative uncharacterized protein; n=2;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium falciparum (isolate 3D7)
Length = 692
Score = 31.5 bits (68), Expect = 6.1
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Frame = +2
Query: 74 FMNCLEMVNMPFDISCYSNSYLWIFYKHFCTCILNMHNN----KKVLILYLLRKN 226
++N +++ NM + S Y+ Y FYK FC + + N+ ++V+IL + KN
Sbjct: 444 YLNNIDISNMCYTFSLYNYYYTNDFYKSFCLKSMEIINDIEPLQRVIILTYMLKN 498
>UniRef50_Q4XUB3 Cluster: U5 small nuclear ribonucleoprotein-specific
protein, putative; n=5; Plasmodium (Vinckeia)|Rep: U5
small nuclear ribonucleoprotein-specific protein,
putative - Plasmodium chabaudi
Length = 1538
Score = 31.5 bits (68), Expect = 6.1
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Frame = -3
Query: 391 FLNCKRFYFCIKHNLLYTNYYVKIL--FSSYYFIDLSL*AMFTKIV*KHYYENETLQIFS 218
FL ++ Y +K+N N + SS+Y+ID M+ K + K+ E E L+IF+
Sbjct: 1110 FLTLEK-YDLVKYNKKLKNVNSTYIGKISSFYYIDYKSMDMYNKKLNKYTSEIELLKIFA 1168
Query: 217 Q*VQNQNLFI 188
+ +N+FI
Sbjct: 1169 MSEEFKNIFI 1178
>UniRef50_A6VHM2 Cluster: Putative uncharacterized protein; n=1;
Methanococcus maripaludis C7|Rep: Putative
uncharacterized protein - Methanococcus maripaludis C7
Length = 240
Score = 31.5 bits (68), Expect = 6.1
Identities = 23/61 (37%), Positives = 30/61 (49%)
Frame = -3
Query: 358 KHNLLYTNYYVKILFSSYYFIDLSL*AMFTKIV*KHYYENETLQIFSQ*VQNQNLFIIMH 179
K NL YVK +F + FI A+ T I+ HYY E LQ F LF+I++
Sbjct: 12 KSNLPKNVDYVKRIFELFKFIFSIYLAVLTAILTAHYYFKENLQDFYL-FTGIFLFVILY 70
Query: 178 V 176
V
Sbjct: 71 V 71
>UniRef50_UPI00006CFB79 Cluster: hypothetical protein
TTHERM_00486320; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00486320 - Tetrahymena
thermophila SB210
Length = 250
Score = 31.1 bits (67), Expect = 8.1
Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = -1
Query: 297 LIYHYRQCLQKSYKNIIMKMKHYKFFLNKYKIKTFLLLCM--FNM 169
++Y + + Y+ I MK Y+F +Y+++ + LC+ FNM
Sbjct: 200 MLYQKTTEILEKYQKIFMKTPQYEFLFRRYQMQNQICLCLQDFNM 244
>UniRef50_Q8IFP1 Cluster: U5 small nuclear ribonucleoprotein-specific
protein, putative; n=6; cellular organisms|Rep: U5 small
nuclear ribonucleoprotein-specific protein, putative -
Plasmodium falciparum (isolate 3D7)
Length = 2874
Score = 31.1 bits (67), Expect = 8.1
Identities = 19/57 (33%), Positives = 33/57 (57%)
Frame = -3
Query: 358 KHNLLYTNYYVKILFSSYYFIDLSL*AMFTKIV*KHYYENETLQIFSQ*VQNQNLFI 188
K N + + Y KI SSYY++D ++ K + K+ E + L+IF+ + +N+FI
Sbjct: 1373 KLNTVSSTYIGKI--SSYYYVDYKSIDIYNKKLNKYTNEIDLLKIFTMSNEFKNIFI 1427
>UniRef50_Q8IAV6 Cluster: Putative uncharacterized protein PF08_0089;
n=2; Plasmodium|Rep: Putative uncharacterized protein
PF08_0089 - Plasmodium falciparum (isolate 3D7)
Length = 2651
Score = 31.1 bits (67), Expect = 8.1
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = -3
Query: 373 FYFCIKHNLLYTNYYVKILFSSYYFIDLSL*AMFTKIV*KHYYENETLQIFS 218
F++ K N N ++ +L SY I + + + YY+N+TLQIFS
Sbjct: 2484 FFYNKKENAFLLNMFISLLVDSYIEIQNLSRDILSSVF--CYYDNKTLQIFS 2533
>UniRef50_Q4UEP5 Cluster: Isoleucyl-trna synthetase, putative; n=2;
Theileria|Rep: Isoleucyl-trna synthetase, putative -
Theileria annulata
Length = 1241
Score = 31.1 bits (67), Expect = 8.1
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = -1
Query: 285 YRQCLQKSYKNIIMKMKHYKFFLNKYKI 202
Y++ +K + NI+ + K YK+ LN +KI
Sbjct: 109 YQKLFEKRFLNILKETKRYKYLLNHFKI 136
>UniRef50_Q09F14 Cluster: Heme maturase; n=1; Tetrahymena
pigmentosa|Rep: Heme maturase - Tetrahymena pigmentosa
Length = 522
Score = 31.1 bits (67), Expect = 8.1
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +2
Query: 152 KHFCTCILNMHNNKKVLILYLLRKNL*CFIFIIMFLYDFCKH 277
K+F T L ++NN K + +YLL N +IF I + C +
Sbjct: 475 KYFLTYWLELYNNNKYIYIYLLLLNY-IYIFYIYIYMNICNN 515
>UniRef50_A0E2L0 Cluster: Chromosome undetermined scaffold_75, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_75,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 379
Score = 31.1 bits (67), Expect = 8.1
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -1
Query: 315 FLLTTLLIYHYRQCLQKSYKNIIMKMKHYKFFLNKYK 205
FL+ T+L+Y C+Q +YK M +F+ N Y+
Sbjct: 204 FLIITVLLYSMAICIQNNYKISFYAMTDKQFYYNFYQ 240
>UniRef50_A0BG11 Cluster: Chromosome undetermined scaffold_105,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_105,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1034
Score = 31.1 bits (67), Expect = 8.1
Identities = 15/51 (29%), Positives = 29/51 (56%)
Frame = +1
Query: 205 FVLIEKKFVMFHFHNNVFIRFL*TLPIMINQ*SSKKKIIFLHNNLYIVNCV 357
F +E++F+++ + ++IRF + I NQ S K L + +Y++N V
Sbjct: 804 FNQVEEEFLLYKLKSIIYIRFYDLISIQDNQLSGKIVGFQLQHKIYVLNIV 854
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 355,797,570
Number of Sequences: 1657284
Number of extensions: 7222966
Number of successful extensions: 16616
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 15584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16605
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 16503508437
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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