Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc7m18
         (702 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    25   0.60 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      25   0.60 
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      25   0.60 
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   5.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   7.4  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   9.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   9.7  

>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 14/44 (31%), Positives = 16/44 (36%)
 Frame = +3

Query: 279 PLDDLPPPYSSVVGTTHYGFVAPALSNPIPDSVGAYPPAKPFTP 410
           PL   PPPY    GT+     A    NP   +    P   P  P
Sbjct: 202 PLQPFPPPYPFYPGTSAM-LAAYQRYNPYLQAASMLPKPTPLVP 244


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 19/64 (29%), Positives = 25/64 (39%), Gaps = 1/64 (1%)
 Frame = +3

Query: 243 GIIMSTHQGPSAPLDDLPPPYSSVVGTTHYGFVAPALSNPIPDSVG-AYPPAKPFTPPGV 419
           G+  + H G + P         S     H G     L +    S+G   PP  PF P G 
Sbjct: 113 GLAPTGHPGAALPFFCHNGDPLSQPPPAHMGIPPYQLDSKTAGSMGLTRPPMYPF-PAGQ 171

Query: 420 YPHP 431
           YP+P
Sbjct: 172 YPYP 175


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 19/64 (29%), Positives = 25/64 (39%), Gaps = 1/64 (1%)
 Frame = +3

Query: 243 GIIMSTHQGPSAPLDDLPPPYSSVVGTTHYGFVAPALSNPIPDSVG-AYPPAKPFTPPGV 419
           G+  + H G + P         S     H G     L +    S+G   PP  PF P G 
Sbjct: 5   GLAPTGHPGAALPFFCHNGDPLSQPPPAHMGIPPYQLDSKTAGSMGLTRPPMYPF-PAGQ 63

Query: 420 YPHP 431
           YP+P
Sbjct: 64  YPYP 67


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = +1

Query: 127 LK*TKYCTFLV-FFIKLGVIQFLFI*LKKVLN 219
           LK  KYC F++ F++ + VI   +  L +  N
Sbjct: 316 LKTNKYCNFIILFYLSVFVILVYYASLDETPN 347


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +1

Query: 13  LECIVLSVLSVNYLLIVYCQLL 78
           +  IV SV    YL+  YC +L
Sbjct: 490 IHLIVRSVFVTTYLMFDYCTVL 511


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +1

Query: 151  FLVFFIKLGVIQF 189
            FL+FF  L VIQF
Sbjct: 1287 FLIFFALLMVIQF 1299


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +1

Query: 151  FLVFFIKLGVIQF 189
            FL+FF  L VIQF
Sbjct: 1287 FLIFFALLMVIQF 1299


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,618
Number of Sequences: 336
Number of extensions: 3498
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)