Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc7m18
(702 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066 36 0.031
05_04_0051 + 17511696-17512526 33 0.17
01_07_0082 - 40965947-40967023 33 0.29
01_06_1678 - 39095986-39096205,39096400-39096477,39096578-390969... 33 0.29
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 32 0.38
02_01_0522 + 3779404-3779439,3779594-3779709,3780120-3780327,378... 32 0.51
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 31 0.67
06_01_0486 - 3455030-3455770 31 0.67
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866... 31 1.2
03_01_0164 - 1326002-1326409,1326410-1326428,1326523-1326647,132... 30 1.5
05_01_0142 - 940421-940701,941262-941574 30 2.0
12_02_1174 - 26696869-26698191 29 2.7
12_02_0378 + 18349089-18350402,18351109-18351155,18351266-18351368 29 2.7
12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27... 29 2.7
11_06_0610 - 25449085-25453284 29 2.7
09_06_0099 - 20854828-20855117,20855231-20855423,20855507-208556... 29 3.6
07_03_0982 + 23116343-23117089,23117227-23117313,23117424-231175... 29 3.6
03_03_0008 - 13674602-13674708,13675272-13675439,13676169-136767... 29 3.6
01_07_0276 - 42435975-42436301 29 3.6
11_06_0453 + 23781803-23781814,23782700-23782781,23783334-23784160 29 4.7
06_03_1310 + 29238644-29240260 29 4.7
04_04_1222 - 31848892-31849347 29 4.7
03_03_0160 + 14957139-14957603,14958054-14958113,14959012-14959776 29 4.7
01_06_1682 - 39130696-39131705,39132355-39132583 29 4.7
01_01_0070 - 542603-542686,542803-543441 29 4.7
11_01_0613 + 4904869-4905126,4905389-4906138,4907708-4907767 28 6.2
03_01_0515 - 3864796-3865425 28 6.2
12_01_0829 + 7674416-7674471,7675043-7675129,7675210-7675250,767... 28 8.3
12_01_0493 + 3917257-3917769,3917842-3918067,3918460-3918527,391... 28 8.3
10_02_0157 - 5954439-5954801,5956244-5956270,5956465-5956526,595... 28 8.3
09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817 28 8.3
02_04_0534 + 23725051-23726253 28 8.3
01_05_0166 + 18844468-18845184,18847394-18847690 28 8.3
>04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066
Length = 646
Score = 35.9 bits (79), Expect = 0.031
Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 6/64 (9%)
Frame = +3
Query: 294 PPPYSSVV----GTTHYGFV--APALSNPIPDSVGAYPPAKPFTPPGVYPHPEGVTNATV 455
PPPY+S G++ Y AP + P P V PP P PPG P +G N
Sbjct: 439 PPPYASYPPPPPGSSMYNPPPPAPGQATPPPYGVQYAPPPAPIPPPGTAPSTDGAQNYPP 498
Query: 456 NMQP 467
+ P
Sbjct: 499 GVTP 502
>05_04_0051 + 17511696-17512526
Length = 276
Score = 33.5 bits (73), Expect = 0.17
Identities = 20/58 (34%), Positives = 27/58 (46%)
Frame = +3
Query: 258 THQGPSAPLDDLPPPYSSVVGTTHYGFVAPALSNPIPDSVGAYPPAKPFTPPGVYPHP 431
T GPS P+D + PP S + AP SNPI D +G P + + G + P
Sbjct: 177 TAPGPSNPIDPIGPPPSDEIYNRGGHHTAPGPSNPI-DPIGPPPSDEIYNRGGHHTTP 233
Score = 33.1 bits (72), Expect = 0.22
Identities = 20/58 (34%), Positives = 27/58 (46%)
Frame = +3
Query: 258 THQGPSAPLDDLPPPYSSVVGTTHYGFVAPALSNPIPDSVGAYPPAKPFTPPGVYPHP 431
T GPS P+D + PP S + AP SNPI D +G P + + G + P
Sbjct: 150 TAPGPSDPIDPIGPPPSDEIYNHGGHHTAPGPSNPI-DPIGPPPSDEIYNRGGHHTAP 206
Score = 31.1 bits (67), Expect = 0.89
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +3
Query: 258 THQGPSAPLDDLPPPYSSVVGTTHYGFVAPALSNPIPDSVGAYP 389
T GPS P+D + PP + + AP SNPI D +G P
Sbjct: 231 TTPGPSDPIDPIGPPPNDEIYNRGGHHTAPGPSNPI-DPIGPPP 273
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = +3
Query: 258 THQGPSAPLDDLPPPYSSVVGTTHYGFVAPALSNPIPDSVGAYPPAKPFTPPGVYPHP 431
T GPS P+D + PP S + P S+PI D +G P + + G + P
Sbjct: 204 TAPGPSNPIDPIGPPPSDEIYNRGGHHTTPGPSDPI-DPIGPPPNDEIYNRGGHHTAP 260
>01_07_0082 - 40965947-40967023
Length = 358
Score = 32.7 bits (71), Expect = 0.29
Identities = 23/75 (30%), Positives = 31/75 (41%), Gaps = 7/75 (9%)
Frame = +3
Query: 270 PSAPLDDLPPPYSSVVGTTHYGFVAPALSNPIPDSVGAYPPAKPFTPPG-------VYPH 428
PSA PP S+ T Y P + + AYPP + PPG YP
Sbjct: 162 PSAAAAAAYPPQSTYPPPTAY----PTAAKADGSAAAAYPPQSAYPPPGKGNEPSTAYPP 217
Query: 429 PEGVTNATVNMQPSR 473
P G AT + +P++
Sbjct: 218 PAGYPPATGSSKPAK 232
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = +3
Query: 330 YGFVAPALSNP-IPDSVGAYPPAKPFTPPGVYP 425
YG PA + P + AYPP + PP YP
Sbjct: 151 YGQAPPAPAYPPSAAAAAAYPPQSTYPPPTAYP 183
>01_06_1678 -
39095986-39096205,39096400-39096477,39096578-39096949,
39097374-39097671,39097867-39098077,39098331-39099023
Length = 623
Score = 32.7 bits (71), Expect = 0.29
Identities = 17/64 (26%), Positives = 29/64 (45%)
Frame = +3
Query: 222 TKNFCCTGIIMSTHQGPSAPLDDLPPPYSSVVGTTHYGFVAPALSNPIPDSVGAYPPAKP 401
T + +++S ++ PPP SS +T AP +P+P+ + +PP P
Sbjct: 31 TTSLILISVVVSRAHHSASSSSSSPPPSSSA--STAAPLPAPPTPSPVPEHLHHHPPPPP 88
Query: 402 FTPP 413
PP
Sbjct: 89 PVPP 92
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 32.3 bits (70), Expect = 0.38
Identities = 21/57 (36%), Positives = 23/57 (40%)
Frame = +3
Query: 267 GPSAPLDDLPPPYSSVVGTTHYGFVAPALSNPIPDSVGAYPPAKPFTPPGVYPHPEG 437
GPSAP LPPP + + P P P G PA P PP P P G
Sbjct: 726 GPSAPAPPLPPPLPAAANKRN-----PPAPPPPPLMTGKKAPAPP-PPPPQAPKPPG 776
>02_01_0522 +
3779404-3779439,3779594-3779709,3780120-3780327,
3781446-3781611,3781713-3781842,3782496-3782619,
3782794-3782844,3783140-3783262,3783504-3783602,
3783680-3783790,3783868-3783957,3784035-3784175,
3787913-3788116,3788154-3788290,3788429-3788662,
3789535-3789829,3789963-3790017,3790144-3790245,
3790581-3790669,3790807-3790899
Length = 867
Score = 31.9 bits (69), Expect = 0.51
Identities = 19/67 (28%), Positives = 35/67 (52%)
Frame = +3
Query: 30 KCTFRKLSSHCLLSIVRRVIVGFTAKEKLIN*SKVN*ILHLSRFFHKTGSHSVFIHLIEE 209
K ++K+ CLL ++RR +V F + LIN K+ +L + F +++HLI++
Sbjct: 524 KGIYKKIDELCLLCMIRRSVVLFCVIQNLINCLKIGCLL---KPFKGRFIPPIWMHLIKD 580
Query: 210 SVKLTKN 230
+ N
Sbjct: 581 VISYMSN 587
>11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 31.5 bits (68), Expect = 0.67
Identities = 22/52 (42%), Positives = 22/52 (42%)
Frame = +3
Query: 276 APLDDLPPPYSSVVGTTHYGFVAPALSNPIPDSVGAYPPAKPFTPPGVYPHP 431
AP PPP S T A ALS P P GA PP P PG P P
Sbjct: 898 APRVPRPPPAPSATANT-----ASALSPPPPRPPGAPPPPPPPGKPGGPPPP 944
>06_01_0486 - 3455030-3455770
Length = 246
Score = 31.5 bits (68), Expect = 0.67
Identities = 19/56 (33%), Positives = 23/56 (41%), Gaps = 2/56 (3%)
Frame = +3
Query: 270 PSAPLDDLPPPYSSVVGTTHYGFVAPALSNPIPDSVGAY--PPAKPFTPPGVYPHP 431
P P PPP V + +V P + P P V Y PP P+ PP P P
Sbjct: 78 PYTPPTPRPPPTPPYVPSPP-PYVPPYIPPPTPPYVPPYIPPPTPPYVPPPTPPSP 132
>09_06_0277 -
21983049-21983080,21983250-21984788,21986619-21986655,
21987612-21987665,21987781-21987893,21988272-21988660,
21988783-21988903,21989245-21989342,21989963-21990153
Length = 857
Score = 30.7 bits (66), Expect = 1.2
Identities = 21/66 (31%), Positives = 27/66 (40%)
Frame = +3
Query: 270 PSAPLDDLPPPYSSVVGTTHYGFVAPALSNPIPDSVGAYPPAKPFTPPGVYPHPEGVTNA 449
P +P LPP + T P P PD + PP+ PP VYP P VT +
Sbjct: 383 PMSPSCLLPPIIPAPTFTYSSPPPPPLYYPPPPDISPSPPPSVTPLPPVVYPSPPEVTPS 442
Query: 450 TVNMQP 467
+ P
Sbjct: 443 PPEIAP 448
>03_01_0164 -
1326002-1326409,1326410-1326428,1326523-1326647,
1327482-1327530,1328834-1328855,1328969-1329071
Length = 241
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 378 GAYPPAKPFTPPGVYPHPEG 437
GAYPP + PPG YP P+G
Sbjct: 212 GAYPPPGSYPPPGSYP-PQG 230
Score = 29.5 bits (63), Expect = 2.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 378 GAYPPAKPFTPPGVYPHPEG 437
G+YPP + P G YP P+G
Sbjct: 218 GSYPPPGSYPPQGSYPPPQG 237
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/51 (33%), Positives = 20/51 (39%)
Frame = +3
Query: 270 PSAPLDDLPPPYSSVVGTTHYGFVAPALSNPIPDSVGAYPPAKPFTPPGVY 422
P+ P PP G G P S P P G+YPP + PP Y
Sbjct: 191 PAPPAQGYPPAAYPPAGYPQGGAYPPPGSYPPP---GSYPPQGSYPPPQGY 238
>05_01_0142 - 940421-940701,941262-941574
Length = 197
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +3
Query: 366 PDSVGAYPPAKPFTPPGVYPHPEG 437
P GAYPP + PG YP P G
Sbjct: 62 PPPPGAYPPQHGYPQPGGYPPPGG 85
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/47 (40%), Positives = 22/47 (46%)
Frame = +3
Query: 297 PPYSSVVGTTHYGFVAPALSNPIPDSVGAYPPAKPFTPPGVYPHPEG 437
PP+ G G+ P + P P GAYPP PPG YP P G
Sbjct: 30 PPHQ---GYPPQGYPPPPGAYPPPP--GAYPP-----PPGAYPPPPG 66
>12_02_1174 - 26696869-26698191
Length = 440
Score = 29.5 bits (63), Expect = 2.7
Identities = 21/64 (32%), Positives = 24/64 (37%), Gaps = 1/64 (1%)
Frame = +3
Query: 279 PLDDLPPPYSSVVGTTHYGFVAPALSNPIPDSVGAYPP-AKPFTPPGVYPHPEGVTNATV 455
P L PP T V P + P P PP + P PP V P G T A V
Sbjct: 181 PPPSLQPPSPPPPPPTRPPSVKPPVVQPKPQPPPTLPPPSPPPPPPTVPPRTPGDTPAVV 240
Query: 456 NMQP 467
+P
Sbjct: 241 EPKP 244
>12_02_0378 + 18349089-18350402,18351109-18351155,18351266-18351368
Length = 487
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = +3
Query: 294 PPPYSSVVGTTHYGFVAPALSNPIPDSVGAYPPAKPFTPPGVYP 425
PPP + G + + + S+P P A PP K PP P
Sbjct: 8 PPPLCPLCGHPAASYTSSSSSSPSPSQPTARPPLKRKAPPEAPP 51
>12_01_0033 -
272848-272943,274026-274169,274264-274375,274521-274702,
274781-274912,275038-276330,279841-280545,280649-280695,
280787-280865
Length = 929
Score = 29.5 bits (63), Expect = 2.7
Identities = 21/52 (40%), Positives = 21/52 (40%)
Frame = +3
Query: 276 APLDDLPPPYSSVVGTTHYGFVAPALSNPIPDSVGAYPPAKPFTPPGVYPHP 431
AP PPP S T A AL P P GA PP P PG P P
Sbjct: 593 APRVPRPPPAPSATANT-----ASALPPPPPRPPGAPPPPPPPGKPGGPPPP 639
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Frame = +3
Query: 270 PSAPLDDLPPPYSSVVGTTHYGFVAPAL-SNPIPDSVGAYPPA-KPFTPP 413
P AP+ PPP S+ P + S P P V PPA KP PP
Sbjct: 1266 PPAPVSLPPPPVKSLPPPAPVSLPPPVVKSLPPPAPVSLPPPAVKPLPPP 1315
>09_06_0099 -
20854828-20855117,20855231-20855423,20855507-20855668,
20856384-20856497
Length = 252
Score = 29.1 bits (62), Expect = 3.6
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2
Query: 425 GVNSWRSKWFSRWICS 378
GVNSW+S+W S +CS
Sbjct: 114 GVNSWKSEWNSYGVCS 129
>07_03_0982 +
23116343-23117089,23117227-23117313,23117424-23117555,
23118135-23118269,23118644-23118709,23118797-23118907,
23119237-23119329,23119555-23119659,23119752-23119829
Length = 517
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/61 (27%), Positives = 20/61 (32%)
Frame = +3
Query: 288 DLPPPYSSVVGTTHYGFVAPALSNPIPDSVGAYPPAKPFTPPGVYPHPEGVTNATVNMQP 467
D PP S Y AP +NP P YPP P Y +P P
Sbjct: 59 DQPPSAPSYAPPPQYAGYAPPYNNPNP---APYPPESSPAPAPYYSYPPTAAGVATQHAP 115
Query: 468 S 470
+
Sbjct: 116 A 116
>03_03_0008 - 13674602-13674708,13675272-13675439,13676169-13676787,
13676868-13677330,13677855-13678036,13678093-13678235,
13678315-13678423,13679000-13679456,13680490-13682473,
13682507-13682626,13682920-13682971
Length = 1467
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = +3
Query: 351 LSNPIPDSVGAYPPAKPFTPPGVYPHPEGVTNATVNMQ 464
L P+PD PP P +PP V P P T +Q
Sbjct: 1114 LGPPLPDDRPPSPPPLPSSPPPVPPPPPAPITQTGQLQ 1151
>01_07_0276 - 42435975-42436301
Length = 108
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +3
Query: 156 RFFHKTGSHSVFIHLIEESVKLTKNFCCTGIIMSTHQGPSAPLDD 290
R H G+ +VF+ ++ V L+ FCC G++ G S PL++
Sbjct: 51 RSHHGHGALAVFLLVLSVFVFLSVCFCCIGLVQLAIHG-SLPLEE 94
>11_06_0453 + 23781803-23781814,23782700-23782781,23783334-23784160
Length = 306
Score = 28.7 bits (61), Expect = 4.7
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = +3
Query: 270 PSAPLDDLPPPYSSVVGTTHYGFVAPALSNPIPDSVGAYPPA--KPFTPPGVYPHPEGVT 443
P +P LPPP ++ G + P P PP +P TPP V P P+ T
Sbjct: 89 PDSPPPSLPPPVNT--GKKKWKKDKRKEIPPPPPLAETPPPMNERPPTPPPVQPPPDRET 146
Query: 444 NATV 455
+A V
Sbjct: 147 SAMV 150
>06_03_1310 + 29238644-29240260
Length = 538
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Frame = +3
Query: 294 PPPYSSVVGTTHYGFVAPALSNPIPDSV----GAYPPAKPFTPP-GVYPHPEG 437
PP SS T H G+V P L+ P P + A P P +PP + P+G
Sbjct: 438 PPSSSSSPPTEHPGYVLPPLTPPPPTTTPPGHHAPVPGTPSSPPSSSWSPPQG 490
>04_04_1222 - 31848892-31849347
Length = 151
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/63 (30%), Positives = 25/63 (39%), Gaps = 3/63 (4%)
Frame = +3
Query: 255 STHQGPSAPLDDLPPPYSSVVGTTHYGFVAPALSNPIPDSVGAYPPAKPFTPPG---VYP 425
S Q P+ + PP SS + F P+P GA P +P PP P
Sbjct: 29 SQAQAPALLQAAMQPPSSSSQASAAALFQGAPARRPLPPRFGADGPLRPTPPPRRRLGLP 88
Query: 426 HPE 434
HP+
Sbjct: 89 HPQ 91
>03_03_0160 + 14957139-14957603,14958054-14958113,14959012-14959776
Length = 429
Score = 28.7 bits (61), Expect = 4.7
Identities = 21/56 (37%), Positives = 24/56 (42%)
Frame = +3
Query: 270 PSAPLDDLPPPYSSVVGTTHYGFVAPALSNPIPDSVGAYPPAKPFTPPGVYPHPEG 437
P P PP S G G PA+ IP GA+ P P + PGV P P G
Sbjct: 198 PPTPRGFPPPLPSPGAGAPRGGSATPAM---IPGHPGAFYPFPPPSLPGVGP-PRG 249
>01_06_1682 - 39130696-39131705,39132355-39132583
Length = 412
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +3
Query: 294 PPPYSSVVGTTHYGFVAPALS-NPIPDSVGAYPPAKPFTPP 413
PPPY S +Y PA +P P + G+ PP ++PP
Sbjct: 309 PPPYKSPPIPPYYFNSPPANHYSPPPYNFGSSPPTYQYSPP 349
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/57 (28%), Positives = 21/57 (36%)
Frame = +3
Query: 261 HQGPSAPLDDLPPPYSSVVGTTHYGFVAPALSNPIPDSVGAYPPAKPFTPPGVYPHP 431
++ P P PPP++ +H P S P PP PP Y HP
Sbjct: 203 YKSPPLPNQFSPPPFNKFPPPSHQYPSPPQSSYHSPPPYQYTPPNSYQAPPTSYNHP 259
>01_01_0070 - 542603-542686,542803-543441
Length = 240
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = +3
Query: 270 PSAPLDDLPPPYSSVVGTTHYGFVAPALSNPIPDSVGAYPPAKPFTPPGVYPHP 431
P+AP P P + T VAPA + P+ +V P P TP P P
Sbjct: 42 PTAPAKSPPAPATPAPTATPTPPVAPAKAPPVAPAVAPVTPPPP-TPKKAPPPP 94
>11_01_0613 + 4904869-4905126,4905389-4906138,4907708-4907767
Length = 355
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = -3
Query: 457 FTVAFVTPSGWG*TPGGVNGLAGGY 383
F VAF P G+G GG LAG Y
Sbjct: 148 FAVAFSPPGGYGGDGGGAPALAGQY 172
>03_01_0515 - 3864796-3865425
Length = 209
Score = 28.3 bits (60), Expect = 6.2
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 4/52 (7%)
Frame = +3
Query: 270 PSAPLDDLPPPYS---SVVGTTHYGFVAPALSNPIPD-SVGAYPPAKPFTPP 413
PS P + PPP + SV + P + P P SV + PP P PP
Sbjct: 40 PSPPTEASPPPLAPPPSVTSSPPPPAAGPLMPPPPPPPSVTSSPPPPPLPPP 91
>12_01_0829 +
7674416-7674471,7675043-7675129,7675210-7675250,
7675433-7675755
Length = 168
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -2
Query: 431 GMGVNSWRSKWFSRWICSYR-IRDRIT*CRSHKAI 330
G+GV +WRS W R + R RD + C H+ +
Sbjct: 120 GVGVGAWRSCWHPRRVDVLRDRRDDLRACELHRLV 154
>12_01_0493 +
3917257-3917769,3917842-3918067,3918460-3918527,
3919251-3919574,3919691-3920128
Length = 522
Score = 27.9 bits (59), Expect = 8.3
Identities = 23/79 (29%), Positives = 34/79 (43%)
Frame = -3
Query: 448 AFVTPSGWG*TPGGVNGLAGGYAPTESGIGLLSAGATKP*CVVPTTDEYGGGRSSSGALG 269
A + G G G + G G A ES G +AG +PT ++ GG +SSG
Sbjct: 421 ADMADGGLGVMDGDMEGGNGVGAGCESVAGASAAGPVSG-NFIPTVNDIAGGSTSSGKRK 479
Query: 268 P*WVDIIMPVQQKFLVNLT 212
++ + FL N+T
Sbjct: 480 R--TPVVTEEEGAFLTNMT 496
>10_02_0157 -
5954439-5954801,5956244-5956270,5956465-5956526,
5956971-5957592
Length = 357
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/50 (30%), Positives = 18/50 (36%)
Frame = +3
Query: 264 QGPSAPLDDLPPPYSSVVGTTHYGFVAPALSNPIPDSVGAYPPAKPFTPP 413
Q P P +PP + P + P P V PP P TPP
Sbjct: 22 QRPGMPPAVVPPSLPTTTPPAPTVVAPPLPTTPPPAVVAPSPPLPPLTPP 71
>09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817
Length = 883
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +3
Query: 273 SAPLDDLPPPYSSVVGTTHY--GFVAPALSNPIPDSVGA 383
+AP D+PP ++ TTHY G+ +LS+ +P + A
Sbjct: 469 TAPPADVPPGFTVSPTTTHYSFGYGGASLSSAMPRAAAA 507
>02_04_0534 + 23725051-23726253
Length = 400
Score = 27.9 bits (59), Expect = 8.3
Identities = 19/54 (35%), Positives = 22/54 (40%)
Frame = +3
Query: 270 PSAPLDDLPPPYSSVVGTTHYGFVAPALSNPIPDSVGAYPPAKPFTPPGVYPHP 431
P+APL PPP S T YG P + P SV P G +P P
Sbjct: 64 PAAPLAPAPPPDSPRTPHT-YGSFLPIYGDLPPLSVTVVQETLPLPEGGDHPVP 116
>01_05_0166 + 18844468-18845184,18847394-18847690
Length = 337
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/52 (28%), Positives = 23/52 (44%)
Frame = +3
Query: 246 IIMSTHQGPSAPLDDLPPPYSSVVGTTHYGFVAPALSNPIPDSVGAYPPAKP 401
++ ++ P AP PPP + + TT PAL + Y PA+P
Sbjct: 19 VLRNSRPAPKAPAAQPPPPPTLPIETTTSTSFQPALVAVQSTVMEEYDPARP 70
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,127,454
Number of Sequences: 37544
Number of extensions: 363704
Number of successful extensions: 1441
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1245
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1415
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1803843684
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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