Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc7m07
         (641 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    29   0.025
S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subu...    22   3.7  
AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450 ...    22   4.9  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   6.5  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   6.5  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   8.6  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   8.6  

>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 29.5 bits (63), Expect = 0.025
 Identities = 17/51 (33%), Positives = 30/51 (58%)
 Frame = -3

Query: 282 VMERNLSCPAVSQSCSLILVPSWISMILAKKSTPTVGSDSSANFPSVKYLS 130
           ++  NL   ++SQ  +L   P+ +S+ LA  S PTV  + + N  S++YL+
Sbjct: 447 LLHLNLDNVSLSQVPALS-TPNLLSLSLAFNSLPTVALEVAGNISSLRYLN 496


>S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subunit
           protein.
          Length = 141

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -3

Query: 234 LILVPSWISMILAKKSTP 181
           LI++ SW+S  L + +TP
Sbjct: 80  LIVIISWVSFWLNRNATP 97


>AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -3

Query: 153 FPSVKYLSREL 121
           +PSV Y+SREL
Sbjct: 59  YPSVHYISREL 69


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +2

Query: 320 VYDVSNRSSFEHIPLW 367
           VYD S  +S   +P+W
Sbjct: 314 VYDASITASLGRVPIW 329


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +2

Query: 320 VYDVSNRSSFEHIPLW 367
           VYD S  +S   +P+W
Sbjct: 321 VYDASITASLGRVPIW 336


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 91  KPELIIKYRIDHFL 50
           KP+LI  Y I HF+
Sbjct: 296 KPDLIPNYYIAHFI 309


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = +2

Query: 29  Y*IECTIKKMVDPIFDYQFRLILIGDSTVGKSSL 130
           Y I  T+ +MV+ IF +   LIL    T   SSL
Sbjct: 210 YRILTTMMEMVNDIFGWTLILILAKCITSSLSSL 243


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,474
Number of Sequences: 336
Number of extensions: 3157
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16448590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)