Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc7m07
(641 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 159 3e-40
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 155 5e-39
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 148 8e-37
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 137 1e-33
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 132 4e-32
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 123 2e-29
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 116 4e-27
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 100 4e-22
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 93 3e-20
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 89 5e-19
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 85 8e-18
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 83 3e-17
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 80 3e-16
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 77 2e-15
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 77 2e-15
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 73 3e-14
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 73 5e-14
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 58 1e-09
SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomy... 48 9e-07
SPAC22F3.05c |alp41||ADP-ribosylation factor Alp41|Schizosacchar... 46 6e-06
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 42 8e-05
SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces ... 36 0.007
SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3 |Schizosacc... 29 0.75
SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma... 27 1.7
SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces p... 27 1.7
SPCC4B3.07 |||nuclear pore associated protein|Schizosaccharomyce... 27 2.3
SPCC550.04c |gpi2||pig-C|Schizosaccharomyces pombe|chr 3|||Manual 26 4.0
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 26 5.3
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 26 5.3
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 26 5.3
SPBC16G5.02c |||ribokinase |Schizosaccharomyces pombe|chr 2|||Ma... 26 5.3
SPBP4H10.04 |ppb1||calcineurin catalytic subunit Ppb1|Schizosacc... 26 5.3
SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr 1|... 25 7.0
SPAC20G4.01 ||SPAC22F8.13|CCR4-Not complex subunit Caf16|Schizos... 25 7.0
SPAC688.11 |end4|sla2|Huntingtin-interacting protein homolog|Sch... 25 7.0
SPCC1840.08c |||protein disulfide isomerase |Schizosaccharomyces... 25 9.3
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 159 bits (386), Expect = 3e-40
Identities = 85/176 (48%), Positives = 116/176 (65%)
Frame = +2
Query: 71 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWD 250
+DY F+ +LIGDS VGKS+LL FT +F S T+GV+F R I + D +IK Q+WD
Sbjct: 7 YDYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNI-VLDNKKIKAQIWD 65
Query: 251 TAGQERFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRPVFALVGCK 430
TAGQER+R+IT +YYR +VGAL+VYD++ +SSF+++ W+ E + H + + V LVG K
Sbjct: 66 TAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSN-IVIMLVGNK 124
Query: 431 LDLVGSDNKSESRREVSCEEARLFAEENGLHHIETSAKTGLNVEQAFVLVAQEVYQ 598
DL+ R VS EEA+ FA EN L IETSA NVE+AF V E+++
Sbjct: 125 TDLL-------HLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEIFR 173
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 155 bits (376), Expect = 5e-39
Identities = 78/180 (43%), Positives = 119/180 (66%)
Frame = +2
Query: 71 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWD 250
+DY +L+LIGDS VGKS LL F++ F T+G+DF R IE+ DG RIKLQ+WD
Sbjct: 6 YDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIEL-DGKRIKLQIWD 64
Query: 251 TAGQERFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRPVFALVGCK 430
TAGQERFR+IT +YYR ++G LL+YDV+++ SF+++ W ++H + V+ +
Sbjct: 65 TAGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASEN--VYKI---- 118
Query: 431 LDLVGSDNKSESRREVSCEEARLFAEENGLHHIETSAKTGLNVEQAFVLVAQEVYQPNPD 610
L+G+ E +R+VS E+ + A+E G+ +E SAKT +NV++AF +A+E+ + D
Sbjct: 119 --LIGNKCDCEDQRQVSFEQGQALADELGVKFLEASAKTNVNVDEAFFTLAREIKKQKID 176
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 148 bits (358), Expect = 8e-37
Identities = 76/178 (42%), Positives = 113/178 (63%)
Frame = +2
Query: 59 VDPIFDYQFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKL 238
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R E++ G +KL
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELE-GKTVKL 59
Query: 239 QLWDTAGQERFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRPVFAL 418
Q+WDTAGQERFR+IT SYYR + G ++VYDV+++ SF ++ W+ E R +A+
Sbjct: 60 QIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDR--------YAV 111
Query: 419 VGCKLDLVGSDNKSESRREVSCEEARLFAEENGLHHIETSAKTGLNVEQAFVLVAQEV 592
G LVG+ + ++ V A+ FA+ + +ETSAK NVEQAF+ +++++
Sbjct: 112 EGVNRLLVGNKSDMVDKKVVEYSVAKEFADSLNIPFLETSAKDSTNVEQAFLTMSRQI 169
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 137 bits (331), Expect = 1e-33
Identities = 75/178 (42%), Positives = 108/178 (60%), Gaps = 4/178 (2%)
Frame = +2
Query: 71 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGT---RIKLQ 241
+DY +++L G S GKS LL+ F ++ + TVG+DF +RII + G RIKLQ
Sbjct: 6 YDYLVKIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIKLQ 65
Query: 242 LWDTAGQERFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRPVFALV 421
+WDTAGQE+FRS+ ++YYR + GA+LVYDV+N+ SFE + W+ + R + P L
Sbjct: 66 IWDTAGQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEELSSWLSDI-RAMAPSTICVVLA 124
Query: 422 GCKLDLVGSDNKSESRREVSCEEARLFAEENGLHHI-ETSAKTGLNVEQAFVLVAQEV 592
G K DL +++R+VS EEA F E + ETS+ TG NVE+ F+ V +
Sbjct: 125 GSKSDL-------QNQRQVSTEEAAEFCSEKHISSAHETSSYTGSNVEECFLSVVSTI 175
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 132 bits (319), Expect = 4e-32
Identities = 68/169 (40%), Positives = 102/169 (60%)
Frame = +2
Query: 86 RLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAGQE 265
+L+L+GDS VGKSSL+ F +F + + T+G F + + I + T +KL++WDTAGQE
Sbjct: 16 KLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIWDTAGQE 75
Query: 266 RFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRPVFALVGCKLDLVG 445
R++S+ YYRN+ A++VYD++ +S E W+ E +R P V AL G KLDL
Sbjct: 76 RYKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKELQRQ-APEGIVIALAGNKLDL-- 132
Query: 446 SDNKSESRREVSCEEARLFAEENGLHHIETSAKTGLNVEQAFVLVAQEV 592
++ RR V +A +A E L ETSAKT NV + F +A+++
Sbjct: 133 ----AQERRAVEKADAEAYAAEANLLFFETSAKTAENVNELFTAIAKKL 177
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 123 bits (297), Expect = 2e-29
Identities = 68/169 (40%), Positives = 104/169 (61%)
Frame = +2
Query: 80 QFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAG 259
+F+L+ +G+ +VGK+SL+ F +F T+G+DF ++ + ++D T ++LQLWDTAG
Sbjct: 11 KFKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAG 69
Query: 260 QERFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRPVFALVGCKLDL 439
QERFRS+ SY R+S A++VYD++N +SF + W +E R + LVG K DL
Sbjct: 70 QERFRSLIPSYIRDSSVAIIVYDITNHNSFVNTEKW-IEDVRAERGDDVIIVLVGNKTDL 128
Query: 440 VGSDNKSESRREVSCEEARLFAEENGLHHIETSAKTGLNVEQAFVLVAQ 586
+R+V+ EE A+E + H+ETSAK G NV+ F +AQ
Sbjct: 129 A-------DKRQVTQEEGEKKAKELKIMHMETSAKAGHNVKLLFRKIAQ 170
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 116 bits (278), Expect = 4e-27
Identities = 65/171 (38%), Positives = 102/171 (59%), Gaps = 4/171 (2%)
Frame = +2
Query: 86 RLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAGQE 265
++I++G+S VGK+S++ + + KF++ T+G DF + + + D + LQLWDTAGQE
Sbjct: 10 KVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKV-VTLQLWDTAGQE 68
Query: 266 RFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRP---VFALVGCKLD 436
RF+S+ ++YR + +LVYDV+N SFE + W E P P F L+G K+D
Sbjct: 69 RFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPSNPETFPFILLGNKVD 128
Query: 437 LVGSDNKSESRREVSCEEARLFAEENG-LHHIETSAKTGLNVEQAFVLVAQ 586
+ E +R VS +A F + G + + ETSAK +NV++AF VA+
Sbjct: 129 V------EEQKRMVSKSKALAFCQARGEIPYFETSAKEAINVQEAFETVAK 173
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 99.5 bits (237), Expect = 4e-22
Identities = 56/171 (32%), Positives = 92/171 (53%), Gaps = 4/171 (2%)
Frame = +2
Query: 86 RLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAGQE 265
+++++GDS VGK+ L+ F + KF+ T+G DF + + + D + LQLWDTAGQE
Sbjct: 10 KVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKL-VTLQLWDTAGQE 68
Query: 266 RFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRPVFALVGCKLDLVG 445
RF+S+ ++YR + ++VY+V+N SF+ + W E F + +VG
Sbjct: 69 RFQSLGMAFYRGADCCVIVYNVNNSKSFDSVENWRQEFLYQTSQDECAFPFI-----IVG 123
Query: 446 SD-NKSESRREVSCEEARLFAEE---NGLHHIETSAKTGLNVEQAFVLVAQ 586
+ +K S+R VS A + + + + H E SAK NV F V++
Sbjct: 124 NQIDKDASKRAVSLHRALDYCKSKHGSNMIHFEASAKENTNVTDLFETVSR 174
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 93.1 bits (221), Expect = 3e-20
Identities = 60/175 (34%), Positives = 93/175 (53%)
Frame = +2
Query: 80 QFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAG 259
+++L+++GD VGKS+L F + DPT+ D + + EI DG L + DTAG
Sbjct: 8 EYKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIE-DSYRKKCEI-DGEGALLDVLDTAG 65
Query: 260 QERFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRPVFALVGCKLDL 439
QE + ++ + Y R G LLVY++++RSSF+ I + + R + LV K DL
Sbjct: 66 QEEYSAMREQYMRTGEGFLLVYNITSRSSFDEISTFYQQILRVKDKDTFPVVLVANKCDL 125
Query: 440 VGSDNKSESRREVSCEEARLFAEENGLHHIETSAKTGLNVEQAFVLVAQEVYQPN 604
E+ R VS E A+ ++ETSAK LNVE+AF + + + + N
Sbjct: 126 -------EAERVVSRAEGEQLAKSMHCLYVETSAKLRLNVEEAFYSLVRTIRRYN 173
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 89.0 bits (211), Expect = 5e-19
Identities = 55/177 (31%), Positives = 90/177 (50%), Gaps = 3/177 (1%)
Frame = +2
Query: 86 RLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAGQE 265
+++++GD GK+SLL FT G F ++ +PT+ ++ I DG I+L LWDTAGQE
Sbjct: 15 KIVILGDGAAGKTSLLNVFTKGYFPQVYEPTIFENYIHDIFV--DGNSIELSLWDTAGQE 72
Query: 266 RFRSITKSYYRNSVGALLVYDVSNRSSFEH-IPLWMMEAKRHIEPHRPVFALVGCKLDLV 442
+ + Y ++ ++ + V +R S E+ I W+ E + + V LV K DL
Sbjct: 73 EYDQLRSLSYSDTHVIMICFAVDSRDSLENVITKWLPEVSSNCPGVKLV--LVALKCDLR 130
Query: 443 GSDNKSESRREVSCEEARLFAEE--NGLHHIETSAKTGLNVEQAFVLVAQEVYQPNP 607
G+D + ++ E L A + N + ++E SAK V +AF A+ P
Sbjct: 131 GADEEQVDHSKIIDYEEGLAAAKKINAVRYLECSAKLNRGVNEAFTEAARVALAAQP 187
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 85.0 bits (201), Expect = 8e-18
Identities = 57/174 (32%), Positives = 94/174 (54%), Gaps = 7/174 (4%)
Frame = +2
Query: 86 RLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAGQE 265
+L+++GD GK+ LL F+ G F E+ PTV ++ A + E+ DG I+L LWDTAGQE
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADV-EV-DGRHIELALWDTAGQE 65
Query: 266 RFRSITKSYYRNSVGALLVYDVSNRSSFEHI-PLWMMEAKRHIEPHRPVFALVGCKLDLV 442
+ + Y +S L+ + V S +++ W+ E H + P+ LVGCK+DL
Sbjct: 66 DYDRLRPLSYPDSHVVLICFSVDAPESLDNVQEKWISEV-LHFCSNLPIL-LVGCKVDLR 123
Query: 443 GSDNKSE-----SRREVSCEEARLFAEENGLH-HIETSAKTGLNVEQAFVLVAQ 586
E S++ ++ EE ++ A++ G + ++E SAK V + F A+
Sbjct: 124 NDPKTIEELSKTSQKPITFEEGQVVAQKIGAYKYLECSAKLNEGVNEVFETAAR 177
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 83.4 bits (197), Expect = 3e-17
Identities = 49/167 (29%), Positives = 91/167 (54%)
Frame = +2
Query: 95 LIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAGQERFR 274
+IGDS++GK+SL+ + G F E S T+GV+F + I I++ T I +WD GQ F
Sbjct: 15 MIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRN-TEITFSIWDLGGQREFV 73
Query: 275 SITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRPVFALVGCKLDLVGSDN 454
++ ++V L ++D+S +S+ I W +A+ + P+ L+G K D +
Sbjct: 74 NMLPMVCNDAVAILFMFDLSRKSTLNSIKEWYRQARGFNKTAVPI--LIGTKYDHFMTFP 131
Query: 455 KSESRREVSCEEARLFAEENGLHHIETSAKTGLNVEQAFVLVAQEVY 595
+ E + E++ ++AR +A+ + S +NV++ F +V +V+
Sbjct: 132 R-EDQEEIT-KQARRYAKAMKASLVFCSTSHSINVQKIFKIVLAKVF 176
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 79.8 bits (188), Expect = 3e-16
Identities = 54/169 (31%), Positives = 90/169 (53%), Gaps = 7/169 (4%)
Frame = +2
Query: 86 RLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAGQE 265
+L+++GD GK+ LL F+ G F E+ PTV ++ A + E+ DG ++L LWDTAGQE
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADV-EV-DGRHVELALWDTAGQE 65
Query: 266 RFRSITKSYYRNSVGALLVYDVSNRSSFEHI-PLWMMEAKRHIEPHRPVFALVGCKLDL- 439
+ + Y +S L+ + V + S +++ W+ E H P+ LV CK DL
Sbjct: 66 DYDRLRPLSYPDSHVILICFAVDSPDSLDNVQEKWISEV-LHFCSSLPIL-LVACKADLR 123
Query: 440 ----VGSDNKSESRREVSCEEARLFAEENGLH-HIETSAKTGLNVEQAF 571
+ + ++ V+ EE + A++ G + ++E SAKT V + F
Sbjct: 124 NDPKIIEELSKTNQHPVTTEEGQAVAQKIGAYKYLECSAKTNEGVREVF 172
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 77.4 bits (182), Expect = 2e-15
Identities = 55/170 (32%), Positives = 82/170 (48%), Gaps = 6/170 (3%)
Frame = +2
Query: 86 RLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAGQE 265
+L+++GD GK+ LL F+ G F E PTV ++ I + I+L LWDTAGQE
Sbjct: 16 KLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIELALWDTAGQE 75
Query: 266 RFRSITKSYYRNSVGALLVYDVSNRSSFEHI-PLWMMEAKRHIEPHRPVFALVGCKLDLV 442
+ + Y NS LL + + +S ++ W E +H P P+ LVG K DL
Sbjct: 76 EYDRLRPLSYPNSNVILLCFSIDCPASLNNVTEKWYPEV-QHFCPRTPI-VLVGLKADLR 133
Query: 443 GSDNKSESRR-----EVSCEEARLFAEENGLHHIETSAKTGLNVEQAFVL 577
N +E R V+ ++A+ A ++E SAK V + F L
Sbjct: 134 KDRNATEVLRTQGLTPVTYQQAQSVALSMNAPYVECSAKENTGVNEVFQL 183
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 77.0 bits (181), Expect = 2e-15
Identities = 51/175 (29%), Positives = 91/175 (52%), Gaps = 1/175 (0%)
Frame = +2
Query: 83 FRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAGQ 262
F+L+L+GD GK++ +K G+F + T+GV+ G I +WDTAGQ
Sbjct: 10 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFG-EICFNVWDTAGQ 68
Query: 263 ERFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRPVFALVGCKLDLV 442
E+ + YY ++++DV++R +++++P W + R E + P+ L G K+D+
Sbjct: 69 EKLGGLRDGYYIQGQCGIIMFDVTSRITYKNVPHWWRDLVRVCE-NIPI-VLCGNKVDV- 125
Query: 443 GSDNKSESRREVSCEEARLFAEENGLHHIETSAKTGLNVEQAFVLVAQE-VYQPN 604
R+V +A F + L + + SAK+ N E+ F+ +A++ V PN
Sbjct: 126 -------KERKVKA-KAITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLVGNPN 172
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 73.3 bits (172), Expect = 3e-14
Identities = 53/168 (31%), Positives = 82/168 (48%), Gaps = 6/168 (3%)
Frame = +2
Query: 86 RLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAGQE 265
+L+++GD GK+SLL FT G F PTV ++ + DG ++L LWDTAGQE
Sbjct: 10 KLVVVGDGACGKTSLLSVFTLGYFPTEYVPTVFENYVSDCRV--DGKSVQLALWDTAGQE 67
Query: 266 RFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRPVFALVGCKLDLVG 445
+ + Y + L+ + + + S E++ +E + P+ P F LVG K DL
Sbjct: 68 EYERLRPMSYAKAHIILVGFAIDSPDSLENVSTKWIEEINTLCPNVP-FILVGMKADLRS 126
Query: 446 SDNKSESRRE-----VSCEEARLFAEENGLH-HIETSAKTGLNVEQAF 571
E R V ++A L A+ G ++E S+ TG V+ F
Sbjct: 127 DPVAIEEMRRRNQNFVKSQQAELVAQRIGARKYMECSSLTGDGVDDVF 174
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 72.5 bits (170), Expect = 5e-14
Identities = 52/175 (29%), Positives = 86/175 (49%), Gaps = 1/175 (0%)
Frame = +2
Query: 86 RLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAGQE 265
R+ ++G +VGKSSL + + F E PT+ + F++ I+ + G ++ DTAGQ+
Sbjct: 8 RIAVLGSRSVGKSSLTVQYVENHFVESYYPTIE-NTFSKNIKYK-GQEFATEIIDTAGQD 65
Query: 266 RFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRPVFALVGCKLDLVG 445
+ + + G +LVY ++++SSFE + + + H +VG K DL
Sbjct: 66 EYSILNSKHSIGIHGYVLVYSITSKSSFEMVKIVRDKILNHTGTEWVPIVVVGNKSDL-- 123
Query: 446 SDNKSESRREVSCEEARLFAEENGLHHIETSAKTGLNVEQAFVLVAQEV-YQPNP 607
+R V+ EE + A E E SA+ NV +AF L+ E+ Q NP
Sbjct: 124 -----HMQRAVTAEEGKALANEWKCAWTEASARHNENVARAFELIISEIEKQANP 173
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 57.6 bits (133), Expect = 1e-09
Identities = 50/169 (29%), Positives = 82/169 (48%), Gaps = 7/169 (4%)
Frame = +2
Query: 86 RLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAGQE 265
+ +++GD VGK+ LL +T KF PTV D +A + I D L L+DTAGQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSDYVPTV-FDNYAVTVMIGD-EPYTLGLFDTAGQE 62
Query: 266 RFRSITKSYYRNSVGALLVYDVSNRSSFEHI-PLWMMEAKRHIEPHRPVFALVGCKLDL- 439
+ + Y + L+ + V++ +SFE++ W E H P P +VG ++DL
Sbjct: 63 DYDRLRPLSYPQTDVFLVCFSVTSPASFENVKEKWFPEVHHHC-PGVPCL-IVGTQIDLR 120
Query: 440 ----VGSDNKSESRREVSCEEARLFAEENG-LHHIETSAKTGLNVEQAF 571
V + + ++ E+ A E G + ++E SA T ++ F
Sbjct: 121 DDPSVQQKLARQHQHPLTHEQGERLARELGAVKYVECSALTQKGLKNVF 169
>SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 180
Score = 48.4 bits (110), Expect = 9e-07
Identities = 31/141 (21%), Positives = 64/141 (45%), Gaps = 1/141 (0%)
Frame = +2
Query: 44 TIKKMVDPIFDY-QFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQD 220
+I K+ +F + R++++G GK+++L G+ + PT+G + +E +
Sbjct: 4 SISKLFQSLFGKREMRILMVGLDAAGKTTILYKLKLGEIVT-TIPTIGFN-----VETVE 57
Query: 221 GTRIKLQLWDTAGQERFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPH 400
I +WD GQ++ R + + Y++N+ G + V D ++R + E
Sbjct: 58 YRNISFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRERISEAHEELQRMLNEDELR 117
Query: 401 RPVFALVGCKLDLVGSDNKSE 463
+ + K DL + N +E
Sbjct: 118 DALLLVFANKQDLPNAMNAAE 138
>SPAC22F3.05c |alp41||ADP-ribosylation factor
Alp41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 186
Score = 45.6 bits (103), Expect = 6e-06
Identities = 38/171 (22%), Positives = 79/171 (46%)
Frame = +2
Query: 80 QFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAG 259
+ R++L+G GK+++LK + E+S PT G F R +E++ ++ +WD G
Sbjct: 16 EVRVLLLGLDNAGKTTILKCLLNEDVNEVS-PTFG--FQIRTLEVEG---LRFTIWDIGG 69
Query: 260 QERFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRPVFALVGCKLDL 439
Q+ R+ K+Y+ ++ + V D + E + E + ++ K D+
Sbjct: 70 QKTLRNFWKNYFESTEAIIWVVDSLDDLRLEECRNTLQELLVEEKLLFTSILVLANKSDV 129
Query: 440 VGSDNKSESRREVSCEEARLFAEENGLHHIETSAKTGLNVEQAFVLVAQEV 592
G+ + E + ++ + + + SA TGLN++ A +A ++
Sbjct: 130 SGALSSEEISKILNISKYK----SSHWRIFSVSALTGLNIKDAISWLANDL 176
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 41.9 bits (94), Expect = 8e-05
Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Frame = +2
Query: 80 QFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAG 259
+ R++++G GK+++L Y + ++ PTVG + +E IK +WD G
Sbjct: 21 EMRILMLGLDAAGKTTIL-YKLKLNQSVVTIPTVGFN-----VETVTYKNIKFNVWDVGG 74
Query: 260 QERFRSITKSYYRNSVGALLVYDV--SNRSS 346
Q++ R + + Y+ + G + V D SNR S
Sbjct: 75 QDKIRPLWRHYFTGTKGLIFVVDSADSNRIS 105
>SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 308
Score = 35.5 bits (78), Expect = 0.007
Identities = 37/147 (25%), Positives = 64/147 (43%), Gaps = 10/147 (6%)
Frame = +2
Query: 86 RLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAGQE 265
+++L+G S GKSS+ + + +G ++ + L LWD GQE
Sbjct: 4 KVLLMGRSGSGKSSM-RSIVFSNYVAKDTRRLGATIDIEHSHVRFLGNLVLNLWDCGGQE 62
Query: 266 RFR----SITKSY-YRNSVGALLVYDVSNRSSFEHIPLW--MMEAKRHIEPHRPVFALVG 424
F S + + +RN + V+DV +R + + +EA P VF L+
Sbjct: 63 AFMENYLSAQRDHIFRNVQVLIYVFDVESREFERDLVTFRNCLEATVANSPQARVFCLIH 122
Query: 425 CKLDLVGSDNKS---ESRREVSCEEAR 496
K+DLV D + E R+ + E ++
Sbjct: 123 -KMDLVQEDLRDLVFEERKAILLETSK 148
>SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 732
Score = 28.7 bits (61), Expect = 0.75
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +3
Query: 189 ISSLESSR-SKMEQGLNYNSGTRLDRRDSVPSRNRIIETPLELCWCTTSRTDPVSNI 356
+++ E +R S+ + +N T ++ P +R +ETP TDPVSN+
Sbjct: 8 LNNKEHNRASEKKNSRTHNKKTNRNQSKEKPVSSRSVETPKNAVCLEPVGTDPVSNV 64
>SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 630
Score = 27.5 bits (58), Expect = 1.7
Identities = 45/190 (23%), Positives = 73/190 (38%), Gaps = 12/190 (6%)
Frame = +2
Query: 80 QFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEI----QDGTRIKLQLW 247
+ R+++ GD VGKSSL+ D + II I + L L
Sbjct: 3 EVRVVICGDQGVGKSSLISALIQ------EDNVTSIPKVFPIISIPSNPDSNDDVSLVLV 56
Query: 248 DTAGQERFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRPVFALVGC 427
DT R + + + LVY S+ S+E + ++ + P F +G
Sbjct: 57 DTQSDSNEREYLAAEIKKANVICLVY--SDNYSYERVSIFWL----------PYFRSLGV 104
Query: 428 KLDLVGSDNKSE---SRREVSCEEARLFAEENGLHHIET----SAKTGLNVEQAFVLV-A 583
+ +V +NKSE + + + E + N IE SA +NV + F + A
Sbjct: 105 NVPIVLCENKSEDLDNYQGLHTIEHEMIPLINEFKEIEACILCSALEKINVNELFYMCRA 164
Query: 584 QEVYQPNPDW 613
+Y P W
Sbjct: 165 CVIYPITPLW 174
>SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 464
Score = 27.5 bits (58), Expect = 1.7
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +2
Query: 89 LILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDG-TRIKLQLWDTAG 259
LI++G+S++GK++ + F P +DF + DG + L + DT G
Sbjct: 121 LIVVGESSLGKTTFVNSFLQSNDTNFR-PKKTMDFVEHKATLSDGDQKFNLTIVDTPG 177
>SPCC4B3.07 |||nuclear pore associated protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 393
Score = 27.1 bits (57), Expect = 2.3
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -1
Query: 464 IHSCYHFRLGRAYSQPMRTLVCEVLCASWLPSSI 363
I S Y F+ G +S+ VC ++ A WL S +
Sbjct: 237 ILSSYLFQFGDQFSEAFLLDVCSIITALWLKSVV 270
>SPCC550.04c |gpi2||pig-C|Schizosaccharomyces pombe|chr 3|||Manual
Length = 324
Score = 26.2 bits (55), Expect = 4.0
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 269 FRSITKSYYRNSVGALLVYDVSNRSSFEHIPLW 367
F S+ S YRN + LV VSN S+ LW
Sbjct: 92 FASVFVSIYRNQLSCALVGFVSNVSAVAAFILW 124
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 25.8 bits (54), Expect = 5.3
Identities = 20/58 (34%), Positives = 28/58 (48%)
Frame = +2
Query: 155 FAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAGQERFRSITKSYYRNSVGALLVYD 328
FAE++D D + E DGT + L D+ G F S + R + GAL+V D
Sbjct: 78 FAEMTD-----DDMKDMKEPADGTDFLVNLIDSPGHVDFSSEVTAALRVTDGALVVVD 130
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 25.8 bits (54), Expect = 5.3
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 503 AEENGLHHIETSAKTGLNVEQAFVLVAQEVYQPNPD 610
AEE L H+E L+ ++ + A+EVY N D
Sbjct: 54 AEEMALSHLEPQNAVVLHEDKQYYPSAEEVYGSNVD 89
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 25.8 bits (54), Expect = 5.3
Identities = 20/58 (34%), Positives = 28/58 (48%)
Frame = +2
Query: 155 FAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAGQERFRSITKSYYRNSVGALLVYD 328
FAE++D D + E DGT + L D+ G F S + R + GAL+V D
Sbjct: 78 FAEMTD-----DDMKDMKEPADGTDFLVNLIDSPGHVDFSSEVTAALRVTDGALVVVD 130
>SPBC16G5.02c |||ribokinase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 318
Score = 25.8 bits (54), Expect = 5.3
Identities = 19/58 (32%), Positives = 26/58 (44%)
Frame = +2
Query: 416 LVGCKLDLVGSDNKSESRREVSCEEARLFAEENGLHHIETSAKTGLNVEQAFVLVAQE 589
L G K D V DN + + S A + EE G + I S NV+ AFV ++
Sbjct: 77 LSGLKKDGVNVDNVKKIENK-STGVAMIIVEETGENRILLSEGANGNVDTAFVKAMEQ 133
>SPBP4H10.04 |ppb1||calcineurin catalytic subunit
Ppb1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 554
Score = 25.8 bits (54), Expect = 5.3
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -3
Query: 357 ICSKLDLFETSYTNKAPTE 301
ICSK +L+ET APT+
Sbjct: 400 ICSKEELYETDLKESAPTQ 418
>SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1372
Score = 25.4 bits (53), Expect = 7.0
Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 5/90 (5%)
Frame = +2
Query: 230 IKLQLWDTAGQERFRSITKSYYRNSVGALLVYDVSNRSSFE-----HIPLWMMEAKRHIE 394
+KL DTA ++ F T + + +LL ++ N ++FE HI ++ K H
Sbjct: 416 VKLVSLDTANEKHFLKHTPNSAAHQ--SLLNTNMFNDANFEFMVKEHIKNFLKLLKEHNN 473
Query: 395 PHRPVFALVGCKLDLVGSDNKSESRREVSC 484
P R + L L L S ++ C
Sbjct: 474 PVRIIKLLDCLVLTLQADKGNGNSNNDIDC 503
>SPAC20G4.01 ||SPAC22F8.13|CCR4-Not complex subunit
Caf16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 280
Score = 25.4 bits (53), Expect = 7.0
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 86 RLILIGDSTVGKSSLLKYFTDGKFAELSDPTVG 184
R +L+G + GKS+LLK + A+ +VG
Sbjct: 32 RTLLVGANGAGKSTLLKLLSGKSLAKAGHISVG 64
>SPAC688.11 |end4|sla2|Huntingtin-interacting protein
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1092
Score = 25.4 bits (53), Expect = 7.0
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +2
Query: 137 YFTDGKFAELSDPTVGVDFFA-RIIEIQDGTR-IKLQLWDTAGQERFRSITK 286
YF DG A+ S+ GV+ F+ I E+ + + + D G +RF +++
Sbjct: 735 YFADGPNADHSEVINGVNLFSTAIYEVANNAKGLSRTTGDDQGSDRFVGLSR 786
>SPCC1840.08c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 561
Score = 25.0 bits (52), Expect = 9.3
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Frame = -3
Query: 339 LFETSYTNKAPT-EFL*YDFVMERN-LSCPAVSQSCSLILVPSWISMIL 199
+ +T++ A T E L ++F + R + + Q SLIL+ WIS+IL
Sbjct: 476 ILDTTFRVLAITGEGLPHEFSIPRGYVYLSEIKQYSSLILISLWISLIL 524
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,686,281
Number of Sequences: 5004
Number of extensions: 55017
Number of successful extensions: 247
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 221
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 287744314
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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