Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc7m07
(641 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical pr... 220 8e-58
Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical pr... 180 1e-45
U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated p... 179 2e-45
AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family pr... 154 6e-38
Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical pr... 153 1e-37
AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family pr... 153 1e-37
AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein. 153 1e-37
AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family pr... 151 3e-37
Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical pr... 145 3e-35
Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical pr... 142 3e-34
Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical pr... 140 6e-34
AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical... 139 2e-33
U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family prot... 138 2e-33
AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical ... 138 2e-33
U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein. 134 5e-32
U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein. 134 5e-32
U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family pro... 134 5e-32
U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family pro... 134 5e-32
AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein. 134 5e-32
AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical ... 126 1e-29
AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family pr... 126 1e-29
AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein. 126 1e-29
AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein. 126 1e-29
AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical ... 124 7e-29
U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein. 123 1e-28
AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family pr... 123 1e-28
U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like prot... 122 2e-28
U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family prot... 122 3e-28
AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical ... 120 7e-28
Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical pr... 120 9e-28
U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical pr... 120 1e-27
Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical pr... 119 2e-27
U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like prot... 115 3e-26
U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily ass... 115 3e-26
Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical pr... 113 8e-26
Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical pr... 112 2e-25
AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family pr... 108 3e-24
AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical ... 102 2e-22
Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical pr... 91 6e-19
AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical ... 88 4e-18
Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical pr... 88 6e-18
M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein pro... 88 6e-18
Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical pr... 86 2e-17
U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding pro... 86 2e-17
Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical p... 85 3e-17
DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GL... 85 3e-17
U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical pr... 85 4e-17
Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical pr... 84 9e-17
Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical p... 83 1e-16
L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleot... 83 2e-16
AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical ... 83 2e-16
Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical p... 81 7e-16
AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-rela... 81 7e-16
U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding pro... 78 6e-15
U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog ... 78 6e-15
CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical ... 78 6e-15
U68252-1|AAB16967.1| 66|Caenorhabditis elegans rab2-like protein. 77 1e-14
U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein. 77 1e-14
Z78417-3|CAB01691.1| 195|Caenorhabditis elegans Hypothetical pr... 75 3e-14
U82288-1|AAC47729.1| 195|Caenorhabditis elegans Rac-like GTPase... 75 3e-14
X68492-1|CAA48506.1| 191|Caenorhabditis elegans small ras-relat... 74 8e-14
L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein pr... 74 8e-14
L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein pr... 74 8e-14
AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse e... 74 8e-14
AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death a... 74 8e-14
U68260-1|AAB16975.1| 69|Caenorhabditis elegans rab19-like prot... 71 5e-13
U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein. 69 2e-12
U68259-1|AAB16974.1| 69|Caenorhabditis elegans rab14-like prot... 69 3e-12
Z82276-7|CAB05247.2| 195|Caenorhabditis elegans Hypothetical pr... 67 9e-12
U55018-1|AAB40386.1| 195|Caenorhabditis elegans CeRac2 protein. 67 9e-12
CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical ... 63 2e-10
AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical ... 62 2e-10
U23452-10|AAK31543.1| 191|Caenorhabditis elegans Hypothetical p... 59 2e-09
L10078-1|AAA51433.1| 188|Caenorhabditis elegans guanine nucleot... 59 2e-09
U68264-1|AAB16979.1| 66|Caenorhabditis elegans S10-like protein. 59 3e-09
S82771-1|AAC05600.1| 191|Caenorhabditis elegans cdc42 homolog p... 57 1e-08
Z71180-2|CAA94890.1| 207|Caenorhabditis elegans Hypothetical pr... 56 2e-08
U68254-1|AAB16969.1| 67|Caenorhabditis elegans rab6-like protein. 54 1e-07
AL117204-37|CAB55148.2| 248|Caenorhabditis elegans Hypothetical... 54 1e-07
U97592-7|AAB52874.2| 332|Caenorhabditis elegans Sperm-specific ... 52 4e-07
Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical pr... 52 5e-07
Z22178-5|CAA80155.1| 207|Caenorhabditis elegans Hypothetical pr... 51 6e-07
U41276-1|AAA82469.1| 238|Caenorhabditis elegans Hypothetical pr... 50 1e-06
AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylat... 48 4e-06
AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylat... 48 4e-06
Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical pr... 48 6e-06
U68262-1|AAB16977.1| 74|Caenorhabditis elegans RAM1-like protein. 48 6e-06
U68253-1|AAB16968.1| 65|Caenorhabditis elegans rab6-like protein. 48 6e-06
AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G... 48 6e-06
U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylati... 48 8e-06
Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical pr... 47 1e-05
Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical pr... 47 1e-05
AF038608-15|AAC25820.1| 129|Caenorhabditis elegans Cell death a... 47 1e-05
AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical ... 45 5e-05
U66216-1|AAB07465.1| 128|Caenorhabditis elegans RAN/Tc4 protein. 44 1e-04
Z46241-6|CAA86319.1| 190|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical pr... 43 2e-04
U28733-4|AAA68305.2| 125|Caenorhabditis elegans Di-ras/rig/noey... 42 3e-04
U68261-1|AAB16976.1| 53|Caenorhabditis elegans rab19-like prot... 42 4e-04
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 40 0.001
U68263-1|AAB16978.1| 115|Caenorhabditis elegans rab-like protein. 39 0.003
Z49912-5|CAA90136.1| 312|Caenorhabditis elegans Hypothetical pr... 38 0.006
U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylatio... 38 0.008
AL031633-14|CAA21032.1| 903|Caenorhabditis elegans Hypothetical... 37 0.014
U50301-3|AAM29676.1| 370|Caenorhabditis elegans Hypothetical pr... 36 0.019
Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical p... 36 0.025
AC024812-5|AAF59556.1| 191|Caenorhabditis elegans Hypothetical ... 36 0.033
U68255-1|AAB16970.1| 70|Caenorhabditis elegans rab7-like protein. 33 0.13
AL031633-13|CAA21027.1| 951|Caenorhabditis elegans Hypothetical... 33 0.13
AL031633-12|CAA21026.2| 1107|Caenorhabditis elegans Hypothetical... 33 0.13
AJ132700-1|CAA10736.1| 952|Caenorhabditis elegans centaurin gam... 33 0.13
AJ132701-1|CAA10737.1| 1107|Caenorhabditis elegans centaurin gam... 33 0.17
U70855-4|AAB09163.1| 625|Caenorhabditis elegans Hypothetical pr... 32 0.40
AL117200-14|CAJ85779.1| 465|Caenorhabditis elegans Hypothetical... 31 0.93
AL117200-12|CAB60583.1| 461|Caenorhabditis elegans Hypothetical... 31 0.93
AL117200-11|CAD54172.1| 530|Caenorhabditis elegans Hypothetical... 31 0.93
Z78018-7|CAB01449.2| 2577|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z78013-10|CAB01427.2| 2577|Caenorhabditis elegans Hypothetical p... 30 1.6
AY314773-1|AAQ84880.1| 2596|Caenorhabditis elegans flamingo-like... 30 1.6
Z92780-1|CAB07174.1| 1186|Caenorhabditis elegans Hypothetical pr... 29 2.1
AF357878-1|AAK27716.1| 589|Caenorhabditis elegans receptor-medi... 29 2.1
AF357877-1|AAK27715.1| 835|Caenorhabditis elegans receptor-medi... 29 2.1
AF357876-1|AAK27714.1| 576|Caenorhabditis elegans receptor-medi... 29 2.1
AC024853-3|ABP57809.1| 244|Caenorhabditis elegans Hypothetical ... 29 2.1
AC006695-15|AAO25981.1| 555|Caenorhabditis elegans Receptor med... 29 2.1
AC006695-14|AAK73902.2| 576|Caenorhabditis elegans Receptor med... 29 2.1
AC006695-13|AAF39978.1| 786|Caenorhabditis elegans Receptor med... 29 2.1
AC006695-12|AAL65796.1| 613|Caenorhabditis elegans Receptor med... 29 2.1
AC006695-11|AAF39979.1| 835|Caenorhabditis elegans Receptor med... 29 2.1
AC006695-10|AAF39980.1| 589|Caenorhabditis elegans Receptor med... 29 2.1
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 28 4.9
AL032654-8|CAB63390.1| 174|Caenorhabditis elegans Hypothetical ... 28 4.9
U23938-1|AAA65452.1| 35|Caenorhabditis elegans pra-1 protein. 28 6.5
AL031630-10|CAA20990.1| 363|Caenorhabditis elegans Hypothetical... 28 6.5
AL032631-16|CAB63338.2| 156|Caenorhabditis elegans Hypothetical... 27 8.6
>Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical
protein D2013.1 protein.
Length = 229
Score = 220 bits (537), Expect = 8e-58
Identities = 106/179 (59%), Positives = 139/179 (77%), Gaps = 3/179 (1%)
Frame = +2
Query: 65 PIFDYQFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQL 244
P+F YQ+RLI+IGDSTVGKSSLL+YFT+GK AE+SDPTVGVDF+AR+IE++ G R+KLQL
Sbjct: 12 PLFHYQYRLIVIGDSTVGKSSLLRYFTEGKMAEISDPTVGVDFYARMIELRPGYRVKLQL 71
Query: 245 WDTAGQERFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHI---EPHRPVFA 415
WDTAGQE+FRSITKSYYRNSVG L +YD +NR SFEH+ W+ EA ++ P + VF
Sbjct: 72 WDTAGQEKFRSITKSYYRNSVGVLAIYDTTNRESFEHVENWVKEAALNLGGPSPSKCVFQ 131
Query: 416 LVGCKLDLVGSDNKSESRREVSCEEARLFAEENGLHHIETSAKTGLNVEQAFVLVAQEV 592
LVG K D+ +S+R+V+ EE FA+ + + IETS++TG NV +AF ++AQE+
Sbjct: 132 LVGTKSDM-------DSQRQVNYEEGEYFAKYHKMKFIETSSRTGDNVNEAFHMIAQEI 183
>Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical
protein K09A9.2 protein.
Length = 210
Score = 180 bits (437), Expect = 1e-45
Identities = 90/176 (51%), Positives = 122/176 (69%)
Frame = +2
Query: 71 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWD 250
+ Y F+ I+IGD VGKS LL FT+ KF T+GV+F RIIE+ G +IKLQ+WD
Sbjct: 8 YSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVS-GQKIKLQIWD 66
Query: 251 TAGQERFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRPVFALVGCK 430
TAGQERFR++T+SYYR + GAL+VYD++ RS++ H+ W+ +AK P+ +F L+G K
Sbjct: 67 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLADAKSLTNPNTAIF-LIGNK 125
Query: 431 LDLVGSDNKSESRREVSCEEARLFAEENGLHHIETSAKTGLNVEQAFVLVAQEVYQ 598
DL E +R+V EEA+ FAEENGL +E SAKTG NVE AF+ A+++YQ
Sbjct: 126 ADL-------EDQRDVPYEEAKAFAEENGLTFLECSAKTGSNVEDAFLETAKQIYQ 174
>U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated
protein 108 protein.
Length = 214
Score = 179 bits (435), Expect = 2e-45
Identities = 91/176 (51%), Positives = 123/176 (69%)
Frame = +2
Query: 71 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWD 250
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++ I DG +IKLQ+WD
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTI-DGKQIKLQIWD 61
Query: 251 TAGQERFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRPVFALVGCK 430
TAGQE FRSIT+SYYR + GALLVYD++ R +F H+ W+ +A++H + V L+G K
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTSWLEDARQHSNSNM-VIMLIGNK 120
Query: 431 LDLVGSDNKSESRREVSCEEARLFAEENGLHHIETSAKTGLNVEQAFVLVAQEVYQ 598
DL E+RREV EE FA E+GL +ETSAKT NVE+AF+ A+E+Y+
Sbjct: 121 SDL-------EARREVKREEGEAFAREHGLVFMETSAKTAANVEEAFIDTAKEIYR 169
>AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family
protein 11.1 protein.
Length = 211
Score = 154 bits (373), Expect = 6e-38
Identities = 81/179 (45%), Positives = 113/179 (63%)
Frame = +2
Query: 62 DPIFDYQFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQ 241
D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R I ++ G +K Q
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVE-GKTVKAQ 63
Query: 242 LWDTAGQERFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRPVFALV 421
+WDTAGQER+R+IT +YYR +VGALLVYD++ ++E++ W+ E + H + V LV
Sbjct: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHAD-QNIVIMLV 122
Query: 422 GCKLDLVGSDNKSESRREVSCEEARLFAEENGLHHIETSAKTGLNVEQAFVLVAQEVYQ 598
G K DL R V +EA+++AE N L IETSA NVE AF + E+Y+
Sbjct: 123 GNKSDL-------RHLRAVPTDEAKIYAERNQLSFIETSALDSTNVEAAFTNILTEIYK 174
>Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical
protein F11A5.3 protein.
Length = 201
Score = 153 bits (371), Expect = 1e-37
Identities = 78/175 (44%), Positives = 117/175 (66%)
Frame = +2
Query: 74 DYQFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDT 253
D+ F+ ++IGD VGKS+LL FTD F + T+GV+F + ++I D +++L++WDT
Sbjct: 4 DHMFKYVIIGDGGVGKSNLLLRFTDELFDPIHTTTLGVEFGYKDLQI-DKYKVRLRVWDT 62
Query: 254 AGQERFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRPVFALVGCKL 433
GQE FRSI ++YYRN++GALLVYD++ R SF H+ W+ + ++H P V L+G K
Sbjct: 63 CGQENFRSIIRAYYRNALGALLVYDITCRKSFVHLEQWLSDLRQHGHPEM-VIMLIGNKS 121
Query: 434 DLVGSDNKSESRREVSCEEARLFAEENGLHHIETSAKTGLNVEQAFVLVAQEVYQ 598
DL ++ R+V+ EE FA++NGL +ETSAK +VE+AFV A E+Y+
Sbjct: 122 DL-------KAVRDVTTEEGEAFAKKNGLTFMETSAKANKHVEKAFVNTAHEIYK 169
>AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family
protein 8 protein.
Length = 211
Score = 153 bits (370), Expect = 1e-37
Identities = 80/174 (45%), Positives = 114/174 (65%)
Frame = +2
Query: 71 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWD 250
+DY F+L+LIGDS VGK+ +L F+D F T+G+DF R IE+ DG +IKLQ+WD
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIEL-DGKKIKLQIWD 63
Query: 251 TAGQERFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRPVFALVGCK 430
TAGQERFR+IT +YYR ++G +LVYD++N SFE+I W+ R+IE H A +
Sbjct: 64 TAGQERFRTITTAYYRGAMGIILVYDITNERSFENIKNWI----RNIEEH----AASDVE 115
Query: 431 LDLVGSDNKSESRREVSCEEARLFAEENGLHHIETSAKTGLNVEQAFVLVAQEV 592
++G+ E RREVS + A E G +ETSAK LN+++AF +A+++
Sbjct: 116 RMIIGNKCDIEERREVSRDRGEQLAIEYGTKFLETSAKANLNIDEAFFTLARDI 169
>AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein.
Length = 211
Score = 153 bits (370), Expect = 1e-37
Identities = 80/174 (45%), Positives = 114/174 (65%)
Frame = +2
Query: 71 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWD 250
+DY F+L+LIGDS VGK+ +L F+D F T+G+DF R IE+ DG +IKLQ+WD
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIEL-DGKKIKLQIWD 63
Query: 251 TAGQERFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRPVFALVGCK 430
TAGQERFR+IT +YYR ++G +LVYD++N SFE+I W+ R+IE H A +
Sbjct: 64 TAGQERFRTITTAYYRGAMGIILVYDITNERSFENIKNWI----RNIEEH----AASDVE 115
Query: 431 LDLVGSDNKSESRREVSCEEARLFAEENGLHHIETSAKTGLNVEQAFVLVAQEV 592
++G+ E RREVS + A E G +ETSAK LN+++AF +A+++
Sbjct: 116 RMIIGNKCDIEERREVSRDRGEQLAIEYGTKFLETSAKANLNIDEAFFTLARDI 169
>AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family
protein 1 protein.
Length = 205
Score = 151 bits (367), Expect = 3e-37
Identities = 81/178 (45%), Positives = 116/178 (65%)
Frame = +2
Query: 59 VDPIFDYQFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKL 238
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R IE+ DG IKL
Sbjct: 4 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DGKTIKL 62
Query: 239 QLWDTAGQERFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRPVFAL 418
Q+WDTAGQERFR+IT SYYR + G ++VYD++++ +F ++ W+ E R+ + L
Sbjct: 63 QIWDTAGQERFRTITSSYYRGAHGIIVVYDITDQETFNNVKQWLQEIDRYACENVNKL-L 121
Query: 419 VGCKLDLVGSDNKSESRREVSCEEARLFAEENGLHHIETSAKTGLNVEQAFVLVAQEV 592
VG K DL ++R V + A+ +A + G+ +ETSAK+ NVEQAF+ +A E+
Sbjct: 122 VGNKCDLT-------AKRAVETQAAQDYAGQLGIPFLETSAKSSTNVEQAFLTMASEI 172
>Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical
protein F11A5.4 protein.
Length = 203
Score = 145 bits (351), Expect = 3e-35
Identities = 80/175 (45%), Positives = 111/175 (63%)
Frame = +2
Query: 74 DYQFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDT 253
D+ F+ ++IGD VGKS+LL F F + T+G++F R +EI D ++KL +WDT
Sbjct: 4 DHVFKYVIIGDRGVGKSNLLLRFIGKPFDSIHPSTLGIEFGFRNLEI-DRKKVKLHVWDT 62
Query: 254 AGQERFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRPVFALVGCKL 433
GQERFRS+ SYYR+++GALLVYD+++R SF H+ W+ + +R +P V L+G K
Sbjct: 63 CGQERFRSLVGSYYRHAIGALLVYDITSRESFYHLEHWLTDLQRLGDPD-IVIVLIGNKS 121
Query: 434 DLVGSDNKSESRREVSCEEARLFAEENGLHHIETSAKTGLNVEQAFVLVAQEVYQ 598
DL E+ REV EE FA E GL +E SAKT VE+AFV A E+Y+
Sbjct: 122 DL-------EADREVRKEEGEAFAREFGLIFMEISAKTNEYVEEAFVNSAHEIYR 169
>Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical
protein F26H9.6 protein.
Length = 208
Score = 142 bits (343), Expect = 3e-34
Identities = 71/171 (41%), Positives = 108/171 (63%)
Frame = +2
Query: 80 QFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAG 259
QF+L+L+G+S VGKSSL+ F G+F E + T+G F + + + D T IK ++WDTAG
Sbjct: 19 QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDAT-IKFEIWDTAG 77
Query: 260 QERFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRPVFALVGCKLDL 439
QER+ S+ YYR + A++VYD++N+ SF+ W+ E +R P+ V AL G K D+
Sbjct: 78 QERYHSLAPMYYRGAQAAIVVYDITNQESFQKAKNWVKELQRQASPN-IVMALAGNKADV 136
Query: 440 VGSDNKSESRREVSCEEARLFAEENGLHHIETSAKTGLNVEQAFVLVAQEV 592
++R V EEA +AE+N L +ETSAKT +NV F+ +A+++
Sbjct: 137 A-------NKRTVEYEEANAYAEDNALLFMETSAKTSMNVNDIFMAIAKKL 180
>Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical
protein W04G5.2 protein.
Length = 198
Score = 140 bits (340), Expect = 6e-34
Identities = 74/174 (42%), Positives = 105/174 (60%)
Frame = +2
Query: 77 YQFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTA 256
Y F+++LIG+ VGKS+LL FT +F S PT+GV+F +II ++ G +K+Q+WDTA
Sbjct: 7 YLFKIVLIGNPGVGKSNLLSRFTRNEFNLKSKPTIGVEFATKIISVE-GKAVKVQIWDTA 65
Query: 257 GQERFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRPVFALVGCKLD 436
G ERFR SYYR ++GALLVYD+S ++E + W+ + H V LVG
Sbjct: 66 GMERFRCGASSYYRGALGALLVYDISKHKTYESVEQWLKVLRDHAN-EDIVITLVG---- 120
Query: 437 LVGSDNKSESRREVSCEEARLFAEENGLHHIETSAKTGLNVEQAFVLVAQEVYQ 598
NKS+ V +EA+++AE N + IETSA NVE AF + E+Y+
Sbjct: 121 -----NKSDLSHAVPTDEAKIYAERNHISFIETSALDNTNVEAAFTNIVTEIYK 169
>AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical
protein Y47D3A.25 protein.
Length = 209
Score = 139 bits (336), Expect = 2e-33
Identities = 75/174 (43%), Positives = 107/174 (61%)
Frame = +2
Query: 71 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWD 250
+D+ F+L++IGDS VGKSSLL F D F+E T+GVDF R ++I +G R+KLQ+WD
Sbjct: 7 YDHLFKLLIIGDSGVGKSSLLLRFADNTFSENYITTIGVDFKIRTMDI-NGQRVKLQIWD 65
Query: 251 TAGQERFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRPVFALVGCK 430
TAGQERFR+IT +YYR + G ++VYDV+N SF ++ W+ E + + + + V
Sbjct: 66 TAGQERFRTITSTYYRGTHGVVVVYDVTNGESFGNVKRWLQEIENNCDSVQKV------- 118
Query: 431 LDLVGSDNKSESRREVSCEEARLFAEENGLHHIETSAKTGLNVEQAFVLVAQEV 592
LVG+ + RR V +AR +A+ + ETSAK NVE F + V
Sbjct: 119 --LVGNKCEENERRVVLESDARNYAQSMNISFFETSAKEDKNVEPMFTCITSLV 170
>U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family protein
10 protein.
Length = 201
Score = 138 bits (335), Expect = 2e-33
Identities = 76/180 (42%), Positives = 111/180 (61%)
Frame = +2
Query: 71 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWD 250
+D F+L+LIGDS VGK+ +L F+D F T+G+DF + IE++ G +IKLQ+WD
Sbjct: 6 YDMLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELK-GKKIKLQIWD 64
Query: 251 TAGQERFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRPVFALVGCK 430
TAGQERF +IT SYYR ++G +LVYD++N SF++I W+ H V ++G K
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNIDEHAS-EDVVKMILGNK 123
Query: 431 LDLVGSDNKSESRREVSCEEARLFAEENGLHHIETSAKTGLNVEQAFVLVAQEVYQPNPD 610
D+ SD RR VS E A+++G+ ETSAK ++V+ AF +A+ + PD
Sbjct: 124 CDM--SD-----RRVVSRERGEKIAQDHGISFHETSAKLNVHVDTAFYDLAEAILAKMPD 176
>AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical
protein Y62E10A.9 protein.
Length = 210
Score = 138 bits (335), Expect = 2e-33
Identities = 71/175 (40%), Positives = 110/175 (62%), Gaps = 1/175 (0%)
Frame = +2
Query: 62 DPIFDYQFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQ 241
D FDY F+++L+GD VGK+ +++ F +G F + T+GVDF + + + DG R+KLQ
Sbjct: 4 DDGFDYLFKIVLVGDMGVGKTCVVQRFRNGTFVDRQGTTIGVDFTMKTLVV-DGKRVKLQ 62
Query: 242 LWDTAGQERFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRPVFALV 421
+WDT GQERFR+IT+SYYR++ G +L YD++ + SF + W+ + + P+ V L+
Sbjct: 63 IWDTGGQERFRTITQSYYRSANGIVLCYDITCKQSFGSLQRWIDDVSKFAAPN-VVKLLI 121
Query: 422 GCKLDLVGSDNKSESRREVSCEEARLFAEENGLH-HIETSAKTGLNVEQAFVLVA 583
G K DL E +R + EEA + NG+ +ETSAK +NV+ AF+ +A
Sbjct: 122 GTKCDL-------EDQRAIEAEEAEMLQRANGMFAMLETSAKGNVNVDNAFLELA 169
>U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 134 bits (324), Expect = 5e-32
Identities = 70/170 (41%), Positives = 103/170 (60%)
Frame = +2
Query: 62 DPIFDYQFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQ 241
D FDY F+L++IG+S+VGK+S L + D F TVG+DF + + + R+KLQ
Sbjct: 16 DQNFDYMFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTV-FRGDKRVKLQ 74
Query: 242 LWDTAGQERFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRPVFALV 421
+WDTAGQER+R+IT +YYR ++G +L+YD++N SF + W + K + + V LV
Sbjct: 75 IWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQV-VLV 133
Query: 422 GCKLDLVGSDNKSESRREVSCEEARLFAEENGLHHIETSAKTGLNVEQAF 571
G K D+ +S R VS + R A++ GL ETSAK +NV+ F
Sbjct: 134 GNKCDM-------DSERVVSMDRGRQLADQLGLEFFETSAKENINVKAVF 176
>U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 134 bits (324), Expect = 5e-32
Identities = 70/170 (41%), Positives = 103/170 (60%)
Frame = +2
Query: 62 DPIFDYQFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQ 241
D FDY F+L++IG+S+VGK+S L + D F TVG+DF + + + R+KLQ
Sbjct: 16 DQNFDYMFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTV-FRGDKRVKLQ 74
Query: 242 LWDTAGQERFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRPVFALV 421
+WDTAGQER+R+IT +YYR ++G +L+YD++N SF + W + K + + V LV
Sbjct: 75 IWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQV-VLV 133
Query: 422 GCKLDLVGSDNKSESRREVSCEEARLFAEENGLHHIETSAKTGLNVEQAF 571
G K D+ +S R VS + R A++ GL ETSAK +NV+ F
Sbjct: 134 GNKCDM-------DSERVVSMDRGRQLADQLGLEFFETSAKENINVKAVF 176
>U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family
protein 3, isoform b protein.
Length = 219
Score = 134 bits (324), Expect = 5e-32
Identities = 70/170 (41%), Positives = 103/170 (60%)
Frame = +2
Query: 62 DPIFDYQFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQ 241
D FDY F+L++IG+S+VGK+S L + D F TVG+DF + + + R+KLQ
Sbjct: 16 DQNFDYMFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTV-FRGDKRVKLQ 74
Query: 242 LWDTAGQERFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRPVFALV 421
+WDTAGQER+R+IT +YYR ++G +L+YD++N SF + W + K + + V LV
Sbjct: 75 IWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQV-VLV 133
Query: 422 GCKLDLVGSDNKSESRREVSCEEARLFAEENGLHHIETSAKTGLNVEQAF 571
G K D+ +S R VS + R A++ GL ETSAK +NV+ F
Sbjct: 134 GNKCDM-------DSERVVSMDRGRQLADQLGLEFFETSAKENINVKAVF 176
>U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family
protein 3, isoform a protein.
Length = 233
Score = 134 bits (324), Expect = 5e-32
Identities = 70/170 (41%), Positives = 103/170 (60%)
Frame = +2
Query: 62 DPIFDYQFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQ 241
D FDY F+L++IG+S+VGK+S L + D F TVG+DF + + + R+KLQ
Sbjct: 30 DQNFDYMFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTV-FRGDKRVKLQ 88
Query: 242 LWDTAGQERFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRPVFALV 421
+WDTAGQER+R+IT +YYR ++G +L+YD++N SF + W + K + + V LV
Sbjct: 89 IWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQV-VLV 147
Query: 422 GCKLDLVGSDNKSESRREVSCEEARLFAEENGLHHIETSAKTGLNVEQAF 571
G K D+ +S R VS + R A++ GL ETSAK +NV+ F
Sbjct: 148 GNKCDM-------DSERVVSMDRGRQLADQLGLEFFETSAKENINVKAVF 190
>AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein.
Length = 219
Score = 134 bits (324), Expect = 5e-32
Identities = 70/170 (41%), Positives = 103/170 (60%)
Frame = +2
Query: 62 DPIFDYQFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQ 241
D FDY F+L++IG+S+VGK+S L + D F TVG+DF + + + R+KLQ
Sbjct: 16 DQNFDYMFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTV-FRGDKRVKLQ 74
Query: 242 LWDTAGQERFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRPVFALV 421
+WDTAGQER+R+IT +YYR ++G +L+YD++N SF + W + K + + V LV
Sbjct: 75 IWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQV-VLV 133
Query: 422 GCKLDLVGSDNKSESRREVSCEEARLFAEENGLHHIETSAKTGLNVEQAF 571
G K D+ +S R VS + R A++ GL ETSAK +NV+ F
Sbjct: 134 GNKCDM-------DSERVVSMDRGRQLADQLGLEFFETSAKENINVKAVF 176
>AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical
protein Y87G2A.4 protein.
Length = 215
Score = 126 bits (304), Expect = 1e-29
Identities = 68/174 (39%), Positives = 104/174 (59%), Gaps = 8/174 (4%)
Frame = +2
Query: 71 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQD--------GT 226
+DY + + +GDS VGK+S L +TD F TVG+DF + + + G
Sbjct: 4 YDYLIKFLALGDSGVGKTSFLHRYTDNTFTGQFISTVGIDFKEKKVVYKSSRGGFGGRGQ 63
Query: 227 RIKLQLWDTAGQERFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRP 406
R+ LQLWDTAGQERFRS+T +++R+++G +L++D++N SF +I W+ + K H +P
Sbjct: 64 RVLLQLWDTAGQERFRSLTTAFFRDAMGFILIFDITNEQSFLNIRDWLSQLKVHAYCEQP 123
Query: 407 VFALVGCKLDLVGSDNKSESRREVSCEEARLFAEENGLHHIETSAKTGLNVEQA 568
+ G K DL E+RR+VS A+ A++ GL + ETSA T NVE++
Sbjct: 124 DIIICGNKADL-------ENRRQVSTARAKQLADQLGLPYFETSACTSTNVEKS 170
>AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family
protein 37 protein.
Length = 196
Score = 126 bits (304), Expect = 1e-29
Identities = 70/170 (41%), Positives = 108/170 (63%), Gaps = 1/170 (0%)
Frame = +2
Query: 86 RLILIGDSTVGKSSLLKYFTDGKFAELSD-PTVGVDFFARIIEIQDGTRIKLQLWDTAGQ 262
+++L+GDS GK+ LL + DG F + TVG+D+ ++I + D ++KLQ+WDTAGQ
Sbjct: 4 KVMLLGDSCTGKTCLLIRYKDGAFLNNNFISTVGIDYRNKLITMGD-KKVKLQIWDTAGQ 62
Query: 263 ERFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRPVFALVGCKLDLV 442
ERFRS+T SYYR++ LLVYD++NR+SFE+ W+ + K + ++ LV
Sbjct: 63 ERFRSVTTSYYRDADALLLVYDIANRASFENCRNWLSQIKE--------YGKEAVQVTLV 114
Query: 443 GSDNKSESRREVSCEEARLFAEENGLHHIETSAKTGLNVEQAFVLVAQEV 592
G NK + R V +E + AE + +ETSAKTG NV++AF+ +A+ +
Sbjct: 115 G--NKCDLPRAVPTDEGKRLAEAYQIPFMETSAKTGFNVDRAFLGLAERM 162
>AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein.
Length = 196
Score = 126 bits (304), Expect = 1e-29
Identities = 70/170 (41%), Positives = 108/170 (63%), Gaps = 1/170 (0%)
Frame = +2
Query: 86 RLILIGDSTVGKSSLLKYFTDGKFAELSD-PTVGVDFFARIIEIQDGTRIKLQLWDTAGQ 262
+++L+GDS GK+ LL + DG F + TVG+D+ ++I + D ++KLQ+WDTAGQ
Sbjct: 4 KVMLLGDSCTGKTCLLIRYKDGAFLNNNFISTVGIDYRNKLITMGD-KKVKLQIWDTAGQ 62
Query: 263 ERFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRPVFALVGCKLDLV 442
ERFRS+T SYYR++ LLVYD++NR+SFE+ W+ + K + ++ LV
Sbjct: 63 ERFRSVTTSYYRDADALLLVYDIANRASFENCRNWLSQIKE--------YGKEAVQVTLV 114
Query: 443 GSDNKSESRREVSCEEARLFAEENGLHHIETSAKTGLNVEQAFVLVAQEV 592
G NK + R V +E + AE + +ETSAKTG NV++AF+ +A+ +
Sbjct: 115 G--NKCDLPRAVPTDEGKRLAEAYQIPFMETSAKTGFNVDRAFLGLAERM 162
>AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein.
Length = 215
Score = 126 bits (304), Expect = 1e-29
Identities = 68/174 (39%), Positives = 104/174 (59%), Gaps = 8/174 (4%)
Frame = +2
Query: 71 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQD--------GT 226
+DY + + +GDS VGK+S L +TD F TVG+DF + + + G
Sbjct: 4 YDYLIKFLALGDSGVGKTSFLHRYTDNTFTGQFISTVGIDFKEKKVVYKSSRGGFGGRGQ 63
Query: 227 RIKLQLWDTAGQERFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRP 406
R+ LQLWDTAGQERFRS+T +++R+++G +L++D++N SF +I W+ + K H +P
Sbjct: 64 RVLLQLWDTAGQERFRSLTTAFFRDAMGFILIFDITNEQSFLNIRDWLSQLKVHAYCEQP 123
Query: 407 VFALVGCKLDLVGSDNKSESRREVSCEEARLFAEENGLHHIETSAKTGLNVEQA 568
+ G K DL E+RR+VS A+ A++ GL + ETSA T NVE++
Sbjct: 124 DIIICGNKADL-------ENRRQVSTARAKQLADQLGLPYFETSACTSTNVEKS 170
>AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical
protein Y45F3A.2 protein.
Length = 216
Score = 124 bits (298), Expect = 7e-29
Identities = 71/172 (41%), Positives = 106/172 (61%), Gaps = 1/172 (0%)
Frame = +2
Query: 71 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWD 250
+ Y F+++L+G++ VGK+ L++ FT G F T+GVDF + +++ + +IKLQ+WD
Sbjct: 4 YKYLFKVVLVGNAGVGKTCLVRKFTQGIFPPGQSATIGVDFMIKTVKVGND-KIKLQIWD 62
Query: 251 TAGQERFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRPVFALVGCK 430
TAGQERFRSIT+SYYR++ +LVYDVS + SF+ +P W+ E + + R + LVG K
Sbjct: 63 TAGQERFRSITQSYYRSAHAIVLVYDVSCQPSFDCLPEWLGEIESYAN-RRVLKILVGNK 121
Query: 431 LDLVGSDNKSESRREVSCEEARLFAEENGL-HHIETSAKTGLNVEQAFVLVA 583
+D REV R F++ N + +ETSA NV+Q F VA
Sbjct: 122 VD-------KGDEREVPERIGRDFSDVNQFDYFLETSALDATNVDQLFEQVA 166
>U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein.
Length = 123
Score = 123 bits (296), Expect = 1e-28
Identities = 56/106 (52%), Positives = 77/106 (72%)
Frame = +2
Query: 71 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWD 250
+DY F+L+LIGDS VGK+ +L F+D F T+G+DF R IE+ DG +IKLQ+WD
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIEL-DGKKIKLQIWD 63
Query: 251 TAGQERFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRH 388
TAGQERFR+IT +YYR ++G +LVYD++N SFE+I W+ + H
Sbjct: 64 TAGQERFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIEEH 109
>AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family
protein 18, isoform b protein.
Length = 203
Score = 123 bits (296), Expect = 1e-28
Identities = 70/176 (39%), Positives = 100/176 (56%)
Frame = +2
Query: 86 RLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAGQE 265
++++IG+S VGKSSL+ F D F T+GVDF + I DG R+KL +WDTAGQE
Sbjct: 13 KILIIGESGVGKSSLMLRFVDDVFDPEQAATIGVDFRVTSMAI-DGNRVKLAIWDTAGQE 71
Query: 266 RFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRPVFALVGCKLDLVG 445
RFR++T SYYR + G + VYDV++RSSFE + WM E + + +V K+D+
Sbjct: 72 RFRTLTPSYYRGAQGVICVYDVTSRSSFEKLNHWMQEVDTYCTNDNIIKMMVANKIDM-- 129
Query: 446 SDNKSESRREVSCEEARLFAEENGLHHIETSAKTGLNVEQAFVLVAQEVYQPNPDW 613
R V+ EE FA+ + IE SAKT V+ F + +++ Q W
Sbjct: 130 ------PNRVVTREEGLKFAKRHRTLFIEASAKTKEGVQCTFEELIEKIIQTPDLW 179
>U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like
protein.
Length = 127
Score = 122 bits (294), Expect = 2e-28
Identities = 59/125 (47%), Positives = 84/125 (67%)
Frame = +2
Query: 62 DPIFDYQFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQ 241
D +DY F+++LIGDS VGKS+LL FT +F S T+GV+F R I ++ G +K Q
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFHLESKSTIGVEFATRSISVE-GKTVKAQ 63
Query: 242 LWDTAGQERFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRPVFALV 421
+WDTAGQER+R+IT +YYR +VGALLVYD++ ++E++ W+ E + H + V V
Sbjct: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHAD-QNIVIMPV 122
Query: 422 GCKLD 436
G K D
Sbjct: 123 GNKCD 127
>U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family protein
6.2 protein.
Length = 205
Score = 122 bits (293), Expect = 3e-28
Identities = 67/168 (39%), Positives = 103/168 (61%)
Frame = +2
Query: 80 QFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAG 259
+F+L+ +G+ +VGK+SL+ F F T+G+DF ++ + ++D T ++LQLWDTAG
Sbjct: 10 KFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAG 68
Query: 260 QERFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRPVFALVGCKLDL 439
QERFRS+ SY R+S A++VYD++N +SF W+ + + + LVG K DL
Sbjct: 69 QERFRSLIPSYIRDSTVAVVVYDITNSNSFHQTSKWIDDVRTE-RGSDVIIMLVGNKTDL 127
Query: 440 VGSDNKSESRREVSCEEARLFAEENGLHHIETSAKTGLNVEQAFVLVA 583
SD +R+V+ +E A+E + IETSAK G NV+Q F +A
Sbjct: 128 --SD-----KRQVTTDEGERKAKELNVMFIETSAKAGYNVKQLFRRIA 168
>AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical
protein 4R79.2 protein.
Length = 395
Score = 120 bits (290), Expect = 7e-28
Identities = 65/173 (37%), Positives = 97/173 (56%)
Frame = +2
Query: 74 DYQFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDT 253
D F+++ +GDS VGK+ L F +F L + T+GVDF + ++I I +QLWDT
Sbjct: 200 DRIFKVVFVGDSAVGKTCFLHRFCHNRFKPLFNATIGVDFTVKTMKIPPNRAIAMQLWDT 259
Query: 254 AGQERFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRPVFALVGCKL 433
AGQERFRSITK Y+R + G +L++DV++ SF ++ W+ + ++ V LVG K+
Sbjct: 260 AGQERFRSITKQYFRKADGVVLMFDVTSEQSFLNVRNWIDSVRAGVD-DATVMCLVGNKM 318
Query: 434 DLVGSDNKSESRREVSCEEARLFAEENGLHHIETSAKTGLNVEQAFVLVAQEV 592
DL GSD R A A E + ETSA TG ++ +A+ +
Sbjct: 319 DLFGSD----IARSAVYRAAEKLAVEFKIPFFETSAYTGFGIDTCMRQMAENL 367
>Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical
protein F59B2.7 protein.
Length = 205
Score = 120 bits (289), Expect = 9e-28
Identities = 66/168 (39%), Positives = 101/168 (60%)
Frame = +2
Query: 80 QFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAG 259
+F+L+ +G+ +VGK+S++ F F T+G+DF ++ + ++D T I+LQLWDTAG
Sbjct: 11 KFKLVFLGEQSVGKTSIITRFMYDSFDNTYQATIGIDFLSKTMYLEDRT-IRLQLWDTAG 69
Query: 260 QERFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRPVFALVGCKLDL 439
QERFRS+ SY R+S A++VYD++N +SF W+ + R+ + LVG K DL
Sbjct: 70 QERFRSLIPSYIRDSSVAVVVYDITNANSFHQTTKWVDDV-RNERGCDVIIVLVGNKTDL 128
Query: 440 VGSDNKSESRREVSCEEARLFAEENGLHHIETSAKTGLNVEQAFVLVA 583
+R+VS E+ A + + IETSAK G NV+Q F +A
Sbjct: 129 A-------DKRQVSTEDGEKKARDLNVMFIETSAKAGYNVKQLFRKIA 169
>U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical
protein K02E10.1 protein.
Length = 218
Score = 120 bits (288), Expect = 1e-27
Identities = 64/168 (38%), Positives = 100/168 (59%), Gaps = 1/168 (0%)
Frame = +2
Query: 71 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWD 250
+++ F+++++GD GKS +L F + F T+GVDF + I++ +I+L+LWD
Sbjct: 3 YNHLFKIVVVGDHNCGKSCILLRFAENSFRMDHISTLGVDFKLKTIKL-GRDKIRLELWD 61
Query: 251 TAGQERFRSITKSYYRNSVGALLVYDVSNRSSFEHI-PLWMMEAKRHIEPHRPVFALVGC 427
TAG ER+R+I SYY ++ G + VYD++N SFE++ W+ E K+H P+ V LVG
Sbjct: 62 TAGMERYRTIYNSYYHSAHGVMCVYDMTNEKSFENLEKYWLKEIKQHAPPN-AVLMLVGN 120
Query: 428 KLDLVGSDNKSESRREVSCEEARLFAEENGLHHIETSAKTGLNVEQAF 571
K D+ + R+V + A A G+ E SAKTG+N E+AF
Sbjct: 121 KADM-------DQERKVDFDRAEKLASRLGVSLYEVSAKTGINCEEAF 161
>Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical
protein W03C9.3 protein.
Length = 209
Score = 119 bits (286), Expect = 2e-27
Identities = 66/172 (38%), Positives = 104/172 (60%), Gaps = 4/172 (2%)
Frame = +2
Query: 86 RLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAGQE 265
++I++GDS VGK+SL+ + + +F+ T+G DF R + I D T + LQ+WDTAGQE
Sbjct: 11 KVIILGDSGVGKTSLMNQYVNRRFSNQYKATIGADFLTRDVNIDDRT-VTLQIWDTAGQE 69
Query: 266 RFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRP---VFALVGCKLD 436
RF+S+ ++YR + +L +DV+N +SF+ + W E P P F L+G K+D
Sbjct: 70 RFQSLGVAFYRGADCCVLAFDVTNAASFKSLDSWRDEFLIQASPRDPDHFPFVLLGNKVD 129
Query: 437 LVGSDNKSESRREVSCEEARLFAEENG-LHHIETSAKTGLNVEQAFVLVAQE 589
L ES+R VS + A+ + + G + + E SAK LNVE AF+ +A++
Sbjct: 130 L-------ESQRAVSSKRAQSWCQTKGNIPYYEVSAKEALNVEAAFLAIARD 174
>U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like
protein.
Length = 124
Score = 115 bits (276), Expect = 3e-26
Identities = 52/106 (49%), Positives = 74/106 (69%)
Frame = +2
Query: 71 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWD 250
+D F+L+LIGDS VGK+ +L F+D F T+G+DF + IE++ G +IKLQ+WD
Sbjct: 6 YDMLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELK-GKKIKLQIWD 64
Query: 251 TAGQERFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRH 388
TAGQERF +IT SYYR ++G +LVYD++N SF++I W+ H
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNIDEH 110
>U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily
assigned gene nameprotein 312 protein.
Length = 656
Score = 115 bits (276), Expect = 3e-26
Identities = 64/170 (37%), Positives = 96/170 (56%)
Frame = +2
Query: 83 FRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAGQ 262
FR+++ GD+ VGKSS + +F T+GVDF + + + DG + LQLWDTAGQ
Sbjct: 462 FRIVMCGDAAVGKSSFVMRVIRRQFTNQLPSTLGVDFHVKTVNV-DGRNVALQLWDTAGQ 520
Query: 263 ERFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRPVFALVGCKLDLV 442
ERFRS+ KSY+R + GA+LVYDV SF + W+ K E P+ LVG K+D+
Sbjct: 521 ERFRSLCKSYFRRADGAILVYDVCAEQSFLRVRDWIETIKESTERSIPII-LVGNKVDM- 578
Query: 443 GSDNKSESRREVSCEEARLFAEENGLHHIETSAKTGLNVEQAFVLVAQEV 592
+ + V+ + A G+ +ETSA G N++ A + + +E+
Sbjct: 579 ----RISTPGSVAKTDGASMAAAMGVLFMETSALDGSNIDNAMLALTREL 624
>Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical
protein F43D9.2 protein.
Length = 307
Score = 113 bits (273), Expect = 8e-26
Identities = 68/181 (37%), Positives = 104/181 (57%), Gaps = 6/181 (3%)
Frame = +2
Query: 83 FRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAGQ 262
F++I++G++ VGK+ L F G+F E ++ T+GVDF R I++ +++QLWDTAGQ
Sbjct: 101 FKVIIVGNAAVGKTCLSFRFCCGRFPEHTEATIGVDFRERSCVIENEL-LRVQLWDTAGQ 159
Query: 263 ERFR-SITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRH--IEPHRPVFALVGCKL 433
ER+R SI YYRN + VYDV+ R SF + LW+ E ++H + L+G K
Sbjct: 160 ERYRQSIVAHYYRNVNAVVFVYDVTCRESFNDLALWIKECEKHGLVGDSEVPRILIGNKC 219
Query: 434 DLVGSDNKSESRREVSCEEARLFAEENGLHHIETSAKTGL---NVEQAFVLVAQEVYQPN 604
D+ E VS +EA++FA+ N + ETSAK +VE F+ + ++ Q
Sbjct: 220 DV-------ECTNRVSTDEAQMFADRNNMALFETSAKLASEADHVESIFLTLLHKLQQSK 272
Query: 605 P 607
P
Sbjct: 273 P 273
>Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical
protein T01B7.3 protein.
Length = 207
Score = 112 bits (270), Expect = 2e-25
Identities = 57/165 (34%), Positives = 99/165 (60%)
Frame = +2
Query: 77 YQFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTA 256
++F+++L+G+ VGKSSL+ F + KF+ T+ F + + ++D + L +WDTA
Sbjct: 11 FKFKIVLLGEGCVGKSSLVLRFVENKFSCKHLSTIQASFQNKTVNVED-CQADLHIWDTA 69
Query: 257 GQERFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRPVFALVGCKLD 436
GQE++ ++ YYR S G LLV+D+++R SFE + W++E K + + +VG K+D
Sbjct: 70 GQEKYHALGPIYYRGSNGVLLVFDITDRKSFEKVKNWVLEIKTCLGNTAEIL-IVGNKID 128
Query: 437 LVGSDNKSESRREVSCEEARLFAEENGLHHIETSAKTGLNVEQAF 571
L E R+V+ ++A +AE G ++ETSA+ + + AF
Sbjct: 129 L-------EEERQVTRQDAEAYAESEGALYMETSAQDNVGISDAF 166
>AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family
protein 18, isoform a protein.
Length = 193
Score = 108 bits (260), Expect = 3e-24
Identities = 64/167 (38%), Positives = 89/167 (53%), Gaps = 9/167 (5%)
Frame = +2
Query: 140 FTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAGQERFRSITKSYYRNSVGALL 319
F D F T+GVDF + I DG R+KL +WDTAGQERFR++T SYYR + G +
Sbjct: 4 FVDDVFDPEQAATIGVDFRVTSMAI-DGNRVKLAIWDTAGQERFRTLTPSYYRGAQGVIC 62
Query: 320 VYDVSNRSSFEHIPLWMMEAKRHIEPHRPVFALVGCKLDLV---------GSDNKSESRR 472
VYDV++RSSFE + WM E + + +V K+D+V G N + R
Sbjct: 63 VYDVTSRSSFEKLNHWMQEVDTYCTNDNIIKMMVANKIDMVRKSRFCSIFGLKNNFQPNR 122
Query: 473 EVSCEEARLFAEENGLHHIETSAKTGLNVEQAFVLVAQEVYQPNPDW 613
V+ EE FA+ + IE SAKT V+ F + +++ Q W
Sbjct: 123 VVTREEGLKFAKRHRTLFIEASAKTKEGVQCTFEELIEKIIQTPDLW 169
>AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical
protein Y71H2AM.12 protein.
Length = 195
Score = 102 bits (245), Expect = 2e-22
Identities = 66/169 (39%), Positives = 98/169 (57%), Gaps = 3/169 (1%)
Frame = +2
Query: 86 RLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAGQE 265
+++++G+S GK++LL F D F T+G+DF +I+++ DG I+LQLWDTAGQE
Sbjct: 8 KVVVVGESGAGKTALLTCFLDNTFETDPLTTIGIDFKHKIVQLNDGQSIRLQLWDTAGQE 67
Query: 266 RFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRPVFA---LVGCKLD 436
RFR + +Y R++ ALLV D+S+ + EH+ W K I+ ++ F +VG K D
Sbjct: 68 RFRQLAPAYIRSARVALLVIDLSDENCVEHLIRW----KGIIDKNKSDFTSTIIVGNKHD 123
Query: 437 LVGSDNKSESRREVSCEEARLFAEENGLHHIETSAKTGLNVEQAFVLVA 583
LV SE R S + E N +IETSAK N+++ F VA
Sbjct: 124 LV-----SEKR---SPRLTAIIRETND-EYIETSAKMRKNIKKLFSSVA 163
>Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical
protein C27B7.8 protein.
Length = 188
Score = 91.1 bits (216), Expect = 6e-19
Identities = 58/187 (31%), Positives = 99/187 (52%)
Frame = +2
Query: 80 QFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAG 259
+++++++G VGKS+L F G F E DPT+ D + + +E+ DG + L++ DTAG
Sbjct: 3 EYKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIE-DSYRKQVEV-DGQQCMLEILDTAG 60
Query: 260 QERFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRPVFALVGCKLDL 439
E+F ++ Y +N G +LVY ++ +S+F + + R + LVG K DL
Sbjct: 61 TEQFTAMRDLYMKNGQGFVLVYSITAQSTFNDLMDLRDQILRVKDTDEVPMILVGNKCDL 120
Query: 440 VGSDNKSESRREVSCEEARLFAEENGLHHIETSAKTGLNVEQAFVLVAQEVYQPNPDW*V 619
E R V ++ + A + G +ETSAK +NV + F + +++ + P+
Sbjct: 121 -------EDERVVGKDQGQNLARQFGSAFLETSAKAKINVSEVFYDLVRQINRRYPE--- 170
Query: 620 *SGRRMG 640
SGRR G
Sbjct: 171 -SGRRQG 176
>AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical
protein Y11D7A.4 protein.
Length = 248
Score = 88.2 bits (209), Expect = 4e-18
Identities = 56/174 (32%), Positives = 85/174 (48%), Gaps = 1/174 (0%)
Frame = +2
Query: 74 DYQFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDT 253
D +++++GD GK+S+ + F F + T+G+DFF+R I + ++ +Q+WD
Sbjct: 33 DKVIKIVVVGDGASGKTSICQRFAKESFDKSYHQTLGLDFFSRRITLPHEMQVLVQVWDI 92
Query: 254 AGQERFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIE-PHRPVFALVGCK 430
GQ + Y + LVYDV+N SFE+ W+ K++ + PV K
Sbjct: 93 GGQSIAGEMIDKYLTGANIVFLVYDVTNSKSFENAVDWLSVVKKNTKSSETPV------K 146
Query: 431 LDLVGSDNKSESRREVSCEEARLFAEENGLHHIETSAKTGLNVEQAFVLVAQEV 592
L L+G+ E RR VS E + FA N + SAKTG V F EV
Sbjct: 147 LVLMGNKTDLEERRVVSVEAHKNFATSNDMMPTYVSAKTGDTVFLTFRQAVAEV 200
>Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical
protein ZK792.6 protein.
Length = 184
Score = 87.8 bits (208), Expect = 6e-18
Identities = 57/171 (33%), Positives = 94/171 (54%)
Frame = +2
Query: 80 QFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAG 259
+++L+++GD VGKS+L F E DPT+ D + + + I DG L + DTAG
Sbjct: 3 EYKLVVVGDGGVGKSALTIQLIQNHFVEEYDPTIE-DSYRKQVVI-DGETCLLDILDTAG 60
Query: 260 QERFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRPVFALVGCKLDL 439
QE + ++ Y R G LLV+ V+ SFE++ + + +R + LVG K DL
Sbjct: 61 QEEYSAMRDQYMRTGEGFLLVFAVNEAKSFENVANYREQIRRVKDSDDVPMVLVGNKCDL 120
Query: 440 VGSDNKSESRREVSCEEARLFAEENGLHHIETSAKTGLNVEQAFVLVAQEV 592
++S R VS E A+ + G+ +++TSAKT + V++AF + +E+
Sbjct: 121 ---SSRSVDFRTVS-ETAKGY----GIPNVDTSAKTRMGVDEAFYTLVREI 163
>M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein
protein.
Length = 187
Score = 87.8 bits (208), Expect = 6e-18
Identities = 57/171 (33%), Positives = 94/171 (54%)
Frame = +2
Query: 80 QFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAG 259
+++L+++GD VGKS+L F E DPT+ D + + + I DG L + DTAG
Sbjct: 6 EYKLVVVGDGGVGKSALTIQLIQNHFVEEYDPTIE-DSYRKQVVI-DGETCLLDILDTAG 63
Query: 260 QERFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRPVFALVGCKLDL 439
QE + ++ Y R G LLV+ V+ SFE++ + + +R + LVG K DL
Sbjct: 64 QEEYSAMRDQYMRTGEGFLLVFAVNEAKSFENVANYREQIRRVKDSDDVPMVLVGNKCDL 123
Query: 440 VGSDNKSESRREVSCEEARLFAEENGLHHIETSAKTGLNVEQAFVLVAQEV 592
++S R VS E A+ + G+ +++TSAKT + V++AF + +E+
Sbjct: 124 ---SSRSVDFRTVS-ETAKGY----GIPNVDTSAKTRMGVDEAFYTLVREI 166
>Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical
protein F17C8.4 protein.
Length = 211
Score = 86.2 bits (204), Expect = 2e-17
Identities = 61/164 (37%), Positives = 89/164 (54%), Gaps = 1/164 (0%)
Frame = +2
Query: 83 FRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAGQ 262
++L++IGD VGKSSL F +F + DPT+ D + + EI DG + + + DTAGQ
Sbjct: 18 YKLVVIGDGGVGKSSLTIQFFQKQFVDYYDPTIE-DQYIQHCEI-DGNWVIMDVLDTAGQ 75
Query: 263 ERFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRPVFALVGCKLDLV 442
E F ++ + Y R G LLV+ V+ R SFE + R + LV K+DL+
Sbjct: 76 EEFSAMREQYIRGGRGFLLVFSVTERKSFEEAHKLYNQVLRVKDRSEYPVLLVANKVDLI 135
Query: 443 GSDNKSESRREVSCEEARLFAEENGLHHIETSAK-TGLNVEQAF 571
++R VS +E R A + L +IETSAK +NV+ AF
Sbjct: 136 -------NQRVVSEQEGRELAAQLKLMYIETSAKEPPVNVDAAF 172
>U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding
protein protein.
Length = 211
Score = 86.2 bits (204), Expect = 2e-17
Identities = 61/164 (37%), Positives = 89/164 (54%), Gaps = 1/164 (0%)
Frame = +2
Query: 83 FRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAGQ 262
++L++IGD VGKSSL F +F + DPT+ D + + EI DG + + + DTAGQ
Sbjct: 18 YKLVVIGDGGVGKSSLTIQFFQKQFVDYYDPTIE-DQYIQHCEI-DGNWVIMDVLDTAGQ 75
Query: 263 ERFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRPVFALVGCKLDLV 442
E F ++ + Y R G LLV+ V+ R SFE + R + LV K+DL+
Sbjct: 76 EEFSAMREQYIRGGRGFLLVFSVTERKSFEEAHKLYNQVLRVKDRSEYPVLLVANKVDLI 135
Query: 443 GSDNKSESRREVSCEEARLFAEENGLHHIETSAK-TGLNVEQAF 571
++R VS +E R A + L +IETSAK +NV+ AF
Sbjct: 136 -------NQRVVSEQEGRELAAQLKLMYIETSAKEPPVNVDAAF 172
>Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical
protein R07B1.12 protein.
Length = 212
Score = 85.4 bits (202), Expect = 3e-17
Identities = 52/173 (30%), Positives = 92/173 (53%), Gaps = 3/173 (1%)
Frame = +2
Query: 83 FRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAGQ 262
+++++IGD VGK+S+++ F F+ T+GVDF +I+ + + T + LQ+WD +GQ
Sbjct: 12 YKVLVIGDPGVGKTSIIRRFVHNVFSSNYKTTIGVDFALKILPVDENTVVHLQIWDISGQ 71
Query: 263 ERFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWM--MEAKRHIEPHRPVFA-LVGCKL 433
+R+ +T+ YY+++ A++V D + + E W ++ K + PV A L+ K
Sbjct: 72 DRYGVMTRVYYKDAHAAIIVLDSTRERTIEGALRWKTDLDQKVTLADGSPVPAILLANKC 131
Query: 434 DLVGSDNKSESRREVSCEEARLFAEENGLHHIETSAKTGLNVEQAFVLVAQEV 592
D+ DNK + E F + TSAK + +E+AF +A V
Sbjct: 132 DI---DNKLGDDKLYDLETNNGF-----VGSFRTSAKESVGIEEAFKFLANTV 176
>DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GLO-1
protein.
Length = 212
Score = 85.4 bits (202), Expect = 3e-17
Identities = 52/173 (30%), Positives = 92/173 (53%), Gaps = 3/173 (1%)
Frame = +2
Query: 83 FRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAGQ 262
+++++IGD VGK+S+++ F F+ T+GVDF +I+ + + T + LQ+WD +GQ
Sbjct: 12 YKVLVIGDPGVGKTSIIRRFVHNVFSSNYKTTIGVDFALKILPVDENTVVHLQIWDISGQ 71
Query: 263 ERFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWM--MEAKRHIEPHRPVFA-LVGCKL 433
+R+ +T+ YY+++ A++V D + + E W ++ K + PV A L+ K
Sbjct: 72 DRYGVMTRVYYKDAHAAIIVLDSTRERTIEGALRWKTDLDQKVTLADGSPVPAILLANKC 131
Query: 434 DLVGSDNKSESRREVSCEEARLFAEENGLHHIETSAKTGLNVEQAFVLVAQEV 592
D+ DNK + E F + TSAK + +E+AF +A V
Sbjct: 132 DI---DNKLGDDKLYDLETNNGF-----VGSFRTSAKESVGIEEAFKFLANTV 176
>U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical
protein C56E6.2 protein.
Length = 266
Score = 85.0 bits (201), Expect = 4e-17
Identities = 45/133 (33%), Positives = 75/133 (56%), Gaps = 3/133 (2%)
Frame = +2
Query: 77 YQFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTR---IKLQLW 247
++ +++++GDS VGK+S++ G + T+G F + + R ++LQ+W
Sbjct: 51 HKAKVVVLGDSGVGKTSIIYRHRYGAHYRPVNATIGASFVSFDVGADYRDREDVVRLQVW 110
Query: 248 DTAGQERFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRPVFALVGC 427
DTAGQERFR + Y RN+ AL+VYDV++R++FE + W+ + R L+G
Sbjct: 111 DTAGQERFRCMVPMYMRNADAALIVYDVTDRNTFEDVEKWLKDLDRSSGTEDANVYLIGN 170
Query: 428 KLDLVGSDNKSES 466
K DLV +E+
Sbjct: 171 KTDLVEKREVTEA 183
>Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical
protein K01G5.4 protein.
Length = 215
Score = 83.8 bits (198), Expect = 9e-17
Identities = 51/175 (29%), Positives = 95/175 (54%), Gaps = 1/175 (0%)
Frame = +2
Query: 83 FRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAGQ 262
F+L+L+GD GK++ +K G+F + T+GV+ + G +I+ +WDTAGQ
Sbjct: 10 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRG-QIRFNVWDTAGQ 68
Query: 263 ERFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRPVFALVGCKLDLV 442
E+F + YY A++++DV+ R +++++P W + R E + P+ L G K+D+
Sbjct: 69 EKFGGLRDGYYIQGQCAIIMFDVTARVTYKNVPNWHRDLARVCE-NIPI-VLCGNKVDV- 125
Query: 443 GSDNKSESRREVSCEEARLFAEENGLHHIETSAKTGLNVEQAFVLVAQEVY-QPN 604
D K +++ F + L + + SAK+ N E+ F+ +A+++ PN
Sbjct: 126 -KDRKVKAK-------TITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLLGDPN 172
>Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical
protein C25D7.7 protein.
Length = 181
Score = 83.4 bits (197), Expect = 1e-16
Identities = 55/171 (32%), Positives = 84/171 (49%)
Frame = +2
Query: 80 QFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAG 259
+F+++++G VGKS+L F F E DPT+ DF+ + IE+ DG L++ DTAG
Sbjct: 3 EFKVVVLGSGGVGKSALTVQFVSSTFIEKYDPTIE-DFYRKEIEV-DGQPSVLEILDTAG 60
Query: 260 QERFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRPVFALVGCKLDL 439
E+F S+ Y +N G ++VY ++++ +F I + R LVG K DL
Sbjct: 61 TEQFSSMRDLYIKNGQGFVVVYSITSQQTFHDIRNMKEQIVRVKGSENVPILLVGNKCDL 120
Query: 440 VGSDNKSESRREVSCEEARLFAEENGLHHIETSAKTGLNVEQAFVLVAQEV 592
+R+V EE AE E SAK NV F + +E+
Sbjct: 121 -------SHQRQVRSEEGLALAESWSCPFTECSAKNNQNVNVTFAEIVREM 164
>L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleotide
regulatory proteinprotein.
Length = 192
Score = 82.6 bits (195), Expect = 2e-16
Identities = 59/178 (33%), Positives = 95/178 (53%), Gaps = 7/178 (3%)
Frame = +2
Query: 86 RLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAGQE 265
+L+++GD GK+ LL F+ +F ++ PTV ++ A I E+ DG +++L LWDTAGQE
Sbjct: 7 KLVIVGDGACGKTCLLIVFSKDQFPDVYVPTVFENYVADI-EV-DGKQVELALWDTAGQE 64
Query: 266 RFRSITKSYYRNSVGALLVYDVSNRSSFEHIP-LWMMEAKRHIEPHRPVFALVGCKLDLV 442
+ + Y ++ L+ + + + S E+IP W E RH P+ P+ LVG K DL
Sbjct: 65 DYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEV-RHFCPNVPII-LVGNKRDLR 122
Query: 443 GSDNK----SESRRE-VSCEEARLFAEENG-LHHIETSAKTGLNVEQAFVLVAQEVYQ 598
++ ++E V E+ R AE+ G ++E SAKT + + F Q Q
Sbjct: 123 SDPQTVRELAKMKQEPVKPEQGRAIAEQIGAFAYLECSAKTKDGIREVFEKATQAALQ 180
>AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical
protein Y51H4A.3 protein.
Length = 192
Score = 82.6 bits (195), Expect = 2e-16
Identities = 59/178 (33%), Positives = 95/178 (53%), Gaps = 7/178 (3%)
Frame = +2
Query: 86 RLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAGQE 265
+L+++GD GK+ LL F+ +F ++ PTV ++ A I E+ DG +++L LWDTAGQE
Sbjct: 7 KLVIVGDGACGKTCLLIVFSKDQFPDVYVPTVFENYVADI-EV-DGKQVELALWDTAGQE 64
Query: 266 RFRSITKSYYRNSVGALLVYDVSNRSSFEHIP-LWMMEAKRHIEPHRPVFALVGCKLDLV 442
+ + Y ++ L+ + + + S E+IP W E RH P+ P+ LVG K DL
Sbjct: 65 DYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEV-RHFCPNVPII-LVGNKRDLR 122
Query: 443 GSDNK----SESRRE-VSCEEARLFAEENG-LHHIETSAKTGLNVEQAFVLVAQEVYQ 598
++ ++E V E+ R AE+ G ++E SAKT + + F Q Q
Sbjct: 123 SDPQTVRELAKMKQEPVKPEQGRAIAEQIGAFAYLECSAKTKDGIREVFEKATQAALQ 180
>Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical
protein C08F8.7 protein.
Length = 205
Score = 81.0 bits (191), Expect = 7e-16
Identities = 50/180 (27%), Positives = 99/180 (55%), Gaps = 5/180 (2%)
Frame = +2
Query: 80 QFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAG 259
+++++++G+ VGKS+L + G F D T+ D + ++ ++ D +L++ DTAG
Sbjct: 3 EYKIVVLGNGGVGKSALTLQYVQGIFVHTYDATIE-DSYRKLSKV-DAENARLEILDTAG 60
Query: 260 QERFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRPVFALVGCKLDL 439
E+F + ++YYR + G +LV+ ++ S+FE++ + + A+ G ++ +
Sbjct: 61 TEQFTGMRETYYRTAQGFVLVFSLAETSTFENLK----------QTFTDIIAIRGKEVPM 110
Query: 440 VGSDNKSE--SRREVSCEEARLFAEENGLHHIETSAKTGLNVEQAF---VLVAQEVYQPN 604
+ NKS+ R+V EA FAE+ + + ETSA+ NV + F ++ Q+ +PN
Sbjct: 111 ILVGNKSDLAETRQVDESEAHNFAEKLKIPYFETSARLNQNVSEVFEECAVLIQKSAKPN 170
>AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-related
gtpase) homologprotein 1 protein.
Length = 213
Score = 81.0 bits (191), Expect = 7e-16
Identities = 52/169 (30%), Positives = 86/169 (50%)
Frame = +2
Query: 86 RLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAGQE 265
++I++G VGKS+L F +F E +PT + +++ DG + + DTAGQE
Sbjct: 19 KVIMVGTGGVGKSALTLQFMYDEFVEEYEPTKADSYRKKVV--LDGEECSIDILDTAGQE 76
Query: 266 RFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRPVFALVGCKLDLVG 445
+ +I +YYR+ G + V+ + + SFE + + R V + LVG
Sbjct: 77 DYSAIRDNYYRSGEGFICVFSILDMESFEATNEFREQILRVKNSDSSV------PIVLVG 130
Query: 446 SDNKSESRREVSCEEARLFAEENGLHHIETSAKTGLNVEQAFVLVAQEV 592
+ +R VS E R AE+ G H++ETSAK NV++ F + +E+
Sbjct: 131 NKGDMRDQRVVSAELCRQRAEQWGCHYVETSAKRRENVDKVFYDLMREM 179
>U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding
protein protein.
Length = 212
Score = 77.8 bits (183), Expect = 6e-15
Identities = 53/162 (32%), Positives = 86/162 (53%)
Frame = +2
Query: 86 RLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAGQE 265
R++++G VGKS+L F F + DPT+ + + +D KL++ DTAGQE
Sbjct: 19 RIVVVGGGGVGKSALTIQFIQRYFVQDYDPTIEDSYTKQCFVDED--LCKLEILDTAGQE 76
Query: 266 RFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRPVFALVGCKLDLVG 445
F ++ + Y R G L+V+ V++R+SFE + + E I+ R F ++ LVG
Sbjct: 77 EFSTMREQYLRTGSGFLIVFAVTDRNSFEEVKK-LHELICRIK-DRDDFPII-----LVG 129
Query: 446 SDNKSESRREVSCEEARLFAEENGLHHIETSAKTGLNVEQAF 571
+ E+ R V+ EA A + ++E SAK NV++AF
Sbjct: 130 NKADLENERHVARHEAEELAHRLSIPYLECSAKIRKNVDEAF 171
>U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog
protein.
Length = 212
Score = 77.8 bits (183), Expect = 6e-15
Identities = 53/162 (32%), Positives = 86/162 (53%)
Frame = +2
Query: 86 RLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAGQE 265
R++++G VGKS+L F F + DPT+ + + +D KL++ DTAGQE
Sbjct: 19 RIVVVGGGGVGKSALTIQFIQRYFVQDYDPTIEDSYTKQCFVDED--LCKLEILDTAGQE 76
Query: 266 RFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRPVFALVGCKLDLVG 445
F ++ + Y R G L+V+ V++R+SFE + + E I+ R F ++ LVG
Sbjct: 77 EFSTMREQYLRTGSGFLIVFAVTDRNSFEEVKK-LHELICRIK-DRDDFPII-----LVG 129
Query: 446 SDNKSESRREVSCEEARLFAEENGLHHIETSAKTGLNVEQAF 571
+ E+ R V+ EA A + ++E SAK NV++AF
Sbjct: 130 NKADLENERHVARHEAEELAHRLSIPYLECSAKIRKNVDEAF 171
>CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical
protein C44C11.1a protein.
Length = 212
Score = 77.8 bits (183), Expect = 6e-15
Identities = 53/162 (32%), Positives = 86/162 (53%)
Frame = +2
Query: 86 RLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAGQE 265
R++++G VGKS+L F F + DPT+ + + +D KL++ DTAGQE
Sbjct: 19 RIVVVGGGGVGKSALTIQFIQRYFVQDYDPTIEDSYTKQCFVDED--LCKLEILDTAGQE 76
Query: 266 RFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRPVFALVGCKLDLVG 445
F ++ + Y R G L+V+ V++R+SFE + + E I+ R F ++ LVG
Sbjct: 77 EFSTMREQYLRTGSGFLIVFAVTDRNSFEEVKK-LHELICRIK-DRDDFPII-----LVG 129
Query: 446 SDNKSESRREVSCEEARLFAEENGLHHIETSAKTGLNVEQAF 571
+ E+ R V+ EA A + ++E SAK NV++AF
Sbjct: 130 NKADLENERHVARHEAEELAHRLSIPYLECSAKIRKNVDEAF 171
>U68252-1|AAB16967.1| 66|Caenorhabditis elegans rab2-like protein.
Length = 66
Score = 77.0 bits (181), Expect = 1e-14
Identities = 37/65 (56%), Positives = 49/65 (75%)
Frame = +2
Query: 71 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWD 250
+ Y F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR++ I DG +IKLQ+WD
Sbjct: 3 YAYLFKHIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTI-DGKQIKLQMWD 61
Query: 251 TAGQE 265
TAGQE
Sbjct: 62 TAGQE 66
>U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein.
Length = 69
Score = 76.6 bits (180), Expect = 1e-14
Identities = 38/67 (56%), Positives = 47/67 (70%)
Frame = +2
Query: 59 VDPIFDYQFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKL 238
++P +DY F+L+LIGDS VGKS LL F D + E T+GVDF R IE+ DG IKL
Sbjct: 4 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DGKTIKL 62
Query: 239 QLWDTAG 259
Q+WDTAG
Sbjct: 63 QIWDTAG 69
>Z78417-3|CAB01691.1| 195|Caenorhabditis elegans Hypothetical
protein C35C5.4 protein.
Length = 195
Score = 75.4 bits (177), Expect = 3e-14
Identities = 54/183 (29%), Positives = 91/183 (49%), Gaps = 7/183 (3%)
Frame = +2
Query: 80 QFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAG 259
Q + +++GD TVGK+ +L +T F PTV ++ A++ DG + L LWDTAG
Sbjct: 7 QIKCVVVGDGTVGKTCMLISYTTDSFPVQYVPTVFDNYSAQMS--LDGNVVNLGLWDTAG 64
Query: 260 QERFRSITKSYYRNSVGALLVYDVSNRSSFEHI-PLWMMEAKRHIEPHRPVFALVGCKLD 436
QE + + Y + +L + V + SF+++ W+ E ++H P PV LVG KLD
Sbjct: 65 QEDYDRLRPLSYPQTDVFILCFSVVSPVSFDNVASKWIPEIRQHC-PDAPVI-LVGTKLD 122
Query: 437 LVGSDN-----KSESRREVSCEEARLFAEE-NGLHHIETSAKTGLNVEQAFVLVAQEVYQ 598
L ++E + +S + A++ + ++E SA T + Q F + +
Sbjct: 123 LRDEAEPMRALQAEGKSPISKTQGMKMAQKIKAVKYLECSALTQQGLTQVFEDAVRSILH 182
Query: 599 PNP 607
P P
Sbjct: 183 PKP 185
>U82288-1|AAC47729.1| 195|Caenorhabditis elegans Rac-like GTPase
protein.
Length = 195
Score = 75.4 bits (177), Expect = 3e-14
Identities = 54/183 (29%), Positives = 91/183 (49%), Gaps = 7/183 (3%)
Frame = +2
Query: 80 QFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAG 259
Q + +++GD TVGK+ +L +T F PTV ++ A++ DG + L LWDTAG
Sbjct: 7 QIKCVVVGDGTVGKTCMLISYTTDSFPVQYVPTVFDNYSAQMS--LDGNVVNLGLWDTAG 64
Query: 260 QERFRSITKSYYRNSVGALLVYDVSNRSSFEHI-PLWMMEAKRHIEPHRPVFALVGCKLD 436
QE + + Y + +L + V + SF+++ W+ E ++H P PV LVG KLD
Sbjct: 65 QEDYDRLRPLSYPQTDVFILCFSVVSPVSFDNVASKWIPEIRQHC-PDAPVI-LVGTKLD 122
Query: 437 LVGSDN-----KSESRREVSCEEARLFAEE-NGLHHIETSAKTGLNVEQAFVLVAQEVYQ 598
L ++E + +S + A++ + ++E SA T + Q F + +
Sbjct: 123 LRDEAEPMRALQAEGKSPISKTQGMKMAQKIKAVKYLECSALTQQGLTQVFEDAVRSILH 182
Query: 599 PNP 607
P P
Sbjct: 183 PKP 185
>X68492-1|CAA48506.1| 191|Caenorhabditis elegans small ras-related
protein protein.
Length = 191
Score = 74.1 bits (174), Expect = 8e-14
Identities = 57/179 (31%), Positives = 89/179 (49%), Gaps = 7/179 (3%)
Frame = +2
Query: 86 RLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAGQE 265
+ +++GD VGK+ LL +T F PTV ++ A ++ DG I L LWDTAGQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMV--DGRPINLGLWDTAGQE 62
Query: 266 RFRSITKSYYRNSVGALLVYDVSNRSSFEHI-PLWMMEAKRHIEPHRPVFALVGCKLDLV 442
+ + Y + L+ + ++N +SFE++ W E H P+ P+ LVG K DL
Sbjct: 63 DYDRLRPLSYPQTDVFLVCFALNNPASFENVRAKWYPEVSHHC-PNTPII-LVGTKADLR 120
Query: 443 GSDNKSESRRE-----VSCEEARLFAEE-NGLHHIETSAKTGLNVEQAFVLVAQEVYQP 601
+ E RE VS + + A+E + ++E SA T ++Q F + V P
Sbjct: 121 EDRDTVERLRERRLQPVSQTQGYVMAKEIKAVKYLECSALTQRGLKQVFDEAIRAVVTP 179
>L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 74.1 bits (174), Expect = 8e-14
Identities = 57/179 (31%), Positives = 89/179 (49%), Gaps = 7/179 (3%)
Frame = +2
Query: 86 RLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAGQE 265
+ +++GD VGK+ LL +T F PTV ++ A ++ DG I L LWDTAGQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMV--DGRPINLGLWDTAGQE 62
Query: 266 RFRSITKSYYRNSVGALLVYDVSNRSSFEHI-PLWMMEAKRHIEPHRPVFALVGCKLDLV 442
+ + Y + L+ + ++N +SFE++ W E H P+ P+ LVG K DL
Sbjct: 63 DYDRLRPLSYPQTDVFLVCFALNNPASFENVRAKWYPEVSHHC-PNTPII-LVGTKADLR 120
Query: 443 GSDNKSESRRE-----VSCEEARLFAEE-NGLHHIETSAKTGLNVEQAFVLVAQEVYQP 601
+ E RE VS + + A+E + ++E SA T ++Q F + V P
Sbjct: 121 EDRDTVERLRERRLQPVSQTQGYVMAKEIKAVKYLECSALTQRGLKQVFDEAIRAVVTP 179
>L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 74.1 bits (174), Expect = 8e-14
Identities = 57/179 (31%), Positives = 89/179 (49%), Gaps = 7/179 (3%)
Frame = +2
Query: 86 RLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAGQE 265
+ +++GD VGK+ LL +T F PTV ++ A ++ DG I L LWDTAGQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMV--DGRPINLGLWDTAGQE 62
Query: 266 RFRSITKSYYRNSVGALLVYDVSNRSSFEHI-PLWMMEAKRHIEPHRPVFALVGCKLDLV 442
+ + Y + L+ + ++N +SFE++ W E H P+ P+ LVG K DL
Sbjct: 63 DYDRLRPLSYPQTDVFLVCFALNNPASFENVRAKWYPEVSHHC-PNTPII-LVGTKADLR 120
Query: 443 GSDNKSESRRE-----VSCEEARLFAEE-NGLHHIETSAKTGLNVEQAFVLVAQEVYQP 601
+ E RE VS + + A+E + ++E SA T ++Q F + V P
Sbjct: 121 EDRDTVERLRERRLQPVSQTQGYVMAKEIKAVKYLECSALTQRGLKQVFDEAIRAVVTP 179
>AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse
engulfment proteinCED-10 protein.
Length = 191
Score = 74.1 bits (174), Expect = 8e-14
Identities = 57/179 (31%), Positives = 89/179 (49%), Gaps = 7/179 (3%)
Frame = +2
Query: 86 RLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAGQE 265
+ +++GD VGK+ LL +T F PTV ++ A ++ DG I L LWDTAGQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMV--DGRPINLGLWDTAGQE 62
Query: 266 RFRSITKSYYRNSVGALLVYDVSNRSSFEHI-PLWMMEAKRHIEPHRPVFALVGCKLDLV 442
+ + Y + L+ + ++N +SFE++ W E H P+ P+ LVG K DL
Sbjct: 63 DYDRLRPLSYPQTDVFLVCFALNNPASFENVRAKWYPEVSHHC-PNTPII-LVGTKADLR 120
Query: 443 GSDNKSESRRE-----VSCEEARLFAEE-NGLHHIETSAKTGLNVEQAFVLVAQEVYQP 601
+ E RE VS + + A+E + ++E SA T ++Q F + V P
Sbjct: 121 EDRDTVERLRERRLQPVSQTQGYVMAKEIKAVKYLECSALTQRGLKQVFDEAIRAVLTP 179
>AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death
abnormality protein10, isoform b protein.
Length = 191
Score = 74.1 bits (174), Expect = 8e-14
Identities = 57/179 (31%), Positives = 89/179 (49%), Gaps = 7/179 (3%)
Frame = +2
Query: 86 RLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAGQE 265
+ +++GD VGK+ LL +T F PTV ++ A ++ DG I L LWDTAGQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMV--DGRPINLGLWDTAGQE 62
Query: 266 RFRSITKSYYRNSVGALLVYDVSNRSSFEHI-PLWMMEAKRHIEPHRPVFALVGCKLDLV 442
+ + Y + L+ + ++N +SFE++ W E H P+ P+ LVG K DL
Sbjct: 63 DYDRLRPLSYPQTDVFLVCFALNNPASFENVRAKWYPEVSHHC-PNTPII-LVGTKADLR 120
Query: 443 GSDNKSESRRE-----VSCEEARLFAEE-NGLHHIETSAKTGLNVEQAFVLVAQEVYQP 601
+ E RE VS + + A+E + ++E SA T ++Q F + V P
Sbjct: 121 EDRDTVERLRERRLQPVSQTQGYVMAKEIKAVKYLECSALTQRGLKQVFDEAIRAVLTP 179
>U68260-1|AAB16975.1| 69|Caenorhabditis elegans rab19-like
protein.
Length = 69
Score = 71.3 bits (167), Expect = 5e-13
Identities = 30/67 (44%), Positives = 47/67 (70%)
Frame = +2
Query: 62 DPIFDYQFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQ 241
D FDY F+++L+GD VGK+ +++ F +G F + T+GVDF + + + DG R+KLQ
Sbjct: 4 DDGFDYLFKIVLVGDMGVGKTCVVQRFRNGTFVDRQGTTIGVDFTMKTL-VVDGKRVKLQ 62
Query: 242 LWDTAGQ 262
+WDTAG+
Sbjct: 63 IWDTAGE 69
>U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein.
Length = 66
Score = 69.3 bits (162), Expect = 2e-12
Identities = 33/61 (54%), Positives = 45/61 (73%)
Frame = +2
Query: 71 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWD 250
+D+ F+L++IGDS VGKSSLL F D F+E T+GVDF R ++I +G R+KLQ+WD
Sbjct: 7 YDHLFKLLIIGDSGVGKSSLLLRFADNTFSENYITTIGVDFKIRTMDI-NGQRVKLQIWD 65
Query: 251 T 253
T
Sbjct: 66 T 66
>U68259-1|AAB16974.1| 69|Caenorhabditis elegans rab14-like
protein.
Length = 69
Score = 68.9 bits (161), Expect = 3e-12
Identities = 34/63 (53%), Positives = 43/63 (68%)
Frame = +2
Query: 71 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWD 250
+ Y F+ I+IGD VGKS LL FT+ KF T+GV+F RIIE+ G +IKLQ+WD
Sbjct: 8 YSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEV-SGQKIKLQIWD 66
Query: 251 TAG 259
TAG
Sbjct: 67 TAG 69
>Z82276-7|CAB05247.2| 195|Caenorhabditis elegans Hypothetical
protein K03D3.10 protein.
Length = 195
Score = 67.3 bits (157), Expect = 9e-12
Identities = 52/169 (30%), Positives = 85/169 (50%), Gaps = 7/169 (4%)
Frame = +2
Query: 86 RLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAGQE 265
+ +++GD VGK+ LL +T F TV D ++ + + DG I L LWDTAGQ+
Sbjct: 5 KCVVVGDGAVGKTCLLLSYTTNAFPGEYILTV-FDTYSTNVMV-DGRPINLSLWDTAGQD 62
Query: 266 RFRSITKSYYRNSVGALLVYDVSNRSSFEHI-PLWMMEAKRHIEPHRPVFALVGCKLDLV 442
+ + + L+ + ++N +SFE++ W E H P+ P+ LVG K DL
Sbjct: 63 DYDQFRHLSFPQTDVFLVCFALNNPASFENVRAKWYPEVSHHC-PNTPII-LVGTKADLR 120
Query: 443 GSDNKSESRRE-----VSCEEARLFAEE-NGLHHIETSAKTGLNVEQAF 571
+ E RE VS + + A+E + ++E SA T + ++Q F
Sbjct: 121 EDRDTIERLRERRLQPVSHTQGYVMAKEIKAVKYLECSALTQIGLKQVF 169
>U55018-1|AAB40386.1| 195|Caenorhabditis elegans CeRac2 protein.
Length = 195
Score = 67.3 bits (157), Expect = 9e-12
Identities = 52/169 (30%), Positives = 85/169 (50%), Gaps = 7/169 (4%)
Frame = +2
Query: 86 RLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAGQE 265
+ +++GD VGK+ LL +T F TV D ++ + + DG I L LWDTAGQ+
Sbjct: 5 KCVVVGDGAVGKTCLLLSYTTNAFPGEYILTV-FDTYSTNVMV-DGRPINLSLWDTAGQD 62
Query: 266 RFRSITKSYYRNSVGALLVYDVSNRSSFEHI-PLWMMEAKRHIEPHRPVFALVGCKLDLV 442
+ + + L+ + ++N +SFE++ W E H P+ P+ LVG K DL
Sbjct: 63 DYDQFRHLSFPQTDVFLVCFALNNPASFENVRAKWYPEVSHHC-PNTPII-LVGTKADLR 120
Query: 443 GSDNKSESRRE-----VSCEEARLFAEE-NGLHHIETSAKTGLNVEQAF 571
+ E RE VS + + A+E + ++E SA T + ++Q F
Sbjct: 121 EDRDTIERLRERRLQPVSHTQGYVMAKEIKAVKYLECSALTQIGLKQVF 169
>CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical
protein C44C11.1b protein.
Length = 168
Score = 62.9 bits (146), Expect = 2e-10
Identities = 40/119 (33%), Positives = 64/119 (53%), Gaps = 1/119 (0%)
Frame = +2
Query: 86 RLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAGQE 265
R++++G VGKS+L F F + DPT+ + + +D KL++ DTAGQE
Sbjct: 19 RIVVVGGGGVGKSALTIQFIQRYFVQDYDPTIEDSYTKQCFVDED--LCKLEILDTAGQE 76
Query: 266 RFRSITKSYYRNSVGALLVYDVSNRSSFEHI-PLWMMEAKRHIEPHRPVFALVGCKLDL 439
F ++ + Y R G L+V+ V++R+SFE + L + + P+ LVG K DL
Sbjct: 77 EFSTMREQYLRTGSGFLIVFAVTDRNSFEEVKKLHELICRIKDRDDFPII-LVGNKADL 134
>AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical
protein Y32F6B.3 protein.
Length = 187
Score = 62.5 bits (145), Expect = 2e-10
Identities = 49/166 (29%), Positives = 86/166 (51%), Gaps = 2/166 (1%)
Frame = +2
Query: 80 QFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAG 259
+ +L+++GD+ GK+SLL +T +F + TV D +A + I D + L+DTAG
Sbjct: 4 KLKLVVVGDTYTGKTSLLVAYTKKQFLDNYTTTV-FDNWAVSVHI-DNKNYAVNLFDTAG 61
Query: 260 QERFRSITKSYYRNSVGALLVYDVSNRSSFEHI-PLWMMEAKRHIEPHRPVFALVGCKLD 436
Q + I Y ++ L+ + + +R + E W+ E +++ + P+ LVG K D
Sbjct: 62 QGNYEQIRCLSYPHANVFLVCFSMIDRKTLESCRSTWIPEIRKYAGDNVPIM-LVGTKND 120
Query: 437 LVGSDNKSESRREVSCEEARLFAEENGLHHI-ETSAKTGLNVEQAF 571
LV + ++SR V+ + A+ A E G H SA T +++ F
Sbjct: 121 LV---DDADSRNTVTEDYAKRVAHEIGCHKFYSCSALTHKGLKRVF 163
>U23452-10|AAK31543.1| 191|Caenorhabditis elegans Hypothetical
protein R07G3.1 protein.
Length = 191
Score = 59.3 bits (137), Expect = 2e-09
Identities = 50/169 (29%), Positives = 80/169 (47%), Gaps = 7/169 (4%)
Frame = +2
Query: 86 RLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAGQE 265
+ +++GD VGK+ LL +T KF PTV D +A + I G L L+DTAGQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV-FDNYAVTVMI-GGEPYTLGLFDTAGQE 62
Query: 266 RFRSITKSYYRNSVGALLVYDVSNRSSFEHI-PLWMMEAKRHIEPHRPVFALVGCKLDLV 442
+ + Y + L+ + V +SFE++ W+ E H + F LVG ++DL
Sbjct: 63 DYDRLRPLSYPQTDVFLVCFSVVAPASFENVREKWVPEISHHCS--KTPFLLVGTQVDLR 120
Query: 443 GSDNKSE-----SRREVSCEEARLFAEE-NGLHHIETSAKTGLNVEQAF 571
E ++ VS + A+E + ++E SA T ++ F
Sbjct: 121 DDPGMLEKLAKNKQKPVSTDVGEKLAKELKAVKYVECSALTQKGLKNVF 169
>L10078-1|AAA51433.1| 188|Caenorhabditis elegans guanine nucleotide
regulatory proteinprotein.
Length = 188
Score = 59.3 bits (137), Expect = 2e-09
Identities = 50/169 (29%), Positives = 80/169 (47%), Gaps = 7/169 (4%)
Frame = +2
Query: 86 RLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAGQE 265
+ +++GD VGK+ LL +T KF PTV D +A + I G L L+DTAGQE
Sbjct: 2 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV-FDNYAVTVMI-GGEPYTLGLFDTAGQE 59
Query: 266 RFRSITKSYYRNSVGALLVYDVSNRSSFEHI-PLWMMEAKRHIEPHRPVFALVGCKLDLV 442
+ + Y + L+ + V +SFE++ W+ E H + F LVG ++DL
Sbjct: 60 DYDRLRPLSYPQTDVFLVCFSVVAPASFENVREKWVPEISHHCS--KTPFLLVGTQVDLR 117
Query: 443 GSDNKSE-----SRREVSCEEARLFAEE-NGLHHIETSAKTGLNVEQAF 571
E ++ VS + A+E + ++E SA T ++ F
Sbjct: 118 DDPGMLEKLAKNKQKPVSTDVGEKLAKELKAVKYVECSALTQKGLKNVF 166
>U68264-1|AAB16979.1| 66|Caenorhabditis elegans S10-like protein.
Length = 66
Score = 58.8 bits (136), Expect = 3e-09
Identities = 26/49 (53%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Frame = +2
Query: 245 WDTAGQERFR-SITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRH 388
WDTAGQER+R SI YYRN + VYDV+ R SF + LW+ E ++H
Sbjct: 1 WDTAGQERYRQSIVAHYYRNVNAVVFVYDVTCRESFNDLALWIKECEKH 49
>S82771-1|AAC05600.1| 191|Caenorhabditis elegans cdc42 homolog
protein.
Length = 191
Score = 56.8 bits (131), Expect = 1e-08
Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 7/169 (4%)
Frame = +2
Query: 86 RLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAGQE 265
+ +++GD VGK+ LL +T KF PTV D +A + + G L L+DTAGQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV-FDNYA-VTAMIGGEPYTLGLFDTAGQE 62
Query: 266 RFRSITKSYYRNSVGALLVYDVSNRSSFEHI-PLWMMEAKRHIEPHRPVFALVGCKLDLV 442
+ + Y + L+ + V +SFE++ W+ E H + F LVG ++DL
Sbjct: 63 DYDRLRPLSYPQTDVFLVCFSVVAPASFENVREKWVPEISHHCS--KTPFLLVGTQVDLR 120
Query: 443 GSDNKSE-----SRREVSCEEARLFAEE-NGLHHIETSAKTGLNVEQAF 571
E ++ VS A+E + ++E SA T ++ F
Sbjct: 121 DDPGMLEKLAKNKQKPVSTYVGEKLAKELKAVKYVECSALTEKELKNVF 169
>Z71180-2|CAA94890.1| 207|Caenorhabditis elegans Hypothetical
protein F22E12.2 protein.
Length = 207
Score = 56.4 bits (130), Expect = 2e-08
Identities = 49/166 (29%), Positives = 80/166 (48%), Gaps = 4/166 (2%)
Frame = +2
Query: 86 RLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAGQE 265
+ I +G++ VGK+S++ +T + PT +F ++ + D I+LQL DTAGQ
Sbjct: 11 KCIFVGNAAVGKTSMIVSYTTNVYPHNYVPTAFDNF--SVVVLVDKKPIRLQLHDTAGQS 68
Query: 266 RFRSITKSYYRNSVGALLVYDVSNRSSFEHIP-LWMMEAKRHIEPHRPVFALVGCKLDLV 442
F ++ Y ++ ++VY V + SFE + W E + P G KL LV
Sbjct: 69 SFDTLRPLCYTDADVFVIVYSVVDLQSFEDVSHHWYPEVTKR-NP--------GTKLILV 119
Query: 443 G--SDNKSESR-REVSCEEARLFAEENGLHHIETSAKTGLNVEQAF 571
G +D + + R V+ + A+ G E SA T N++Q F
Sbjct: 120 GTQADQRWQVRGNTVTQLRGKALADRLGAEFFECSALTQHNLKQMF 165
>U68254-1|AAB16969.1| 67|Caenorhabditis elegans rab6-like protein.
Length = 67
Score = 53.6 bits (123), Expect = 1e-07
Identities = 22/59 (37%), Positives = 39/59 (66%)
Frame = +2
Query: 80 QFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTA 256
+F L+ +G+ +VGK+SL+ F F T+G+DF ++ + ++D T ++LQ+WDTA
Sbjct: 10 KFELVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRT-VRLQMWDTA 67
>AL117204-37|CAB55148.2| 248|Caenorhabditis elegans Hypothetical
protein Y116A8C.10b protein.
Length = 248
Score = 53.6 bits (123), Expect = 1e-07
Identities = 31/103 (30%), Positives = 53/103 (51%), Gaps = 8/103 (7%)
Frame = +2
Query: 86 RLILIGDSTVGKSSLLKYFTDGKF----AELSDPTVGVDFFARIIEIQDGTRIK----LQ 241
+++++GDS VGK+SL G D T+G E + GT + L+
Sbjct: 10 KILVLGDSCVGKTSLCHCIAGGGEPPGGGRSFDSTIGATVVMAWHEYRAGTPEQRTELLE 69
Query: 242 LWDTAGQERFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWM 370
LWD G R + ++ +VGA+LV+D++N+ S E++ W+
Sbjct: 70 LWDIGGMVAHRQAAQVFFEGAVGAILVHDLTNKRSEENLATWL 112
>U97592-7|AAB52874.2| 332|Caenorhabditis elegans Sperm-specific
family, class rprotein 2 protein.
Length = 332
Score = 52.0 bits (119), Expect = 4e-07
Identities = 42/179 (23%), Positives = 84/179 (46%), Gaps = 1/179 (0%)
Frame = +2
Query: 38 ECTIKKMVDPIFDYQFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQ 217
+C K D + + ++RL+++G + VGK+++++ + +F+ T+ D +R IQ
Sbjct: 3 KCLQPKTEDEMCEERYRLVVLGSAKVGKTNIIRRYLYNEFSSKYKETI-EDLHSREFRIQ 61
Query: 218 DGTRIKLQLWDTAGQERFRSITKSYYRNSVGALLVYDVSNRSSFEHI-PLWMMEAKRHIE 394
G + L + DT F + + ++ LLV+ V + +SF+ + +W R +
Sbjct: 62 -GVPLPLDILDT--NFNFPDMRRLSIASASAFLLVFSVDDVTSFKEMSDIWQEICSRRSD 118
Query: 395 PHRPVFALVGCKLDLVGSDNKSESRREVSCEEARLFAEENGLHHIETSAKTGLNVEQAF 571
+ +VG K D+ +NK RL ++ + +IE SAK + + F
Sbjct: 119 LNELPIVVVGNKCDV---ENKKIYEETAKAFTNRLSSD---VRYIEVSAKDNIRITDVF 171
>Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical
protein F22B5.1 protein.
Length = 184
Score = 51.6 bits (118), Expect = 5e-07
Identities = 27/87 (31%), Positives = 49/87 (56%)
Frame = +2
Query: 80 QFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAG 259
+ R++++G GK++L+K F D + +PT+G D + + +D +L LWD G
Sbjct: 16 EMRILILGLDNAGKTTLMKKFLDEP-TDTIEPTLGFDI--KTVHFKD---FQLNLWDVGG 69
Query: 260 QERFRSITKSYYRNSVGALLVYDVSNR 340
Q+ RS K+Y+ ++ + V D S+R
Sbjct: 70 QKSLRSYWKNYFESTDALIWVVDSSDR 96
>Z22178-5|CAA80155.1| 207|Caenorhabditis elegans Hypothetical
protein F54C8.5 protein.
Length = 207
Score = 51.2 bits (117), Expect = 6e-07
Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 1/170 (0%)
Frame = +2
Query: 86 RLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAGQE 265
++ ++G VGKS+L+ FT F E + T+ I +++ DTAGQ+
Sbjct: 15 KVAVMGYPHVGKSALVLRFTQNIFPERYESTIEDQHSKHIAAFHRDYHLRVT--DTAGQQ 72
Query: 266 RFRSITKSYYRNSVGALLVYDVSNRSSFEHIP-LWMMEAKRHIEPHRPVFALVGCKLDLV 442
+ +S + G +LVY + +R SFE ++ + + + P+ +VG K DL
Sbjct: 73 EYTVFPRSCSLDINGFILVYAIDDRKSFEMCSNIYEKIVRTYGDTSIPI-VIVGNKTDL- 130
Query: 443 GSDNKSESRREVSCEEARLFAEENGLHHIETSAKTGLNVEQAFVLVAQEV 592
++R V EE A + +E +A+ V + F L+ +E+
Sbjct: 131 ------STQRVVRAEEGEELARQWDAKFVEITARESNRVHEVFELLLREI 174
>U41276-1|AAA82469.1| 238|Caenorhabditis elegans Hypothetical
protein C52B11.5 protein.
Length = 238
Score = 50.4 bits (115), Expect = 1e-06
Identities = 44/160 (27%), Positives = 71/160 (44%), Gaps = 1/160 (0%)
Frame = +2
Query: 86 RLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAG-Q 262
++I++G GKS+ ++ GKF E A+ + Q T ++L D G
Sbjct: 26 KIIVVGAKNAGKSTFIERVEFGKFHEEKQTEKLYRVIAKKVFEQTLT-VELIEKDLGGLT 84
Query: 263 ERFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRPVFALVGCKLDLV 442
K+ R+ LL Y + SF+ + ++ +R I P+ + +VG K D+
Sbjct: 85 NEDNGFKKTEMRDVDAVLLFYAADDLESFKQLKENLVHVQRKIPPNANI-TVVGTKADV- 142
Query: 443 GSDNKSESRREVSCEEARLFAEENGLHHIETSAKTGLNVE 562
+V +E FAE G ETS+KTG+NVE
Sbjct: 143 -------KEMQVQWQEVDSFAENQGFSCFETSSKTGVNVE 175
>AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylation
factor related(20.5 kD) (arf-3) protein.
Length = 180
Score = 48.4 bits (110), Expect = 4e-06
Identities = 26/104 (25%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Frame = +2
Query: 44 TIKKMVDPIFDY-QFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQD 220
TI + + +F Q R++++G GK+++L G+ + PT+G + +E +
Sbjct: 4 TISSLFNRLFGKRQVRILMVGLDAAGKTTILYKLKLGEIVT-TIPTIGFN-----VETVE 57
Query: 221 GTRIKLQLWDTAGQERFRSITKSYYRNSVGALLVYDVSNRSSFE 352
I +WD GQ++ R + + Y++N+ G + V D +++ E
Sbjct: 58 YKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDKERIE 101
>AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 3 protein.
Length = 180
Score = 48.4 bits (110), Expect = 4e-06
Identities = 26/104 (25%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Frame = +2
Query: 44 TIKKMVDPIFDY-QFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQD 220
TI + + +F Q R++++G GK+++L G+ + PT+G + +E +
Sbjct: 4 TISSLFNRLFGKRQVRILMVGLDAAGKTTILYKLKLGEIVT-TIPTIGFN-----VETVE 57
Query: 221 GTRIKLQLWDTAGQERFRSITKSYYRNSVGALLVYDVSNRSSFE 352
I +WD GQ++ R + + Y++N+ G + V D +++ E
Sbjct: 58 YKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDKERIE 101
>Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical
protein Y57G11C.13 protein.
Length = 185
Score = 48.0 bits (109), Expect = 6e-06
Identities = 33/123 (26%), Positives = 57/123 (46%)
Frame = +2
Query: 80 QFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAG 259
+ L L+G GK++ + G+F E PTVG + + +I G + ++LWD G
Sbjct: 20 EMELTLVGLQNSGKTTFVNVIASGQFTEDMIPTVGFN----MRKITKGN-VTIKLWDIGG 74
Query: 260 QERFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRPVFALVGCKLDL 439
Q RFRS+ + Y R + + D ++ E +M+ + ++G K DL
Sbjct: 75 QPRFRSMWERYCRGVNAIVFMVDAADEEKLEASRNELMQLLDKPQLDAIPVLVLGNKKDL 134
Query: 440 VGS 448
G+
Sbjct: 135 PGA 137
>U68262-1|AAB16977.1| 74|Caenorhabditis elegans RAM1-like protein.
Length = 74
Score = 48.0 bits (109), Expect = 6e-06
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Frame = +2
Query: 71 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQD--------GT 226
+DY + + GD VGK+S L +TD F TVG+DF + + + G
Sbjct: 4 YDYLIKFLAPGDPGVGKTSFLHRYTDNTFTGQFISTVGIDFKEKKVVYESSRGGFGGRGQ 63
Query: 227 RIKLQLWDTAG 259
R+ LQ+WDTAG
Sbjct: 64 RVLLQIWDTAG 74
>U68253-1|AAB16968.1| 65|Caenorhabditis elegans rab6-like protein.
Length = 65
Score = 48.0 bits (109), Expect = 6e-06
Identities = 19/56 (33%), Positives = 37/56 (66%)
Frame = +2
Query: 80 QFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLW 247
+F+L+ +G+ +VGK+S++ F F T+G+DF ++ + ++D T I+LQ+W
Sbjct: 11 KFKLVFLGEQSVGKTSIITRFMYDSFDNTYQATIGIDFLSKTMYLEDRT-IRLQIW 65
>AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G
protein indispensablefor equal chromosome segregation
protein.
Length = 185
Score = 48.0 bits (109), Expect = 6e-06
Identities = 33/123 (26%), Positives = 57/123 (46%)
Frame = +2
Query: 80 QFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAG 259
+ L L+G GK++ + G+F E PTVG + + +I G + ++LWD G
Sbjct: 20 EMELTLVGLQNSGKTTFVNVIASGQFTEDMIPTVGFN----MRKITKGN-VTIKLWDIGG 74
Query: 260 QERFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRPVFALVGCKLDL 439
Q RFRS+ + Y R + + D ++ E +M+ + ++G K DL
Sbjct: 75 QPRFRSMWERYCRGVNAIVFMVDAADEEKLEASRNELMQLLDKPQLDAIPVLVLGNKKDL 134
Query: 440 VGS 448
G+
Sbjct: 135 PGA 137
>U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.2 protein.
Length = 181
Score = 47.6 bits (108), Expect = 8e-06
Identities = 30/128 (23%), Positives = 59/128 (46%)
Frame = +2
Query: 80 QFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAG 259
+ R++++G GK+++L G+ + PT+G + +E + I +WD G
Sbjct: 17 EMRILMVGLDAAGKTTILYKLKLGEIVT-TIPTIGFN-----VETVEYKNISFTVWDVGG 70
Query: 260 QERFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRPVFALVGCKLDL 439
Q++ R + + Y++N+ G + V D ++R +M E V + K DL
Sbjct: 71 QDKIRPLWRHYFQNTQGLIFVVDSNDRERVGEAREELMRMLAEDELRDAVLLVFANKQDL 130
Query: 440 VGSDNKSE 463
+ N +E
Sbjct: 131 PQAMNAAE 138
>Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical
protein F54C9.10 protein.
Length = 180
Score = 47.2 bits (107), Expect = 1e-05
Identities = 38/173 (21%), Positives = 76/173 (43%)
Frame = +2
Query: 80 QFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAG 259
+ R++++G GK+++L G+ + PT+G + +E + +K Q+WD G
Sbjct: 16 EMRILILGLDGAGKTTILYRLQVGEVVT-TIPTIGFN-----VEQVEYKNLKFQVWDLGG 69
Query: 260 QERFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRPVFALVGCKLDL 439
Q R + YY N+ + V D ++R + + E V A++ K D+
Sbjct: 70 QTSIRPYWRCYYANTDAIIYVVDSADRDRVGISRQELATMLQEDELQGAVLAVLANKQDI 129
Query: 440 VGSDNKSESRREVSCEEARLFAEENGLHHIETSAKTGLNVEQAFVLVAQEVYQ 598
G ++E + + + R + +TSA G ++ A +A ++ Q
Sbjct: 130 AGCLTETEVYKALGLDALR----NRTIQIFKTSASKGEGLDPAMDWLANQLQQ 178
>Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical
protein F19H8.3 protein.
Length = 184
Score = 46.8 bits (106), Expect = 1e-05
Identities = 32/139 (23%), Positives = 65/139 (46%)
Frame = +2
Query: 80 QFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAG 259
+ R++L+G GK+++LK + ++ PT G + + + D I+L +WD G
Sbjct: 17 EIRILLLGLDNAGKTTILKQLSSEDVQHVT-PTKGFNV-KTVAAMGD---IRLNVWDIGG 71
Query: 260 QERFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRPVFALVGCKLDL 439
Q R +YY N + V D +++ F+ + + + E + + + K DL
Sbjct: 72 QRSIRPYWSNYYENIDTLIFVIDSNDKKRFDEMNIELGELLDEEKLRKVPVLIFANKQDL 131
Query: 440 VGSDNKSESRREVSCEEAR 496
V + + E R+++ + R
Sbjct: 132 VTAASSEEITRKLNLDLLR 150
>AF038608-15|AAC25820.1| 129|Caenorhabditis elegans Cell death
abnormality protein10, isoform a protein.
Length = 129
Score = 46.8 bits (106), Expect = 1e-05
Identities = 25/62 (40%), Positives = 36/62 (58%)
Frame = +2
Query: 86 RLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAGQE 265
+ +++GD VGK+ LL +T F PTV ++ A ++ DG I L LWDTAGQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMV--DGRPINLGLWDTAGQE 62
Query: 266 RF 271
+
Sbjct: 63 DY 64
>AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical
protein Y116A8C.12 protein.
Length = 175
Score = 44.8 bits (101), Expect = 5e-05
Identities = 32/149 (21%), Positives = 64/149 (42%), Gaps = 1/149 (0%)
Frame = +2
Query: 53 KMVDPIFDY-QFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTR 229
K + IF + R++++G GK+++L G+ + + PTVG + +E
Sbjct: 3 KFLSKIFGKKELRILMLGLDAAGKTTILYKLKLGQ-SVTTIPTVGFN-----VETVTYKN 56
Query: 230 IKLQLWDTAGQERFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRPV 409
IK +WD GQ++ R + + YY + + V D ++R + + + E +
Sbjct: 57 IKFNVWDVGGQDKIRPLWRHYYTGTQALIFVMDAADRDRVDEARMELHRIINDREMKEAI 116
Query: 410 FALVGCKLDLVGSDNKSESRREVSCEEAR 496
+ K DL + E + ++ R
Sbjct: 117 ILVFANKQDLADAMKPHEIQDKLGLTRIR 145
>U66216-1|AAB07465.1| 128|Caenorhabditis elegans RAN/Tc4 protein.
Length = 128
Score = 43.6 bits (98), Expect = 1e-04
Identities = 31/116 (26%), Positives = 61/116 (52%), Gaps = 1/116 (0%)
Frame = +2
Query: 260 QERFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRPVFALVGCKLDL 439
QE+F + YY A++++DV+ R +++++P W + R E + P+ L G K+D+
Sbjct: 2 QEKFGGLRDGYYIQGQCAIIMFDVTARVTYKNVPNWHHDLARVCE-NIPI-VLCGNKVDV 59
Query: 440 VGSDNKSESRREVSCEEARLFAEENGLHHIETSAKTGLNVEQAFVLVAQEVY-QPN 604
D K +++ F + L + + SAK+ N E+ F+ +A+++ PN
Sbjct: 60 --KDRKVKAK-------TITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLLGDPN 106
>Z46241-6|CAA86319.1| 190|Caenorhabditis elegans Hypothetical
protein C38D4.8 protein.
Length = 190
Score = 43.2 bits (97), Expect = 2e-04
Identities = 33/129 (25%), Positives = 62/129 (48%), Gaps = 4/129 (3%)
Frame = +2
Query: 89 LILIGDSTVGKSSLLKYF-TDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAGQE 265
++++G GK+++L T ++ PTVG ++ + +D AGQ
Sbjct: 20 IVVVGLDNSGKTTILNQLKTPETRSQQIVPTVG-----HVVTNFSTQNLSFHAFDMAGQM 74
Query: 266 RFRSITKSYYRNSVGALLVYDVSNRSSFEHIP---LWMMEAKRHIEPHRPVFALVGCKLD 436
++RS +SY+ +S G + V D S+R E + + +ME K + P+ L K+D
Sbjct: 75 KYRSTWESYFHSSQGVIFVLDSSDRLRMELLKDELMMVMEHKDVVSRGIPIVILAN-KMD 133
Query: 437 LVGSDNKSE 463
+ G+ S+
Sbjct: 134 IPGAMTASD 142
>Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical
protein ZK632.8 protein.
Length = 178
Score = 42.7 bits (96), Expect = 2e-04
Identities = 30/139 (21%), Positives = 63/139 (45%)
Frame = +2
Query: 80 QFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAG 259
++++I++G GK+++L + E + PT+G + +E + +WD G
Sbjct: 17 KYKIIVVGLDNAGKTTILYNYVTKDQVE-TKPTIGSN-----VEEVSYRNLDFVIWDIGG 70
Query: 260 QERFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRPVFALVGCKLDL 439
QE R +YY + ++V D S+ + + + +H + R ++ K DL
Sbjct: 71 QESLRKSWSTYYVQTDVVIVVIDSSDTTRIPIMKEQLHNMLQHEDLARAHILVLANKQDL 130
Query: 440 VGSDNKSESRREVSCEEAR 496
G+ N +E ++ + R
Sbjct: 131 PGAMNPAEVSTQLGLQTLR 149
>U28733-4|AAA68305.2| 125|Caenorhabditis elegans Di-ras/rig/noey2
ras-like proteinhomolog protein 1 protein.
Length = 125
Score = 42.3 bits (95), Expect = 3e-04
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Frame = +2
Query: 314 LLVYDVSNRSSF-EHIPLWMMEAKRHIEPHRPVFALVGCKLDLVGSDNKSESRREVSCEE 490
+L+Y V+N+ SF E +P+ +E + ++ + A+ + LVG+ ES+REVS
Sbjct: 13 ILIYSVTNKQSFAELVPI--IEMMKEVKGN----AIAETPIMLVGNKKDEESKREVSSNS 66
Query: 491 ARLFAEENGLHHIETSAKTGLNVEQAF 571
+ A IETSAK N+ + F
Sbjct: 67 GQKVATNMECGFIETSAKNNENITELF 93
>U68261-1|AAB16976.1| 53|Caenorhabditis elegans rab19-like
protein.
Length = 53
Score = 41.9 bits (94), Expect = 4e-04
Identities = 16/48 (33%), Positives = 31/48 (64%)
Frame = +2
Query: 71 FDYQFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEI 214
+ Y F+++L+ ++ VGK+ L++ FT G F T+GVDF + +++
Sbjct: 4 YKYLFKVVLVPNAGVGKTCLVRKFTQGIFPPGQSATIGVDFMIKTVKV 51
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 40.3 bits (90), Expect = 0.001
Identities = 26/86 (30%), Positives = 44/86 (51%)
Frame = +2
Query: 95 LIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAGQERFR 274
++G VGKS+++ F KF E PTV +F EI++G + +Q+ D++G F
Sbjct: 27 VLGAERVGKSAMVSQFLWHKFVEDYRPTV-EEFNWIEYEIEEGRVLMVQIIDSSGSRDFI 85
Query: 275 SITKSYYRNSVGALLVYDVSNRSSFE 352
+ Y + L+V+ + SS E
Sbjct: 86 GMKNLYIGTADAFLVVFAADDASSLE 111
>U68263-1|AAB16978.1| 115|Caenorhabditis elegans rab-like protein.
Length = 115
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Frame = +2
Query: 77 YQFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTR---IKLQLW 247
++ +++++GDS VGK+S++ G + T+G F + + R ++LQ+W
Sbjct: 51 HKAKVVVLGDSGVGKTSIIYRHRYGAHYRPVNATIGASFVSFDVGADYRDREDVVRLQMW 110
Query: 248 DTAGQ 262
DTAGQ
Sbjct: 111 DTAGQ 115
>Z49912-5|CAA90136.1| 312|Caenorhabditis elegans Hypothetical
protein T24F1.1 protein.
Length = 312
Score = 37.9 bits (84), Expect = 0.006
Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 9/139 (6%)
Frame = +2
Query: 86 RLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAGQE 265
+++L+G S GK+S+ A +G ++ + L LWD GQE
Sbjct: 6 KVLLMGKSGSGKTSMRSIIFANYIAR-DCSRLGPTIEVEHAHVKFLGNMVLHLWDCGGQE 64
Query: 266 RFR-----SITKSYYRNSVGALLVYDVSNRSSFEHIPLWM--MEAKRHIEPHRPVFALVG 424
F S ++N + V+DV +R + + + +EA P+ VF L+
Sbjct: 65 SFMENFLVSQKDQIFKNVQVLIYVFDVESREFEKDLRYYQSCLEALLQNSPNAQVFCLIH 124
Query: 425 CKLDLVGSDNKSES--RRE 475
K+DL+ D + E+ RRE
Sbjct: 125 -KMDLIEEDKREETFKRRE 142
>U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.1 protein.
Length = 179
Score = 37.5 bits (83), Expect = 0.008
Identities = 25/92 (27%), Positives = 45/92 (48%)
Frame = +2
Query: 86 RLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAGQE 265
R +++G GK+++L + + PT+G + +E +I L +WD GQ+
Sbjct: 19 RTLMLGLDGAGKTTILYKLKLNETVN-TIPTIGFN-----VETVTFQKITLTVWDVGGQK 72
Query: 266 RFRSITKSYYRNSVGALLVYDVSNRSSFEHIP 361
+ R++ K Y+ N+ + V D S E IP
Sbjct: 73 KIRALWKYYFPNTTTLVFVVD---SSDIERIP 101
>AL031633-14|CAA21032.1| 903|Caenorhabditis elegans Hypothetical
protein Y39A1A.15c protein.
Length = 903
Score = 36.7 bits (81), Expect = 0.014
Identities = 42/167 (25%), Positives = 76/167 (45%), Gaps = 2/167 (1%)
Frame = +2
Query: 77 YQFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTA 256
++FR+ ++G S GK++L+ + G + P G F + + I+ + L L
Sbjct: 29 HKFRIGIVGTSQSGKTALVHRYLTGTYTPDESPEGG--RFKKEVVIEGQSH--LLLIRDE 84
Query: 257 GQERFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRPVFALVGCKLD 436
GQ+ + + ++V + V++V + S++ I E ++ LVG K
Sbjct: 85 GQQHL-DVQFCQWVDAV--VFVFNVCSIQSYDSIQALAHEMSKYRNISDLPLILVGTK-- 139
Query: 437 LVGSDNKSESRREVSCEE--ARLFAEENGLHHIETSAKTGLNVEQAF 571
D+ SE R V E+ +L A+ + ETS+ G NVE+ F
Sbjct: 140 ----DHISEKRARVITEDEGRQLAAQMKRCSYFETSSTYGTNVERVF 182
>U50301-3|AAM29676.1| 370|Caenorhabditis elegans Hypothetical
protein F20D6.8 protein.
Length = 370
Score = 36.3 bits (80), Expect = 0.019
Identities = 44/185 (23%), Positives = 79/185 (42%), Gaps = 10/185 (5%)
Frame = +2
Query: 89 LILIGDSTVGKSSL---LKYFTDGKFAELSDPTV-GVDFFARIIEIQDGTRIKLQ--LWD 250
L + G GK SL + +F E DP G D+ + +G + L+ L
Sbjct: 174 LRIYGARNCGKKSLANRIHHFATSMAPERVDPDENGNDYTKMTTFLLNGREVTLEILLES 233
Query: 251 TAGQERFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRPVFALVGCK 430
T FR +K+ Y +++Y++ NR SF + ++E + PV +
Sbjct: 234 TLENSPFRQ-SKTLY------IVMYNMDNRQSFIYATQ-ILERITLANLNNPV----PLQ 281
Query: 431 LDLVGSDNKSESRREVSCEEARLFAEENGLHHIETSAKTGLNVEQAFVLVAQEVYQPN-- 604
L L+G+ + + +S E + A +E SA G+N E+ + + +E+ +P+
Sbjct: 282 LFLIGNKCDLKRNQVISTNEGKSVARTFKCDFLEVSALLGMNTEETWTTILKELQEPSER 341
Query: 605 --PDW 613
P W
Sbjct: 342 RRPSW 346
>Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical
protein ZK1320.6 protein.
Length = 539
Score = 35.9 bits (79), Expect = 0.025
Identities = 20/81 (24%), Positives = 36/81 (44%)
Frame = +2
Query: 86 RLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAGQE 265
R++L+G GK+S+++ + + P + F I ++ +L WD G
Sbjct: 371 RVVLLGLDGAGKTSIVRRLKKVQMDTVMAPHPTIGFNIETIHYKN---YRLNFWDVGGLP 427
Query: 266 RFRSITKSYYRNSVGALLVYD 328
+ R + K YY N+ V D
Sbjct: 428 KLRHLWKHYYSNAQAIFYVID 448
>AC024812-5|AAF59556.1| 191|Caenorhabditis elegans Hypothetical
protein Y54E10BR.2 protein.
Length = 191
Score = 35.5 bits (78), Expect = 0.033
Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 5/115 (4%)
Frame = +2
Query: 236 LQLWDTAGQERFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEA-KRHIEPHRPVF 412
L WD GQE R + +YY ++ + V D + F + E I + PV
Sbjct: 71 LHFWDLGGQESLRELWATYYDDANAMIFVVDATRSDLFPIVASQFKEVMANEIVQNIPVL 130
Query: 413 ALVGCKLDLVGSDNKSESRREVSCEEARLFAEENG----LHHIETSAKTGLNVEQ 565
V NKSE + E R+ E++ L + SA G N+E+
Sbjct: 131 VAV----------NKSEMEGAAAAAEVRMLLEDDNHRSDLAVLPVSALEGTNIER 175
>U68255-1|AAB16970.1| 70|Caenorhabditis elegans rab7-like protein.
Length = 70
Score = 33.5 bits (73), Expect = 0.13
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 9/56 (16%)
Frame = +2
Query: 86 RLILIGDSTVGKSSLLKYFTDG---------KFAELSDPTVGVDFFARIIEIQDGT 226
++I++GDS VGK+SL+ + G +F T+G DF R + I D T
Sbjct: 11 KVIILGDSGVGKTSLMNQYEIGDLMNQYVNRRFMNQYKATIGADFLTRDVNIDDRT 66
>AL031633-13|CAA21027.1| 951|Caenorhabditis elegans Hypothetical
protein Y39A1A.15b protein.
Length = 951
Score = 33.5 bits (73), Expect = 0.13
Identities = 41/166 (24%), Positives = 76/166 (45%), Gaps = 2/166 (1%)
Frame = +2
Query: 80 QFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAG 259
+ +L ++G S GK++L+ + G + P G F + + I+ + + L + D G
Sbjct: 78 EMKLGIVGTSQSGKTALVHRYLTGTYTPDESPEGGR--FKKEVVIEGQSHLLL-IRDE-G 133
Query: 260 QERFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRPVFALVGCKLDL 439
Q+ + + ++V + V++V + S++ I E ++ LVG K
Sbjct: 134 QQHL-DVQFCQWVDAV--VFVFNVCSIQSYDSIQALAHEMSKYRNISDLPLILVGTK--- 187
Query: 440 VGSDNKSESRREVSCEEA--RLFAEENGLHHIETSAKTGLNVEQAF 571
D+ SE R V E+ +L A+ + ETS+ G NVE+ F
Sbjct: 188 ---DHISEKRARVITEDEGRQLAAQMKRCSYFETSSTYGTNVERVF 230
>AL031633-12|CAA21026.2| 1107|Caenorhabditis elegans Hypothetical
protein Y39A1A.15a protein.
Length = 1107
Score = 33.5 bits (73), Expect = 0.13
Identities = 41/166 (24%), Positives = 76/166 (45%), Gaps = 2/166 (1%)
Frame = +2
Query: 80 QFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAG 259
+ +L ++G S GK++L+ + G + P G F + + I+ + + L + D G
Sbjct: 234 EMKLGIVGTSQSGKTALVHRYLTGTYTPDESPEGGR--FKKEVVIEGQSHLLL-IRDE-G 289
Query: 260 QERFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRPVFALVGCKLDL 439
Q+ + + ++V + V++V + S++ I E ++ LVG K
Sbjct: 290 QQHL-DVQFCQWVDAV--VFVFNVCSIQSYDSIQALAHEMSKYRNISDLPLILVGTK--- 343
Query: 440 VGSDNKSESRREVSCEEA--RLFAEENGLHHIETSAKTGLNVEQAF 571
D+ SE R V E+ +L A+ + ETS+ G NVE+ F
Sbjct: 344 ---DHISEKRARVITEDEGRQLAAQMKRCSYFETSSTYGTNVERVF 386
>AJ132700-1|CAA10736.1| 952|Caenorhabditis elegans centaurin gamma
1A protein.
Length = 952
Score = 33.5 bits (73), Expect = 0.13
Identities = 41/166 (24%), Positives = 76/166 (45%), Gaps = 2/166 (1%)
Frame = +2
Query: 80 QFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAG 259
+ +L ++G S GK++L+ + G + P G F + + I+ + + L + D G
Sbjct: 78 EMKLGIVGTSQSGKTALVHRYLTGTYTPDESPEGGR--FKKEVVIEGQSHLLL-IRDE-G 133
Query: 260 QERFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRPVFALVGCKLDL 439
Q+ + + ++V + V++V + S++ I E ++ LVG K
Sbjct: 134 QQHL-DVQFCQWVDAV--VFVFNVCSIQSYDSIQALAHEMSKYRNISDLPLILVGTK--- 187
Query: 440 VGSDNKSESRREVSCEEA--RLFAEENGLHHIETSAKTGLNVEQAF 571
D+ SE R V E+ +L A+ + ETS+ G NVE+ F
Sbjct: 188 ---DHISEKRARVITEDEGRQLAAQMKRCSYFETSSTYGTNVERVF 230
>AJ132701-1|CAA10737.1| 1107|Caenorhabditis elegans centaurin gamma
1B protein.
Length = 1107
Score = 33.1 bits (72), Expect = 0.17
Identities = 42/166 (25%), Positives = 72/166 (43%), Gaps = 2/166 (1%)
Frame = +2
Query: 80 QFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTAG 259
+ +L ++G S GK++L+ + G + P G +IE Q L L G
Sbjct: 234 EMKLGIVGTSQSGKTALVHRYLTGTYTPDESPEGGRFKGEVVIEGQS----HLLLIRDEG 289
Query: 260 QERFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRPVFALVGCKLDL 439
Q+ + + ++V + V++V + S++ I E ++ LVG K
Sbjct: 290 QQHL-DVQFCQWVDAV--VFVFNVCSIQSYDSIQALAHEMSKYRNISDLPLILVGTK--- 343
Query: 440 VGSDNKSESRREVSCEEA--RLFAEENGLHHIETSAKTGLNVEQAF 571
D+ SE R V E+ +L A+ + ETS+ G NVE+ F
Sbjct: 344 ---DHISEKRARVITEDEGRQLAAQMKRCSYFETSSTYGTNVERVF 386
>U70855-4|AAB09163.1| 625|Caenorhabditis elegans Hypothetical
protein K08F11.5 protein.
Length = 625
Score = 31.9 bits (69), Expect = 0.40
Identities = 43/176 (24%), Positives = 77/176 (43%), Gaps = 4/176 (2%)
Frame = +2
Query: 86 RLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEIQDGT--RIKLQLWDTAG 259
R++LIGD GK+SL+ + ++ + + R++ D T + + D +
Sbjct: 11 RIVLIGDEGCGKTSLVMSLLEDEWVDAVPRRLD-----RVLIPADVTPENVTTSIVDLSI 65
Query: 260 QERFRSITKSYYRNSVGALLVYDVSNRSSFEHIPL-WMMEAKRHI-EPHRPVFALVGCKL 433
+E + S R + +VY V++ S+ + I W+ ++ E H LVG K
Sbjct: 66 KEEDENWIVSEIRQANVICVVYSVTDESTVDGIQTKWLPLIRQSFGEYHETPVILVGNKS 125
Query: 434 DLVGSDNKSESRREVSCEEARLFAEENGLHHIETSAKTGLNVEQAFVLVAQEVYQP 601
D G+ N ++ + + EA E +E SA+T NV + F + V P
Sbjct: 126 D--GTANNTD--KILPIMEANTEVET----CVECSARTMKNVSEIFYYAQKAVIYP 173
>AL117200-14|CAJ85779.1| 465|Caenorhabditis elegans Hypothetical
protein Y50E8A.4c protein.
Length = 465
Score = 30.7 bits (66), Expect = 0.93
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +2
Query: 47 IKKMVDPIFDYQFRLILIGDSTVGKSSLLKYFTDGK--FAELSDPTVGVDFFARIIEI-Q 217
+KK V+ F QF L+ +G++ GK++L++ + K F + V+ ++ +
Sbjct: 90 VKKAVEAGF--QFNLMCVGETGTGKTTLIESLFNMKLDFEPCNHELKTVELRTCTKDVAE 147
Query: 218 DGTRIKLQLWDTAG 259
G R+KL+L +TAG
Sbjct: 148 GGIRVKLRLVETAG 161
>AL117200-12|CAB60583.1| 461|Caenorhabditis elegans Hypothetical
protein Y50E8A.4b protein.
Length = 461
Score = 30.7 bits (66), Expect = 0.93
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +2
Query: 47 IKKMVDPIFDYQFRLILIGDSTVGKSSLLKYFTDGK--FAELSDPTVGVDFFARIIEI-Q 217
+KK V+ F QF L+ +G++ GK++L++ + K F + V+ ++ +
Sbjct: 90 VKKAVEAGF--QFNLMCVGETGTGKTTLIESLFNMKLDFEPCNHELKTVELRTCTKDVAE 147
Query: 218 DGTRIKLQLWDTAG 259
G R+KL+L +TAG
Sbjct: 148 GGIRVKLRLVETAG 161
>AL117200-11|CAD54172.1| 530|Caenorhabditis elegans Hypothetical
protein Y50E8A.4a protein.
Length = 530
Score = 30.7 bits (66), Expect = 0.93
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +2
Query: 47 IKKMVDPIFDYQFRLILIGDSTVGKSSLLKYFTDGK--FAELSDPTVGVDFFARIIEI-Q 217
+KK V+ F QF L+ +G++ GK++L++ + K F + V+ ++ +
Sbjct: 159 VKKAVEAGF--QFNLMCVGETGTGKTTLIESLFNMKLDFEPCNHELKTVELRTCTKDVAE 216
Query: 218 DGTRIKLQLWDTAG 259
G R+KL+L +TAG
Sbjct: 217 GGIRVKLRLVETAG 230
>Z78018-7|CAB01449.2| 2577|Caenorhabditis elegans Hypothetical
protein F15B9.7 protein.
Length = 2577
Score = 29.9 bits (64), Expect = 1.6
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 2/100 (2%)
Frame = -2
Query: 352 FETGSV--RDVVHQQSSNGVSIIRFRDGTESLLSSRVPEL*FNPCSILDLDDSSEEIYAH 179
+ TG V R+ + ++S ++IR +DG + LSS VP L N ++D++D + + A
Sbjct: 427 YSTGEVTLRERIDAKNSPITAVIRAKDGAQPALSSTVP-LTIN---VIDINDHAPTLIAA 482
Query: 178 SRIR*LSELPVCKILKQRTLADRAISD*DKPELIIKYRID 59
++ L E + + AI + P IIKY ++
Sbjct: 483 QKMITLEENVA---IGEEVGRVYAIDEDSGPNGIIKYSME 519
>Z78013-10|CAB01427.2| 2577|Caenorhabditis elegans Hypothetical
protein F15B9.7 protein.
Length = 2577
Score = 29.9 bits (64), Expect = 1.6
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 2/100 (2%)
Frame = -2
Query: 352 FETGSV--RDVVHQQSSNGVSIIRFRDGTESLLSSRVPEL*FNPCSILDLDDSSEEIYAH 179
+ TG V R+ + ++S ++IR +DG + LSS VP L N ++D++D + + A
Sbjct: 427 YSTGEVTLRERIDAKNSPITAVIRAKDGAQPALSSTVP-LTIN---VIDINDHAPTLIAA 482
Query: 178 SRIR*LSELPVCKILKQRTLADRAISD*DKPELIIKYRID 59
++ L E + + AI + P IIKY ++
Sbjct: 483 QKMITLEENVA---IGEEVGRVYAIDEDSGPNGIIKYSME 519
>AY314773-1|AAQ84880.1| 2596|Caenorhabditis elegans flamingo-like
protein FMI-1 protein.
Length = 2596
Score = 29.9 bits (64), Expect = 1.6
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 2/100 (2%)
Frame = -2
Query: 352 FETGSV--RDVVHQQSSNGVSIIRFRDGTESLLSSRVPEL*FNPCSILDLDDSSEEIYAH 179
+ TG V R+ + ++S ++IR +DG + LSS VP L N ++D++D + + A
Sbjct: 427 YSTGEVTLRERIDAKNSPITAVIRAKDGAQPALSSTVP-LTIN---VIDINDHAPTLIAA 482
Query: 178 SRIR*LSELPVCKILKQRTLADRAISD*DKPELIIKYRID 59
++ L E + + AI + P IIKY ++
Sbjct: 483 QKMITLEENVA---IGEEVGRVYAIDEDSGPNGIIKYSME 519
>Z92780-1|CAB07174.1| 1186|Caenorhabditis elegans Hypothetical
protein C45G3.1 protein.
Length = 1186
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +3
Query: 189 ISSLESSRSKMEQGLNYNSGTRLDRRDSVPSRNRIIETPL 308
+S + SSR M+ +N T RDS+ S N++ +TPL
Sbjct: 625 LSQIPSSRQSMDS--TFNDATFTVSRDSIESMNKMQKTPL 662
>AF357878-1|AAK27716.1| 589|Caenorhabditis elegans
receptor-mediated endocytosis 1isoform I protein.
Length = 589
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/75 (21%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +2
Query: 62 DPIFDYQFRLILIGDSTVGKSSLLKYFTDGKFAELS-DPTVGVDFFARIIEIQDGTRIKL 238
DP FD + ++L+G + GK++ ++Y + F + P D F ++ + I
Sbjct: 86 DPDFDAKPMILLVGQYSTGKTTFIRYLLESDFPGIRIGPEPTTDRFIAVMHGDEEGSIPG 145
Query: 239 QLWDTAGQERFRSIT 283
+++FR+++
Sbjct: 146 NALVVDAKKQFRALS 160
>AF357877-1|AAK27715.1| 835|Caenorhabditis elegans
receptor-mediated endocytosis 1isoform II protein.
Length = 835
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/75 (21%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +2
Query: 62 DPIFDYQFRLILIGDSTVGKSSLLKYFTDGKFAELS-DPTVGVDFFARIIEIQDGTRIKL 238
DP FD + ++L+G + GK++ ++Y + F + P D F ++ + I
Sbjct: 332 DPDFDAKPMILLVGQYSTGKTTFIRYLLESDFPGIRIGPEPTTDRFIAVMHGDEEGSIPG 391
Query: 239 QLWDTAGQERFRSIT 283
+++FR+++
Sbjct: 392 NALVVDAKKQFRALS 406
>AF357876-1|AAK27714.1| 576|Caenorhabditis elegans
receptor-mediated endocytosis 1isoform IV protein.
Length = 576
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/75 (21%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +2
Query: 62 DPIFDYQFRLILIGDSTVGKSSLLKYFTDGKFAELS-DPTVGVDFFARIIEIQDGTRIKL 238
DP FD + ++L+G + GK++ ++Y + F + P D F ++ + I
Sbjct: 68 DPDFDAKPMILLVGQYSTGKTTFIRYLLESDFPGIRIGPEPTTDRFIAVMHGDEEGSIPG 127
Query: 239 QLWDTAGQERFRSIT 283
+++FR+++
Sbjct: 128 NALVVDAKKQFRALS 142
>AC024853-3|ABP57809.1| 244|Caenorhabditis elegans Hypothetical
protein Y71F9AR.2 protein.
Length = 244
Score = 29.5 bits (63), Expect = 2.1
Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 4/162 (2%)
Frame = +2
Query: 80 QFRLILIGDSTVGKSSL-LKYFTDGKFAELSDPTVGVDFFARIIEIQDGTRIKLQLWDTA 256
+ + L+G + GKS++ +KY T +F D T+ ++ + E G + + + DT
Sbjct: 9 ELHVALVGMAGSGKSAIAVKYITK-RFIGEYDSTLEDNYCRQ--ETVGGQSLMVWMMDTV 65
Query: 257 GQERFRSITKSYYRNSVGA---LLVYDVSNRSSFEHIPLWMMEAKRHIEPHRPVFALVGC 427
+ TK R A ++VYDV+++ SF++ ++E I H V
Sbjct: 66 -----ENATKDEMRWIAWADVYVVVYDVTSQLSFQYAE-GILE---RISRHEHVLCPREH 116
Query: 428 KLDLVGSDNKSESRREVSCEEARLFAEENGLHHIETSAKTGL 553
+ LVG+ E R+VS E A ++ E SA L
Sbjct: 117 RTLLVGNKTDLERYRQVSETEGERLASQHKAQFAECSAAIDL 158
>AC006695-15|AAO25981.1| 555|Caenorhabditis elegans Receptor
mediated endocytosis protein1, isoform f protein.
Length = 555
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/75 (21%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +2
Query: 62 DPIFDYQFRLILIGDSTVGKSSLLKYFTDGKFAELS-DPTVGVDFFARIIEIQDGTRIKL 238
DP FD + ++L+G + GK++ ++Y + F + P D F ++ + I
Sbjct: 52 DPDFDAKPMILLVGQYSTGKTTFIRYLLESDFPGIRIGPEPTTDRFIAVMHGDEEGSIPG 111
Query: 239 QLWDTAGQERFRSIT 283
+++FR+++
Sbjct: 112 NALVVDAKKQFRALS 126
>AC006695-14|AAK73902.2| 576|Caenorhabditis elegans Receptor
mediated endocytosis protein1, isoform d protein.
Length = 576
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/75 (21%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +2
Query: 62 DPIFDYQFRLILIGDSTVGKSSLLKYFTDGKFAELS-DPTVGVDFFARIIEIQDGTRIKL 238
DP FD + ++L+G + GK++ ++Y + F + P D F ++ + I
Sbjct: 68 DPDFDAKPMILLVGQYSTGKTTFIRYLLESDFPGIRIGPEPTTDRFIAVMHGDEEGSIPG 127
Query: 239 QLWDTAGQERFRSIT 283
+++FR+++
Sbjct: 128 NALVVDAKKQFRALS 142
>AC006695-13|AAF39978.1| 786|Caenorhabditis elegans Receptor
mediated endocytosis protein1, isoform a protein.
Length = 786
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/75 (21%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +2
Query: 62 DPIFDYQFRLILIGDSTVGKSSLLKYFTDGKFAELS-DPTVGVDFFARIIEIQDGTRIKL 238
DP FD + ++L+G + GK++ ++Y + F + P D F ++ + I
Sbjct: 283 DPDFDAKPMILLVGQYSTGKTTFIRYLLESDFPGIRIGPEPTTDRFIAVMHGDEEGSIPG 342
Query: 239 QLWDTAGQERFRSIT 283
+++FR+++
Sbjct: 343 NALVVDAKKQFRALS 357
>AC006695-12|AAL65796.1| 613|Caenorhabditis elegans Receptor
mediated endocytosis protein1, isoform e protein.
Length = 613
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/75 (21%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +2
Query: 62 DPIFDYQFRLILIGDSTVGKSSLLKYFTDGKFAELS-DPTVGVDFFARIIEIQDGTRIKL 238
DP FD + ++L+G + GK++ ++Y + F + P D F ++ + I
Sbjct: 110 DPDFDAKPMILLVGQYSTGKTTFIRYLLESDFPGIRIGPEPTTDRFIAVMHGDEEGSIPG 169
Query: 239 QLWDTAGQERFRSIT 283
+++FR+++
Sbjct: 170 NALVVDAKKQFRALS 184
>AC006695-11|AAF39979.1| 835|Caenorhabditis elegans Receptor
mediated endocytosis protein1, isoform b protein.
Length = 835
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/75 (21%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +2
Query: 62 DPIFDYQFRLILIGDSTVGKSSLLKYFTDGKFAELS-DPTVGVDFFARIIEIQDGTRIKL 238
DP FD + ++L+G + GK++ ++Y + F + P D F ++ + I
Sbjct: 332 DPDFDAKPMILLVGQYSTGKTTFIRYLLESDFPGIRIGPEPTTDRFIAVMHGDEEGSIPG 391
Query: 239 QLWDTAGQERFRSIT 283
+++FR+++
Sbjct: 392 NALVVDAKKQFRALS 406
>AC006695-10|AAF39980.1| 589|Caenorhabditis elegans Receptor
mediated endocytosis protein1, isoform c protein.
Length = 589
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/75 (21%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +2
Query: 62 DPIFDYQFRLILIGDSTVGKSSLLKYFTDGKFAELS-DPTVGVDFFARIIEIQDGTRIKL 238
DP FD + ++L+G + GK++ ++Y + F + P D F ++ + I
Sbjct: 86 DPDFDAKPMILLVGQYSTGKTTFIRYLLESDFPGIRIGPEPTTDRFIAVMHGDEEGSIPG 145
Query: 239 QLWDTAGQERFRSIT 283
+++FR+++
Sbjct: 146 NALVVDAKKQFRALS 160
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 28.3 bits (60), Expect = 4.9
Identities = 32/122 (26%), Positives = 52/122 (42%)
Frame = +2
Query: 236 LQLWDTAGQERFRSITKSYYRNSVGALLVYDVSNRSSFEHIPLWMMEAKRHIEPHRPVFA 415
L L DT G F + G LL+ + + I + + +++I+ +
Sbjct: 104 LNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQGVQAQTIANFWLAFEKNIQ----IIP 159
Query: 416 LVGCKLDLVGSDNKSESRREVSCEEARLFAEENGLHHIETSAKTGLNVEQAFVLVAQEVY 595
++ K+DL G+D KS E + F E LH SAK+GLNV++ + V
Sbjct: 160 VIN-KIDLPGADIKSV---ETQLKNLFEFNPEECLH---ISAKSGLNVDKVLEAIIDRVP 212
Query: 596 QP 601
P
Sbjct: 213 AP 214
>AL032654-8|CAB63390.1| 174|Caenorhabditis elegans Hypothetical
protein Y52B11A.8 protein.
Length = 174
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = -3
Query: 231 ILVPSWISMILAKKSTPTVGSDSSANFPSVKYLSRELLPTVLSPI 97
+LV +WI + +A +TPT + S P+ LS ++L L P+
Sbjct: 4 LLVATWIFVSVAASATPTTTTKSPP--PTTTTLSPQILKAKLPPV 46
>U23938-1|AAA65452.1| 35|Caenorhabditis elegans pra-1 protein.
Length = 35
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 92 ILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDF 193
++IG+S VGKSSL+ F D ++GV F
Sbjct: 1 LIIGESGVGKSSLMLRFVDDVVDPERAVSIGVPF 34
>AL031630-10|CAA20990.1| 363|Caenorhabditis elegans Hypothetical
protein Y38H6C.11 protein.
Length = 363
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = -2
Query: 361 WYMFETGSVRDVVHQQSSNGVSIIRFRDGTESLLSSRVPEL*FNPCSILDLDDSSEEIY 185
W +R+V+ Q SIIR TE +L+ ++PE N + L+ D + + Y
Sbjct: 30 WQKLPEDIMREVLKQLDFEDRSIIRQCSRTEMILADKIPEN-LNSINFLEGSDPTNKKY 87
>AL032631-16|CAB63338.2| 156|Caenorhabditis elegans Hypothetical
protein Y106G6H.8 protein.
Length = 156
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/62 (27%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
Frame = -1
Query: 557 HLIQFLLMFLCDVGRFPQQKAWLLHMTLLVLIHSCYHFRLGRAYSQPMRTLVCEV-LCAS 381
HLI L + RFP A L + + CYH+ + + T + V L +
Sbjct: 91 HLIHSLALLASPAARFPLVTAGLFTAGITLFCGPCYHYSISGVETTRKYTPIGGVTLIIA 150
Query: 380 WL 375
WL
Sbjct: 151 WL 152
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,740,306
Number of Sequences: 27780
Number of extensions: 307323
Number of successful extensions: 1191
Number of sequences better than 10.0: 135
Number of HSP's better than 10.0 without gapping: 1025
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1062
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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