Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc7m02
         (691 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q2QMG8 Cluster: Tesmin/TSO1-like CXC domain containing ...    38   0.31 
UniRef50_A2Y6D7 Cluster: Putative uncharacterized protein; n=2; ...    37   0.53 
UniRef50_Q9XZ29 Cluster: CG8590-PA; n=3; Sophophora|Rep: CG8590-...    36   0.71 
UniRef50_UPI0000DB7E61 Cluster: PREDICTED: similar to Kinesin-li...    35   1.6  
UniRef50_Q705X1 Cluster: Cysteine-rich polycomb-like protein; n=...    35   1.6  
UniRef50_Q7QFN0 Cluster: ENSANGP00000017323; n=1; Anopheles gamb...    35   1.6  
UniRef50_UPI00015B4DD2 Cluster: PREDICTED: hypothetical protein;...    33   5.0  
UniRef50_A0CPS4 Cluster: Chromosome undetermined scaffold_23, wh...    33   5.0  
UniRef50_A6DE01 Cluster: Glycosyl transferase, family 2; n=1; Ca...    33   6.6  
UniRef50_A0E0L8 Cluster: Chromosome undetermined scaffold_71, wh...    33   8.7  

>UniRef50_Q2QMG8 Cluster: Tesmin/TSO1-like CXC domain containing
           protein, expressed; n=3; Oryza sativa|Rep:
           Tesmin/TSO1-like CXC domain containing protein,
           expressed - Oryza sativa subsp. japonica (Rice)
          Length = 407

 Score = 37.5 bits (83), Expect = 0.31
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = +2

Query: 101 QSTGTGQGFKKCLCKKN-CATSRCLCFKNKVL*TSKCHSSLPCKNK*LYGLTK 256
           + T  G+G K C CKK+ C    C+CF +    +  C    PC NK ++G+ +
Sbjct: 92  RKTDEGEGCKSCSCKKSKCLKLYCVCFASGSHCSESCGCD-PCYNKSIHGVPR 143


>UniRef50_A2Y6D7 Cluster: Putative uncharacterized protein; n=2;
           Oryza sativa|Rep: Putative uncharacterized protein -
           Oryza sativa subsp. indica (Rice)
          Length = 385

 Score = 36.7 bits (81), Expect = 0.53
 Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = +2

Query: 98  LQSTGTGQGFKKCLCKKN-CATSRCLCFKNKVL*TSKCHSSLPCKNK*LYGLT 253
           ++ +  G G K C CKK+ C    C CF      + KC    PC NK LY  T
Sbjct: 76  VEESADGNGCKHCACKKSRCLKLYCPCFAGGGYCSEKC-GCQPCFNKALYAET 127


>UniRef50_Q9XZ29 Cluster: CG8590-PA; n=3; Sophophora|Rep: CG8590-PA -
            Drosophila melanogaster (Fruit fly)
          Length = 1212

 Score = 36.3 bits (80), Expect = 0.71
 Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
 Frame = +2

Query: 68   TSLALRSVANLQSTGT---GQGFKKCLCKKNCATSRCLCFKNKVL*TSKCHSSLPCKN 232
            TSL   S+ +L ST     G+  K C C+  C T RC C       +  C     C+N
Sbjct: 1053 TSLGNSSIQSLNSTSATEDGKRCKGCKCRTKCTTKRCGCLSGNNACSETCVCKSNCRN 1110


>UniRef50_UPI0000DB7E61 Cluster: PREDICTED: similar to Kinesin-like
            protein at 3A CG8590-PA; n=1; Apis mellifera|Rep:
            PREDICTED: similar to Kinesin-like protein at 3A
            CG8590-PA - Apis mellifera
          Length = 1064

 Score = 35.1 bits (77), Expect = 1.6
 Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = +2

Query: 113  TGQGFKKCLCKKNCATSRCLCFKNKVL*TSKCHSSLP-CKNK 235
            T  G  KC CK  CAT  C C K K +  + C  +L  C+N+
Sbjct: 965  TLNGDIKCNCKTTCATRICKCRKRKAICGNNCKCTLEHCQNR 1006


>UniRef50_Q705X1 Cluster: Cysteine-rich polycomb-like protein; n=3;
           core eudicotyledons|Rep: Cysteine-rich polycomb-like
           protein - Lotus japonicus
          Length = 897

 Score = 35.1 bits (77), Expect = 1.6
 Identities = 21/49 (42%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = +2

Query: 104 STGTGQGFKKCLCKKN-CATSRCLCFKNKVL*TSKCHSSLPCKNK*LYG 247
           ST  G G K+C CKK+ C    C CF   V     C S   C NK  YG
Sbjct: 501 STADGNGCKRCNCKKSKCLKLYCDCFAAGVFCLDPC-SCQDCFNKPEYG 548


>UniRef50_Q7QFN0 Cluster: ENSANGP00000017323; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000017323 - Anopheles gambiae
           str. PEST
          Length = 211

 Score = 35.1 bits (77), Expect = 1.6
 Identities = 15/41 (36%), Positives = 18/41 (43%)
 Frame = +2

Query: 113 TGQGFKKCLCKKNCATSRCLCFKNKVL*TSKCHSSLPCKNK 235
           TG G   C C  NC + RC C K   L  + C     C N+
Sbjct: 93  TGGGSASCSCTGNCGSRRCGCHKQDSLCGASCRCPPTCVNR 133


>UniRef50_UPI00015B4DD2 Cluster: PREDICTED: hypothetical protein; n=1;
            Nasonia vitripennis|Rep: PREDICTED: hypothetical protein
            - Nasonia vitripennis
          Length = 1080

 Score = 33.5 bits (73), Expect = 5.0
 Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
 Frame = +2

Query: 71   SLALRSVANLQSTGTGQGFKKCLCKKNCATSRCLCFKNKV-L*TSKCHSSLPCKNK 235
            +LA  S   L+ +  G+   KC CK +C +  C C KN+V      C+  + CKN+
Sbjct: 1003 NLARESKVGLKRSSNGE--IKCSCKTSCTSRLCSCRKNEVSCQNCNCNPEI-CKNR 1055


>UniRef50_A0CPS4 Cluster: Chromosome undetermined scaffold_23, whole
           genome shotgun sequence; n=4; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_23,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 235

 Score = 33.5 bits (73), Expect = 5.0
 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = +2

Query: 125 FKKCLCKK-NCATSRCLCFKNKVL*TSKCHSSLPCKNK 235
           F  C C+K NC+   C C K  +  TSKC+    C N+
Sbjct: 185 FNGCNCRKQNCSKRYCECQKRNIKCTSKCNCCEECVNQ 222


>UniRef50_A6DE01 Cluster: Glycosyl transferase, family 2; n=1;
           Caminibacter mediatlanticus TB-2|Rep: Glycosyl
           transferase, family 2 - Caminibacter mediatlanticus TB-2
          Length = 349

 Score = 33.1 bits (72), Expect = 6.6
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +3

Query: 159 HQDVCVLKIKYYELPNAIRAYPAKINSY 242
           H  +C   +KYY+ PN I+AY  KIN +
Sbjct: 175 HIGICGSVLKYYDNPNEIQAYGGKINRF 202


>UniRef50_A0E0L8 Cluster: Chromosome undetermined scaffold_71, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_71,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 1162

 Score = 32.7 bits (71), Expect = 8.7
 Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
 Frame = -2

Query: 252 VSPYSYLFLQGKLEWHLEVH---NTLFLKHRHLDVAQFFLQRHFLNP 121
           ++P + LF QGK  W +++    NTLFL +R  +  Q + Q   +NP
Sbjct: 119 INPNNSLFFQGKGTWSIQLFFLANTLFLTNRFEEALQNYDQAIHINP 165


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 552,511,454
Number of Sequences: 1657284
Number of extensions: 9386184
Number of successful extensions: 20789
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 20233
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20783
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54132236449
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)