Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc7m02
         (691 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    22   4.1  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   7.2  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    21   7.2  
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    21   7.2  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    21   7.2  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    21   7.2  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   9.5  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   9.5  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   9.5  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    21   9.5  

>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +1

Query: 307 IIRLITCQMKI*FYKNKYK 363
           IIRL   Q+KI F  ++YK
Sbjct: 76  IIRLTPTQVKIWFQNHRYK 94


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 12/41 (29%), Positives = 15/41 (36%)
 Frame = +3

Query: 72  VLHYGQLPTCNPLEPARDLRSAFARKTVLHQDVCVLKIKYY 194
           V H     TC P  P  D+ S      V     C  + K+Y
Sbjct: 640 VRHVMAPSTCQPQNPDNDVHSIVDDSDVGPSGDCFYENKFY 680


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/27 (25%), Positives = 14/27 (51%)
 Frame = +2

Query: 104 STGTGQGFKKCLCKKNCATSRCLCFKN 184
           + G      KC C + C++++   F+N
Sbjct: 180 AAGKASNGNKCCCLRTCSSAKRPKFEN 206


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +2

Query: 248 LTKYYNIKIYF 280
           L KY N+KIYF
Sbjct: 121 LEKYPNVKIYF 131


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +2

Query: 248 LTKYYNIKIYF 280
           L KY N+KIYF
Sbjct: 121 LEKYPNVKIYF 131


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +2

Query: 248 LTKYYNIKIYF 280
           L KY N+KIYF
Sbjct: 121 LEKYPNVKIYF 131


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +2

Query: 38  RYWWVRGDSGT 70
           RY W+ G++GT
Sbjct: 230 RYQWIAGNAGT 240


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +2

Query: 38  RYWWVRGDSGT 70
           RY W+ G++GT
Sbjct: 230 RYQWIAGNAGT 240


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -3

Query: 125 IPGRFQWIASWQLTVVQDSSRCPRVPTNI 39
           + GRF+ I      ++ DS +  R PT +
Sbjct: 196 LEGRFRVINDGIQALINDSRKVTRFPTEL 224


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/26 (34%), Positives = 11/26 (42%)
 Frame = +1

Query: 1   DFLNSNRKCKTFKILVGTRGQRDESC 78
           D LN   KC +  +L     Q  E C
Sbjct: 58  DALNEGNKCYSKDLLFNLPAQGSEDC 83


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,417
Number of Sequences: 336
Number of extensions: 2780
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)