Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc7l23
         (695 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A4HJ44 Cluster: Putative uncharacterized protein; n=1; ...    34   2.9  
UniRef50_O74852 Cluster: Membrane transporter; n=1; Schizosaccha...    33   5.1  

>UniRef50_A4HJ44 Cluster: Putative uncharacterized protein; n=1;
           Leishmania braziliensis|Rep: Putative uncharacterized
           protein - Leishmania braziliensis
          Length = 1904

 Score = 34.3 bits (75), Expect = 2.9
 Identities = 31/91 (34%), Positives = 39/91 (42%), Gaps = 1/91 (1%)
 Frame = -2

Query: 394 TVDALLDLQRH*PGGITSRFEDRPLPLNPVVSYAETPFVLFRLTSCSNARRLHRVSPGHL 215
           T  AL  LQR          +  P P + VV    TP V+   TSC+NA    R S  HL
Sbjct: 217 TAAALCTLQRFTGTNGQCSPQAMPPPTSIVVPAVATPVVIKDQTSCNNASVCLRDSVQHL 276

Query: 214 PSRKLWSLTQHHLQQMTRDSWRP-MIGLVNN 125
             R   S    HL  ++  S    ++GL NN
Sbjct: 277 TERGDPSAHHPHLSPLSSSSSASRILGLDNN 307


>UniRef50_O74852 Cluster: Membrane transporter; n=1;
           Schizosaccharomyces pombe|Rep: Membrane transporter -
           Schizosaccharomyces pombe (Fission yeast)
          Length = 448

 Score = 33.5 bits (73), Expect = 5.1
 Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
 Frame = -3

Query: 582 HTALFSAYN----LRRFYG*LVRRFAKVFSNYVTKIISLNLLCF 463
           +T LFSAYN    L    G LV  F +   N++T I  L+LLCF
Sbjct: 388 YTQLFSAYNIVYSLGMIIGPLVAGFLRDQFNFITSIACLSLLCF 431


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 670,832,260
Number of Sequences: 1657284
Number of extensions: 13480015
Number of successful extensions: 33899
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 32767
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33893
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54958682807
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)