Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc7l23
(695 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S61883-1|AAB26991.2| 2068|Drosophila melanogaster transcription ... 29 6.0
BT024196-1|ABC86258.1| 1964|Drosophila melanogaster RE63802p pro... 29 6.0
BT004888-1|AAO47866.1| 2096|Drosophila melanogaster RE74933p pro... 29 6.0
AE014297-491|AAF54102.3| 2065|Drosophila melanogaster CG17603-PA... 29 6.0
AE014297-490|AAS65117.1| 2098|Drosophila melanogaster CG17603-PC... 29 6.0
AE014297-489|AAS65116.1| 2129|Drosophila melanogaster CG17603-PB... 29 6.0
AE001572-25|AAD19815.1| 2065|Drosophila melanogaster transcripti... 29 6.0
AY064174-1|AAL47186.1| 1984|Drosophila melanogaster rho GTPase g... 29 8.0
AY060795-1|AAL28343.1| 599|Drosophila melanogaster GH26207p pro... 29 8.0
AE014296-900|AAF47940.2| 1984|Drosophila melanogaster CG32239-PA... 29 8.0
>S61883-1|AAB26991.2| 2068|Drosophila melanogaster transcription
factor TFIID 230kda subunit protein.
Length = 2068
Score = 29.1 bits (62), Expect = 6.0
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -1
Query: 263 ELFEREASPSRLAWTSSLSEIMELDSTSPPTDD 165
EL E S S+L S L E+++L PP+DD
Sbjct: 51 ELRENIGSLSKLGLDSMLLEVIDLKEAEPPSDD 83
>BT024196-1|ABC86258.1| 1964|Drosophila melanogaster RE63802p
protein.
Length = 1964
Score = 29.1 bits (62), Expect = 6.0
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -1
Query: 263 ELFEREASPSRLAWTSSLSEIMELDSTSPPTDD 165
EL E S S+L S L E+++L PP+DD
Sbjct: 51 ELRENIGSLSKLGLDSMLLEVIDLKEAEPPSDD 83
>BT004888-1|AAO47866.1| 2096|Drosophila melanogaster RE74933p
protein.
Length = 2096
Score = 29.1 bits (62), Expect = 6.0
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -1
Query: 263 ELFEREASPSRLAWTSSLSEIMELDSTSPPTDD 165
EL E S S+L S L E+++L PP+DD
Sbjct: 51 ELRENIGSLSKLGLDSMLLEVIDLKEAEPPSDD 83
>AE014297-491|AAF54102.3| 2065|Drosophila melanogaster CG17603-PA,
isoform A protein.
Length = 2065
Score = 29.1 bits (62), Expect = 6.0
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -1
Query: 263 ELFEREASPSRLAWTSSLSEIMELDSTSPPTDD 165
EL E S S+L S L E+++L PP+DD
Sbjct: 51 ELRENIGSLSKLGLDSMLLEVIDLKEAEPPSDD 83
>AE014297-490|AAS65117.1| 2098|Drosophila melanogaster CG17603-PC,
isoform C protein.
Length = 2098
Score = 29.1 bits (62), Expect = 6.0
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -1
Query: 263 ELFEREASPSRLAWTSSLSEIMELDSTSPPTDD 165
EL E S S+L S L E+++L PP+DD
Sbjct: 51 ELRENIGSLSKLGLDSMLLEVIDLKEAEPPSDD 83
>AE014297-489|AAS65116.1| 2129|Drosophila melanogaster CG17603-PB,
isoform B protein.
Length = 2129
Score = 29.1 bits (62), Expect = 6.0
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -1
Query: 263 ELFEREASPSRLAWTSSLSEIMELDSTSPPTDD 165
EL E S S+L S L E+++L PP+DD
Sbjct: 51 ELRENIGSLSKLGLDSMLLEVIDLKEAEPPSDD 83
>AE001572-25|AAD19815.1| 2065|Drosophila melanogaster transcription
factor protein.
Length = 2065
Score = 29.1 bits (62), Expect = 6.0
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -1
Query: 263 ELFEREASPSRLAWTSSLSEIMELDSTSPPTDD 165
EL E S S+L S L E+++L PP+DD
Sbjct: 51 ELRENIGSLSKLGLDSMLLEVIDLKEAEPPSDD 83
>AY064174-1|AAL47186.1| 1984|Drosophila melanogaster rho GTPase
guanine nucleotideexchange factor GEF64C protein.
Length = 1984
Score = 28.7 bits (61), Expect = 8.0
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 11/61 (18%)
Frame = -2
Query: 244 RLHRVSPGHLPSRKLWSLTQ-------HHLQQMTRD----SWRPMIGLVNNTRNDCKITL 98
RL++V+P HL R+L Q +H+ Q +D WR + N R C+I +
Sbjct: 1748 RLYKVTPSHLEGRELLKQAQEKIELHLNHINQEAKDVPTKLWRRISSSSPNRRASCEIDM 1807
Query: 97 I 95
I
Sbjct: 1808 I 1808
>AY060795-1|AAL28343.1| 599|Drosophila melanogaster GH26207p
protein.
Length = 599
Score = 28.7 bits (61), Expect = 8.0
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 11/61 (18%)
Frame = -2
Query: 244 RLHRVSPGHLPSRKLWSLTQ-------HHLQQMTRD----SWRPMIGLVNNTRNDCKITL 98
RL++V+P HL R+L Q +H+ Q +D WR + N R C+I +
Sbjct: 363 RLYKVTPSHLEGRELLKQAQEKIELHLNHINQEAKDVPTKLWRRISSSSPNRRASCEIDM 422
Query: 97 I 95
I
Sbjct: 423 I 423
>AE014296-900|AAF47940.2| 1984|Drosophila melanogaster CG32239-PA
protein.
Length = 1984
Score = 28.7 bits (61), Expect = 8.0
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 11/61 (18%)
Frame = -2
Query: 244 RLHRVSPGHLPSRKLWSLTQ-------HHLQQMTRD----SWRPMIGLVNNTRNDCKITL 98
RL++V+P HL R+L Q +H+ Q +D WR + N R C+I +
Sbjct: 1748 RLYKVTPSHLEGRELLKQAQEKIELHLNHINQEAKDVPTKLWRRISSSSPNRRASCEIDM 1807
Query: 97 I 95
I
Sbjct: 1808 I 1808
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,854,494
Number of Sequences: 53049
Number of extensions: 607706
Number of successful extensions: 1319
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1263
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1319
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3046624548
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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