Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc7l16
         (633 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7D5T6 Cluster: Putative uncharacterized protein; n=1; ...    38   0.15 
UniRef50_A4TF67 Cluster: Putative outer membrane adhesin like pr...    35   1.9  
UniRef50_UPI0000D55472 Cluster: PREDICTED: similar to Patched pr...    34   3.3  
UniRef50_UPI00015B5B2F Cluster: PREDICTED: similar to putative h...    33   5.7  
UniRef50_Q3W7Q9 Cluster: ABC transporter, transmembrane region:A...    33   7.5  
UniRef50_Q4Q3N9 Cluster: Putative uncharacterized protein; n=3; ...    32   10.0 

>UniRef50_A7D5T6 Cluster: Putative uncharacterized protein; n=1;
           Halorubrum lacusprofundi ATCC 49239|Rep: Putative
           uncharacterized protein - Halorubrum lacusprofundi ATCC
           49239
          Length = 283

 Score = 38.3 bits (85), Expect = 0.15
 Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
 Frame = +3

Query: 426 VRRQTDSGRLHEDTGDKF-GPEIMVAP-NSEAPSNPRIVSSTQESPSAAEARHSADLYIR 599
           V +Q  +G L E TGD +   E +  P +S   + P    +T ES S A AR    LY+R
Sbjct: 48  VEQQAGAGDLAEPTGDAWESVETVSVPLSSSGAAVPGGTETTVESASVAAARTDERLYLR 107

Query: 600 TSWID 614
            SW D
Sbjct: 108 MSWSD 112


>UniRef50_A4TF67 Cluster: Putative outer membrane adhesin like
           protein precursor; n=1; Mycobacterium gilvum
           PYR-GCK|Rep: Putative outer membrane adhesin like
           protein precursor - Mycobacterium gilvum PYR-GCK
          Length = 666

 Score = 34.7 bits (76), Expect = 1.9
 Identities = 17/56 (30%), Positives = 32/56 (57%)
 Frame = +3

Query: 423 SVRRQTDSGRLHEDTGDKFGPEIMVAPNSEAPSNPRIVSSTQESPSAAEARHSADL 590
           +V R+T +GR + D GD+   +++ A   EAP  P+ + +   +PS ++   + DL
Sbjct: 83  TVSRRTATGRANGDAGDRDLDDVVAASEEEAP-EPKAIEAGSSTPSDSDEIATIDL 137


>UniRef50_UPI0000D55472 Cluster: PREDICTED: similar to Patched
           protein (Hedgehog receptor); n=1; Tribolium
           castaneum|Rep: PREDICTED: similar to Patched protein
           (Hedgehog receptor) - Tribolium castaneum
          Length = 1175

 Score = 33.9 bits (74), Expect = 3.3
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = +3

Query: 558 SAAEARHSADLYIRTSWIDAALAL 629
           S +  RH +DLY R  W+DAA+AL
Sbjct: 7   SESPGRHESDLYTRPGWVDAAVAL 30


>UniRef50_UPI00015B5B2F Cluster: PREDICTED: similar to putative
           hedgehog receptor; n=1; Nasonia vitripennis|Rep:
           PREDICTED: similar to putative hedgehog receptor -
           Nasonia vitripennis
          Length = 1791

 Score = 33.1 bits (72), Expect = 5.7
 Identities = 16/34 (47%), Positives = 19/34 (55%)
 Frame = +3

Query: 528 RIVSSTQESPSAAEARHSADLYIRTSWIDAALAL 629
           R++    + P   E     DLYIR SW DAALAL
Sbjct: 525 RLLFEILDVPDLVEITLFTDLYIRPSWTDAALAL 558


>UniRef50_Q3W7Q9 Cluster: ABC transporter, transmembrane region:ABC
           transporter; n=1; Frankia sp. EAN1pec|Rep: ABC
           transporter, transmembrane region:ABC transporter -
           Frankia sp. EAN1pec
          Length = 611

 Score = 32.7 bits (71), Expect = 7.5
 Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
 Frame = -3

Query: 622 RAASIQLVRM*RSALWRASAAEGLSCVLDTIRGFEGASELGATMI-SGP 479
           R A   L+R  R  LW A+AA+G+S  +  +  F  A+ELG  ++  GP
Sbjct: 5   RGALAALLRPIRGRLWLATAAQGVSAAVSVV-PFIAAAELGRVLLDDGP 52


>UniRef50_Q4Q3N9 Cluster: Putative uncharacterized protein; n=3;
           Leishmania|Rep: Putative uncharacterized protein -
           Leishmania major
          Length = 1576

 Score = 32.3 bits (70), Expect = 10.0
 Identities = 14/35 (40%), Positives = 26/35 (74%)
 Frame = +3

Query: 516 PSNPRIVSSTQESPSAAEARHSADLYIRTSWIDAA 620
           P +PR V++++ S SAA A++ +D+++ TS + AA
Sbjct: 742 PPSPRAVAASETSMSAAGAQNRSDVHVATSKLTAA 776


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 544,001,380
Number of Sequences: 1657284
Number of extensions: 10302096
Number of successful extensions: 26164
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 25315
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26148
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46881492319
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)