Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc7l16
(633 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC029926-1|AAH29926.1| 668|Homo sapiens SYDE1 protein protein. 31 4.5
BC018942-1|AAH18942.2| 279|Homo sapiens SYDE1 protein protein. 31 4.5
AK123686-1|BAC85676.1| 735|Homo sapiens protein ( Homo sapiens ... 31 4.5
AK023573-1|BAB14612.1| 237|Homo sapiens protein ( Homo sapiens ... 31 4.5
U34360-1|AAA98763.1| 1227|Homo sapiens LAF-4 protein. 30 7.8
BC036895-1|AAH36895.1| 608|Homo sapiens AFF3 protein protein. 30 7.8
AK127721-1|BAC87100.1| 733|Homo sapiens protein ( Homo sapiens ... 30 7.8
AK092327-1|BAC03864.1| 781|Homo sapiens protein ( Homo sapiens ... 30 7.8
AC092667-1|AAY24278.1| 291|Homo sapiens unknown protein. 30 7.8
>BC029926-1|AAH29926.1| 668|Homo sapiens SYDE1 protein protein.
Length = 668
Score = 30.7 bits (66), Expect = 4.5
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +3
Query: 477 FGPEIMVAPNSEAPSNPRIVSSTQESPSAAEARHSADL--YIRTSWIDAAL 623
FGP ++ P +AP+ PR SS SA + +H ++ Y+ SW D L
Sbjct: 490 FGPVLL--PARQAPTRPRARSSGPGLASAVDFKHHIEVLHYLLQSWPDPRL 538
>BC018942-1|AAH18942.2| 279|Homo sapiens SYDE1 protein protein.
Length = 279
Score = 30.7 bits (66), Expect = 4.5
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +3
Query: 477 FGPEIMVAPNSEAPSNPRIVSSTQESPSAAEARHSADL--YIRTSWIDAAL 623
FGP ++ P +AP+ PR SS SA + +H ++ Y+ SW D L
Sbjct: 101 FGPVLL--PARQAPTRPRARSSGPGLASAVDFKHHIEVLHYLLQSWPDPRL 149
>AK123686-1|BAC85676.1| 735|Homo sapiens protein ( Homo sapiens
cDNA FLJ41692 fis, clone HCHON2000028, highly similar
to Homo sapiens 7h3 protein mRNA. ).
Length = 735
Score = 30.7 bits (66), Expect = 4.5
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +3
Query: 477 FGPEIMVAPNSEAPSNPRIVSSTQESPSAAEARHSADL--YIRTSWIDAAL 623
FGP ++ P +AP+ PR SS SA + +H ++ Y+ SW D L
Sbjct: 557 FGPVLL--PARQAPTRPRARSSGPGLASAVDFKHHIEVLHYLLQSWPDPRL 605
>AK023573-1|BAB14612.1| 237|Homo sapiens protein ( Homo sapiens
cDNA FLJ13511 fis, clone PLACE1005331, highly similar to
Homo sapiens 7h3 protein mRNA. ).
Length = 237
Score = 30.7 bits (66), Expect = 4.5
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +3
Query: 477 FGPEIMVAPNSEAPSNPRIVSSTQESPSAAEARHSADL--YIRTSWIDAAL 623
FGP ++ P +AP+ PR SS SA + +H ++ Y+ SW D L
Sbjct: 59 FGPVLL--PARQAPTRPRARSSGPGLASAVDFKHHIEVLHYLLQSWPDPRL 107
>U34360-1|AAA98763.1| 1227|Homo sapiens LAF-4 protein.
Length = 1227
Score = 29.9 bits (64), Expect = 7.8
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = +3
Query: 420 DSVRRQTDSGRLHEDTGDKFGPEIMVAPNSEAPSNPRIVSSTQESPSAAEARHSA 584
D +R T G L GD G + P ++ N + TQE P A A+HS+
Sbjct: 157 DGQQRATQQGSLRTLLGDGVGRQ---QPRAKQVCNVEVGLQTQERPPAMAAKHSS 208
>BC036895-1|AAH36895.1| 608|Homo sapiens AFF3 protein protein.
Length = 608
Score = 29.9 bits (64), Expect = 7.8
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = +3
Query: 420 DSVRRQTDSGRLHEDTGDKFGPEIMVAPNSEAPSNPRIVSSTQESPSAAEARHSA 584
D +R T G L GD G + P ++ N + TQE P A A+HS+
Sbjct: 157 DGQQRATQQGSLRTLLGDGVGRQ---QPRAKQVCNVEVGLQTQERPPAMAAKHSS 208
>AK127721-1|BAC87100.1| 733|Homo sapiens protein ( Homo sapiens
cDNA FLJ45821 fis, clone NT2RP8001584. ).
Length = 733
Score = 29.9 bits (64), Expect = 7.8
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = -3
Query: 421 SYHLPPHNHTLHTRIRHFKSKH*SFEHKTT 332
S+H PH+ T H I H S H S H TT
Sbjct: 620 SHHSTPHHTTPHCTIPHHISPHHSTPHHTT 649
>AK092327-1|BAC03864.1| 781|Homo sapiens protein ( Homo sapiens
cDNA FLJ35008 fis, clone OCBBF2012191, highly similar to
LAF-4 PROTEIN. ).
Length = 781
Score = 29.9 bits (64), Expect = 7.8
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = +3
Query: 420 DSVRRQTDSGRLHEDTGDKFGPEIMVAPNSEAPSNPRIVSSTQESPSAAEARHSA 584
D +R T G L GD G + P ++ N + TQE P A A+HS+
Sbjct: 182 DGQQRATQQGSLRTLLGDGVGRQ---QPRAKQVCNVEVGLQTQERPPAMAAKHSS 233
>AC092667-1|AAY24278.1| 291|Homo sapiens unknown protein.
Length = 291
Score = 29.9 bits (64), Expect = 7.8
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = +3
Query: 420 DSVRRQTDSGRLHEDTGDKFGPEIMVAPNSEAPSNPRIVSSTQESPSAAEARHSA 584
D +R T G L GD G + P ++ N + TQE P A A+HS+
Sbjct: 157 DGQQRATQQGSLRTLLGDGVGRQ---QPRAKQVCNVEVGLQTQERPPAMAAKHSS 208
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,058,891
Number of Sequences: 237096
Number of extensions: 1541699
Number of successful extensions: 3379
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3232
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3379
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6916500330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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